mobilize-hdfs 1.351 → 1.361
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- data/README.md +3 -233
- data/lib/mobilize-hdfs.rb +3 -0
- data/lib/mobilize-hdfs/handlers/hdfs.rb +1 -11
- data/lib/mobilize-hdfs/tasks.rb +3 -2
- data/lib/mobilize-hdfs/version.rb +1 -1
- data/mobilize-hdfs.gemspec +1 -1
- data/test/fixtures/hdfs1.in.yml +91 -0
- data/test/fixtures/integration_expected.yml +17 -0
- data/test/fixtures/integration_jobs.yml +10 -0
- data/test/integration/mobilize-hdfs_test.rb +42 -0
- data/test/test_helper.rb +1 -0
- metadata +14 -10
- data/test/hdfs_job_rows.yml +0 -10
- data/test/mobilize-hdfs_test.rb +0 -70
data/README.md
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Mobilize
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Mobilize
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========
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* read, write, and copy hdfs files through Google
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Spreadsheets.
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Table Of Contents
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-----------------
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* [Overview](#section_Overview)
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* [Install](#section_Install)
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* [Mobilize-Hdfs](#section_Install_Mobilize-Hdfs)
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* [Install Dirs and Files](#section_Install_Dirs_and_Files)
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* [Configure](#section_Configure)
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* [Hadoop](#section_Configure_Hadoop)
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* [Start](#section_Start)
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* [Create Job](#section_Start_Create_Job)
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* [Run Test](#section_Start_Run_Test)
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* [Meta](#section_Meta)
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* [Author](#section_Author)
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<a name='section_Overview'></a>
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Overview
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-----------
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* Mobilize-hdfs adds Hdfs methods to mobilize-ssh.
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<a name='section_Install'></a>
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Install
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------------
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Make sure you go through all the steps in the
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[mobilize-base][mobilize-base] and [mobilize-ssh][mobilize-ssh]
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install sections first.
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<a name='section_Install_Mobilize-Hdfs'></a>
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### Mobilize-Hdfs
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add this to your Gemfile:
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``` ruby
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gem "mobilize-hdfs"
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```
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or do
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$ gem install mobilize-hdfs
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for a ruby-wide install.
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<a name='section_Install_Dirs_and_Files'></a>
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### Dirs and Files
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### Rakefile
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Inside the Rakefile in your project's root dir, make sure you have:
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``` ruby
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require 'mobilize-base/tasks'
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require 'mobilize-ssh/tasks'
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require 'mobilize-hdfs/tasks'
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```
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This defines rake tasks essential to run the environment.
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### Config Dir
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run
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$ rake mobilize_hdfs:setup
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This will copy over a sample hadoop.yml to your config dir.
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<a name='section_Configure'></a>
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Configure
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------------
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<a name='section_Configure_Hadoop'></a>
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### Configure Hadoop
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* Hadoop is big data. That means we need to be careful when reading from
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the cluster as it could easily fill up our mongodb instance, RAM, local disk
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space, etc.
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* To achieve this, all hadoop operations, stage outputs, etc. are
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executed and stored on the cluster only.
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* The exceptions are:
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* writing to the cluster from an external source, such as a google
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sheet. Here there
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is no risk as the external source has much more strict size limits than
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hdfs.
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* reading from the cluster, such as for posting to google sheet. In
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this case, the read_limit parameter dictates the maximum amount that can
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be read. If the data is bigger than the read limit, an exception will be
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raised.
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The Hadoop configuration consists of:
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* output_dir, which is the absolute path to the directory in HDFS that will store stage
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outputs. Directory names should end with a slash (/). It will choose the
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first cluster as the default cluster to write to.
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* read_limit, which is the maximum size data that can be read from the
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cluster. Default is 1GB.
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* clusters - this defines aliases for clusters, which are used as
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parameters for Hdfs stages. Cluster aliases contain 5 parameters:
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* namenode - defines the name and port for accessing the namenode
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* name - namenode full name, as in namenode1.host.com
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* port - namenode port, by default 50070
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* gateway_node - defines the node that executes the cluster commands.
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* exec_path - defines the path to the hadoop
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This node must be defined in ssh.yml according to the specs in
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[mobilize-ssh][mobilize-ssh]. The gateway node can be the same for
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multiple clusters, depending on your cluster setup.
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Sample hadoop.yml:
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``` yml
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---
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development:
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output_dir: /user/mobilize/development/
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read_limit: 1000000000
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clusters:
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dev_cluster:
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namenode:
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name: dev_namenode.host.com
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port: 50070
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gateway_node: dev_hadoop_host
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exec_path: /path/to/hadoop
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dev_cluster_2:
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namenode:
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name: dev_namenode_2.host.com
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port: 50070
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gateway_node: dev_hadoop_host
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exec_path: /path/to/hadoop
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test:
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output_dir: /user/mobilize/test/
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read_limit: 1000000000
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clusters:
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test_cluster:
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namenode:
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name: test_namenode.host.com
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port: 50070
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gateway_node: test_hadoop_host
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exec_path: /path/to/hadoop
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test_cluster_2:
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namenode:
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name: test_namenode_2.host.com
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port: 50070
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gateway_node: test_hadoop_host
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exec_path: /path/to/hadoop
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production:
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output_dir: /user/mobilize/production/
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read_limit: 1000000000
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clusters:
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prod_cluster:
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namenode:
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name: prod_namenode.host.com
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port: 50070
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gateway_node: prod_hadoop_host
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exec_path: /path/to/hadoop
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prod_cluster_2:
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namenode:
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name: prod_namenode_2.host.com
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port: 50070
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gateway_node: prod_hadoop_host
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exec_path: /path/to/hadoop
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```
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<a name='section_Start'></a>
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Start
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-----
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<a name='section_Start_Create_Job'></a>
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### Create Job
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* For mobilize-hdfs, the following stages are available.
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* cluster and user are optional for all of the below.
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* cluster defaults to output_cluster;
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* user is treated the same way as in [mobilize-ssh][mobilize-ssh].
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* hdfs.write `source:<full_path>, target:<hdfs_full_path>, user:<user>`
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* The full_path can use `<gsheet_path>` or `<hdfs_path>`. The test uses "test_hdfs_1.in".
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* `<hdfs_path>` is the cluster alias followed by absolute path on the cluster.
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* if a full path is supplied without a preceding cluster alias (e.g. "/user/mobilize/test/test_hdfs_1.in"),
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the first listed cluster will be used as the default.
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* The test uses "/user/mobilize/test/test_hdfs_1.in" for the initial
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write, then "test_cluster_2/user/mobilize/test/test_hdfs_copy.out" for
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the cross-cluster write.
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* both cluster arguments and user are optional. If writing from
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one cluster to another, your source_cluster gateway_node must be able to
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access both clusters.
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<a name='section_Start_Run_Test'></a>
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### Run Test
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To run tests, you will need to
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1) go through the [mobilize-base][mobilize-base] and [mobilize-ssh][mobilize-ssh] tests first
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2) clone the mobilize-hdfs repository
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From the project folder, run
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3) $ rake mobilize_hdfs:setup
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Copy over the config files from the mobilize-base and mobilize-ssh
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projects into the config dir, and populate the values in the hadoop.yml file.
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If you don't have two clusters, you can populate test_cluster_2 with the
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same cluster as your first.
