mdarray 0.5.4-java → 0.5.5-java
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- data/LICENSE.txt +35 -16
- data/README.md +180 -234
- data/lib/colt/matrix/algebra.rb +466 -0
- data/lib/colt/matrix/colt_matrix.rb +161 -220
- data/lib/colt/matrix/creation.rb +374 -0
- data/lib/colt/matrix/{matrix_hierarchy.rb → hierarchy.rb} +78 -99
- data/lib/colt/matrix/property.rb +363 -0
- data/lib/mdarray/views.rb +46 -1
- data/test/colt/matrix/test_complete.rb +29 -0
- data/test/colt/{test_matrix.rb → matrix/test_creation.rb} +26 -3
- data/test/colt/{test_double_matrix2d.rb → matrix/test_matrix1d_floatingalgebra.rb} +86 -84
- data/test/colt/matrix/test_matrix2d_fixpointalgebra.rb +531 -0
- data/test/colt/matrix/test_matrix2d_floatingalgebra.rb +693 -0
- data/test/colt/matrix/test_operations.rb +120 -0
- data/test/colt/matrix/test_properties.rb +649 -0
- data/test/colt/test_complete.rb +1 -1
- data/test/complete.rb +12 -7
- data/test/mdarray/test_views.rb +55 -0
- data/vendor/{incanter.jar → mdarray.jar} +0 -0
- data/version.rb +1 -1
- metadata +22 -16
- data/lib/colt/matrix/matrix2D_floating_algebra.rb +0 -325
- data/test/colt/test_float_matrix2d.rb +0 -171
- data/vendor/commons-compiler.jar +0 -0
- data/vendor/janino.jar +0 -0
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# -*- coding: utf-8 -*-
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##########################################################################################
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# Copyright © 2013 Rodrigo Botafogo. All Rights Reserved. Permission to use, copy, modify,
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# and distribute this software and its documentation, without fee and without a signed
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# licensing agreement, is hereby granted, provided that the above copyright notice, this
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# paragraph and the following two paragraphs appear in all copies, modifications, and
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# distributions.
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#
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# IN NO EVENT SHALL RODRIGO BOTAFOGO BE LIABLE TO ANY PARTY FOR DIRECT, INDIRECT, SPECIAL,
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# INCIDENTAL, OR CONSEQUENTIAL DAMAGES, INCLUDING LOST PROFITS, ARISING OUT OF THE USE OF
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# THIS SOFTWARE AND ITS DOCUMENTATION, EVEN IF RODRIGO BOTAFOGO HAS BEEN ADVISED OF THE
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# POSSIBILITY OF SUCH DAMAGE.
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#
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# RODRIGO BOTAFOGO SPECIFICALLY DISCLAIMS ANY WARRANTIES, INCLUDING, BUT NOT LIMITED TO,
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# THE IMPLIED WARRANTIES OF MERCHANTABILITY AND FITNESS FOR A PARTICULAR PURPOSE. THE
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# SOFTWARE AND ACCOMPANYING DOCUMENTATION, IF ANY, PROVIDED HEREUNDER IS PROVIDED "AS IS".
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# RODRIGO BOTAFOGO HAS NO OBLIGATION TO PROVIDE MAINTENANCE, SUPPORT, UPDATES, ENHANCEMENTS,
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# OR MODIFICATIONS.
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##########################################################################################
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require 'rubygems'
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require "test/unit"
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require 'shoulda'
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require 'mdarray'
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class MDArrayTest < Test::Unit::TestCase
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context "Colt Matrix" do
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setup do
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end
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#-------------------------------------------------------------------------------------
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#
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#-------------------------------------------------------------------------------------
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should "test multiple matrix operations" do
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# Dot product (or inner product of scalar product) of 2 vectors
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x = MDMatrix.double([3], [1, -2, 0.0])
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y = MDMatrix.double([3], [2, 5, -1.0])
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assert_equal(-8.0, x * y)
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# Matrix product.
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a = MDMatrix.double([3, 3], [3.2, -1, 2, 2, -2, 4, 1.5,-1,-4])
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b = MDMatrix.double([3, 2], [1.0, 2.0, -1.0, 2.0, 2, -1.5])
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product = a * b
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product.print
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printf("\n\n")
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# Matrix-vector product
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x = MDMatrix.double([3], [1, -2, 0.0])
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result = a * x
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result.print
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printf("\n\n")
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# transpose matrix
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a.transpose.print
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printf("\n\n")
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# trace
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assert_equal(-2.8, a.trace)
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# Determinant and inverse
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assert_equal(26.400000000000002, a.det)
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a.inverse.print
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printf("\n\n")
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# Eigenvalue and Eigenvectors
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eig = a.eig
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# eigenvalue matrix
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eig[0].print
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printf("\n\n")
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eig[1].print
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printf("\n\n")
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eig[2].print
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printf("\n\n")
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eig[3].print
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printf("\n\n")
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end
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end
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end
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=begin
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Diagonal, transpose and trace
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[Not yet a good way of working with the diagonal in MDMatrix]
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>>> print sp.diagonal(A) #returns the diagonal of A
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array([ 3.2, -2., -4.])
