longleaf 0.2.0.pre.1 → 0.3.0
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- checksums.yaml +4 -4
- data/.circleci/config.yml +84 -0
- data/.gitignore +4 -2
- data/.rubocop.yml +42 -2
- data/.rubocop_todo.yml +390 -311
- data/.yardopts +1 -0
- data/Gemfile +16 -1
- data/README.md +67 -13
- data/Rakefile +6 -0
- data/bin/setup +16 -1
- data/docs/aboutlongleaf.md +28 -0
- data/docs/extra.css +32 -0
- data/docs/img/change-file.png +0 -0
- data/docs/img/ll-example-preserved.png +0 -0
- data/docs/index.md +19 -0
- data/docs/install.md +66 -0
- data/docs/ll-example/config-example-relative.yml +33 -0
- data/docs/ll-example/files-dir/LLexample-PDF.pdf +0 -0
- data/docs/ll-example/files-dir/LLexample-TOCHANGE.txt +15 -0
- data/docs/ll-example/files-dir/LLexample-tokeep.txt +10 -0
- data/docs/ll-example/metadata-dir/.gitkeep +0 -0
- data/docs/ll-example/replica-files/.gitkeep +0 -0
- data/docs/ll-example/replica-metadata/.gitkeep +0 -0
- data/docs/quickstart.md +270 -0
- data/docs/rdocs/Longleaf.html +135 -0
- data/docs/rdocs/Longleaf/AppFields.html +178 -0
- data/docs/rdocs/Longleaf/ApplicationConfigDeserializer.html +631 -0
- data/docs/rdocs/Longleaf/ApplicationConfigManager.html +610 -0
- data/docs/rdocs/Longleaf/ApplicationConfigValidator.html +238 -0
- data/docs/rdocs/Longleaf/CLI.html +909 -0
- data/docs/rdocs/Longleaf/ChecksumMismatchError.html +151 -0
- data/docs/rdocs/Longleaf/ConfigBuilder.html +1339 -0
- data/docs/rdocs/Longleaf/ConfigurationError.html +143 -0
- data/docs/rdocs/Longleaf/ConfigurationValidator.html +227 -0
- data/docs/rdocs/Longleaf/DeregisterCommand.html +420 -0
- data/docs/rdocs/Longleaf/DeregisterEvent.html +453 -0
- data/docs/rdocs/Longleaf/DeregistrationError.html +151 -0
- data/docs/rdocs/Longleaf/DigestHelper.html +419 -0
- data/docs/rdocs/Longleaf/EventError.html +147 -0
- data/docs/rdocs/Longleaf/EventNames.html +163 -0
- data/docs/rdocs/Longleaf/EventStatusTracking.html +656 -0
- data/docs/rdocs/Longleaf/FileCheckService.html +540 -0
- data/docs/rdocs/Longleaf/FileHelpers.html +520 -0
- data/docs/rdocs/Longleaf/FileRecord.html +716 -0
- data/docs/rdocs/Longleaf/FileSelector.html +901 -0
- data/docs/rdocs/Longleaf/FixityCheckService.html +691 -0
- data/docs/rdocs/Longleaf/IndexManager.html +1155 -0
- data/docs/rdocs/Longleaf/InvalidDigestAlgorithmError.html +143 -0
- data/docs/rdocs/Longleaf/InvalidStoragePathError.html +143 -0
- data/docs/rdocs/Longleaf/Logging.html +405 -0
- data/docs/rdocs/Longleaf/Logging/RedirectingLogger.html +1213 -0
- data/docs/rdocs/Longleaf/LongleafError.html +139 -0
- data/docs/rdocs/Longleaf/MDFields.html +193 -0
- data/docs/rdocs/Longleaf/MetadataBuilder.html +787 -0
- data/docs/rdocs/Longleaf/MetadataDeserializer.html +537 -0
- data/docs/rdocs/Longleaf/MetadataError.html +143 -0
- data/docs/rdocs/Longleaf/MetadataPersistenceManager.html +539 -0
- data/docs/rdocs/Longleaf/MetadataRecord.html +1411 -0
- data/docs/rdocs/Longleaf/MetadataSerializer.html +786 -0
- data/docs/rdocs/Longleaf/PreservationServiceError.html +147 -0
- data/docs/rdocs/Longleaf/PreserveCommand.html +410 -0
- data/docs/rdocs/Longleaf/PreserveEvent.html +491 -0