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3) $ rake test
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* The test runs a 3 stage job:
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* test_hdfs_1:
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* `hdfs.write target:"/user/mobilize/test/test_hdfs_1.out", source:"test_hdfs_1.in"`
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* `hdfs.write source:"/user/mobilize/test/test_hdfs_1.out",target:"test_cluster_2/user/mobilize/test/test_hdfs_1_copy.out"`
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* `gsheet.write source:"hdfs://test_cluster_2/user/mobilize/test/test_hdfs_1_copy.out", target:"test_hdfs_1_copy.out"`
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* at the end of the test, there should be a sheet named "test_hdfs_1_copy.out" with the same data as test_hdfs_1.in
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<a name='section_Meta'></a>
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Meta
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----
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* Code: `git clone git://github.com/dena/mobilize-hdfs.git`
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* Home: <https://github.com/dena/mobilize-hdfs>
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* Bugs: <https://github.com/dena/mobilize-hdfs/issues>
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* Gems: <http://rubygems.org/gems/mobilize-hdfs>
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<a name='section_Author'></a>
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Author
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------
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Cassio Paes-Leme :: cpaesleme@dena.com :: @cpaesleme
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[mobilize-base]: https://github.com/dena/mobilize-base
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[mobilize-ssh]: https://github.com/dena/mobilize-ssh
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Please refer to the mobilize-server wiki: https://github.com/DeNA/mobilize-server/wiki
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data/lib/mobilize-hdfs.rb
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path = path.starts_with?("/") ? path : "/#{path}"
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end
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url = "hdfs://#{cluster}#{path}"
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begin
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response = Hadoop.run(cluster, "fs -tail '#{hdfs_url}'", user_name)
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if response['exit_code']==0 or is_target
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return "hdfs://#{cluster}#{path}"
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else
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raise "Unable to find #{url} with error: #{response['stderr']}"
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end
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rescue => exc
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raise Exception, "Unable to find #{url} with error: #{exc.to_s}", exc.backtrace
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end
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return url
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end
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def Hdfs.user_name_by_stage_path(stage_path,cluster=nil)
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data/lib/mobilize-hdfs/tasks.rb
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require 'yaml'
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namespace :mobilize do
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desc "Set up config and log folders and files"
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task :
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task :setup_hdfs do
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sample_dir = File.dirname(__FILE__) + '/../samples/'
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sample_files = Dir.entries(sample_dir)
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config_dir = (ENV['MOBILIZE_CONFIG_DIR'] ||= "config/mobilize/")
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data/mobilize-hdfs.gemspec
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gem.executables = gem.files.grep(%r{^bin/}).map{ |f| File.basename(f) }
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gem.test_files = gem.files.grep(%r{^(test|spec|features)/})
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gem.require_paths = ["lib"]
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gem.add_runtime_dependency "mobilize-ssh","1.
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gem.add_runtime_dependency "mobilize-ssh","1.361"
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end
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---
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- test0: test0
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test1: test1
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test2: test2
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test3: test3
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test4: test4
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test5: test5
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test6: test6
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test7: test7
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test8: test8
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test9: test9
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test1: test1
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test2: test2
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test3: test3
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test4: test4
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test5: test5
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test6: test6
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test7: test7
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test8: test8
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test9: test9
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test1: test1
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test2: test2
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test3: test3
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test4: test4
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test5: test5
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test6: test6
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test7: test7
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test8: test8