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>>> D = sp.diag((1, 2, 3)) # return a diagonal matrix
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[[1 0 0]
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[0 2 0]
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[0 0 3]]
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1.2 Eigenvalue and Eigenvectors
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[Value from NunPy and MDMatrix are different... is this wrong?!]
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>>> print e_vectors # row i corresponds to the eigenvector
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# associated with eigenvalues i
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[[ 0.88158576+0.j, -0.25687900+0.02847007j, -0.25687900-0.02847007j]
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[ 0.45531661+0.j, -0.89064266+0.j, -0.89064266+0.j ]
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[ 0.12447222+0.j, 0.32503863-0.18522464j, 0.32503863+0.18522464j]]
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3 x 3 matrix
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0,881586 1,37094 0,510170
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0,455317 4,50194 2,26780
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0,124472 -2,11460 0,108628
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=end
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# -*- coding: utf-8 -*-
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##########################################################################################
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# Copyright © 2013 Rodrigo Botafogo. All Rights Reserved. Permission to use, copy, modify,
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# and distribute this software and its documentation, without fee and without a signed
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# licensing agreement, is hereby granted, provided that the above copyright notice, this
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# paragraph and the following two paragraphs appear in all copies, modifications, and
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# distributions.
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#
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# IN NO EVENT SHALL RODRIGO BOTAFOGO BE LIABLE TO ANY PARTY FOR DIRECT, INDIRECT, SPECIAL,
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# INCIDENTAL, OR CONSEQUENTIAL DAMAGES, INCLUDING LOST PROFITS, ARISING OUT OF THE USE OF
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# THIS SOFTWARE AND ITS DOCUMENTATION, EVEN IF RODRIGO BOTAFOGO HAS BEEN ADVISED OF THE
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# POSSIBILITY OF SUCH DAMAGE.
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#
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# RODRIGO BOTAFOGO SPECIFICALLY DISCLAIMS ANY WARRANTIES, INCLUDING, BUT NOT LIMITED TO,
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# THE IMPLIED WARRANTIES OF MERCHANTABILITY AND FITNESS FOR A PARTICULAR PURPOSE. THE
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# SOFTWARE AND ACCOMPANYING DOCUMENTATION, IF ANY, PROVIDED HEREUNDER IS PROVIDED "AS IS".
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# RODRIGO BOTAFOGO HAS NO OBLIGATION TO PROVIDE MAINTENANCE, SUPPORT, UPDATES, ENHANCEMENTS,
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# OR MODIFICATIONS.
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##########################################################################################
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require 'rubygems'
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require "test/unit"
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require 'shoulda'
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require 'mdarray'
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class MDArrayTest < Test::Unit::TestCase
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context "Colt Matrix" do
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setup do
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end
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#-------------------------------------------------------------------------------------
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#
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#-------------------------------------------------------------------------------------
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should "test double matrices properties" do
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d1 = MDArray.typed_arange("double", 0, 90)
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d1.reshape!([5, 3, 6])
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# take a slice of d1 on the first dimension (0) and taking only the first (0) index.
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d2 = d1.slice(0, 0)
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m1 = MDMatrix.from_mdarray(d2)
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d2 = d1.slice(0, 1)
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m2 = MDMatrix.from_mdarray(d2)
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d2 = d1.slice(1, 1)
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m3 = MDMatrix.from_mdarray(d2)
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rect = MDMatrix.from_mdarray(d1.reshape([5, 3, 6])
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.region(:spec => "0:4, 0:2, 0:0", :reduce => true))
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square = MDMatrix.from_mdarray(d1.reshape([5, 3, 6])
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.region(:spec => "0:2, 0:2, 0:0", :reduce => true))
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# identity matrix
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identity = MDMatrix.fromfunction("double", [5, 5]) { |i, j| 1 if i == j }
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# diagonaly dominant matrix by row and column
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diag_dominant = MDMatrix.fromfunction("double", [4, 4]) do |x, y|
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(x == y)? 5 * (x +1) + 5 * (y + 1) : x + y
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end
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# upper diagonal matrix
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ud = MDMatrix.fromfunction("double", [4, 4]) { |x, y| x + y if x < y }
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# lower diagonal matrix
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ld = MDMatrix.fromfunction("double", [4, 4]) { |x, y| x + y if x > y }
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c2 = MDMatrix.double([2, 2], [2, 2, 2, 2])
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# zero matrix
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zero = MDMatrix.double([3, 3])
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# Checks whether the given matrix A is rectangular, i.e., if columns >= rows.
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# If not rectangular raise exception, otherwise, does nothing.
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assert_raise ( RuntimeError ) { m1.check_rectangular }
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rect.check_rectangular
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# Checks that the matrix is a square matrix. If not, raises an exception
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assert_raise ( RuntimeError ) { rect.check_square }
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square.check_square
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# Returns the matrix's fraction of non-zero cells; A.cardinality() / A.size().
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assert_equal(0.8888888888888888, square.density)
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# array square is not diagnonal
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assert_equal(false, square.diagonal?)
