minimap2 0.2.25.0 → 0.2.25.1
This diff represents the content of publicly available package versions that have been released to one of the supported registries. The information contained in this diff is provided for informational purposes only and reflects changes between package versions as they appear in their respective public registries.
- checksums.yaml +4 -4
- data/README.md +2 -3
- data/ext/minimap2/Makefile +6 -2
- data/ext/minimap2/NEWS.md +38 -0
- data/ext/minimap2/README.md +9 -3
- data/ext/minimap2/align.c +5 -3
- data/ext/minimap2/cookbook.md +2 -2
- data/ext/minimap2/format.c +7 -4
- data/ext/minimap2/kalloc.c +20 -1
- data/ext/minimap2/kalloc.h +13 -2
- data/ext/minimap2/ksw2.h +1 -0
- data/ext/minimap2/ksw2_extd2_sse.c +1 -1
- data/ext/minimap2/ksw2_exts2_sse.c +79 -40
- data/ext/minimap2/ksw2_extz2_sse.c +1 -1
- data/ext/minimap2/lchain.c +15 -16
- data/ext/minimap2/lib/simde/CONTRIBUTING.md +114 -0
- data/ext/minimap2/lib/simde/COPYING +20 -0
- data/ext/minimap2/lib/simde/README.md +333 -0
- data/ext/minimap2/lib/simde/amalgamate.py +58 -0
- data/ext/minimap2/lib/simde/meson.build +33 -0
- data/ext/minimap2/lib/simde/netlify.toml +20 -0
- data/ext/minimap2/lib/simde/simde/arm/neon/float32x2.h +140 -0
- data/ext/minimap2/lib/simde/simde/arm/neon/float32x4.h +137 -0
- data/ext/minimap2/lib/simde/simde/arm/neon/float64x1.h +142 -0
- data/ext/minimap2/lib/simde/simde/arm/neon/float64x2.h +145 -0
- data/ext/minimap2/lib/simde/simde/arm/neon/int16x4.h +140 -0
- data/ext/minimap2/lib/simde/simde/arm/neon/int16x8.h +145 -0
- data/ext/minimap2/lib/simde/simde/arm/neon/int32x2.h +140 -0
- data/ext/minimap2/lib/simde/simde/arm/neon/int32x4.h +143 -0
- data/ext/minimap2/lib/simde/simde/arm/neon/int64x1.h +137 -0
- data/ext/minimap2/lib/simde/simde/arm/neon/int64x2.h +141 -0
- data/ext/minimap2/lib/simde/simde/arm/neon/int8x16.h +147 -0
- data/ext/minimap2/lib/simde/simde/arm/neon/int8x8.h +141 -0
- data/ext/minimap2/lib/simde/simde/arm/neon/uint16x4.h +134 -0
- data/ext/minimap2/lib/simde/simde/arm/neon/uint16x8.h +138 -0
- data/ext/minimap2/lib/simde/simde/arm/neon/uint32x2.h +134 -0
- data/ext/minimap2/lib/simde/simde/arm/neon/uint32x4.h +137 -0
- data/ext/minimap2/lib/simde/simde/arm/neon/uint64x1.h +131 -0
- data/ext/minimap2/lib/simde/simde/arm/neon/uint64x2.h +135 -0
- data/ext/minimap2/lib/simde/simde/arm/neon/uint8x16.h +141 -0
- data/ext/minimap2/lib/simde/simde/arm/neon/uint8x8.h +135 -0
- data/ext/minimap2/lib/simde/simde/arm/neon.h +97 -0
- data/ext/minimap2/lib/simde/simde/check.h +267 -0
- data/ext/minimap2/lib/simde/simde/debug-trap.h +83 -0
- data/ext/minimap2/lib/simde/simde/hedley.h +1899 -0
- data/ext/minimap2/lib/simde/simde/simde-arch.h +445 -0
- data/ext/minimap2/lib/simde/simde/simde-common.h +697 -0
- data/ext/minimap2/lib/simde/simde/x86/avx.h +5385 -0
- data/ext/minimap2/lib/simde/simde/x86/avx2.h +2402 -0
- data/ext/minimap2/lib/simde/simde/x86/avx512bw.h +391 -0
- data/ext/minimap2/lib/simde/simde/x86/avx512f.h +3389 -0
- data/ext/minimap2/lib/simde/simde/x86/avx512vl.h +112 -0
- data/ext/minimap2/lib/simde/simde/x86/fma.h +659 -0
- data/ext/minimap2/lib/simde/simde/x86/mmx.h +2210 -0
- data/ext/minimap2/lib/simde/simde/x86/sse.h +3696 -0
- data/ext/minimap2/lib/simde/simde/x86/sse2.h +5991 -0
- data/ext/minimap2/lib/simde/simde/x86/sse3.h +343 -0
- data/ext/minimap2/lib/simde/simde/x86/sse4.1.h +1783 -0
- data/ext/minimap2/lib/simde/simde/x86/sse4.2.h +105 -0
- data/ext/minimap2/lib/simde/simde/x86/ssse3.h +1053 -0
