miga-base 1.3.20.7 → 1.3.20.8
This diff represents the content of publicly available package versions that have been released to one of the supported registries. The information contained in this diff is provided for informational purposes only and reflects changes between package versions as they appear in their respective public registries.
- checksums.yaml +4 -4
- data/lib/miga/cli/action/doctor/distances.rb +9 -7
- data/lib/miga/version.rb +1 -1
- metadata +1 -1
checksums.yaml
CHANGED
|
@@ -1,7 +1,7 @@
|
|
|
1
1
|
---
|
|
2
2
|
SHA256:
|
|
3
|
-
metadata.gz:
|
|
4
|
-
data.tar.gz:
|
|
3
|
+
metadata.gz: 884fa2f8a10738f2de273cb19a10388f96c06bf60c0c1561a450c9a33baf92d8
|
|
4
|
+
data.tar.gz: 93b494c3000517ff796380c3de3606066d6a853c170bbbbc7cb55a9dc1ed6e5a
|
|
5
5
|
SHA512:
|
|
6
|
-
metadata.gz:
|
|
7
|
-
data.tar.gz:
|
|
6
|
+
metadata.gz: 366f03ddf1672c236d3378d9da097b363d608729f28eb30c1f4770702994b88959444f7a9ff058fda3999de1cd9df7d90320fd2314d42eac7dbbc1c5b2b9162f
|
|
7
|
+
data.tar.gz: 58189a89c46f22c757b62e5d427f6b0fe89d80c692fda3a566aadc743a9e1ca991cfbe5d667af9ee1c05aebe3c6cc28f13ba71300609ad7a19f661b3a5d26e93
|
|
@@ -92,13 +92,15 @@ module MiGA::Cli::Action::Doctor::Distances
|
|
|
92
92
|
|
|
93
93
|
# Check first if a previous run is complete (and recover it)
|
|
94
94
|
tmp = File.join(project.path, 'doctor-bidirectional.tmp')
|
|
95
|
-
|
|
96
|
-
|
|
97
|
-
|
|
98
|
-
|
|
95
|
+
tmp_chunks = File.join(tmp, 'chunks.txt')
|
|
96
|
+
tmp_chunks_val = [chunks, 0]
|
|
97
|
+
if File.size?(tmp_chunks)
|
|
98
|
+
tmp_chunks_val = File.readlines(tmp_chunks).map(&:chomp).map(&:to_i)
|
|
99
99
|
end
|
|
100
|
+
chunks = tmp_chunks_val[0]
|
|
101
|
+
FileUtils.rm_rf(tmp) unless tmp_chunks_val[1] == n
|
|
100
102
|
|
|
101
|
-
# Read data
|
|
103
|
+
# Read data (threaded)
|
|
102
104
|
FileUtils.mkdir_p(tmp)
|
|
103
105
|
chunks_e = 0 .. chunks - 1
|
|
104
106
|
MiGA::Parallel.distribute(chunks_e, cli[:threads]) do |chunk, k, thr|
|
|
@@ -121,7 +123,7 @@ module MiGA::Cli::Action::Doctor::Distances
|
|
|
121
123
|
cli.say
|
|
122
124
|
|
|
123
125
|
# Save information to indicate that the run is complete and return
|
|
124
|
-
File.open(
|
|
126
|
+
File.open(tmp_chunks, 'w') { |fh| fh.puts(chunks, n) }
|
|
125
127
|
return tmp
|
|
126
128
|
end
|
|
127
129
|
|
|
@@ -130,7 +132,7 @@ module MiGA::Cli::Action::Doctor::Distances
|
|
|
130
132
|
# fill databases with missing values. Returns the names of the datasets fixed
|
|
131
133
|
# as a Set.
|
|
132
134
|
def merge_bidir_tmp(tmp)
|
|
133
|
-
tmp_done = File.join(tmp, '
|
|
135
|
+
tmp_done = File.join(tmp, 'chunks.txt')
|
|
134
136
|
chunks = File.readlines(tmp_done)[0].chomp.to_i
|
|
135
137
|
|
|
136
138
|
lower_triangle = []
|
data/lib/miga/version.rb
CHANGED
|
@@ -12,7 +12,7 @@ module MiGA
|
|
|
12
12
|
# - String indicating release status:
|
|
13
13
|
# - rc* release candidate, not released as gem
|
|
14
14
|
# - [0-9]+ stable release, released as gem
|
|
15
|
-
VERSION = [1.3, 20,
|
|
15
|
+
VERSION = [1.3, 20, 8].freeze
|
|
16
16
|
|
|
17
17
|
##
|
|
18
18
|
# Nickname for the current major.minor version.
|