moab-versioning 4.2.1 → 4.4.2
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- checksums.yaml +5 -5
- data/lib/moab.rb +3 -2
- data/lib/moab/bagger.rb +25 -20
- data/lib/moab/config.rb +39 -8
- data/lib/moab/deposit_bag_validator.rb +22 -17
- data/lib/moab/exceptions.rb +10 -8
- data/lib/moab/file_group.rb +23 -22
- data/lib/moab/file_group_difference.rb +35 -35
- data/lib/moab/file_group_difference_subset.rb +5 -5
- data/lib/moab/file_instance.rb +4 -3
- data/lib/moab/file_instance_difference.rb +5 -5
- data/lib/moab/file_inventory.rb +25 -31
- data/lib/moab/file_inventory_difference.rb +11 -11
- data/lib/moab/file_manifestation.rb +8 -7
- data/lib/moab/file_signature.rb +35 -41
- data/lib/moab/signature_catalog.rb +19 -21
- data/lib/moab/signature_catalog_entry.rb +5 -5
- data/lib/moab/stanford.rb +2 -0
- data/lib/moab/storage_object.rb +23 -24
- data/lib/moab/storage_object_validator.rb +44 -16
- data/lib/moab/storage_object_version.rb +45 -40
- data/lib/moab/storage_repository.rb +59 -24
- data/lib/moab/storage_services.rb +17 -10
- data/lib/moab/utc_time.rb +3 -3
- data/lib/moab/verification_result.rb +3 -4
- data/lib/moab/version_metadata.rb +4 -4
- data/lib/moab/version_metadata_entry.rb +6 -6
- data/lib/moab/version_metadata_event.rb +1 -1
- data/lib/serializer.rb +2 -0
- data/lib/serializer/manifest.rb +9 -7
- data/lib/serializer/serializable.rb +41 -35
- data/lib/stanford/active_fedora_object.rb +1 -1
- data/lib/stanford/content_inventory.rb +40 -34
- data/lib/stanford/dor_metadata.rb +4 -3
- data/lib/stanford/moab_storage_directory.rb +4 -2
- data/lib/stanford/storage_object_validator.rb +1 -1
- data/lib/stanford/storage_repository.rb +9 -6
- data/lib/stanford/storage_services.rb +6 -6
- metadata +23 -38
@@ -1,4 +1,4 @@
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-
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+
# frozen_string_literal: true
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module Stanford
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# Stanford-specific utility methods for interfacing with DOR metadata files
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@@ -31,11 +31,12 @@ module Stanford
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# @return [FileInventory] Inventory of the files under the specified directory
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def inventory_from_directory(directory, version_id = nil)
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version_id ||= @version_id
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-
version_inventory = Moab::FileInventory.new(type: 'version', digital_object_id: @digital_object_id,
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+
version_inventory = Moab::FileInventory.new(type: 'version', digital_object_id: @digital_object_id,
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+
version_id: version_id)
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content_metadata = IO.read(File.join(directory, 'contentMetadata.xml'))
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content_group = Stanford::ContentInventory.new.group_from_cm(content_metadata, 'preserve')
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version_inventory.groups << content_group
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38
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-
metadata_group = Moab::FileGroup.new(:
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39
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+
metadata_group = Moab::FileGroup.new(group_id: 'metadata').group_from_directory(directory)
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version_inventory.groups << metadata_group
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version_inventory
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end
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@@ -1,11 +1,13 @@
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+
# frozen_string_literal: true
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require 'find'
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module Stanford
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##
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# methods for dealing with a directory which stores Moab objects
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class MoabStorageDirectory
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7
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-
DRUID_TREE_REGEXP = '[[:lower:]]{2}/\\d{3}/[[:lower:]]{2}/\\d{4}'
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8
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-
DRUID_REGEXP = '[[:lower:]]{2}\\d{3}[[:lower:]]{2}\\d{4}'
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9
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+
DRUID_TREE_REGEXP = '[[:lower:]]{2}/\\d{3}/[[:lower:]]{2}/\\d{4}'
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+
DRUID_REGEXP = '[[:lower:]]{2}\\d{3}[[:lower:]]{2}\\d{4}'
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9
11
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def self.find_moab_paths(storage_dir)
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Find.find(storage_dir) do |path|
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@@ -1,4 +1,5 @@
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-
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+
# frozen_string_literal: true
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+
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require 'druid-tools'
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4
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module Stanford
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@@ -22,7 +23,7 @@ module Stanford
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end
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# @param object_id [String] The identifier of the digital object
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25
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-
# @return [
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+
# @return [String] The branch segment of the object deposit path
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def deposit_branch(object_id)
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object_id.split(/:/)[-1]
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end
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@@ -30,12 +31,14 @@ module Stanford
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# @param object_id [String] The identifier of the digital object whose path is requested
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# @return [String] the druid tree directory path based on the given object identifier.