- data/ext/minimap2/lib/simde/simde/x86/svml.h +543 -0
- data/ext/minimap2/lib/simde/test/CMakeLists.txt +166 -0
- data/ext/minimap2/lib/simde/test/arm/meson.build +4 -0
- data/ext/minimap2/lib/simde/test/arm/neon/meson.build +23 -0
- data/ext/minimap2/lib/simde/test/arm/neon/skel.c +871 -0
- data/ext/minimap2/lib/simde/test/arm/neon/test-neon-internal.h +134 -0
- data/ext/minimap2/lib/simde/test/arm/neon/test-neon.c +39 -0
- data/ext/minimap2/lib/simde/test/arm/neon/test-neon.h +10 -0
- data/ext/minimap2/lib/simde/test/arm/neon/vadd.c +1260 -0
- data/ext/minimap2/lib/simde/test/arm/neon/vdup_n.c +873 -0
- data/ext/minimap2/lib/simde/test/arm/neon/vmul.c +1084 -0
- data/ext/minimap2/lib/simde/test/arm/neon/vsub.c +1260 -0
- data/ext/minimap2/lib/simde/test/arm/test-arm-internal.h +18 -0
- data/ext/minimap2/lib/simde/test/arm/test-arm.c +20 -0
- data/ext/minimap2/lib/simde/test/arm/test-arm.h +8 -0
- data/ext/minimap2/lib/simde/test/cmake/AddCompilerFlags.cmake +171 -0
- data/ext/minimap2/lib/simde/test/cmake/ExtraWarningFlags.cmake +68 -0
- data/ext/minimap2/lib/simde/test/meson.build +64 -0
- data/ext/minimap2/lib/simde/test/munit/COPYING +21 -0
- data/ext/minimap2/lib/simde/test/munit/Makefile +55 -0
- data/ext/minimap2/lib/simde/test/munit/README.md +54 -0
- data/ext/minimap2/lib/simde/test/munit/example.c +351 -0
- data/ext/minimap2/lib/simde/test/munit/meson.build +37 -0
- data/ext/minimap2/lib/simde/test/munit/munit.c +2055 -0
- data/ext/minimap2/lib/simde/test/munit/munit.h +535 -0
- data/ext/minimap2/lib/simde/test/run-tests.c +20 -0
- data/ext/minimap2/lib/simde/test/run-tests.h +260 -0
- data/ext/minimap2/lib/simde/test/x86/avx.c +13752 -0
- data/ext/minimap2/lib/simde/test/x86/avx2.c +9977 -0
- data/ext/minimap2/lib/simde/test/x86/avx512bw.c +2664 -0
- data/ext/minimap2/lib/simde/test/x86/avx512f.c +10416 -0
- data/ext/minimap2/lib/simde/test/x86/avx512vl.c +210 -0
- data/ext/minimap2/lib/simde/test/x86/fma.c +2557 -0
- data/ext/minimap2/lib/simde/test/x86/meson.build +33 -0
- data/ext/minimap2/lib/simde/test/x86/mmx.c +2878 -0
- data/ext/minimap2/lib/simde/test/x86/skel.c +2984 -0
- data/ext/minimap2/lib/simde/test/x86/sse.c +5121 -0
- data/ext/minimap2/lib/simde/test/x86/sse2.c +9860 -0
- data/ext/minimap2/lib/simde/test/x86/sse3.c +486 -0
- data/ext/minimap2/lib/simde/test/x86/sse4.1.c +3446 -0
- data/ext/minimap2/lib/simde/test/x86/sse4.2.c +101 -0
- data/ext/minimap2/lib/simde/test/x86/ssse3.c +2084 -0
- data/ext/minimap2/lib/simde/test/x86/svml.c +1545 -0
- data/ext/minimap2/lib/simde/test/x86/test-avx.h +16 -0
- data/ext/minimap2/lib/simde/test/x86/test-avx512.h +25 -0
- data/ext/minimap2/lib/simde/test/x86/test-mmx.h +13 -0
- data/ext/minimap2/lib/simde/test/x86/test-sse.h +13 -0
- data/ext/minimap2/lib/simde/test/x86/test-sse2.h +13 -0
- data/ext/minimap2/lib/simde/test/x86/test-x86-internal.h +196 -0
- data/ext/minimap2/lib/simde/test/x86/test-x86.c +48 -0
- data/ext/minimap2/lib/simde/test/x86/test-x86.h +8 -0
- data/ext/minimap2/main.c +13 -6
- data/ext/minimap2/map.c +0 -5
- data/ext/minimap2/minimap.h +40 -31
- data/ext/minimap2/minimap2.1 +19 -5
- data/ext/minimap2/misc/paftools.js +545 -24
- data/ext/minimap2/options.c +1 -1
- data/ext/minimap2/pyproject.toml +2 -0
- data/ext/minimap2/python/mappy.pyx +3 -1
- data/ext/minimap2/seed.c +1 -1
- data/ext/minimap2/setup.py +32 -22
- data/lib/minimap2/version.rb +1 -1
- metadata +100 -3
