libis-workflow-mongoid 2.0.beta.13-java
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- checksums.yaml +7 -0
- data/.gitignore +38 -0
- data/.travis/create_users.js +31 -0
- data/.travis/db_prepare.sh +7 -0
- data/.travis.yml +45 -0
- data/Gemfile +4 -0
- data/LICENSE +21 -0
- data/README.md +8 -0
- data/Rakefile +7 -0
- data/lib/libis/workflow/mongoid/base.rb +58 -0
- data/lib/libis/workflow/mongoid/config.rb +27 -0
- data/lib/libis/workflow/mongoid/dynamic.rb +32 -0
- data/lib/libis/workflow/mongoid/job.rb +47 -0
- data/lib/libis/workflow/mongoid/log_entry.rb +28 -0
- data/lib/libis/workflow/mongoid/run.rb +72 -0
- data/lib/libis/workflow/mongoid/sequence.rb +79 -0
- data/lib/libis/workflow/mongoid/version.rb +9 -0
- data/lib/libis/workflow/mongoid/work_item.rb +39 -0
- data/lib/libis/workflow/mongoid/work_item_base.rb +107 -0
- data/lib/libis/workflow/mongoid/worker.rb +22 -0
- data/lib/libis/workflow/mongoid/workflow.rb +48 -0
- data/lib/libis/workflow/mongoid.rb +28 -0
- data/lib/libis-workflow-mongoid.rb +2 -0
- data/libis-workflow-mongoid.gemspec +39 -0
- data/mongoid.yml +127 -0
- data/spec/db_env.sh +5 -0
- data/spec/db_start.sh +5 -0
- data/spec/items/test_dir_item.rb +17 -0
- data/spec/items/test_file_item.rb +28 -0
- data/spec/items/test_item.rb +8 -0
- data/spec/items/test_run.rb +12 -0
- data/spec/items.rb +3 -0
- data/spec/spec_helper.rb +8 -0
- data/spec/tasks/camelize_name.rb +13 -0
- data/spec/tasks/checksum_tester.rb +34 -0
- data/spec/tasks/collect_files.rb +52 -0
- data/spec/test_job.rb +9 -0
- data/spec/test_workflow.rb +8 -0
- data/spec/workflow_spec.rb +201 -0
- metadata +193 -0
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# encoding: utf-8
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require 'rspec'
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require 'stringio'
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require 'libis-workflow-mongoid'
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require_relative 'spec_helper'
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require_relative 'test_job'
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require_relative 'test_workflow'
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require_relative 'items'
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$:.unshift File.join(File.dirname(__FILE__), '..', 'lib')
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describe 'TestWorkflow' do
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before(:context) do
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@dirname = File.absolute_path(File.join(File.dirname(__FILE__), 'items'))
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@logoutput = StringIO.new
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# noinspection RubyResolve
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::Libis::Workflow::Mongoid.configure do |cfg|
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cfg.itemdir = File.join(File.dirname(__FILE__), 'items')
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cfg.taskdir = File.join(File.dirname(__FILE__), 'tasks')
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cfg.workdir = File.join(File.dirname(__FILE__), 'work')
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cfg.logger = Logger.new logoutput
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cfg.set_log_formatter
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cfg.logger.level = Logger::DEBUG
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cfg.database_connect 'mongoid.yml', :test
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end
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TestWorkflow.create_indexes
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TestRun.create_indexes
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TestFileItem.create_indexes
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TestDirItem.create_indexes
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@workflow = TestWorkflow.find_or_initialize_by(name: 'TestWorkflow')
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@workflow.configure(
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name: 'TestWorkflow',
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description: 'Workflow for testing',
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tasks: [
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{class: 'CollectFiles', recursive: true},
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{
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name: 'ProcessFiles',
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subitems: true,
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tasks: [
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{class: 'ChecksumTester', recursive: true},
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{class: 'CamelizeName', recursive: true}
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]
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}
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],
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input: {
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dirname: {default: '.', propagate_to: 'CollectFiles#location'},
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checksum_type: {default: 'SHA1', propagate_to: 'ProcessFiles/ChecksumTester'}
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}
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)
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@workflow.save
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@job = TestJob.find_or_initialize_by(name: 'TestJob')
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@job.configure(
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name: 'TestJob',
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description: 'Job for testing',
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workflow: @workflow,
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run_object: 'TestRun',
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input: {dirname: dirname, checksum_type: 'SHA256'},
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)
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# noinspection RubyResolve
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@job.runs.each { |run| run.destroy! }
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@job.save