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test9: test9
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- test0: test0
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test1: test1
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test2: test2
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test3: test3
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test4: test4
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test5: test5
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test6: test6
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test7: test7
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test8: test8
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test9: test9
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- test0: test0
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test1: test1
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test2: test2
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test3: test3
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test4: test4
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test5: test5
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test6: test6
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test7: test7
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test8: test8
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test9: test9
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- test0: test0
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test1: test1
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test2: test2
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test3: test3
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test4: test4
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test5: test5
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test6: test6
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test7: test7
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test8: test8
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test9: test9
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test1: test1
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test2: test2
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test3: test3
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test4: test4
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test5: test5
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test6: test6
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test7: test7
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test8: test8
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test9: test9
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test1: test1
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test2: test2
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test3: test3
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test4: test4
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test5: test5
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test6: test6
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test7: test7
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test8: test8
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test9: test9
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- test0: test0
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test1: test1
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test2: test2
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test3: test3
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test4: test4
|
87
|
+
test5: test5
|
88
|
+
test6: test6
|
89
|
+
test7: test7
|
90
|
+
test8: test8
|
91
|
+
test9: test9
|
@@ -0,0 +1,17 @@
|
|
1
|
+
---
|
2
|
+
- path: "Runner_mobilize(test)/jobs"
|
3
|
+
state: working
|
4
|
+
count: 1
|
5
|
+
confirmed_ats: []
|
6
|
+
- path: "Runner_mobilize(test)/jobs/hdfs1/stage1"
|
7
|
+
state: working
|
8
|
+
count: 1
|
9
|
+
confirmed_ats: []
|
10
|
+
- path: "Runner_mobilize(test)/jobs/hdfs1/stage2"
|
11
|
+
state: working
|
12
|
+
count: 1
|
13
|
+
confirmed_ats: []
|
14
|
+
- path: "Runner_mobilize(test)/jobs/hdfs1/stage3"
|
15
|
+
state: working
|
16
|
+
count: 1
|
17
|
+
confirmed_ats: []
|
@@ -0,0 +1,10 @@
|
|
1
|
+
- name: hdfs1
|
2
|
+
active: true
|
3
|
+
trigger: once
|
4
|
+
status: ""
|
5
|
+
stage1: hdfs.write target:"/user/mobilize/test/hdfs1.out",
|
6
|
+
source:"hdfs1.in"
|
7
|
+
stage2: hdfs.write source:"/user/mobilize/test/hdfs1.out",
|
8
|
+
target:"test_cluster_2/user/mobilize/test/hdfs1_copy.out",
|
9
|
+
stage3: gsheet.write source:"hdfs://test_cluster_2/user/mobilize/test/hdfs1_copy.out",
|
10
|
+
target:"Runner_mobilize(test)/hdfs1_copy.out"
|
@@ -0,0 +1,42 @@
|
|
1
|
+
require 'test_helper'
|
2
|
+
describe "Mobilize" do
|
3
|
+
# enqueues 4 workers on Resque
|
4
|
+
it "runs integration test" do
|
5
|
+
|
6
|
+
puts "restart workers"
|
7
|
+
Mobilize::Jobtracker.restart_workers!
|
8
|
+
|
9
|
+
u = TestHelper.owner_user
|
10
|
+
r = u.runner
|
11
|
+
user_name = u.name
|
12
|
+
gdrive_slot = u.email
|
13
|
+
|
14
|
+
puts "add test data"
|
15
|
+
["hdfs1.in"].each do |fixture_name|
|
16
|
+
target_url = "gsheet://#{r.title}/#{fixture_name}"
|
17
|
+
TestHelper.write_fixture(fixture_name, target_url, 'replace')
|
18
|
+
end
|
19
|
+
|
20
|
+
puts "add/update jobs"
|
21
|
+
u.jobs.each{|j| j.delete}
|
22
|
+
jobs_fixture_name = "integration_jobs"
|
23
|
+
jobs_target_url = "gsheet://#{r.title}/jobs"
|
24
|
+
TestHelper.write_fixture(jobs_fixture_name, jobs_target_url, 'update')
|
25
|
+
|
26
|
+
puts "job rows added, force enqueue runner, wait for stages"
|
27
|
+
#wait for stages to complete
|
28
|
+
expected_fixture_name = "integration_expected"
|
29
|
+
Mobilize::Jobtracker.stop!
|
30
|
+
r.enqueue!
|
31
|
+
TestHelper.confirm_expected_jobs(expected_fixture_name)
|
32
|
+
|
33
|
+
puts "update job status and activity"
|
34
|
+
r.update_gsheet(gdrive_slot)
|
35
|
+
|
36
|
+
puts "check posted data"
|
37
|
+
['hdfs1_copy.out'].each do |out_name|
|
38
|
+
url = "gsheet://#{r.title}/#{out_name}"
|
39
|
+
assert TestHelper.check_output(url, 'min_length' => 599) == true
|
40
|
+
end
|
41
|
+
end
|
42
|
+
end
|
data/test/test_helper.rb
CHANGED
metadata
CHANGED
@@ -1,7 +1,7 @@
|
|
1
1
|
--- !ruby/object:Gem::Specification
|
2
2
|
name: mobilize-hdfs
|
3
3
|
version: !ruby/object:Gem::Version
|
4
|
-
version: '1.
|
4
|
+
version: '1.361'
|
5
5
|
prerelease:
|
6
6
|
platform: ruby
|
7
7
|
authors:
|
@@ -9,7 +9,7 @@ authors:
|
|
9
9
|
autorequire:
|
10
10
|
bindir: bin
|
11
11
|
cert_chain: []
|
12
|
-
date: 2013-
|
12
|
+
date: 2013-05-31 00:00:00.000000000 Z
|
13
13
|
dependencies:
|
14
14
|
- !ruby/object:Gem::Dependency
|
15
15
|
name: mobilize-ssh
|
@@ -18,7 +18,7 @@ dependencies:
|
|
18
18
|
requirements:
|
19
19
|
- - '='
|
20
20
|
- !ruby/object:Gem::Version
|
21
|
-
version: '1.