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/* Permission is hereby granted, free of charge, to any person
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* obtaining a copy of this software and associated documentation
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* files (the "Software"), to deal in the Software without
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* restriction, including without limitation the rights to use, copy,
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* modify, merge, publish, distribute, sublicense, and/or sell copies
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* of the Software, and to permit persons to whom the Software is
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* furnished to do so, subject to the following conditions:
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*
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* The above copyright notice and this permission notice shall be
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* included in all copies or substantial portions of the Software.
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*
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* THE SOFTWARE IS PROVIDED "AS IS", WITHOUT WARRANTY OF ANY KIND,
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* EXPRESS OR IMPLIED, INCLUDING BUT NOT LIMITED TO THE WARRANTIES OF
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* MERCHANTABILITY, FITNESS FOR A PARTICULAR PURPOSE AND
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* NONINFRINGEMENT. IN NO EVENT SHALL THE AUTHORS OR COPYRIGHT HOLDERS
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* BE LIABLE FOR ANY CLAIM, DAMAGES OR OTHER LIABILITY, WHETHER IN AN
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* ACTION OF CONTRACT, TORT OR OTHERWISE, ARISING FROM, OUT OF OR IN
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* CONNECTION WITH THE SOFTWARE OR THE USE OR OTHER DEALINGS IN THE
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* SOFTWARE.
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*
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* Copyright:
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* 2020 Evan Nemerson <evan@nemerson.com>
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*/
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#if !defined(SIMDE__AVX512BW_H)
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# if !defined(SIMDE__AVX512BW_H)
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# define SIMDE__AVX512BW_H
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# endif
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# include "avx512f.h"
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HEDLEY_DIAGNOSTIC_PUSH
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SIMDE_DISABLE_UNWANTED_DIAGNOSTICS
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# if defined(SIMDE_AVX512BW_NATIVE)
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# undef SIMDE_AVX512BW_NATIVE
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# endif
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# if defined(SIMDE_ARCH_X86_AVX512BW) && !defined(SIMDE_AVX512BW_NO_NATIVE) && !defined(SIMDE_NO_NATIVE)
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# define SIMDE_AVX512BW_NATIVE
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# elif defined(SIMDE_ARCH_ARM_NEON) && !defined(SIMDE_AVX512BW_NO_NEON) && !defined(SIMDE_NO_NEON)