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#------------------------------------------------------------------------------------
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# A matrix A is diagonally dominant by column if the absolute value of each diagonal
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# element is larger than the sum of the absolute values of the off-diagonal elements
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# in the corresponding column. returns true if for all i: abs(A[i,i]) >
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# Sum(abs(A[j,i])); j != i. Matrix may but need not be square.
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#
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# Note: Ignores tolerance.
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#------------------------------------------------------------------------------------
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assert_equal(true, diag_dominant.diagonally_dominant_by_column?)
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assert_equal(false, square.diagonally_dominant_by_column?)
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#------------------------------------------------------------------------------------
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# A matrix A is diagonally dominant by row if the absolute value of each diagonal
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# element is larger than the sum of the absolute values of the off-diagonal elements in
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# the corresponding row. returns true if for all i: abs(A[i,i]) > Sum(abs(A[i,j]));
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# j != i. Matrix may but need not be square.
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#
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# Note: Ignores tolerance.
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#------------------------------------------------------------------------------------
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assert_equal(true, diag_dominant.diagonally_dominant_by_row?)
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non_sing = square.copy
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# modifies the matrix to a non-singular matrix
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non_sing.generate_non_singular!
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assert_equal(true, c2.equals?(2))
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assert_equal(true, identity.equals?(identity))
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assert_equal(false, c2.equals?(identity))
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assert_equal(true, identity.identity?)
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assert_equal(true, zero.lower_bidiagonal?)
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assert_equal(true, ld.lower_triangular?)
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assert_equal(true, c2.non_negative?)
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assert_equal(false, c2.orthogonal?)
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assert_equal(true, identity.orthogonal?)
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assert_equal(true, c2.positive?)
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assert_equal(true, c2.singular?)
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assert_equal(false, non_sing.singular?)
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# making a skew symmetric matrix by building the upper part and the lower part and
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# adding them together
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l = MDArray.fromfunction("double", [5, 5]) do |x, y|
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x + y if x > y
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end
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lt = MDMatrix.from_mdarray(l)
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u = MDArray.fromfunction("double", [5, 5]) do |x, y|
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-(x + y) if x < y
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end
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ut = MDMatrix.from_mdarray(u)
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ss = MDMatrix.from_mdarray(u + l)
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assert_equal(true, ss.skew_symmetric?)
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assert_equal(true, square.square?)
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assert_equal(false, rect.square?)
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assert_equal(true, lt.strictly_lower_triangular?)
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assert_equal(false, ut.strictly_lower_triangular?)
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assert_equal(true, lt.strictly_triangular?)
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assert_equal(true, ut.strictly_triangular?)
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assert_equal(true, ut.strictly_upper_triangular?)
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assert_equal(true, c2.symmetric?)
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assert_equal(true, ut.triangular?)
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tri = MDArray.fromfunction("double", [5, 6]) do |i, j|
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((i - j).abs > 1)? 0 : i + j
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end
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assert_equal(true, MDMatrix.from_mdarray(tri).tridiagonal?)
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unittri = MDArray.fromfunction("double", [5, 6]) do |i, j|
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(i > j)? i + j : ((i == j)? 1 : 0)
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end
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assert_equal(true, MDMatrix.from_mdarray(unittri).unit_triangular?)
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upbi = MDArray.fromfunction("double", [5, 6]) do |i, j|
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((i == j) || (i == j-1))? i + j : 0
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end
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assert_equal(true, MDMatrix.from_mdarray(upbi).upper_bidiagonal?)
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assert_equal(true, ut.upper_triangular?)
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assert_equal(true, zero.zero?)
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assert_equal(3, diag_dominant.lower_bandwidth)
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assert_equal(4, diag_dominant.semi_bandwidth)
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assert_equal(3, diag_dominant.upper_bandwidth)
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diag_dominant.properties
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end
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#-------------------------------------------------------------------------------------
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#
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#-------------------------------------------------------------------------------------
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should "test float matrices properties" do
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d1 = MDArray.typed_arange("float", 0, 90)
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d1.reshape!([5, 3, 6])
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# take a slice of d1 on the first dimension (0) and taking only the first (0) index.
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d2 = d1.slice(0, 0)
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m1 = MDMatrix.from_mdarray(d2)
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d2 = d1.slice(0, 1)
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m2 = MDMatrix.from_mdarray(d2)
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d2 = d1.slice(1, 1)
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m3 = MDMatrix.from_mdarray(d2)
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rect = MDMatrix.from_mdarray(d1.reshape([5, 3, 6])
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.region(:spec => "0:4, 0:2, 0:0", :reduce => true))
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square = MDMatrix.from_mdarray(d1.reshape([5, 3, 6])
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.region(:spec => "0:2, 0:2, 0:0", :reduce => true))
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# identity matrix
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identity = MDMatrix
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.from_mdarray(MDArray.fromfunction("float", [5, 5]) { |x, y| 1 if x == y })
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# diagonaly dominant matrix by row and column
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diag_dominant = MDMatrix
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+
.from_mdarray(MDArray.fromfunction("float", [4, 4]) do |x, y|
|
212
|
+
if (x == y)
|
213
|
+
5 * (x +1) + 5 * (y + 1)
|
214
|
+
else
|
215
|
+
x + y
|
216
|
+
end
|
217
|
+
end)
|
218
|
+
|
219
|
+
# upper diagonal matrix
|
220
|
+
ud = MDMatrix
|
221
|
+
.from_mdarray(MDArray.fromfunction("float", [4, 4]) { |x, y|
|
222
|
+
x + y if x < y })
|
223
|
+
|
224
|
+
# lower diagonal matrix
|
225
|
+
ld = MDMatrix
|
226
|
+
.from_mdarray(MDArray.fromfunction("float", [4, 4]) { |x, y|
|
227
|
+
x + y if x > y })
|
228
|
+
|
229
|
+
c2 = MDMatrix.from_mdarray(MDArray.float([2, 2], [2, 2, 2, 2]))
|
230
|
+
|
231
|
+
# zero matrix
|
232
|
+
zero = MDMatrix.from_mdarray(MDArray.float([3, 3]))