- data/docs/rdocs/Longleaf/RegisterCommand.html +428 -0
- data/docs/rdocs/Longleaf/RegisterEvent.html +628 -0
- data/docs/rdocs/Longleaf/RegisteredFileSelector.html +446 -0
- data/docs/rdocs/Longleaf/RegistrationError.html +151 -0
- data/docs/rdocs/Longleaf/ReindexCommand.html +576 -0
- data/docs/rdocs/Longleaf/RsyncReplicationService.html +1180 -0
- data/docs/rdocs/Longleaf/SequelIndexDriver.html +1978 -0
- data/docs/rdocs/Longleaf/ServiceCandidateFilesystemIterator.html +572 -0
- data/docs/rdocs/Longleaf/ServiceCandidateIndexIterator.html +532 -0
- data/docs/rdocs/Longleaf/ServiceCandidateLocator.html +333 -0
- data/docs/rdocs/Longleaf/ServiceClassCache.html +725 -0
- data/docs/rdocs/Longleaf/ServiceDateHelper.html +425 -0
- data/docs/rdocs/Longleaf/ServiceDefinition.html +683 -0
- data/docs/rdocs/Longleaf/ServiceDefinitionManager.html +371 -0
- data/docs/rdocs/Longleaf/ServiceDefinitionValidator.html +269 -0
- data/docs/rdocs/Longleaf/ServiceFields.html +173 -0
- data/docs/rdocs/Longleaf/ServiceManager.html +1229 -0
- data/docs/rdocs/Longleaf/ServiceMappingManager.html +410 -0
- data/docs/rdocs/Longleaf/ServiceMappingValidator.html +347 -0
- data/docs/rdocs/Longleaf/ServiceRecord.html +821 -0
- data/docs/rdocs/Longleaf/StorageLocation.html +985 -0
- data/docs/rdocs/Longleaf/StorageLocationManager.html +729 -0
- data/docs/rdocs/Longleaf/StorageLocationUnavailableError.html +143 -0
- data/docs/rdocs/Longleaf/StorageLocationValidator.html +373 -0
- data/docs/rdocs/Longleaf/StoragePathValidator.html +253 -0
- data/docs/rdocs/Longleaf/SystemConfigBuilder.html +441 -0
- data/docs/rdocs/Longleaf/SystemConfigFields.html +163 -0
- data/docs/rdocs/Longleaf/ValidateConfigCommand.html +451 -0
- data/docs/rdocs/Longleaf/ValidateMetadataCommand.html +408 -0
- data/docs/rdocs/_index.html +660 -0
- data/docs/rdocs/class_list.html +51 -0
- data/docs/rdocs/css/common.css +1 -0
- data/docs/rdocs/css/full_list.css +58 -0
- data/docs/rdocs/css/style.css +496 -0
- data/docs/rdocs/file.README.html +165 -0
- data/docs/rdocs/file_list.html +56 -0
- data/docs/rdocs/frames.html +17 -0
- data/docs/rdocs/index.html +165 -0
- data/docs/rdocs/js/app.js +303 -0
- data/docs/rdocs/js/full_list.js +216 -0
- data/docs/rdocs/js/jquery.js +4 -0
- data/docs/rdocs/method_list.html +2051 -0
- data/docs/rdocs/top-level-namespace.html +110 -0
- data/lib/longleaf/candidates/file_selector.rb +47 -15
- data/lib/longleaf/candidates/registered_file_selector.rb +67 -0
- data/lib/longleaf/candidates/service_candidate_filesystem_iterator.rb +29 -35
- data/lib/longleaf/candidates/service_candidate_index_iterator.rb +84 -0
- data/lib/longleaf/candidates/service_candidate_locator.rb +9 -4
- data/lib/longleaf/cli.rb +162 -80
- data/lib/longleaf/commands/deregister_command.rb +12 -11
- data/lib/longleaf/commands/preserve_command.rb +13 -8
- data/lib/longleaf/commands/register_command.rb +9 -6
- data/lib/longleaf/commands/reindex_command.rb +92 -0
- data/lib/longleaf/commands/validate_config_command.rb +27 -6
- data/lib/longleaf/commands/validate_metadata_command.rb +11 -9
- data/lib/longleaf/errors.rb +12 -12
- data/lib/longleaf/events/deregister_event.rb +13 -15