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# define SIMDE_AVX512BW_NEON
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# elif defined(SIMDE_ARCH_POWER_ALTIVEC)
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# define SIMDE_AVX512BW_POWER_ALTIVEC
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# endif
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# if defined(SIMDE_AVX512BW_NATIVE)
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# include <immintrin.h>
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# endif
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# if defined(SIMDE_AVX512BW_POWER_ALTIVEC)
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# include <altivec.h>
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# endif
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#if !defined(SIMDE_AVX512BW_NATIVE) && defined(SIMDE_ENABLE_NATIVE_ALIASES)
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#define SIMDE_AVX512BW_ENABLE_NATIVE_ALIASES
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#endif
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SIMDE__BEGIN_DECLS
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SIMDE__FUNCTION_ATTRIBUTES
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simde__m512i
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simde_mm512_add_epi8 (simde__m512i a, simde__m512i b) {
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#if defined(SIMDE_AVX512BW_NATIVE)
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return _mm512_add_epi8(a, b);
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#else
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simde__m512i_private
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r_,
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a_ = simde__m512i_to_private(a),
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b_ = simde__m512i_to_private(b);
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#if defined(SIMDE_VECTOR_SUBSCRIPT_OPS)
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r_.i8 = a_.i8 + b_.i8;
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#else
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SIMDE__VECTORIZE
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for (size_t i = 0 ; i < (sizeof(r_.m256i) / sizeof(r_.m256i[0])) ; i++) {
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r_.m256i[i] = simde_mm256_add_epi8(a_.m256i[i], b_.m256i[i]);
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}
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#endif
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return simde__m512i_from_private(r_);
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#endif
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}
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#if defined(SIMDE_AVX512BW_ENABLE_NATIVE_ALIASES)
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# define _mm512_add_epi8(a, b) simde_mm512_add_epi8(a, b)
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#endif
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SIMDE__FUNCTION_ATTRIBUTES
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simde__m512i
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simde_mm512_add_epi16 (simde__m512i a, simde__m512i b) {
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#if defined(SIMDE_AVX512BW_NATIVE)
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return _mm512_add_epi16(a, b);
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#else
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simde__m512i_private
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r_,
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a_ = simde__m512i_to_private(a),
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b_ = simde__m512i_to_private(b);
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#if defined(SIMDE_VECTOR_SUBSCRIPT_OPS)
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r_.i16 = a_.i16 + b_.i16;
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#else
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SIMDE__VECTORIZE
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for (size_t i = 0 ; i < (sizeof(r_.m256i) / sizeof(r_.m256i[0])) ; i++) {
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r_.m256i[i] = simde_mm256_add_epi16(a_.m256i[i], b_.m256i[i]);
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}
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#endif
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return simde__m512i_from_private(r_);
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#endif
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}
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#if defined(SIMDE_AVX512BW_ENABLE_NATIVE_ALIASES)
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# define _mm512_add_epi16(a, b) simde_mm512_add_epi16(a, b)
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#endif
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SIMDE__FUNCTION_ATTRIBUTES
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simde__m512i
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simde_mm512_adds_epi8 (simde__m512i a, simde__m512i b) {
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return _mm512_adds_epi8(a, b);
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#else
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a_ = simde__m512i_to_private(a),
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b_ = simde__m512i_to_private(b);
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#if !defined(HEDLEY_INTEL_VERSION)
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SIMDE__VECTORIZE
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for (size_t i = 0 ; i < (sizeof(r_.m256i) / sizeof(r_.m256i[0])) ; i++) {
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r_.m256i[i] = simde_mm256_adds_epi8(a_.m256i[i], b_.m256i[i]);
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}
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#else
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SIMDE__VECTORIZE
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HEDLEY_STATIC_CAST(int16_t, a_.i8[i]) +
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HEDLEY_STATIC_CAST(int16_t, b_.i8[i]);
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r_.i8[i] = HEDLEY_STATIC_CAST(int8_t, ((tmp < INT8_MAX) ? ((tmp > INT8_MIN) ? tmp : INT8_MIN) : INT8_MAX));
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}
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#endif
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return simde__m512i_from_private(r_);
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#endif
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}
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#if defined(SIMDE_AVX512BW_ENABLE_NATIVE_ALIASES)
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# define _mm512_adds_epi8(a, b) simde_mm512_adds_epi8(a, b)