|
21
|
+
version: '1.361'
|
22
22
|
type: :runtime
|
23
23
|
prerelease: false
|
24
24
|
version_requirements: !ruby/object:Gem::Requirement
|
@@ -26,7 +26,7 @@ dependencies:
|
|
26
26
|
requirements:
|
27
27
|
- - '='
|
28
28
|
- !ruby/object:Gem::Version
|
29
|
-
version: '1.
|
29
|
+
version: '1.361'
|
30
30
|
description: Adds hdfs read, write, and copy support to mobilize-ssh
|
31
31
|
email:
|
32
32
|
- cpaesleme@dena.com
|
@@ -46,8 +46,10 @@ files:
|
|
46
46
|
- lib/mobilize-hdfs/version.rb
|
47
47
|
- lib/samples/hadoop.yml
|
48
48
|
- mobilize-hdfs.gemspec
|
49
|
-
- test/
|
50
|
-
- test/
|
49
|
+
- test/fixtures/hdfs1.in.yml
|
50
|
+
- test/fixtures/integration_expected.yml
|
51
|
+
- test/fixtures/integration_jobs.yml
|
52
|
+
- test/integration/mobilize-hdfs_test.rb
|
51
53
|
- test/redis-test.conf
|
52
54
|
- test/test_helper.rb
|
53
55
|
homepage: http://github.com/dena/mobilize-hdfs
|
@@ -64,7 +66,7 @@ required_ruby_version: !ruby/object:Gem::Requirement
|
|
64
66
|
version: '0'
|
65
67
|
segments:
|
66
68
|
- 0
|
67
|
-
hash:
|
69
|
+
hash: 2190980204946063989
|
68
70
|
required_rubygems_version: !ruby/object:Gem::Requirement
|
69
71
|
none: false
|
70
72
|
requirements:
|
@@ -73,7 +75,7 @@ required_rubygems_version: !ruby/object:Gem::Requirement
|
|
73
75
|
version: '0'
|
74
76
|
segments:
|
75
77
|
- 0
|
76
|
-
hash:
|
78
|
+
hash: 2190980204946063989
|
77
79
|
requirements: []
|
78
80
|
rubyforge_project:
|
79
81
|
rubygems_version: 1.8.25
|
@@ -81,7 +83,9 @@ signing_key:
|
|
81
83
|
specification_version: 3
|
82
84
|
summary: Adds hdfs read, write, and copy support to mobilize-ssh
|
83
85
|
test_files:
|
84
|
-
- test/
|
85
|
-
- test/
|
86
|
+
- test/fixtures/hdfs1.in.yml
|
87
|
+
- test/fixtures/integration_expected.yml
|
88
|
+
- test/fixtures/integration_jobs.yml
|
89
|
+
- test/integration/mobilize-hdfs_test.rb
|
86
90
|
- test/redis-test.conf
|
87
91
|
- test/test_helper.rb
|
data/test/hdfs_job_rows.yml
DELETED
@@ -1,10 +0,0 @@
|
|
1
|
-
- name: test_hdfs_1
|
2
|
-
active: true
|
3
|
-
trigger: once
|
4
|
-
status: ""
|
5
|
-
stage1: hdfs.write target:"/user/mobilize/test/test_hdfs_1.out",
|
6
|
-
source:"test_hdfs_1.in"
|
7
|
-
stage2: hdfs.write source:"/user/mobilize/test/test_hdfs_1.out",
|
8
|
-
target:"test_cluster_2/user/mobilize/test/test_hdfs_1_copy.out",
|
9
|
-
stage3: gsheet.write source:"hdfs://test_cluster_2/user/mobilize/test/test_hdfs_1_copy.out",
|
10
|
-
target:"Runner_mobilize(test)/test_hdfs_1_copy.out"
|
data/test/mobilize-hdfs_test.rb
DELETED
@@ -1,70 +0,0 @@
|
|
1
|
-
require 'test_helper'
|
2
|
-
|
3
|
-
describe "Mobilize" do
|
4
|
-
|
5
|
-
def before
|
6
|
-
puts 'nothing before'
|
7
|
-
end
|
8
|
-
|
9
|
-
# enqueues 4 workers on Resque
|
10
|
-
it "runs integration test" do
|
11
|
-
|
12
|
-
puts "restart workers"
|
13
|
-
Mobilize::Jobtracker.restart_workers!