- data/lib/longleaf/events/event_status_tracking.rb +7 -7
- data/lib/longleaf/events/preserve_event.rb +24 -14
- data/lib/longleaf/events/register_event.rb +21 -35
- data/lib/longleaf/helpers/digest_helper.rb +4 -4
- data/lib/longleaf/helpers/service_date_helper.rb +5 -6
- data/lib/longleaf/indexing/index_manager.rb +101 -0
- data/lib/longleaf/indexing/sequel_index_driver.rb +324 -0
- data/lib/longleaf/logging.rb +4 -4
- data/lib/longleaf/logging/redirecting_logger.rb +20 -20
- data/lib/longleaf/models/app_fields.rb +2 -1
- data/lib/longleaf/models/file_record.rb +10 -6
- data/lib/longleaf/models/md_fields.rb +1 -1
- data/lib/longleaf/models/metadata_record.rb +22 -12
- data/lib/longleaf/models/service_definition.rb +3 -3
- data/lib/longleaf/models/service_fields.rb +1 -1
- data/lib/longleaf/models/service_record.rb +6 -5
- data/lib/longleaf/models/storage_location.rb +26 -7
- data/lib/longleaf/models/system_config_fields.rb +9 -0
- data/lib/longleaf/preservation_services/file_check_service.rb +58 -0
- data/lib/longleaf/preservation_services/fixity_check_service.rb +16 -14
- data/lib/longleaf/preservation_services/rsync_replication_service.rb +32 -31
- data/lib/longleaf/services/application_config_deserializer.rb +55 -18
- data/lib/longleaf/services/application_config_manager.rb +16 -4
- data/lib/longleaf/services/application_config_validator.rb +1 -2
- data/lib/longleaf/services/configuration_validator.rb +6 -4
- data/lib/longleaf/services/metadata_deserializer.rb +40 -38
- data/lib/longleaf/services/metadata_persistence_manager.rb +46 -0
- data/lib/longleaf/services/metadata_serializer.rb +23 -22
- data/lib/longleaf/services/service_class_cache.rb +15 -15
- data/lib/longleaf/services/service_definition_manager.rb +5 -6
- data/lib/longleaf/services/service_definition_validator.rb +5 -6
- data/lib/longleaf/services/service_manager.rb +37 -17
- data/lib/longleaf/services/service_mapping_manager.rb +9 -9
- data/lib/longleaf/services/service_mapping_validator.rb +9 -10
- data/lib/longleaf/services/storage_location_manager.rb +22 -8
- data/lib/longleaf/services/storage_location_validator.rb +11 -8
- data/lib/longleaf/services/storage_path_validator.rb +1 -1
- data/lib/longleaf/specs/config_builder.rb +30 -17
- data/lib/longleaf/specs/custom_matchers.rb +1 -1
- data/lib/longleaf/specs/file_helpers.rb +15 -14
- data/lib/longleaf/specs/metadata_builder.rb +91 -0
- data/lib/longleaf/specs/system_config_builder.rb +27 -0
- data/lib/longleaf/version.rb +1 -1
- data/longleaf.gemspec +17 -7
- data/mkdocs.yml +20 -0
- metadata +233 -22
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— Documentation by YARD 0.9.19
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<strong class="modules">Modules:</strong> <span class='object_link'><a href="Longleaf.html" title="Longleaf (module)">Longleaf</a></span>
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Generated on Tue May 28 15:48:00 2019 by
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<a href="http://yardoc.org" title="Yay! A Ruby Documentation Tool" target="_parent">yard</a>
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0.9.19 (ruby-2.6.3).