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#endif
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SIMDE__FUNCTION_ATTRIBUTES
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simde__m512i
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simde_mm512_adds_epi16 (simde__m512i a, simde__m512i b) {
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#if defined(SIMDE_AVX512BW_NATIVE)
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return _mm512_adds_epi16(a, b);
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#else
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simde__m512i_private
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r_,
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a_ = simde__m512i_to_private(a),
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b_ = simde__m512i_to_private(b);
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#if !defined(HEDLEY_INTEL_VERSION)
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SIMDE__VECTORIZE
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for (size_t i = 0 ; i < (sizeof(r_.m256i) / sizeof(r_.m256i[0])) ; i++) {
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r_.m256i[i] = simde_mm256_adds_epi16(a_.m256i[i], b_.m256i[i]);
|
|
161
|
+
}
|
|
162
|
+
#else
|
|
163
|
+
SIMDE__VECTORIZE
|
|
164
|
+
for (size_t i = 0 ; i < (sizeof(r_.i16) / sizeof(r_.i16[0])) ; i++) {
|
|
165
|
+
const int32_t tmp =
|
|
166
|
+
HEDLEY_STATIC_CAST(int32_t, a_.i16[i]) +
|
|
167
|
+
HEDLEY_STATIC_CAST(int32_t, b_.i16[i]);
|
|
168
|
+
r_.i16[i] = HEDLEY_STATIC_CAST(int32_t, ((tmp < INT16_MAX) ? ((tmp > INT16_MIN) ? tmp : INT16_MIN) : INT16_MAX));
|
|
169
|
+
}
|
|
170
|
+
#endif
|
|
171
|
+
|
|
172
|
+
return simde__m512i_from_private(r_);
|
|
173
|
+
#endif
|
|
174
|
+
}
|
|
175
|
+
#if defined(SIMDE_AVX512BW_ENABLE_NATIVE_ALIASES)
|
|
176
|
+
# define _mm512_adds_epi16(a, b) simde_mm512_adds_epi16(a, b)
|
|
177
|
+
#endif
|
|
178
|
+
|
|
179
|
+
SIMDE__FUNCTION_ATTRIBUTES
|
|
180
|
+
simde__m512i
|
|
181
|
+
simde_mm512_adds_epu8 (simde__m512i a, simde__m512i b) {
|
|
182
|
+
#if defined(SIMDE_AVX512BW_NATIVE)
|
|
183
|
+
return _mm512_adds_epu8(a, b);
|
|
184
|
+
#else
|
|
185
|
+
simde__m512i_private
|
|
186
|
+
r_,
|
|
187
|
+
a_ = simde__m512i_to_private(a),
|
|
188
|
+
b_ = simde__m512i_to_private(b);
|
|
189
|
+
|
|
190
|
+
#if !defined(HEDLEY_INTEL_VERSION)
|
|
191
|
+
SIMDE__VECTORIZE
|
|
192
|
+
for (size_t i = 0 ; i < (sizeof(r_.m128i) / sizeof(r_.m128i[0])) ; i++) {
|
|
193
|
+
r_.m128i[i] = simde_mm_adds_epu8(a_.m128i[i], b_.m128i[i]);
|
|
194
|
+
}
|
|
195
|
+
#else
|
|
196
|
+
SIMDE__VECTORIZE
|
|
197
|
+
for (size_t i = 0 ; i < (sizeof(r_.u8) / sizeof(r_.u8[0])) ; i++) {
|
|
198
|
+
r_.u8[i] = ((UINT8_MAX - a_.u8[i]) > b_.u8[i]) ? (a_.u8[i] + b_.u8[i]) : UINT8_MAX;
|
|
199
|
+
}
|
|
200
|
+
#endif
|
|
201
|
+
|
|
202
|
+
return simde__m512i_from_private(r_);
|
|
203
|
+
#endif
|
|
204
|
+
}
|
|
205
|
+
#if defined(SIMDE_AVX512BW_ENABLE_NATIVE_ALIASES)
|
|
206
|
+
# define _mm512_adds_epu8(a, b) simde_mm512_adds_epu8(a, b)
|
|
207
|
+
#endif
|
|
208
|
+
|
|
209
|
+
SIMDE__FUNCTION_ATTRIBUTES
|
|
210
|
+
simde__m512i
|
|
211
|
+
simde_mm512_adds_epu16 (simde__m512i a, simde__m512i b) {
|
|
212
|
+
#if defined(SIMDE_AVX512BW_NATIVE)
|
|
213
|
+
return _mm512_adds_epu16(a, b);
|
|
214
|
+
#else
|
|
215
|
+
simde__m512i_private
|
|
216
|
+
r_,
|
|
217
|
+
a_ = simde__m512i_to_private(a),
|
|
218
|
+
b_ = simde__m512i_to_private(b);
|
|
219
|
+
|
|
220
|
+
#if !defined(HEDLEY_INTEL_VERSION)
|
|
221
|
+
SIMDE__VECTORIZE
|
|
222
|
+
for (size_t i = 0 ; i < (sizeof(r_.m256i) / sizeof(r_.m256i[0])) ; i++) {
|
|
223
|
+
r_.m256i[i] = simde_mm256_adds_epu16(a_.m256i[i], b_.m256i[i]);
|
|
224
|
+
}
|
|
225
|
+
#else
|
|
226
|
+
SIMDE__VECTORIZE
|
|
227
|
+
for (size_t i = 0 ; i < (sizeof(r_.u16) / sizeof(r_.u16[0])) ; i++) {
|
|
228
|
+
r_.u16[i] = ((UINT16_MAX - a_.u16[i]) > b_.u16[i]) ? (a_.u16[i] + b_.u16[i]) : UINT16_MAX;
|
|
229
|
+
}
|
|
230
|
+
#endif
|
|
231
|
+
|
|
232
|
+
return simde__m512i_from_private(r_);
|
|
233
|
+
#endif
|
|
234
|
+
}
|
|
235
|
+
#if defined(SIMDE_AVX512BW_ENABLE_NATIVE_ALIASES)
|
|
236
|
+
# define _mm512_adds_epu16(a, b) simde_mm512_adds_epu16(a, b)
|
|
237
|
+
#endif
|
|
238
|
+
|
|
239
|
+
SIMDE__FUNCTION_ATTRIBUTES
|
|
240
|
+
simde__m512i
|
|
241
|
+
simde_mm512_shuffle_epi8 (simde__m512i a, simde__m512i b) {
|
|
242
|
+
#if defined(SIMDE_AVX512BW_NATIVE)
|
|
243
|
+
return _mm512_shuffle_epi8(a, b);
|
|
244
|
+
#else
|
|
245
|
+
simde__m512i_private
|
|
246
|
+
r_,
|
|
247
|
+
a_ = simde__m512i_to_private(a),
|
|
248
|
+
b_ = simde__m512i_to_private(b);
|
|
249
|
+
|
|
250
|
+
#if defined(SIMDE_ARCH_X86_AVX2)
|
|
251
|
+
r_.m256i[0] = simde_mm256_shuffle_epi8(a_.m256i[0], b_.m256i[0]);
|
|
252
|
+
r_.m256i[1] = simde_mm256_shuffle_epi8(a_.m256i[1], b_.m256i[1]);
|
|
253
|
+
#elif defined(SIMDE_ARCH_X86_SSSE3)
|
|
254
|
+
r_.m128i[0] = simde_mm_shuffle_epi8(a_.m128i[0], b_.m128i[0]);
|
|
255
|
+
r_.m128i[1] = simde_mm_shuffle_epi8(a_.m128i[1], b_.m128i[1]);
|
|
256
|
+
r_.m128i[2] = simde_mm_shuffle_epi8(a_.m128i[2], b_.m128i[2]);
|
|
257
|
+
r_.m128i[3] = simde_mm_shuffle_epi8(a_.m128i[3], b_.m128i[3]);
|
|
258
|
+
#else
|
|
259
|
+
SIMDE__VECTORIZE
|
|
260
|
+
for (size_t i = 0 ; i < (sizeof(r_.u8) / sizeof(r_.u8[0])) ; i++) {
|
|
261
|
+
r_.u8[i] = (b_.u8[i] & 0x80) ? 0 : a_.u8[(b_.u8[i] & 0x0f) + (i & 0x30)];
|
|
262
|
+
}
|
|
263
|
+
#endif
|
|
264
|
+
|
|
265
|
+
return simde__m512i_from_private(r_);
|
|
266
|
+
#endif
|
|
267
|
+
}
|
|
268
|
+
#if defined(SIMDE_AVX512BW_ENABLE_NATIVE_ALIASES)
|
|
269
|
+
# define _mm512_shuffle_epi8(a, b) simde_mm512_shuffle_epi8(a, b)
|
|
270
|
+
#endif
|
|
271
|
+
|
|
272
|
+
|
|
273
|
+
SIMDE__FUNCTION_ATTRIBUTES
|
|
274
|
+
simde__mmask64
|
|
275
|
+
simde_mm512_cmpeq_epi8_mask (simde__m512i a, simde__m512i b) {
|
|
276
|
+
#if defined(SIMDE_AVX512BW_NATIVE)
|
|
277
|
+
return _mm512_cmpeq_epi8_mask(a, b);
|
|
278
|
+
#else
|
|
279
|
+
simde__m512i_private
|
|
280
|
+
a_ = simde__m512i_to_private(a),
|
|
281
|
+
b_ = simde__m512i_to_private(b);
|
|
282
|
+
|
|
283
|
+
#if defined(SIMDE_ARCH_X86_AVX2)
|
|
284
|
+
simde__mmask64 r_;
|
|
285
|
+
|
|
286
|
+
// The second cast is absolutely necessary otherwise if the sign bit is set it will be sign extended to 64 bits
|
|
287
|
+
r_ = (uint32_t) simde_mm256_movemask_epi8(simde_mm256_cmpeq_epi8(a_.m256i[1], b_.m256i[1]));
|
|
288
|
+
r_ = (r_ << 32) | (uint32_t) simde_mm256_movemask_epi8(simde_mm256_cmpeq_epi8(a_.m256i[0], b_.m256i[0]));
|
|
289
|
+
#elif defined(SIMDE_ARCH_X86_SSE2)
|
|
290
|
+
simde__mmask64 r_;
|
|
291
|
+
|
|
292
|
+
r_ = simde_mm_movemask_epi8(simde_mm_cmpeq_epi8(a_.m128i[3], b_.m128i[3]));
|
|
293
|
+
r_ = (r_ << 16) | simde_mm_movemask_epi8(simde_mm_cmpeq_epi8(a_.m128i[2], b_.m128i[2]));
|
|
294
|
+
r_ = (r_ << 16) | simde_mm_movemask_epi8(simde_mm_cmpeq_epi8(a_.m128i[1], b_.m128i[1]));
|
|
295
|
+