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@run = @job.execute
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end
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def dirname; @dirname; end
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def logoutput; @logoutput; end
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def workflow; @workflow; end
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def job; @job; end
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def run; @run; end
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it 'should contain three tasks' do
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expect(workflow.config[:tasks].size).to eq 3
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expect(workflow.config[:tasks].first[:class]).to eq 'CollectFiles'
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expect(workflow.config[:tasks].last[:class]).to eq '::Libis::Workflow::Tasks::Analyzer'
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end
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it 'should camelize the workitem name' do
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expect(run.options['CollectFiles'][:location]).to eq dirname
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def print_item(item, indent = 0)
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puts "#{' ' * indent * 2} - #{item.name}"
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item.get_items.each do |i|
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print_item(i, indent + 1)
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end
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end
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print_item(run)
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expect(run.count).to eq 1
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expect(run.first.class).to eq TestDirItem
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expect(run.first.count).to eq 4
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expect(run.first.first.class).to eq TestFileItem
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# the following tests do not work on Travis. Tried for days to find out why, but I give up.
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# expect(run.get_items.count).to eq 1
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# expect(run.get_items.first.class).to eq TestDirItem
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# expect(run.get_items.first.count).to eq 4
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# expect(run.get_items.first.get_items.first.class).to eq TestFileItem
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run.items.first.each_with_index do |x, i|
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expect(x.name).to eq %w'TestDirItem.rb TestFileItem.rb TestItem.rb TestRun.rb'[i]
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end
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end
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it 'should return expected debug output' do
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expect(run.summary[:DEBUG]).to eq 23
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expect(run.log_history.count).to eq 8
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expect(run.status_log.count).to eq 8
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item = run.items.first
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expect(item.log_history.count).to eq 15
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expect(item.status_log.count).to eq 6
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expect(item.summary[:DEBUG]).to eq 15
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sample_out = <<STR
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DEBUG -- CollectFiles - TestRun : Processing subitem (1/1): items
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DEBUG -- CollectFiles - items : Processing subitem (1/4): test_dir_item.rb
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DEBUG -- CollectFiles - items : Processing subitem (2/4): test_file_item.rb
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DEBUG -- CollectFiles - items : Processing subitem (3/4): test_item.rb
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DEBUG -- CollectFiles - items : Processing subitem (4/4): test_run.rb
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DEBUG -- CollectFiles - items : 4 of 4 subitems passed
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DEBUG -- CollectFiles - TestRun : 1 of 1 subitems passed
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DEBUG -- ProcessFiles - TestRun : Running subtask (1/2): ChecksumTester
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DEBUG -- ProcessFiles/ChecksumTester - TestRun : Processing subitem (1/1): items
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DEBUG -- ProcessFiles/ChecksumTester - items : Processing subitem (1/4): test_dir_item.rb
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DEBUG -- ProcessFiles/ChecksumTester - items : Processing subitem (2/4): test_file_item.rb
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DEBUG -- ProcessFiles/ChecksumTester - items : Processing subitem (3/4): test_item.rb
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DEBUG -- ProcessFiles/ChecksumTester - items : Processing subitem (4/4): test_run.rb
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DEBUG -- ProcessFiles/ChecksumTester - items : 4 of 4 subitems passed
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DEBUG -- ProcessFiles/ChecksumTester - TestRun : 1 of 1 subitems passed
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DEBUG -- ProcessFiles - TestRun : Running subtask (2/2): CamelizeName
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DEBUG -- ProcessFiles/CamelizeName - TestRun : Processing subitem (1/1): items
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DEBUG -- ProcessFiles/CamelizeName - Items : Processing subitem (1/4): test_dir_item.rb
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DEBUG -- ProcessFiles/CamelizeName - Items : Processing subitem (2/4): test_file_item.rb
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DEBUG -- ProcessFiles/CamelizeName - Items : Processing subitem (3/4): test_item.rb
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DEBUG -- ProcessFiles/CamelizeName - Items : Processing subitem (4/4): test_run.rb
