miga-base 1.2.0.0 → 1.2.0.1
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- checksums.yaml +4 -4
- data/lib/miga/cli/opt_helper.rb +7 -6
- data/lib/miga/version.rb +1 -1
- data/utils/find-medoid.R +0 -1
- metadata +1 -1
checksums.yaml
CHANGED
@@ -1,7 +1,7 @@
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1
1
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---
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2
2
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SHA256:
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3
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-
metadata.gz:
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4
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-
data.tar.gz:
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3
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+
metadata.gz: 27068ded9d2ff63c3575a5aafd3fa68374f4bcf8aef924354e0c9cbde7dc1f6d
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4
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+
data.tar.gz: ef438e828180d304a9e3449d49551ace933a5e5a46128970b3c8bc385c836d58
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5
5
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SHA512:
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6
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-
metadata.gz:
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7
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-
data.tar.gz:
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6
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+
metadata.gz: 894cbeca2aa4f5e29c6bd6e1c23c9c358b9f3b497960998116169fa62d7122da78417e357789dc9b9b7bfdfad824f835b3daa035d1320cb948e5cdc4b1d74bb3
|
7
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+
data.tar.gz: 8bea4585b36855195f3a2d76005a6ff664133c1df639a677402907c88fd8f6b0a25fb34cc4bd0e9e38bc7666dbe3a382644137dcf5cddd4005c93256d2c75c05
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data/lib/miga/cli/opt_helper.rb
CHANGED
@@ -1,6 +1,7 @@
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1
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-
#
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2
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-
# @license Artistic-2.0
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1
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+
# frozen_string_literal: true
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3
2
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3
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+
##
|
4
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+
# Helper module including functions for CLI options
|
4
5
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module MiGA::Cli::OptHelper
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5
6
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##
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6
7
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# Send MiGA's banner to OptionParser +opt+
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@@ -65,7 +66,7 @@ module MiGA::Cli::OptHelper
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65
66
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# - :result_project To require a type of project result
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66
67
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# The options :result, :result_opt, :result_dataset, and :result_project
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67
68
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# are mutually exclusive
|
68
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-
def opt_object(opt, what = [
|
69
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+
def opt_object(opt, what = %i[project dataset])
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69
70
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what.each do |w|
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70
71
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case w
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71
72
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when :project
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@@ -90,7 +91,7 @@ module MiGA::Cli::OptHelper
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90
91
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when :result, :result_opt
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91
92
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opt.on(
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92
93
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'-r', '--result STRING',
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93
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-
"#{
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94
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+
"#{'(Mandatory) ' if w == :result}Name of the result",
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94
95
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'Recognized names for dataset-specific results include:',
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95
96
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*MiGA::Dataset.RESULT_DIRS.keys.map { |n| " ~ #{n}" },
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96
97
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'Recognized names for project-wide results include:',
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@@ -122,7 +123,7 @@ module MiGA::Cli::OptHelper
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122
123
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# - :active To filter by active (--active) or inactive (--no-active)
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123
124
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# - :taxonomy To filter by taxonomy (--taxonomy)
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124
125
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# The "k-th" filter (--dataset-k) is always included
|
125
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-
def opt_filter_datasets(opt, what = [
|
126
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+
def opt_filter_datasets(opt, what = %i[ref multi active taxonomy])
|
126
127
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what.each do |w|
|
127
128
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case w
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128
129
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when :ref
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@@ -165,6 +166,6 @@ module MiGA::Cli::OptHelper
|
|
165
166
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# If +sym+ is nil, +flag+ is used as Symbol
|
166
167
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def opt_flag(opt, flag, description, sym = nil)
|
167
168
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sym = flag.to_sym if sym.nil?
|
168
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-
opt.on("--#{flag.to_s.
|
169
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+
opt.on("--#{flag.to_s.tr('_', '-')}", description) { |v| self[sym] = v }
|
169
170
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end
|
170
171
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end
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data/lib/miga/version.rb
CHANGED
@@ -12,7 +12,7 @@ module MiGA
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12
12
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# - String indicating release status:
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13
13
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# - rc* release candidate, not released as gem
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14
14
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# - [0-9]+ stable release, released as gem
|
15
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-
VERSION = [1.2, 0,
|
15
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+
VERSION = [1.2, 0, 1].freeze
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16
16
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|
17
17
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##
|
18
18
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# Nickname for the current major.minor version.
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data/utils/find-medoid.R
CHANGED