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def druid_tree(object_id)
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-
#
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34
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+
# NOTE: this seems an odd place to do druid validation, but leaving it here for now
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syntax_msg = "Identifier has invalid suri syntax: #{object_id}"
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35
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-
raise syntax_msg
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36
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+
raise(Moab::InvalidSuriSyntaxError, "#{syntax_msg} nil or empty") if object_id.to_s.empty?
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+
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identifier = object_id.split(':')[-1]
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37
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-
raise syntax_msg if identifier.to_s.empty?
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38
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-
raise syntax_msg unless DruidTools::Druid.valid?(identifier, true)
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39
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+
raise(Moab::InvalidSuriSyntaxError, syntax_msg) if identifier.to_s.empty?
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40
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+
raise(Moab::InvalidSuriSyntaxError, syntax_msg) unless DruidTools::Druid.valid?(identifier, true)
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41
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+
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39
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DruidTools::Druid.new(identifier, true).tree.join(File::SEPARATOR)
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40
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end
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end
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@@ -1,4 +1,4 @@
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1
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-
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1
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+
# frozen_string_literal: true
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2
2
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3
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module Stanford
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4
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# An interface class to support access to SDR storage via a RESTful server
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@@ -17,9 +17,9 @@ module Stanford
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new_inventory = Stanford::ContentInventory.new.inventory_from_cm(new_content_metadata, object_id, subset)
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begin
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# ObjectNotFoundException is raised if the object does not exist in storage
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-
base_version ||=
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+
base_version ||= current_version(object_id)
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# FileNotFoundException is raised if object exists but has no contentMetadata file
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-
base_cm_pathname =
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+
base_cm_pathname = retrieve_file('metadata', 'contentMetadata.xml', object_id, base_version)
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base_inventory = Stanford::ContentInventory.new.inventory_from_cm(base_cm_pathname.read, object_id, subset, base_version)
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rescue Moab::ObjectNotFoundException, Moab::FileNotFoundException
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# Create a skeletal FileInventory object, containing no file entries
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@@ -41,7 +41,7 @@ module Stanford
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new_inventory = Stanford::ContentInventory.new.inventory_from_cm(new_content_metadata, object_id, 'preserve')
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begin
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# ObjectNotFoundException is raised if the object does not exist in storage
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-
version_id ||=
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+
version_id ||= current_version(object_id)
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storage_object_version = @@repository.storage_object(object_id).find_object_version(version_id)
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signature_catalog = storage_object_version.signature_catalog
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rescue Moab::ObjectNotFoundException
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@@ -56,8 +56,8 @@ module Stanford
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# @param version_id [Integer] The ID of the version whose file data is to be used, if nil use latest version
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# @return [String] Returns a remediated copy of the contentMetadata with fixity data filled in
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def self.cm_remediate(object_id, version_id = nil)
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cm =
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-
group =
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cm = retrieve_file('metadata', 'contentMetadata.xml', object_id, version_id)
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group = retrieve_file_group('content', object_id, version_id)
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Stanford::ContentInventory.new.remediate_content_metadata(cm, group)
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end
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end
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metadata
CHANGED
@@ -1,34 +1,34 @@
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1
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--- !ruby/object:Gem::Specification
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name: moab-versioning
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version: !ruby/object:Gem::Version
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-
version: 4.2
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+
version: 4.4.2
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platform: ruby
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authors:
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- Darren Weber
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- Richard Anderson
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- Lynn McRae
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- Hannah Frost
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-
autorequire:
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+
autorequire:
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bindir: bin
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cert_chain: []
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-
date:
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+
date: 2021-06-01 00:00:00.000000000 Z
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dependencies:
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- !ruby/object:Gem::Dependency
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-
name:
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+
name: druid-tools
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requirement: !ruby/object:Gem::Requirement
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requirements:
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- - ">="
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- !ruby/object:Gem::Version
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version:
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+
version: 1.0.0
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type: :runtime
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prerelease: false
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version_requirements: !ruby/object:Gem::Requirement
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requirements:
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- - ">="
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- !ruby/object:Gem::Version
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-
version:
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+
version: 1.0.0
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- !ruby/object:Gem::Dependency
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name:
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+
name: json
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requirement: !ruby/object:Gem::Requirement
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requirements:
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- - ">="
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@@ -42,7 +42,7 @@ dependencies:
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- !ruby/object:Gem::Version
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version: '0'
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- !ruby/object:Gem::Dependency
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name: nokogiri
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+
name: nokogiri
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requirement: !ruby/object:Gem::Requirement
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requirements:
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- - ">="
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@@ -56,7 +56,7 @@ dependencies:
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- !ruby/object:Gem::Version
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version: '0'
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- !ruby/object:Gem::Dependency
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name:
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+
name: nokogiri-happymapper
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requirement: !ruby/object:Gem::Requirement
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requirements:
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- - ">="
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@@ -70,21 +70,7 @@ dependencies:
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- !ruby/object:Gem::Version
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version: '0'
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72
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- !ruby/object:Gem::Dependency
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name:
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requirement: !ruby/object:Gem::Requirement
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-
requirements:
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-
- - ">="
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-
- !ruby/object:Gem::Version
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-
version: 1.0.0
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type: :runtime
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-
prerelease: false
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-
version_requirements: !ruby/object:Gem::Requirement
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requirements:
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-
- - ">="
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-
- !ruby/object:Gem::Version
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-
version: 1.0.0
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-
- !ruby/object:Gem::Dependency
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-
name: equivalent-xml
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+
name: coveralls
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requirement: !ruby/object:Gem::Requirement
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requirements:
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- - ">="
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@@ -98,7 +84,7 @@ dependencies:
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- !ruby/object:Gem::Version
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version: '0'
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86
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- !ruby/object:Gem::Dependency
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-
name:
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+
name: equivalent-xml
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88
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requirement: !ruby/object:Gem::Requirement
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requirements:
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90
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- - ">="
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@@ -112,7 +98,7 @@ dependencies:
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112
98
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- !ruby/object:Gem::Version
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version: '0'
|
114
100
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- !ruby/object:Gem::Dependency
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115
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-
name:
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+
name: pry-byebug
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requirement: !ruby/object:Gem::Requirement
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requirements:
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118
104
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- - ">="
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@@ -126,7 +112,7 @@ dependencies:
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126
112
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- !ruby/object:Gem::Version
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version: '0'
|
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114
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- !ruby/object:Gem::Dependency
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-
name:
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+
name: rake
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requirement: !ruby/object:Gem::Requirement
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requirements:
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118
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- - ">="
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@@ -140,7 +126,7 @@ dependencies:
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140
126
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- !ruby/object:Gem::Version
|
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127
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version: '0'
|
142
128
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- !ruby/object:Gem::Dependency
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-
name:
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129
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+
name: rspec
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requirement: !ruby/object:Gem::Requirement
|
145
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requirements:
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146
132
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- - ">="
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@@ -159,28 +145,28 @@ dependencies:
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145
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requirements:
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146
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- - "~>"
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161
147
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- !ruby/object:Gem::Version
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-
version:
|
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+
version: '1.7'
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149
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type: :development
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prerelease: false
|
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version_requirements: !ruby/object:Gem::Requirement
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requirements:
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167
153
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- - "~>"
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168
154
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- !ruby/object:Gem::Version
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169
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-
version:
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155
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+
version: '1.7'
|
170
156
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- !ruby/object:Gem::Dependency
|
171
157
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name: rubocop-rspec
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172
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requirement: !ruby/object:Gem::Requirement
|
173
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requirements:
|
174
160
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- - "~>"
|
175
161
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- !ruby/object:Gem::Version
|
176
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-
version: 1
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162
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+
version: '2.1'
|
177
163
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type: :development
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178
164
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prerelease: false
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179
165
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version_requirements: !ruby/object:Gem::Requirement
|
180
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requirements:
|
181
167
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- - "~>"
|
182
168
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- !ruby/object:Gem::Version
|
183
|
-
version: 1
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169
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+
version: '2.1'
|
184
170
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description: Contains classes to process digital object version content and metadata
|
185
171
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email:
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186
172
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- darren.weber@stanford.edu
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@@ -229,24 +215,23 @@ homepage: https://github.com/sul-dlss/moab-versioning
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licenses:
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230
216
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- Apache-2.0
|
231
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metadata: {}
|
232
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-
post_install_message:
|
218
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+
post_install_message:
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233
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rdoc_options: []
|
234
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require_paths:
|
235
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- lib
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236
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required_ruby_version: !ruby/object:Gem::Requirement
|
237
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requirements:
|
238
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-
- - "
|
224
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+
- - ">="
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239
225
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- !ruby/object:Gem::Version
|
240
|
-
version: '2.
|
226
|
+
version: '2.6'
|
241
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required_rubygems_version: !ruby/object:Gem::Requirement
|
242
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requirements:
|
243
229
|
- - ">="
|
244
230
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- !ruby/object:Gem::Version
|
245
231
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version: '0'
|
246
232
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requirements: []
|
247
|
-
|
248
|
-
|
249
|
-
signing_key:
|
233
|
+
rubygems_version: 3.1.4
|
234
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+
signing_key:
|
250
235
|
specification_version: 4
|
251
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summary: Ruby implementation of digital object versioning toolkit used by the SULAIR
|
252
237
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Digital Library
|