|
233
|
+
|
234
|
+
# Checks whether the given matrix A is rectangular, i.e., if columns >= rows.
|
235
|
+
# If not rectangular raise exception, otherwise, does nothing.
|
236
|
+
assert_raise ( RuntimeError ) { m1.check_rectangular }
|
237
|
+
rect.check_rectangular
|
238
|
+
|
239
|
+
# Checks that the matrix is a square matrix. If not, raises an exception
|
240
|
+
assert_raise ( RuntimeError ) { rect.check_square }
|
241
|
+
square.check_square
|
242
|
+
|
243
|
+
# Returns the matrix's fraction of non-zero cells; A.cardinality() / A.size().
|
244
|
+
assert_equal(0.8888888955116272, square.density)
|
245
|
+
|
246
|
+
# array square is not diagnonal
|
247
|
+
assert_equal(false, square.diagonal?)
|
248
|
+
|
249
|
+
#------------------------------------------------------------------------------------
|
250
|
+
# A matrix A is diagonally dominant by column if the absolute value of each diagonal
|
251
|
+
# element is larger than the sum of the absolute values of the off-diagonal elements
|
252
|
+
# in the corresponding column. returns true if for all i: abs(A[i,i]) >
|
253
|
+
# Sum(abs(A[j,i])); j != i. Matrix may but need not be square.
|
254
|
+
#
|
255
|
+
# Note: Ignores tolerance.
|
256
|
+
#------------------------------------------------------------------------------------
|
257
|
+
assert_equal(true, diag_dominant.diagonally_dominant_by_column?)
|
258
|
+
assert_equal(false, square.diagonally_dominant_by_column?)
|
259
|
+
|
260
|
+
#------------------------------------------------------------------------------------
|
261
|
+
# A matrix A is diagonally dominant by row if the absolute value of each diagonal
|
262
|
+
# element is larger than the sum of the absolute values of the off-diagonal elements in
|
263
|
+
# the corresponding row. returns true if for all i: abs(A[i,i]) > Sum(abs(A[i,j]));
|
264
|
+
# j != i. Matrix may but need not be square.
|
265
|
+
#
|
266
|
+
# Note: Ignores tolerance.
|
267
|
+
#------------------------------------------------------------------------------------
|
268
|
+
assert_equal(true, diag_dominant.diagonally_dominant_by_row?)
|
269
|
+
|
270
|
+
non_sing = square.copy
|
271
|
+
# modifies the matrix to a non-singular matrix
|
272
|
+
non_sing.generate_non_singular!
|
273
|
+
|
274
|
+
assert_equal(true, c2.equals?(2))
|
275
|
+
assert_equal(true, identity.equals?(identity))
|
276
|
+
assert_equal(false, c2.equals?(identity))
|
277
|
+
assert_equal(true, identity.identity?)
|
278
|
+
assert_equal(true, zero.lower_bidiagonal?)
|
279
|
+
assert_equal(true, ld.lower_triangular?)
|
280
|
+
assert_equal(true, c2.non_negative?)
|
281
|
+
assert_equal(false, c2.orthogonal?)
|
282
|
+
assert_equal(true, identity.orthogonal?)
|
283
|
+
assert_equal(true, c2.positive?)
|
284
|
+
assert_equal(true, c2.singular?)
|
285
|
+
assert_equal(false, non_sing.singular?)
|
286
|
+
|
287
|
+
# making a skew symmetric matrix by building the upper part and the lower part and
|
288
|
+
# adding them together
|
289
|
+
l = MDArray.fromfunction("float", [5, 5]) do |x, y|
|
290
|
+
x + y if x > y
|
291
|
+
end
|
292
|
+
lt = MDMatrix.from_mdarray(l)
|
293
|
+
|
294
|
+
u = MDArray.fromfunction("float", [5, 5]) do |x, y|
|
295
|
+
-(x + y) if x < y
|
296
|
+
end
|
297
|
+
ut = MDMatrix.from_mdarray(u)
|
298
|
+
ss = MDMatrix.from_mdarray(u + l)
|
299
|
+
|
300
|
+
assert_equal(true, ss.skew_symmetric?)
|
301
|
+
assert_equal(true, square.square?)
|
302
|
+
assert_equal(false, rect.square?)
|
303
|
+
assert_equal(true, lt.strictly_lower_triangular?)
|
304
|
+
assert_equal(false, ut.strictly_lower_triangular?)
|
305
|
+
assert_equal(true, lt.strictly_triangular?)
|
306
|
+
assert_equal(true, ut.strictly_triangular?)
|
307
|
+
assert_equal(true, ut.strictly_upper_triangular?)
|
308
|
+
assert_equal(true, c2.symmetric?)
|
309
|
+
assert_equal(true, ut.triangular?)
|
310
|
+
|
311
|
+
tri = MDArray.fromfunction("float", [5, 6]) do |i, j|
|
312
|
+
((i - j).abs > 1)? 0 : i + j
|
313
|
+
end
|
314
|
+
assert_equal(true, MDMatrix.from_mdarray(tri).tridiagonal?)
|
315
|
+
|
316
|
+
unittri = MDArray.fromfunction("float", [5, 6]) do |i, j|
|
317
|
+
(i > j)? i + j : ((i == j)? 1 : 0)
|
318
|
+
end
|
319
|
+
assert_equal(true, MDMatrix.from_mdarray(unittri).unit_triangular?)
|
320
|
+
|
321
|
+
upbi = MDArray.fromfunction("float", [5, 6]) do |i, j|
|
322
|
+
((i == j) || (i == j-1))? i + j : 0
|
323
|
+
end
|
324
|
+
assert_equal(true, MDMatrix.from_mdarray(upbi).upper_bidiagonal?)
|
325
|
+
|
326
|
+
assert_equal(true, ut.upper_triangular?)
|
327
|
+
assert_equal(true, zero.zero?)
|
328
|
+
assert_equal(3, diag_dominant.lower_bandwidth)
|
329
|
+
assert_equal(4, diag_dominant.semi_bandwidth)
|
330
|
+
assert_equal(3, diag_dominant.upper_bandwidth)
|
331
|
+
|
332
|
+
diag_dominant.properties
|
333
|
+
|
334
|
+
end
|
335
|
+
|
336
|
+
#-------------------------------------------------------------------------------------
|
337
|
+
#
|
338
|
+
#-------------------------------------------------------------------------------------
|
339
|
+
|
340
|
+
should "test long matrices properties" do
|
341
|
+
|
342
|
+
d1 = MDArray.typed_arange("long", 0, 90)
|
343
|
+
d1.reshape!([5, 3, 6])
|
344
|
+
|
345
|
+
# take a slice of d1 on the first dimension (0) and taking only the first (0) index.
|
346
|
+
d2 = d1.slice(0, 0)
|
347
|
+
m1 = MDMatrix.from_mdarray(d2)
|
348
|
+
|
349
|
+
d2 = d1.slice(0, 1)
|
350
|
+
m2 = MDMatrix.from_mdarray(d2)
|
351
|
+
|
352
|
+
d2 = d1.slice(1, 1)
|
353
|
+
m3 = MDMatrix.from_mdarray(d2)
|
354
|
+
|
355
|
+
rect = MDMatrix.from_mdarray(d1.reshape([5, 3, 6])
|
356
|
+
.region(:spec => "0:4, 0:2, 0:0", :reduce => true))
|
357
|
+
square = MDMatrix.from_mdarray(d1.reshape([5, 3, 6])
|
358
|
+
.region(:spec => "0:2, 0:2, 0:0", :reduce => true))
|
359
|
+
|
360
|
+
# identity matrix
|
361
|
+
identity = MDMatrix
|
362
|
+
.from_mdarray(MDArray.fromfunction("long", [5, 5]) { |x, y| 1 if x == y })
|
363
|
+
|
364
|
+
# diagonaly dominant matrix by row and column
|
365
|
+
diag_dominant = MDMatrix
|
366
|
+
.from_mdarray(MDArray.fromfunction("long", [4, 4]) do |x, y|
|
367
|
+
if (x == y)
|
368
|
+
5 * (x +1) + 5 * (y + 1)
|
369
|
+
else
|
370
|
+
x + y
|
371
|
+
end
|
372
|
+
end)
|
373
|
+
|
374
|
+
# upper diagonal matrix
|
375
|
+
ud = MDMatrix
|
376
|
+
.from_mdarray(MDArray.fromfunction("long", [4, 4]) { |x, y|
|
377
|
+
x + y if x < y })
|
378
|
+
|
379
|
+
# lower diagonal matrix
|
380
|
+
ld = MDMatrix
|
381
|
+
.from_mdarray(MDArray.fromfunction("long", [4, 4]) { |x, y|
|
382
|
+
x + y if x > y })
|
383
|
+
|
384
|
+
c2 = MDMatrix.from_mdarray(MDArray.long([2, 2], [2, 2, 2, 2]))
|
385
|
+
|
386
|
+
# zero matrix
|
387
|
+
zero = MDMatrix.from_mdarray(MDArray.long([3, 3]))
|
388
|
+
|
389
|
+
# Checks whether the given matrix A is rectangular, i.e., if columns >= rows.
|
390
|
+
# If not rectangular raise exception, otherwise, does nothing.
|
391
|
+
assert_raise ( RuntimeError ) { m1.check_rectangular }
|
392
|
+
rect.check_rectangular
|
393
|
+
|
394
|
+
# Checks that the matrix is a square matrix. If not, raises an exception
|
395
|
+
assert_raise ( RuntimeError ) { rect.check_square }
|
396
|
+
square.check_square
|
397
|
+
|
398
|
+
# Returns the matrix's fraction of non-zero cells; A.cardinality() / A.size().
|
399
|
+
assert_equal(0, square.density)
|
400
|
+
|
401
|
+
# array square is not diagnonal
|
402
|
+
assert_equal(false, square.diagonal?)
