miga-base 1.3.6.2 → 1.3.7.0

checksums.yaml

@@ -1,7 +1,7 @@
 ---
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data/lib/miga/version.rb

@@ -12,7 +12,7 @@ module MiGA
   # - String indicating release status:
   #   - rc* release candidate, not released as gem
   #   - [0-9]+ stable release, released as gem
-  VERSION = [1.3, 6, 2].freeze
+  VERSION = [1.3, 7, 0].freeze
 
   ##
   # Nickname for the current major.minor version.
@@ -20,7 +20,7 @@ module MiGA
 
   ##
   # Date of the current gem relese.
-  VERSION_DATE = Date.new(2023, 5, 18)
+  VERSION_DATE = Date.new(2023, 6, 4)
 
   ##
   # References of MiGA

data/utils/distance/commands.rb

@@ -224,7 +224,10 @@ module MiGA::DistanceRunner::Commands
         else
           out[6] = out[6].to_f
         end
-        aai_data[out[1]] = [out[6], 0, 0, 0]
+
+        # AAI-hat can result in 0.0 values (e.g., "<30%") when low-quality
+        # genome comparisons produce unrealistically small estimates. 
+        aai_data[out[1]] = [out[6], 0, 0, 0] unless out[6].zero?
       end
     end
     $stderr.puts "Results: #{haai_data.size} | Inferences: #{aai_data.size}"

metadata

@@ -1,14 +1,14 @@
 --- !ruby/object:Gem::Specification
 name: miga-base
 version: !ruby/object:Gem::Version
-  version: 1.3.6.2
+  version: 1.3.7.0
 platform: ruby
 authors:
 - Luis M. Rodriguez-R
 autorequire: 
 bindir: bin
 cert_chain: []
-date: 2023-05-18 00:00:00.000000000 Z
+date: 2023-06-04 00:00:00.000000000 Z
 dependencies:
 - !ruby/object:Gem::Dependency
   name: daemons