metamri 0.2.12 → 0.2.13
This diff represents the content of publicly available package versions that have been released to one of the supported registries. The information contained in this diff is provided for informational purposes only and reflects changes between package versions as they appear in their respective public registries.
- data/bin/convert_visit.rb +1 -1
- data/lib/metamri/version.rb +1 -1
- data/metamri.gemspec +1 -1
- metadata +12 -28
data/bin/convert_visit.rb
CHANGED
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@@ -42,7 +42,7 @@ def convert_visit(raw_directory, scan_procedure_codename, output_directory = nil
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42
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output_directory = output_directory ||= v.default_preprocess_directory
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begin
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45
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-
default_options = {:ignore_patterns => [/vipr/,/900$/,/901$/,/999$/]} # seems to like number , not like string
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45
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+
default_options = {:ignore_patterns => [/vipr/,/900$/,/901$/,/999$/]} # seems to like number , not like string ??? /raw/,
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#options = default_options.merge(options)
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v.scan(default_options)
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v.to_nifti!(output_directory)
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data/lib/metamri/version.rb
CHANGED
data/metamri.gemspec
CHANGED
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@@ -19,7 +19,7 @@ Gem::Specification.new do |s|
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s.add_runtime_dependency('dicom', "~> 0.8.0")
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s.add_runtime_dependency('activeresource', "~> 3.0")
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22
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-
s.add_runtime_dependency('rmagick', "~> 2.13.1")
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22
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+
# s.add_runtime_dependency('rmagick', "~> 2.13.1") # rmagick is used by the panda snapshots, so should not be needed on a machine only doing convert visit
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s.add_runtime_dependency('hirb', "~> 0.4")
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s.add_runtime_dependency('sqlite3', "~>1.3.4")
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s.add_development_dependency('rspec', "~> 2.5")
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metadata
CHANGED
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@@ -1,13 +1,13 @@
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1
1
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--- !ruby/object:Gem::Specification
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name: metamri
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3
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version: !ruby/object:Gem::Version
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4
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-
hash:
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4
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+
hash: 13
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5
5
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prerelease:
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6
6
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segments:
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7
7
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- 0
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8
8
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- 2
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9
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-
-
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10
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-
version: 0.2.
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9
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+
- 13
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10
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+
version: 0.2.13
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platform: ruby
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authors:
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- Kristopher J. Kosmatka
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@@ -16,7 +16,7 @@ autorequire:
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bindir: bin
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cert_chain: []
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-
date:
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+
date: 2013-02-18 00:00:00 Z
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dependencies:
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- !ruby/object:Gem::Dependency
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name: dicom
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@@ -49,26 +49,10 @@ dependencies:
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version: "3.0"
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type: :runtime
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version_requirements: *id002
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-
- !ruby/object:Gem::Dependency
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name: rmagick
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prerelease: false
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-
requirement: &id003 !ruby/object:Gem::Requirement
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none: false
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-
requirements:
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-
- - ~>
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-
- !ruby/object:Gem::Version
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-
hash: 57
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-
segments:
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-
- 2
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63
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-
- 13
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64
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-
- 1
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65
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version: 2.13.1
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-
type: :runtime
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-
version_requirements: *id003
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- !ruby/object:Gem::Dependency
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name: hirb
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prerelease: false
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-
requirement: &
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+
requirement: &id003 !ruby/object:Gem::Requirement
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none: false
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requirements:
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- - ~>
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@@ -79,11 +63,11 @@ dependencies:
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- 4
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version: "0.4"
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type: :runtime
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-
version_requirements: *
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+
version_requirements: *id003
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- !ruby/object:Gem::Dependency
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name: sqlite3
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prerelease: false
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-
requirement: &
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requirement: &id004 !ruby/object:Gem::Requirement
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none: false
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requirements:
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- - ~>
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@@ -95,11 +79,11 @@ dependencies:
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- 4
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version: 1.3.4
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type: :runtime
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-
version_requirements: *
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+
version_requirements: *id004
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- !ruby/object:Gem::Dependency
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name: rspec
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prerelease: false
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-
requirement: &
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requirement: &id005 !ruby/object:Gem::Requirement
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none: false
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requirements:
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- - ~>
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@@ -110,11 +94,11 @@ dependencies:
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- 5
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version: "2.5"
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type: :development
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113
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-
version_requirements: *
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+
version_requirements: *id005
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- !ruby/object:Gem::Dependency
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name: escoffier
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prerelease: false
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-
requirement: &
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requirement: &id006 !ruby/object:Gem::Requirement
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none: false
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requirements:
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- - ">="
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@@ -124,7 +108,7 @@ dependencies:
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- 0
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version: "0"
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type: :development
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-
version_requirements: *
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+
version_requirements: *id006
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description: Extraction of MRI metadata.
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email: ekk@medicine.wisc.edu
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executables:
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