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# Selects and allows for iteration over files which match a provided set of selection criteria
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class FileSelector
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include Longleaf::Logging
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SPECIFICITY_PATH = 'path'
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SPECIFICITY_STORAGE_LOCATION = 'storage_location'
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attr_reader :specificity
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def initialize(file_paths: nil, storage_locations: nil, app_config:)
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# The set of storage locations to select file paths from
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# @return [Array] a list of top level paths from which files will be selected
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138
|
end
|
107
|
-
end
|
139
|
+
end
|
@@ -0,0 +1,67 @@
|
|
1
|
+
require 'longleaf/candidates/file_selector'
|
2
|
+
require 'longleaf/logging'
|
3
|
+
|
4
|
+
module Longleaf
|
5
|
+
# Selects and allows for iteration over files which are registered and match a provided
|
6
|
+
# set of selection criteria
|
7
|
+
class RegisteredFileSelector < FileSelector
|
8
|
+
include Longleaf::Logging
|
9
|
+
|
10
|
+
# Get the next file path for this selector.
|
11
|
+
# @raise [InvalidStoragePathError] if any of the selected files do not exist
|
12
|
+
# @raise [StorageLocationUnavailableError] if any of the selected paths are not
|
13
|
+
# in a registered storage location.
|
14
|
+
# @return [String] an absolute path to the next file targeted by this selector,
|
15
|
+
# or nil if no more files selected
|
16
|
+
def next_path
|
17
|
+
if @md_paths.nil?
|
18
|
+
# Compute the starting paths by looking up the metadata paths for the provided targets,
|
19
|
+
# in reverse order since @md_paths is a LIFO stack structure.
|
20
|
+
@md_paths = target_paths.reverse_each.map do |file_path|
|
21
|
+
storage_loc = @app_config.location_manager.verify_path_in_location(file_path)
|
22
|
+
storage_loc.get_metadata_path_for(file_path)
|
23
|
+
end
|
24
|
+
end
|
25
|
+
|
26
|
+
# No more paths to return
|
27
|
+
return nil if @md_paths&.empty?
|
28
|
+
|
29
|
+
# Get the most recently added path for depth first traversal of selected paths
|
30
|
+
md_path = @md_paths.pop
|
31
|
+
until md_path.nil? do
|
32
|
+
if File.exist?(md_path)
|
33
|
+
if File.directory?(md_path)
|
34
|
+
logger.debug("Expanding metadata directory #{md_path}")
|
35
|
+
# For a directory, add all children to file_paths
|
36
|
+
Dir.entries(md_path).sort.reverse_each do |child|
|
37
|
+
@md_paths << File.join(md_path, child) unless child == '.' or child == '..'
|
38
|
+
end
|
39
|
+
elsif md_path.end_with?(MetadataSerializer::metadata_suffix)
|
40
|
+
# Convert metadata path to file path before returning
|
41
|
+
return file_path_for_metadata(md_path)
|
42
|
+
else
|
43
|
+
logger.debug("Skipping non-metadata file in metadata directory #{md_path}")
|
44
|
+
end
|
45
|
+
else
|
46
|
+
file_path = file_path_for_metadata(md_path)
|
47
|
+
if File.exist?(file_path)
|
48
|
+
raise RegistrationError.new("File #{file_path} is not registered.")
|
49
|
+
else
|
50
|
+
raise InvalidStoragePathError.new("File #{file_path} does not exist.")
|
51
|
+
end
|
52
|
+
end
|
53
|
+
|
54
|
+
# Returned path was not a suitable file, try the next path
|
55
|
+
md_path = @md_paths.pop
|
56
|
+
end
|
57
|
+
end
|
58
|
+
|
59
|
+
private
|
60
|
+
def file_path_for_metadata(md_path)
|
61
|
+
storage_loc = @app_config.location_manager.get_location_by_metadata_path(md_path)
|
62
|
+
file_path = storage_loc.get_path_from_metadata_path(md_path)
|
63
|
+
logger.debug("Returning next file #{file_path} for metadata path #{md_path}")
|
64
|
+
return file_path
|
65
|
+
end
|
66
|
+
end
|
67
|
+
end
|
@@ -1,5 +1,4 @@
|
|
1
1
|
require 'longleaf/services/service_manager'
|
2
|
-
require 'longleaf/services/metadata_deserializer'
|
3
2
|
require 'longleaf/events/event_names'
|
4
3
|
require 'longleaf/errors'
|
5
4
|
require 'longleaf/logging'
