miga-base 1.3.6.2 → 1.3.7.0

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checksums.yaml CHANGED
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data/lib/miga/version.rb CHANGED
@@ -12,7 +12,7 @@ module MiGA
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  # - String indicating release status:
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  # - rc* release candidate, not released as gem
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  # - [0-9]+ stable release, released as gem
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- VERSION = [1.3, 6, 2].freeze
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+ VERSION = [1.3, 7, 0].freeze
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  ##
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  # Nickname for the current major.minor version.
@@ -20,7 +20,7 @@ module MiGA
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  ##
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  # Date of the current gem relese.
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- VERSION_DATE = Date.new(2023, 5, 18)
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+ VERSION_DATE = Date.new(2023, 6, 4)
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  ##
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  # References of MiGA
@@ -224,7 +224,10 @@ module MiGA::DistanceRunner::Commands
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  else
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  out[6] = out[6].to_f
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  end
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- aai_data[out[1]] = [out[6], 0, 0, 0]
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+
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+ # AAI-hat can result in 0.0 values (e.g., "<30%") when low-quality
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+ # genome comparisons produce unrealistically small estimates.
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+ aai_data[out[1]] = [out[6], 0, 0, 0] unless out[6].zero?
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  end
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  end
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  $stderr.puts "Results: #{haai_data.size} | Inferences: #{aai_data.size}"
metadata CHANGED
@@ -1,14 +1,14 @@
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  --- !ruby/object:Gem::Specification
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  name: miga-base
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  version: !ruby/object:Gem::Version
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- version: 1.3.6.2
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+ version: 1.3.7.0
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  platform: ruby
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  authors:
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  - Luis M. Rodriguez-R
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  autorequire:
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  bindir: bin
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  cert_chain: []
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- date: 2023-05-18 00:00:00.000000000 Z
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+ date: 2023-06-04 00:00:00.000000000 Z
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  dependencies:
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  - !ruby/object:Gem::Dependency
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  name: daemons