miga-base 1.3.10.3 → 1.3.11.0
This diff represents the content of publicly available package versions that have been released to one of the supported registries. The information contained in this diff is provided for informational purposes only and reflects changes between package versions as they appear in their respective public registries.
- checksums.yaml +4 -4
- data/lib/miga/cli/action/get.rb +5 -0
- data/lib/miga/remote_dataset.rb +1 -0
- data/lib/miga/version.rb +2 -2
- metadata +2 -2
checksums.yaml
CHANGED
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@@ -1,7 +1,7 @@
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---
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SHA256:
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metadata.gz:
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data.tar.gz:
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metadata.gz: 4d513b44448defe8d433ed9c6f573dcc84df356c610598e3b2bbaea370c9f459
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data.tar.gz: e09fb9877dfe796856db08b80ac176033025603a49ca5222fda69942544c99ff
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SHA512:
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metadata.gz:
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data.tar.gz:
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metadata.gz: e55a66e7dd5e8fe3b06ba3ed36d1a6b7e1480d8a99505e348f1a3fe4ebd3ffdc90b878249f788ac6b930544f7f7b5a24fc847a0bd2e55331c74f5af0256e2f92
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7
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data.tar.gz: f26bc6e99d591a60603c06de28f6b622ac13ed9e4d17acce43f532a3d29bed930e013aa7bd84b93aa1f9ca272c4427ea4bce7afe8e0bd5fbeef4174b75d40142
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data/lib/miga/cli/action/get.rb
CHANGED
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@@ -61,6 +61,10 @@ class MiGA::Cli::Action::Get < MiGA::Cli::Action
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'--only-metadata',
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'Create datasets without input data but retrieve all metadata'
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) { |v| cli[:only_md] = v }
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opt.on(
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'--bypass-metadata',
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'Do not gather optional metadata such as the dataset taxonomy'
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) { |v| cli[:bypass_md] = v }
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opt.on(
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'--api-key STRING',
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'API key for the given universe'
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@@ -75,6 +79,7 @@ class MiGA::Cli::Action::Get < MiGA::Cli::Action
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rd = create_remote_dataset(sub_cli, p)
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next if rd.nil?
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rd.metadata[:bypass_metadata] = true if sub_cli[:bypass_md]
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if sub_cli[:get_md]
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update_metadata(sub_cli, p, rd)
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else
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data/lib/miga/remote_dataset.rb
CHANGED
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@@ -188,6 +188,7 @@ class MiGA::RemoteDataset < MiGA::MiGA
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# Get metadata from the remote location.
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def get_metadata(metadata_def = {})
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metadata_def.each { |k, v| @metadata[k] = v }
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return @metadata if @metadata[:bypass_metadata]
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case universe
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when :ebi, :ncbi, :web
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data/lib/miga/version.rb
CHANGED
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@@ -12,7 +12,7 @@ module MiGA
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# - String indicating release status:
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# - rc* release candidate, not released as gem
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# - [0-9]+ stable release, released as gem
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VERSION = [1.3,
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VERSION = [1.3, 11, 0].freeze
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##
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# Nickname for the current major.minor version.
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@@ -20,7 +20,7 @@ module MiGA
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##
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# Date of the current gem relese.
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VERSION_DATE = Date.new(2024, 2,
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VERSION_DATE = Date.new(2024, 2, 11)
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##
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# References of MiGA
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metadata
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@@ -1,14 +1,14 @@
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--- !ruby/object:Gem::Specification
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name: miga-base
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version: !ruby/object:Gem::Version
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version: 1.3.
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version: 1.3.11.0
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platform: ruby
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authors:
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- Luis M. Rodriguez-R
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autorequire:
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bindir: bin
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cert_chain: []
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date: 2024-02-
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date: 2024-02-11 00:00:00.000000000 Z
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dependencies:
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- !ruby/object:Gem::Dependency
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name: daemons
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