|
403
|
+
|
404
|
+
#------------------------------------------------------------------------------------
|
405
|
+
# A matrix A is diagonally dominant by column if the absolute value of each diagonal
|
406
|
+
# element is larger than the sum of the absolute values of the off-diagonal elements
|
407
|
+
# in the corresponding column. returns true if for all i: abs(A[i,i]) >
|
408
|
+
# Sum(abs(A[j,i])); j != i. Matrix may but need not be square.
|
409
|
+
#
|
410
|
+
# Note: Ignores tolerance.
|
411
|
+
#------------------------------------------------------------------------------------
|
412
|
+
assert_equal(true, diag_dominant.diagonally_dominant_by_column?)
|
413
|
+
assert_equal(false, square.diagonally_dominant_by_column?)
|
414
|
+
|
415
|
+
#------------------------------------------------------------------------------------
|
416
|
+
# A matrix A is diagonally dominant by row if the absolute value of each diagonal
|
417
|
+
# element is larger than the sum of the absolute values of the off-diagonal elements in
|
418
|
+
# the corresponding row. returns true if for all i: abs(A[i,i]) > Sum(abs(A[i,j]));
|
419
|
+
# j != i. Matrix may but need not be square.
|
420
|
+
#
|
421
|
+
# Note: Ignores tolerance.
|
422
|
+
#------------------------------------------------------------------------------------
|
423
|
+
assert_equal(true, diag_dominant.diagonally_dominant_by_row?)
|
424
|
+
|
425
|
+
non_sing = square.copy
|
426
|
+
# modifies the matrix to a non-singular matrix
|
427
|
+
non_sing.generate_non_singular!
|
428
|
+
|
429
|
+
assert_equal(true, c2.equals?(2))
|
430
|
+
assert_equal(true, identity.equals?(identity))
|
431
|
+
assert_equal(false, c2.equals?(identity))
|
432
|
+
assert_equal(true, identity.identity?)
|
433
|
+
assert_equal(true, zero.lower_bidiagonal?)
|
434
|
+
assert_equal(true, ld.lower_triangular?)
|
435
|
+
assert_equal(true, c2.non_negative?)
|
436
|
+
assert_equal(false, c2.orthogonal?)
|
437
|
+
assert_equal(true, identity.orthogonal?)
|
438
|
+
assert_equal(true, c2.positive?)
|
439
|
+
|
440
|
+
assert_raise( RuntimeError ) { c2.singular?}
|
441
|
+
assert_raise( RuntimeError ) { non_sing.singular? }
|
442
|
+
|
443
|
+
# making a skew symmetric matrix by building the upper part and the lower part and
|
444
|
+
# adding them together
|
445
|
+
l = MDArray.fromfunction("long", [5, 5]) do |x, y|
|
446
|
+
x + y if x > y
|
447
|
+
end
|
448
|
+
lt = MDMatrix.from_mdarray(l)
|
449
|
+
|
450
|
+
u = MDArray.fromfunction("long", [5, 5]) do |x, y|
|
451
|
+
-(x + y) if x < y
|
452
|
+
end
|
453
|
+
ut = MDMatrix.from_mdarray(u)
|
454
|
+
ss = MDMatrix.from_mdarray(u + l)
|
455
|
+
|
456
|
+
assert_equal(true, ss.skew_symmetric?)
|
457
|
+
assert_equal(true, square.square?)
|
458
|
+
assert_equal(false, rect.square?)
|
459
|
+
assert_equal(true, lt.strictly_lower_triangular?)
|
460
|
+
assert_equal(false, ut.strictly_lower_triangular?)
|
461
|
+
assert_equal(true, lt.strictly_triangular?)
|
462
|
+
assert_equal(true, ut.strictly_triangular?)
|
463
|
+
assert_equal(true, ut.strictly_upper_triangular?)
|
464
|
+
assert_equal(true, c2.symmetric?)
|
465
|
+
assert_equal(true, ut.triangular?)
|
466
|
+
|
467
|
+
tri = MDArray.fromfunction("long", [5, 6]) do |i, j|
|
468
|
+
((i - j).abs > 1)? 0 : i + j
|
469
|
+
end
|
470
|
+
assert_equal(true, MDMatrix.from_mdarray(tri).tridiagonal?)
|
471
|
+
|
472
|
+
unittri = MDArray.fromfunction("long", [5, 6]) do |i, j|
|
473
|
+
(i > j)? i + j : ((i == j)? 1 : 0)
|
474
|
+
end
|
475
|
+
assert_equal(true, MDMatrix.from_mdarray(unittri).unit_triangular?)
