metamri 0.2.12 → 0.2.13

data/bin/convert_visit.rb

@@ -42,7 +42,7 @@ def convert_visit(raw_directory, scan_procedure_codename, output_directory = nil
   output_directory = output_directory ||= v.default_preprocess_directory
 
   begin
-    default_options = {:ignore_patterns => [/vipr/,/900$/,/901$/,/999$/]}  # seems to like number , not like string
+    default_options = {:ignore_patterns => [/vipr/,/900$/,/901$/,/999$/]}  # seems to like number , not like string ??? /raw/,
     #options = default_options.merge(options)
     v.scan(default_options)
     v.to_nifti!(output_directory)

data/lib/metamri/version.rb

@@ -1,3 +1,3 @@
 module Metamri
-  VERSION = "0.2.12"
+  VERSION = "0.2.13"
 end

data/metamri.gemspec

@@ -19,7 +19,7 @@ Gem::Specification.new do |s|
 
   s.add_runtime_dependency('dicom', "~> 0.8.0")
   s.add_runtime_dependency('activeresource', "~> 3.0")
-  s.add_runtime_dependency('rmagick', "~> 2.13.1")
+  # s.add_runtime_dependency('rmagick', "~> 2.13.1")  # rmagick is used by the panda snapshots, so should not be needed on a machine only doing convert visit
   s.add_runtime_dependency('hirb', "~> 0.4")
   s.add_runtime_dependency('sqlite3', "~>1.3.4")
   s.add_development_dependency('rspec', "~> 2.5")

metadata

@@ -1,13 +1,13 @@
 --- !ruby/object:Gem::Specification 
 name: metamri
 version: !ruby/object:Gem::Version 
-  hash: 15
+  hash: 13
   prerelease: 
   segments: 
   - 0
   - 2
-  - 12
-  version: 0.2.12
+  - 13
+  version: 0.2.13
 platform: ruby
 authors: 
 - Kristopher J. Kosmatka
@@ -16,7 +16,7 @@ autorequire:
 bindir: bin
 cert_chain: []
 
-date: 2012-07-10 00:00:00 Z
+date: 2013-02-18 00:00:00 Z
 dependencies: 
 - !ruby/object:Gem::Dependency 
   name: dicom
@@ -49,26 +49,10 @@ dependencies:
         version: "3.0"
   type: :runtime
   version_requirements: *id002
-- !ruby/object:Gem::Dependency 
-  name: rmagick
-  prerelease: false
-  requirement: &id003 !ruby/object:Gem::Requirement 
-    none: false
-    requirements: 
-    - - ~>
-      - !ruby/object:Gem::Version 
-        hash: 57
-        segments: 
-        - 2
-        - 13
-        - 1
-        version: 2.13.1
-  type: :runtime
-  version_requirements: *id003
 - !ruby/object:Gem::Dependency 
   name: hirb
   prerelease: false
-  requirement: &id004 !ruby/object:Gem::Requirement 
+  requirement: &id003 !ruby/object:Gem::Requirement 
     none: false
     requirements: 
     - - ~>
@@ -79,11 +63,11 @@ dependencies:
         - 4
         version: "0.4"
   type: :runtime
-  version_requirements: *id004
+  version_requirements: *id003
 - !ruby/object:Gem::Dependency 
   name: sqlite3
   prerelease: false
-  requirement: &id005 !ruby/object:Gem::Requirement 
+  requirement: &id004 !ruby/object:Gem::Requirement 
     none: false
     requirements: 
     - - ~>
@@ -95,11 +79,11 @@ dependencies:
         - 4
         version: 1.3.4
   type: :runtime
-  version_requirements: *id005
+  version_requirements: *id004
 - !ruby/object:Gem::Dependency 
   name: rspec
   prerelease: false
-  requirement: &id006 !ruby/object:Gem::Requirement 
+  requirement: &id005 !ruby/object:Gem::Requirement 
     none: false
     requirements: 
     - - ~>
@@ -110,11 +94,11 @@ dependencies:
         - 5
         version: "2.5"
   type: :development
-  version_requirements: *id006
+  version_requirements: *id005
 - !ruby/object:Gem::Dependency 
   name: escoffier
   prerelease: false
-  requirement: &id007 !ruby/object:Gem::Requirement 
+  requirement: &id006 !ruby/object:Gem::Requirement 
     none: false
     requirements: 
     - - ">="
@@ -124,7 +108,7 @@ dependencies:
         - 0
         version: "0"
   type: :development
-  version_requirements: *id007
+  version_requirements: *id006
 description: Extraction of MRI metadata.
 email: ekk@medicine.wisc.edu
 executables: