mascot-mgf 0.2.2 → 0.2.3

data/lib/mascot/mgf/query.rb

@@ -2,7 +2,7 @@ module Mascot
   class MGF
     class Query
 
-      attr_accessor :ions, :title, :pepmass, :entry, :charge
+      attr_accessor :ions, :title, :pepmass, :entry, :charge, :rtinseconds
 
       # Initializes a spectrum entry from a MGF formatted string or from an Array
       # that is the newline split of MGF 'BEGIN IONS\n...\nEND IONS'
@@ -15,6 +15,7 @@ module Mascot
         @atts = {}
         @ions = []
         @charge = nil
+        @rtinseconds = nil
         parse(entry)
       end
 
@@ -52,6 +53,8 @@ module Mascot
               @title = $2
             when "CHARGE"
               @charge = $2.to_i
+            when "RTINSECONDS"
+              @rtinseconds = $2.to_f
             else
               @atts[$1.downcase.to_sym] = $2
             end

data/lib/mascot/mgf/version.rb

@@ -1,5 +1,5 @@
 module Mascot
   class MGF < File
-    VERSION = "0.2.2"
+    VERSION = "0.2.3"
   end
 end

data/test/test_mascot-mgf.rb

@@ -48,7 +48,7 @@ class TestMascotMgf < Test::Unit::TestCase
     # move cursor to tenth query
     tenth_query = mgf.query(9)
     assert_equal(tenth_query_title, tenth_query.title)
-    assert_equal(tenth_query_rtinseconds, tenth_query_rtinseconds)
+    assert_equal(tenth_query_rtinseconds, tenth_query.rtinseconds)
     assert_equal(tenth_query_charge, tenth_query.charge)
     assert_equal(tenth_query_pepmass[0], tenth_query.pepmass[0])
     assert_equal(tenth_query_pepmass[1], tenth_query.pepmass[1])

metadata

@@ -1,7 +1,7 @@
 --- !ruby/object:Gem::Specification
 name: mascot-mgf
 version: !ruby/object:Gem::Version
-  version: 0.2.2
+  version: 0.2.3
   prerelease: 
 platform: ruby
 authors:
@@ -9,11 +9,11 @@ authors:
 autorequire: 
 bindir: bin
 cert_chain: []
-date: 2012-02-16 00:00:00.000000000 Z
+date: 2012-07-11 00:00:00.000000000 Z
 dependencies:
 - !ruby/object:Gem::Dependency
   name: rake
-  requirement: &70321602593720 !ruby/object:Gem::Requirement
+  requirement: &70230942814940 !ruby/object:Gem::Requirement
     none: false
     requirements:
     - - ! '>='
@@ -21,7 +21,7 @@ dependencies:
         version: '0'
   type: :development
   prerelease: false
-  version_requirements: *70321602593720
+  version_requirements: *70230942814940
 description: A parser for Mascot Generic Format (MGF) files
 email:
 - delagoya@gmail.com
@@ -57,7 +57,7 @@ required_ruby_version: !ruby/object:Gem::Requirement
       version: '0'
       segments:
       - 0
-      hash: -3179264156540033479
+      hash: 4477718745204745076
 required_rubygems_version: !ruby/object:Gem::Requirement
   none: false
   requirements:
@@ -66,7 +66,7 @@ required_rubygems_version: !ruby/object:Gem::Requirement
       version: '0'
       segments:
       - 0
-      hash: -3179264156540033479
+      hash: 4477718745204745076
 requirements: []
 rubyforge_project: 
 rubygems_version: 1.8.11