|
476
|
+
|
477
|
+
upbi = MDArray.fromfunction("long", [5, 6]) do |i, j|
|
478
|
+
((i == j) || (i == j-1))? i + j : 0
|
479
|
+
end
|
480
|
+
assert_equal(true, MDMatrix.from_mdarray(upbi).upper_bidiagonal?)
|
481
|
+
|
482
|
+
assert_equal(true, ut.upper_triangular?)
|
483
|
+
assert_equal(true, zero.zero?)
|
484
|
+
assert_equal(3, diag_dominant.lower_bandwidth)
|
485
|
+
assert_equal(4, diag_dominant.semi_bandwidth)
|
486
|
+
assert_equal(3, diag_dominant.upper_bandwidth)
|
487
|
+
|
488
|
+
diag_dominant.properties
|
489
|
+
|
490
|
+
end
|
491
|
+
|
492
|
+
#-------------------------------------------------------------------------------------
|
493
|
+
#
|
494
|
+
#-------------------------------------------------------------------------------------
|
495
|
+
|
496
|
+
should "test int matrices properties" do
|
497
|
+
|
498
|
+
d1 = MDArray.typed_arange("int", 0, 90)
|
499
|
+
d1.reshape!([5, 3, 6])
|
500
|
+
|
501
|
+
# take a slice of d1 on the first dimension (0) and taking only the first (0) index.
|
502
|
+
d2 = d1.slice(0, 0)
|
503
|
+
m1 = MDMatrix.from_mdarray(d2)
|
504
|
+
|
505
|
+
d2 = d1.slice(0, 1)
|
506
|
+
m2 = MDMatrix.from_mdarray(d2)
|
507
|
+
|
508
|
+
d2 = d1.slice(1, 1)
|
509
|
+
m3 = MDMatrix.from_mdarray(d2)
|
510
|
+
|
511
|
+
rect = MDMatrix.from_mdarray(d1.reshape([5, 3, 6])
|
512
|
+
.region(:spec => "0:4, 0:2, 0:0", :reduce => true))
|
513
|
+
square = MDMatrix.from_mdarray(d1.reshape([5, 3, 6])
|
514
|
+
.region(:spec => "0:2, 0:2, 0:0", :reduce => true))
|
515
|
+
|
516
|
+
# identity matrix
|
517
|
+
identity = MDMatrix
|
518
|
+
.from_mdarray(MDArray.fromfunction("int", [5, 5]) { |x, y| 1 if x == y })
|
519
|
+
|
520
|
+
# diagonaly dominant matrix by row and column
|
521
|
+
diag_dominant = MDMatrix
|
522
|
+
.from_mdarray(MDArray.fromfunction("int", [4, 4]) do |x, y|
|
523
|
+
if (x == y)
|
524
|
+
5 * (x +1) + 5 * (y + 1)
|
525
|
+
else
|
526
|
+
x + y
|
527
|
+
end
|
528
|
+
end)
|
529
|
+
|
530
|
+
# upper diagonal matrix
|
531
|
+
ud = MDMatrix
|
532
|
+
.from_mdarray(MDArray.fromfunction("int", [4, 4]) { |x, y|
|
533
|
+
x + y if x < y })
|
534
|
+
|
535
|
+
# lower diagonal matrix
|
536
|
+
ld = MDMatrix
|
537
|
+
.from_mdarray(MDArray.fromfunction("int", [4, 4]) { |x, y|
|
538
|
+
x + y if x > y })
|
539
|
+
|
540
|
+
c2 = MDMatrix.from_mdarray(MDArray.int([2, 2], [2, 2, 2, 2]))
|
541
|
+
|
542
|
+
# zero matrix
|
543
|
+
zero = MDMatrix.from_mdarray(MDArray.int([3, 3]))
|
544
|
+
|
545
|
+
# Checks whether the given matrix A is rectangular, i.e., if columns >= rows.
|
546
|
+
# If not rectangular raise exception, otherwise, does nothing.
|
547
|
+
assert_raise ( RuntimeError ) { m1.check_rectangular }
|
548
|
+
rect.check_rectangular
|
549
|
+
|
550
|
+
# Checks that the matrix is a square matrix. If not, raises an exception
|
551
|
+
assert_raise ( RuntimeError ) { rect.check_square }
|
552
|
+
square.check_square
|
553
|
+
|
554
|
+
# Returns the matrix's fraction of non-zero cells; A.cardinality() / A.size().
|
555
|
+
assert_equal(0, square.density)
|
556
|
+
|
557
|
+
# array square is not diagnonal
|
558
|
+
assert_equal(false, square.diagonal?)
|
559
|
+
|
560
|
+
#------------------------------------------------------------------------------------
|
561
|
+
# A matrix A is diagonally dominant by column if the absolute value of each diagonal
|
562
|
+
# element is larger than the sum of the absolute values of the off-diagonal elements
|
563
|
+
# in the corresponding column. returns true if for all i: abs(A[i,i]) >
|
564
|
+
# Sum(abs(A[j,i])); j != i. Matrix may but need not be square.
|
565
|
+
#
|
566
|
+
# Note: Ignores tolerance.
|
567
|
+
#------------------------------------------------------------------------------------
|
568
|
+
assert_equal(true, diag_dominant.diagonally_dominant_by_column?)