r_ = (r_ << 16) | simde_mm_movemask_epi8(simde_mm_cmpeq_epi8(a_.m128i[0], b_.m128i[0]));
|
|
296
|
+
#else
|
|
297
|
+
simde__mmask64 r_ = 0;
|
|
298
|
+
|
|
299
|
+
for (size_t i = 0 ; i < (sizeof(a_.u8) / sizeof(a_.u8[0])) ; i++) {
|
|
300
|
+
r_ |= (a_.u8[i] == b_.u8[i]) ? (1ULL << i) : 0;
|
|
301
|
+
}
|
|
302
|
+
#endif
|
|
303
|
+
|
|
304
|
+
return r_;
|
|
305
|
+
#endif
|
|
306
|
+
}
|
|
307
|
+
#if defined(SIMDE_AVX512BW_ENABLE_NATIVE_ALIASES)
|
|
308
|
+
# define _mm512_cmpeq_epi8_mask(a, b) simde_mm512_cmpeq_epi8_mask(a, b)
|
|
309
|
+
#endif
|
|
310
|
+
|
|
311
|
+
SIMDE__FUNCTION_ATTRIBUTES
|
|
312
|
+
simde__m256i
|
|
313
|
+
simde_mm512_cvtepi16_epi8 (simde__m512i a) {
|
|
314
|
+
#if defined(SIMDE_AVX512BW_NATIVE)
|
|
315
|
+
return _mm512_cvtepi16_epi8(a);
|
|
316
|
+
#else
|
|
317
|
+
simde__m256i_private r_;
|
|
318
|
+
simde__m512i_private a_ = simde__m512i_to_private(a);
|
|
319
|
+
|
|
320
|
+
#if defined(SIMDE__CONVERT_VECTOR)
|
|
321
|
+
SIMDE__CONVERT_VECTOR(r_.i8, a_.i16);
|
|
322
|
+
#else
|
|
323
|
+
SIMDE__VECTORIZE
|
|
324
|
+
for (size_t i = 0 ; i < (sizeof(r_.i8) / sizeof(r_.i8[0])) ; i++) {
|
|
325
|
+
r_.i8[i] = HEDLEY_STATIC_CAST(int8_t, a_.i16[i]);
|
|
326
|
+
}
|
|
327
|
+
#endif
|
|
328
|
+
|
|
329
|
+
return simde__m256i_from_private(r_);
|
|
330
|
+
#endif
|
|
331
|
+
}
|
|
332
|
+
#if defined(SIMDE_AVX512BW_ENABLE_NATIVE_ALIASES)
|
|
333
|
+
# define _mm512_cvtepi16_epi8(a) simde_mm512_cvtepi16_epi8(a)
|
|
334
|
+
#endif
|
|
335
|
+
|
|
336
|
+
SIMDE__FUNCTION_ATTRIBUTES
|
|
337
|
+
simde__m512i
|
|
338
|
+
simde_mm512_cvtepi8_epi16 (simde__m256i a) {
|
|
339
|
+
#if defined(SIMDE_AVX512BW_NATIVE)
|
|
340
|
+
return _mm512_cvtepi8_epi16(a);
|
|
341
|
+
#else
|
|
342
|
+
simde__m512i_private r_;
|
|
343
|
+
simde__m256i_private a_ = simde__m256i_to_private(a);
|
|
344
|
+
|
|
345
|
+
#if defined(SIMDE__CONVERT_VECTOR)
|
|
346
|
+
SIMDE__CONVERT_VECTOR(r_.i16, a_.i8);
|
|
347
|
+
#else
|
|
348
|
+
SIMDE__VECTORIZE
|
|
349
|
+
for (size_t i = 0 ; i < (sizeof(r_.i16) / sizeof(r_.i16[0])) ; i++) {
|
|
350
|
+
r_.i16[i] = a_.i8[i];
|
|
351
|
+
}
|
|
352
|
+
#endif
|
|
353
|
+
|
|
354
|
+
return simde__m512i_from_private(r_);
|
|
355
|
+
#endif
|
|
356
|
+
}
|
|
357
|
+
#if defined(SIMDE_AVX512BW_ENABLE_NATIVE_ALIASES)
|
|
358
|
+
# define _mm512_cvtepi8_epi16(a) simde_mm512_cvtepi8_epi16(a)
|
|
359
|
+
#endif
|
|
360
|
+
|
|
361
|
+
SIMDE__FUNCTION_ATTRIBUTES
|
|
362
|
+
simde__m256i
|
|
363
|
+
simde_mm512_cvtsepi16_epi8 (simde__m512i a) {
|
|
364
|
+
#if defined(SIMDE_AVX512VL_NATIVE) && defined(SIMDE_AVX512BW_NATIVE)
|
|
365
|
+
return _mm512_cvtsepi16_epi8(a);
|
|
366
|
+
#else
|
|
367
|
+
simde__m256i_private r_;
|
|
368
|
+
simde__m512i_private a_ = simde__m512i_to_private(a);
|
|
369
|
+
|
|
370
|
+
SIMDE__VECTORIZE
|
|
371
|
+
for (size_t i = 0 ; i < (sizeof(r_.i8) / sizeof(r_.i8[0])) ; i++) {
|
|
372
|
+
r_.i8[i] =
|
|
373
|
+
(a_.i16[i] < INT8_MIN)
|
|
374
|
+
? (INT8_MIN)
|
|
375
|
+
: ((a_.i16[i] > INT8_MAX)
|
|
376
|
+
? (INT8_MAX)
|
|
377
|
+
: HEDLEY_STATIC_CAST(int8_t, a_.i16[i]));
|
|
378
|
+
}
|
|
379
|
+
|
|
380
|
+
return simde__m256i_from_private(r_);
|
|
381
|
+
#endif
|
|
382
|
+
}
|
|
383
|
+
#if defined(SIMDE_AVX512VL_ENABLE_NATIVE_ALIASES)
|
|
384
|
+
#define _mm512_cvtsepi16_epi8(a) simde_mm512_cvtsepi16_epi8(a)
|
|
385
|
+
#endif
|
|
386
|
+
|
|
387
|
+
SIMDE__END_DECLS
|
|
388
|
+
|
|
389
|
+
HEDLEY_DIAGNOSTIC_POP
|
|
390
|
+
|
|
391
|
+
#endif /* !defined(SIMDE__AVX512BW_H) */
|