|
14
|
-
|
15
|
-
gdrive_slot = Mobilize::Gdrive.owner_email
|
16
|
-
puts "create user 'mobilize'"
|
17
|
-
user_name = gdrive_slot.split("@").first
|
18
|
-
u = Mobilize::User.where(:name=>user_name).first
|
19
|
-
r = u.runner
|
20
|
-
hdfs_1_sheet = Mobilize::Gsheet.find_by_path("#{r.path.split("/")[0..-2].join("/")}/test_hdfs_1.in",gdrive_slot)
|
21
|
-
[hdfs_1_sheet].each {|s| s.delete if s}
|
22
|
-
|
23
|
-
puts "add test_source data"
|
24
|
-
hdfs_1_sheet = Mobilize::Gsheet.find_or_create_by_path("#{r.path.split("/")[0..-2].join("/")}/test_hdfs_1.in",gdrive_slot)
|
25
|
-
hdfs_1_tsv = ([%w{test0 test1 test2 test3 test4 test5 test6 test7 test8 test9}.join("\t")]*10).join("\n")
|
26
|
-
hdfs_1_sheet.write(hdfs_1_tsv,u.name)
|
27
|
-
|
28
|
-
jobs_sheet = r.gsheet(gdrive_slot)
|
29
|
-
|
30
|
-
test_job_rows = ::YAML.load_file("#{Mobilize::Base.root}/test/hdfs_job_rows.yml")
|
31
|
-
test_job_rows.map{|j| r.jobs(j['name'])}.each{|j| j.delete if j}
|
32
|
-
jobs_sheet.add_or_update_rows(test_job_rows)
|
33
|
-
|
34
|
-
hdfs_1_target_sheet = Mobilize::Gsheet.find_by_path("#{r.path.split("/")[0..-2].join("/")}/test_hdfs_1_copy.out",gdrive_slot)
|
35
|
-
[hdfs_1_target_sheet].each {|s| s.delete if s}
|
36
|
-
|
37
|
-
puts "job row added, force enqueued requestor, wait for stages"
|
38
|
-
r.enqueue!
|
39
|
-
wait_for_stages
|
40
|
-
|
41
|
-
puts "jobtracker posted data to test sheet"
|
42
|
-
test_destination_sheet = Mobilize::Gsheet.find_by_path("#{r.path.split("/")[0..-2].join("/")}/test_hdfs_1_copy.out",gdrive_slot)
|
43
|
-
|
44
|
-
assert test_destination_sheet.read(u.name).length == 599
|
45
|
-
end
|
46
|
-
|
47
|
-
def wait_for_stages(time_limit=600,stage_limit=120,wait_length=10)
|
48
|
-
time = 0
|
49
|
-
time_since_stage = 0
|
50
|
-
#check for 10 min
|
51
|
-
while time < time_limit and time_since_stage < stage_limit
|
52
|
-
sleep wait_length
|
53
|
-
job_classes = Mobilize::Resque.jobs.map{|j| j['class']}
|
54
|
-
if job_classes.include?("Mobilize::Stage")
|
55
|
-
time_since_stage = 0
|
56
|
-
puts "saw stage at #{time.to_s} seconds"
|
57
|
-
else
|
58
|
-
time_since_stage += wait_length
|
59
|
-
puts "#{time_since_stage.to_s} seconds since stage seen"
|
60
|
-
end
|
61
|
-
time += wait_length
|
62
|
-
puts "total wait time #{time.to_s} seconds"
|
63
|
-
end
|
64
|
-
|
65
|
-
if time >= time_limit
|
66
|
-
raise "Timed out before stage completion"
|
67
|
-
end
|
68
|
-
end
|
69
|
-
|
70
|
-
end
|