miga-base 0.2.1.3 → 0.2.1.4

checksums.yaml

@@ -1,7 +1,7 @@
 ---
 SHA1:
-  metadata.gz: 1e699399cc5b35cf984eb08b96a8c2b40ad67342
-  data.tar.gz: 8a2e41748f576d54d35dfc7faf56d0096ed8da67
+  metadata.gz: 1dd8e19d8780562edc9d8bf94bb84e5f60487e54
+  data.tar.gz: dd86f3de40811fb2862adef1ef5eddb128a9d4d0
 SHA512:
-  metadata.gz: 885a3a93e25bfb7971acbb084a9a6140790076f5f8255300daf31ad4007bc8d1495282d8f6972ff3e473879cbdb20af55b3e076d455076060b922db696f2520b
-  data.tar.gz: 92f6cf6d5ecf3f24afa21964d3b7216e6f6250fc877b2058f46e32dd48d66b141edb3fb1234386c6c1ae51377d09c57a1ead62ea21fc2d55f8fdbd390ce00fcf
+  metadata.gz: f93f2e32564193007777e83fb26583a96081eb607881167ba179ba25187ed4ee466897a188d5a81157d6287bcfff73d0690cb834842ebae182533049cc3d89f3
+  data.tar.gz: a4fcfb6ef19264145afedf204ff9b412db4f9d32549a060d4dc8fab21eca6a0e2c13f8646307c8fff56ef902404246a226668a3045f128c2a494edfd57e46d36

data/lib/miga/version.rb

@@ -10,7 +10,7 @@ module MiGA
   # - Float representing the major.minor version.
   # - Integer representing gem releases of the current version.
   # - Integer representing minor changes that require new version number.
-  VERSION = [0.2, 1, 3]
+  VERSION = [0.2, 1, 4]
   
   ##
   # Nickname for the current major.minor version.

data/utils/plot-taxdist.R

@@ -94,17 +94,15 @@ plot.miga.taxdist <- function(file, exclude=c()){
 miga.taxprob.novel <- function(max.aai, rank, data){
   o <- c()
   for(i in max.aai){
-    a <- sum(data$rank >= rank & data$aai <= i)/sum(data$aai <= i)
-    o <- c(o, a)
+    o <- c(o, sum(data$rank >= rank & data$aai <= i))
   }
-  return(o*sum(data$rank < 12)/sum(data$rank >= rank))
+  return(o/sum(data$rank >= rank))
 }
 
 miga.taxprob.intax <- function(max.aai, rank, data){
   o <- c()
   for(i in max.aai){
-    a <- sum(data$rank < rank & data$aai >= i)/sum(data$aai >= i)
-    o <- c(o, a)
+    o <- c(o, sum(data$rank < rank & data$aai >= i)/sum(data$aai >= i))
   }
-  return(o*sum(data$rank < 12)/sum(data$rank < rank))
+  return(o)
 }

metadata

@@ -1,7 +1,7 @@
 --- !ruby/object:Gem::Specification
 name: miga-base
 version: !ruby/object:Gem::Version
-  version: 0.2.1.3
+  version: 0.2.1.4
 platform: ruby
 authors:
 - Luis M. Rodriguez-R