|
@@ -11,89 +10,84 @@ module Longleaf
|
|
11
10
|
# about service status.
|
12
11
|
class ServiceCandidateFilesystemIterator
|
13
12
|
include Longleaf::Logging
|
14
|
-
|
13
|
+
|
15
14
|
def initialize(file_selector, event, app_config, force = false)
|
16
15
|
@file_selector = file_selector
|
17
16
|
@event = event
|
18
17
|
@app_config = app_config
|
19
18
|
@force = force
|
20
19
|
end
|
21
|
-
|
22
|
-
# Get the file record for the next candidate which needs services run which match the
|
20
|
+
|
21
|
+
# Get the file record for the next candidate which needs services run which match the
|
23
22
|
# provided file_selector
|
24
23
|
# @return [FileRecord] file record of the next candidate with services needing to be run,
|
25
24
|
# or nil if there are no more candidates.
|
26
25
|
def next_candidate
|
27
26
|
loop do
|
28
|
-
|
29
|
-
|
30
|
-
|
31
|
-
|
32
|
-
|
33
|
-
|
34
|
-
|
35
|
-
|
36
|
-
|
37
|
-
|
38
|
-
|
39
|
-
next
|
40
|
-
end
|
41
|
-
|
42
|
-
file_rec.metadata_record = MetadataDeserializer.deserialize(file_path: file_rec.metadata_path,
|
43
|
-
digest_algs: storage_loc.metadata_digests)
|
44
|
-
|
45
|
-
# Return the file record if it needs any services run
|
46
|
-
return file_rec if needs_run?(file_rec)
|
47
|
-
rescue InvalidStoragePathError => e
|
48
|
-
logger.warn("Skipping candidate file: #{e.message}")
|
27
|
+
next_path = @file_selector.next_path
|
28
|
+
return nil if next_path.nil?
|
29
|
+
|
30
|
+
logger.debug("Evaluating candidate #{next_path}")
|
31
|
+
storage_loc = @app_config.location_manager.get_location_by_path(next_path)
|
32
|
+
file_rec = FileRecord.new(next_path, storage_loc)
|
33
|
+
|
34
|
+
# Skip over unregistered files
|
35
|
+
if !file_rec.metadata_present?
|
36
|
+
logger.debug("Ignoring unregistered file #{next_path}")
|
37
|
+
next
|
49
38
|
end
|
39
|
+
|
40
|
+
@app_config.md_manager.load(file_rec)
|
41
|
+
|
42
|
+
# Return the file record if it needs any services run
|
43
|
+
return file_rec if needs_run?(file_rec)
|
50
44
|
end
|
51
45
|
end
|
52
|
-
|
46
|
+
|
53
47
|
# Iterate through the candidates in this object and execute the provided block with each
|
54
48
|
# candidate. A block is required.
|
55
49
|
def each
|
56
50
|
file_rec = next_candidate
|
57
51
|
until file_rec.nil?
|
58
52
|
yield file_rec
|
59
|
-
|
53
|
+
|
60
54
|
file_rec = next_candidate
|
61
55
|
end
|
62
56
|
end
|
63
|
-
|
57
|
+
|
64
58
|
private
|
65
59
|
# Returns true if the file record contains any services which need to be run
|
66
60
|
def needs_run?(file_rec)
|
67
61
|
md_rec = file_rec.metadata_record
|
68
62
|
storage_loc = file_rec.storage_location
|
69
63
|
service_manager = @app_config.service_manager
|
70
|
-
|
64
|
+
|
71
65
|
# File is not a valid candidate for services if it is deregistered, unless performing cleanup
|
72
66
|
if @event != EventNames::CLEANUP && md_rec.deregistered?
|
73
67
|
logger.debug("Skipping deregistered file: #{file_rec.path}")
|
74
68
|
return false
|
75
69
|
end
|
76
|
-
|
70
|
+
|
77
71
|
expected_services = service_manager.list_services(
|
78
72
|
location: storage_loc.name,
|
79
73
|
event: @event)
|
80
|
-
|
74
|
+
|
81
75
|
# When in force mode, candidate needs a run as long as there are any services configured for it.
|
82
|
-
if @force && expected_services.
|
76
|
+
if @force && !expected_services.empty?
