miga-base 1.1.3.2 → 1.1.3.6

checksums.yaml

@@ -1,7 +1,7 @@
 ---
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-  data.tar.gz: 9bd3e4a7fb5d34c0d34b850a0f300b4f6ddbc4607d63fc92a5240c7674ce53b6
+  metadata.gz: 529121bd6f55dfeb21559b77af71a4537db91cda1fe2fdfc9bdee9adfcaaa962
+  data.tar.gz: 8b892eb88019c4c5d0ec654c722142004867665892a38cf96233afc0b1f30aef
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+  metadata.gz: ab6397d8b74d163cac4afa9a8e79776b91c1c4175da947d669bcc9ae441d04a0345f9c31feffbbb6349e5d9375ccd61b6396740763f3d96d0606a9f2312d9ad0
+  data.tar.gz: db534b553aca1ecbcee679edaf33b7cdea972e648b507b2a2e7841f8865f7572e3d498714672b8f49b21babda9f5db311bb580a4e8f90e70470a6fff13f51e6e

data/lib/miga/project.rb

@@ -121,4 +121,11 @@ class MiGA::Project < MiGA::MiGA
   def active?
     true
   end
+
+  ##
+  # Load or recover the project's daemon
+  def daemon
+    require 'miga/daemon'
+    @daemon ||= MiGA::Daemon.new(self)
+  end
 end

data/lib/miga/version.rb

@@ -12,7 +12,7 @@ module MiGA
   # - String indicating release status:
   #   - rc* release candidate, not released as gem
   #   - [0-9]+ stable release, released as gem
-  VERSION = [1.1, 3, 2].freeze
+  VERSION = [1.1, 3, 6].freeze
 
   ##
   # Nickname for the current major.minor version.
@@ -20,7 +20,7 @@ module MiGA
 
   ##
   # Date of the current gem relese.
-  VERSION_DATE = Date.new(2021, 11, 26)
+  VERSION_DATE = Date.new(2021, 12, 1)
 
   ##
   # References of MiGA

data/utils/FastAAI/FastAAI

@@ -2954,10 +2954,12 @@ def merge_db(recipient, donors, donor_file, verbose, threads):
 					pass
 	except:
 		#Error
-		shutil.rmtree(temp_dir)
+		if os.path.exists(temp_dir):
+			shutil.rmtree(temp_dir)
 	finally:
 		#Success
-		shutil.rmtree(temp_dir)
+		if os.path.exists(temp_dir):
+			shutil.rmtree(temp_dir)
 		
 	print("\nDatabases merged!")
 	

data/utils/distance/commands.rb

@@ -153,13 +153,15 @@ module MiGA::DistanceRunner::Commands
     return nil if donors.empty?
 
     # Build target database
-    f1 = donors.first
-    if donors.size > 1
+    f1 = tmp_file
+    if donors.size == 1
+      FileUtils.cp(donors.first, f1)
+    else
       File.open(f0 = tmp_file, 'w') { |fh| donors.each { |i| fh.puts i } }
       run_cmd(
         <<~CMD
           FastAAI merge_db --threads #{opts[:thr]} \
-            --donor_file "#{f0}" --recipient "#{f1 = tmp_file}"
+            --donor_file "#{f0}" --recipient "#{f1}"
         CMD
       )
       raise "Cannot merge databases into: #{f1}" unless File.size?(f1)

metadata

@@ -1,14 +1,14 @@
 --- !ruby/object:Gem::Specification
 name: miga-base
 version: !ruby/object:Gem::Version
-  version: 1.1.3.2
+  version: 1.1.3.6
 platform: ruby
 authors:
 - Luis M. Rodriguez-R
 autorequire: 
 bindir: bin
 cert_chain: []
-date: 2021-11-26 00:00:00.000000000 Z
+date: 2021-12-01 00:00:00.000000000 Z
 dependencies:
 - !ruby/object:Gem::Dependency
   name: daemons