|
569
|
+
assert_equal(false, square.diagonally_dominant_by_column?)
|
570
|
+
|
571
|
+
#------------------------------------------------------------------------------------
|
572
|
+
# A matrix A is diagonally dominant by row if the absolute value of each diagonal
|
573
|
+
# element is larger than the sum of the absolute values of the off-diagonal elements in
|
574
|
+
# the corresponding row. returns true if for all i: abs(A[i,i]) > Sum(abs(A[i,j]));
|
575
|
+
# j != i. Matrix may but need not be square.
|
576
|
+
#
|
577
|
+
# Note: Ignores tolerance.
|
578
|
+
#------------------------------------------------------------------------------------
|
579
|
+
assert_equal(true, diag_dominant.diagonally_dominant_by_row?)
|
580
|
+
|
581
|
+
non_sing = square.copy
|
582
|
+
# modifies the matrix to a non-singular matrix
|
583
|
+
non_sing.generate_non_singular!
|
584
|
+
|
585
|
+
assert_equal(true, c2.equals?(2))
|
586
|
+
assert_equal(true, identity.equals?(identity))
|
587
|
+
assert_equal(false, c2.equals?(identity))
|
588
|
+
assert_equal(true, identity.identity?)
|
589
|
+
assert_equal(true, zero.lower_bidiagonal?)
|
590
|
+
assert_equal(true, ld.lower_triangular?)
|
591
|
+
assert_equal(true, c2.non_negative?)
|
592
|
+
assert_equal(false, c2.orthogonal?)
|
593
|
+
assert_equal(true, identity.orthogonal?)
|
594
|
+
assert_equal(true, c2.positive?)
|
595
|
+
assert_raise ( RuntimeError ) { c2.singular? }
|
596
|
+
assert_raise ( RuntimeError ) { non_sing.singular? }
|
597
|
+
|
598
|
+
# making a skew symmetric matrix by building the upper part and the lower part and
|
599
|
+
# adding them together
|
600
|
+
l = MDArray.fromfunction("int", [5, 5]) do |x, y|
|
601
|
+
x + y if x > y
|
602
|
+
end
|
603
|
+
lt = MDMatrix.from_mdarray(l)
|
604
|
+
|
605
|
+
u = MDArray.fromfunction("int", [5, 5]) do |x, y|
|
606
|
+
-(x + y) if x < y
|
607
|
+
end
|
608
|
+
ut = MDMatrix.from_mdarray(u)
|
609
|
+
ss = MDMatrix.from_mdarray(u + l)
|
610
|
+
|
611
|
+
assert_equal(true, ss.skew_symmetric?)
|
612
|
+
assert_equal(true, square.square?)
|
613
|
+
assert_equal(false, rect.square?)
|
614
|
+
assert_equal(true, lt.strictly_lower_triangular?)
|
615
|
+
assert_equal(false, ut.strictly_lower_triangular?)
|
616
|
+
assert_equal(true, lt.strictly_triangular?)
|
617
|
+
assert_equal(true, ut.strictly_triangular?)
|
618
|
+
assert_equal(true, ut.strictly_upper_triangular?)
|
619
|
+
assert_equal(true, c2.symmetric?)
|
620
|
+
assert_equal(true, ut.triangular?)
|
621
|
+
|
622
|
+
tri = MDArray.fromfunction("int", [5, 6]) do |i, j|
|
623
|
+
((i - j).abs > 1)? 0 : i + j
|
624
|
+
end
|
625
|
+
assert_equal(true, MDMatrix.from_mdarray(tri).tridiagonal?)
|
626
|
+
|
627
|
+
unittri = MDArray.fromfunction("int", [5, 6]) do |i, j|
|
628
|
+
(i > j)? i + j : ((i == j)? 1 : 0)
|
629
|
+
end
|
630
|
+
assert_equal(true, MDMatrix.from_mdarray(unittri).unit_triangular?)
|
631
|
+
|
632
|
+
upbi = MDArray.fromfunction("int", [5, 6]) do |i, j|
|
633
|
+
((i == j) || (i == j-1))? i + j : 0
|
634
|
+
end
|
635
|
+
assert_equal(true, MDMatrix.from_mdarray(upbi).upper_bidiagonal?)
|
636
|
+
|
637
|
+
assert_equal(true, ut.upper_triangular?)
|
638
|
+
assert_equal(true, zero.zero?)
|
639
|
+
assert_equal(3, diag_dominant.lower_bandwidth)
|
640
|
+
assert_equal(4, diag_dominant.semi_bandwidth)
|
641
|
+
assert_equal(3, diag_dominant.upper_bandwidth)
|
642
|
+
|
643
|
+
diag_dominant.properties
|
644
|
+
|
645
|
+
end
|
646
|
+
|
647
|
+
end
|
648
|
+
|
649
|
+
end
|