|
83
77
|
logger.debug("Forcing run needed for file: #{file_rec.path}")
|
84
78
|
return true
|
85
79
|
end
|
86
|
-
|
80
|
+
|
87
81
|
expected_services.each do |service_name|
|
88
82
|
if service_manager.service_needed?(service_name, md_rec)
|
89
83
|
logger.debug("Service #{service_name} needed for file: #{file_rec.path}")
|
90
84
|
return true
|
91
85
|
end
|
92
86
|
end
|
93
|
-
|
87
|
+
|
94
88
|
logger.debug("Run not needed for file: #{file_rec.path}")
|
95
89
|
# No services needed to be run for this file
|
96
90
|
false
|
97
91
|
end
|
98
92
|
end
|
99
|
-
end
|
93
|
+
end
|
@@ -0,0 +1,84 @@
|
|
1
|
+
require 'longleaf/events/event_names'
|
2
|
+
require 'longleaf/errors'
|
3
|
+
require 'longleaf/logging'
|
4
|
+
require 'time'
|
5
|
+
|
6
|
+
module Longleaf
|
7
|
+
# Iterator for getting file candidates which have services which need to be run.
|
8
|
+
# Implementation uses an index of file metadata to determine if the file needs any
|
9
|
+
# services run.
|
10
|
+
class ServiceCandidateIndexIterator
|
11
|
+
include Longleaf::Logging
|
12
|
+
|
13
|
+
def initialize(file_selector, event, app_config, force = false)
|
14
|
+
@file_selector = file_selector
|
15
|
+
@event = event
|
16
|
+
@app_config = app_config
|
17
|
+
@force = force
|
18
|
+
@index_manager = @app_config.index_manager
|
19
|
+
@stale_datetime = Time.now.utc
|
20
|
+
@result_set = nil
|
21
|
+
end
|
22
|
+
|
23
|
+
# Get the file record for the next candidate which needs services run which match the
|
24
|
+
# provided file_selector
|
25
|
+
# @return [FileRecord] file record of the next candidate with services needing to be run,
|
26
|
+
# or nil if there are no more candidates.
|
27
|
+
def next_candidate
|
28
|
+
file_rec = nil
|
29
|
+
# loop until a candidate with metadata is retrieved
|
30
|
+
loop do
|
31
|
+
# Get the next page of results if the previous page has been processed
|
32
|
+
fetch_next_page if @result_set.nil? || @result_set.empty?
|
33
|
+
|
34
|
+
# Retrieve the next possible candidate path from the page
|
35
|
+
next_path = @result_set.shift
|
36
|
+
# given that the page was just retrieved, getting a nil path indicates that the retrieved page of
|
37
|
+
# candidates is empty and there are no more candidates to iterate at this time.
|
38
|
+
return nil if next_path.nil?
|
39
|
+
|
40
|
+
logger.debug("Retrieved candidate #{next_path}")
|
41
|
+
storage_loc = @app_config.location_manager.get_location_by_path(next_path)
|
42
|
+
file_rec = FileRecord.new(next_path, storage_loc)
|
43
|
+
|
44
|
+
# Keep seeking until a registered candidate is found, according to the file system.
|
45
|
+
if file_rec.metadata_present?
|
46
|
+
break
|
47
|
+
else
|
48
|
+
logger.warn("Encountered #{next_path} in index, but path is not registered. Clearing out of synch entry.")
|
49
|
+
@index_manager.remove(file_rec)
|
50
|
+
end
|
51
|
+
end
|
52
|
+
|
53
|
+
@app_config.md_manager.load(file_rec)
|
54
|
+
|
55
|
+
file_rec
|
56
|
+
end
|
57
|
+
|
58
|
+
# Iterate through the candidates in this object and execute the provided block with each
|
59
|
+
# candidate. A block is required.
|
60
|
+
def each
|
61
|
+
file_rec = next_candidate
|
62
|
+
until file_rec.nil?
|
63
|
+
yield file_rec
|
64
|
+
|
65
|
+
file_rec = next_candidate
|
66
|
+
end
|
67
|
+
end
|
68
|
+
|
69
|
+
private
|
70
|
+
def fetch_next_page
|
71
|
+
if @force
|
72
|
+
@result_set = @index_manager.registered_paths(@file_selector)
|
73
|
+
else
|
74
|
+
case @event
|
75
|
+
when EventNames::PRESERVE
|
76
|
+
@result_set = @index_manager.paths_with_stale_services(@file_selector, @stale_datetime)
|
77
|
+
when EventNames::CLEANUP
|
78
|
+
# TODO
|
79
|
+
end
|
80
|
+
end
|
81
|
+
logger.debug("Retrieve result set with #{@result_set&.length} entries")
|
82
|
+
end
|
83
|
+
end
|
84
|
+
end
|