miga-base 1.3.14.2 → 1.3.14.4
Sign up to get free protection for your applications and to get access to all the features.
- checksums.yaml +4 -4
- data/lib/miga/cli/action/run.rb +1 -1
- data/lib/miga/version.rb +2 -2
- data/test/remote_dataset_test.rb +4 -1
- metadata +2 -2
checksums.yaml
CHANGED
|
@@ -1,7 +1,7 @@
|
|
|
1
1
|
---
|
|
2
2
|
SHA256:
|
|
3
|
-
metadata.gz:
|
|
4
|
-
data.tar.gz:
|
|
3
|
+
metadata.gz: 12530028c3e6587950ac7fa614a6ac24b50e51901235b1b881fcb71d67506cb1
|
|
4
|
+
data.tar.gz: 6740c893798b3e79fb1bee27da95111141da996c90799594e007101c4873394b
|
|
5
5
|
SHA512:
|
|
6
|
-
metadata.gz:
|
|
7
|
-
data.tar.gz:
|
|
6
|
+
metadata.gz: d5736f50f13d26622c0cd247899d4e0bf2f9bf3bd506f89f8c605e728231867158ac8a031464eca4853bc2f6ed9700f0e64f57f2eeb4dd6f66ffcd056294ea21
|
|
7
|
+
data.tar.gz: b4c0a2af4ee7149e5beb950174a0c1918af7b85d1f80cfd49237095d170c159335c24adf49fe6601c37b3a15d7d3e2264e997005796ff89c8ca0b214f2c94a94
|
data/lib/miga/cli/action/run.rb
CHANGED
|
@@ -84,7 +84,7 @@ class MiGA::Cli::Action::Run < MiGA::Cli::Action
|
|
|
84
84
|
cmd << MiGA.script_path(cli[:result], miga: miga, project: p).shellescape
|
|
85
85
|
if cli[:remote]
|
|
86
86
|
cmd = [
|
|
87
|
-
'ssh', '-t', '-t',
|
|
87
|
+
'ssh', '-t', '-t', '-o', 'StrictHostKeyChecking off'.shellescape,
|
|
88
88
|
cli[:remote].shellescape,
|
|
89
89
|
cmd.join(' ').shellescape
|
|
90
90
|
]
|
data/lib/miga/version.rb
CHANGED
|
@@ -12,7 +12,7 @@ module MiGA
|
|
|
12
12
|
# - String indicating release status:
|
|
13
13
|
# - rc* release candidate, not released as gem
|
|
14
14
|
# - [0-9]+ stable release, released as gem
|
|
15
|
-
VERSION = [1.3, 14,
|
|
15
|
+
VERSION = [1.3, 14, 4].freeze
|
|
16
16
|
|
|
17
17
|
##
|
|
18
18
|
# Nickname for the current major.minor version.
|
|
@@ -20,7 +20,7 @@ module MiGA
|
|
|
20
20
|
|
|
21
21
|
##
|
|
22
22
|
# Date of the current gem relese.
|
|
23
|
-
VERSION_DATE = Date.new(2024, 4,
|
|
23
|
+
VERSION_DATE = Date.new(2024, 4, 13)
|
|
24
24
|
|
|
25
25
|
##
|
|
26
26
|
# References of MiGA
|
data/test/remote_dataset_test.rb
CHANGED
|
@@ -22,7 +22,10 @@ class RemoteDatasetTest < Test::Unit::TestCase
|
|
|
22
22
|
|
|
23
23
|
def test_get
|
|
24
24
|
hiv2 = 'M30502.1'
|
|
25
|
-
|
|
25
|
+
# TODO
|
|
26
|
+
# EMBL Temporarily down, enable back whenever possible!
|
|
27
|
+
#{ embl: :ebi, nuccore: :ncbi }.each do |db, universe|
|
|
28
|
+
{ nuccore: :ncbi }.each do |db, universe|
|
|
26
29
|
rd = MiGA::RemoteDataset.new(hiv2, db, universe)
|
|
27
30
|
assert_equal([hiv2], rd.ids)
|
|
28
31
|
|
metadata
CHANGED
|
@@ -1,14 +1,14 @@
|
|
|
1
1
|
--- !ruby/object:Gem::Specification
|
|
2
2
|
name: miga-base
|
|
3
3
|
version: !ruby/object:Gem::Version
|
|
4
|
-
version: 1.3.14.
|
|
4
|
+
version: 1.3.14.4
|
|
5
5
|
platform: ruby
|
|
6
6
|
authors:
|
|
7
7
|
- Luis M. Rodriguez-R
|
|
8
8
|
autorequire:
|
|
9
9
|
bindir: bin
|
|
10
10
|
cert_chain: []
|
|
11
|
-
date: 2024-04-
|
|
11
|
+
date: 2024-04-13 00:00:00.000000000 Z
|
|
12
12
|
dependencies:
|
|
13
13
|
- !ruby/object:Gem::Dependency
|
|
14
14
|
name: daemons
|