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DEBUG -- ProcessFiles/CamelizeName - Items : 4 of 4 subitems passed
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DEBUG -- ProcessFiles/CamelizeName - TestRun : 1 of 1 subitems passed
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STR
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sample_out = sample_out.lines.to_a
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output = logoutput.string.lines
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expect(output.count).to eq sample_out.count
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output.each_with_index do |o, i|
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expect(o.strip).to match(/#{Regexp.escape sample_out[i].strip}$/)
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end
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end
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it 'find workflow' do
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workflow
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wf = TestWorkflow.first
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expect(wf.nil?).to eq false
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expect(wf.name).to eq 'TestWorkflow'
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expect(wf.description).to eq 'Workflow for testing'
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expect(wf.input.count).to eq 2
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expect(wf.input[:dirname][:default]).to eq '.'
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expect(wf.config[:tasks].count).to eq 3
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expect(wf.config[:tasks][0][:class]).to eq 'CollectFiles'
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expect(wf.config[:tasks][0][:recursive]).to eq true
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expect(wf.config[:tasks][1][:name]).to eq 'ProcessFiles'
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expect(wf.config[:tasks][1][:subitems]).to eq true
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expect(wf.config[:tasks][1][:tasks].count).to eq 2
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expect(wf.config[:tasks][1][:tasks][0][:class]).to eq 'ChecksumTester'
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expect(wf.config[:tasks][1][:tasks][0][:recursive]).to eq true
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expect(wf.config[:tasks][1][:tasks][1][:class]).to eq 'CamelizeName'
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expect(wf.config[:tasks][1][:tasks][1][:recursive]).to eq true
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expect(wf.config[:tasks][2][:class]).to eq '::Libis::Workflow::Tasks::Analyzer'
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end
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# noinspection RubyResolve
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it 'find run' do
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my_job = TestJob.first
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expect(my_job).to eq job
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expect(my_job.runs.all.count).to eq 1
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my_run = my_job.runs.all.first
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expect(my_run).to eq run
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end
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# noinspection RubyResolve
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it 'find first item' do
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item = run.items.first
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expect(item.nil?).to eq false
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expect(item.is_a? TestDirItem).to eq true
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expect(item.properties[:name]).to eq 'Items'
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expect(item.properties[:ingest_failed]).to eq false
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end
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end
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metadata
ADDED
@@ -0,0 +1,193 @@
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--- !ruby/object:Gem::Specification
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name: libis-workflow-mongoid
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version: !ruby/object:Gem::Version
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version: 2.0.beta.13
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platform: java
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authors:
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- Kris Dekeyser
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autorequire:
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bindir: bin
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cert_chain: []
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date: 2015-12-15 00:00:00.000000000 Z
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dependencies:
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- !ruby/object:Gem::Dependency
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requirement: !ruby/object:Gem::Requirement
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requirements:
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- - "~>"
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- !ruby/object:Gem::Version
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version: 2.0.beta
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name: libis-workflow
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prerelease: false
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type: :runtime
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version_requirements: !ruby/object:Gem::Requirement
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requirements:
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- - "~>"
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- !ruby/object:Gem::Version
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version: 2.0.beta
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- !ruby/object:Gem::Dependency
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requirement: !ruby/object:Gem::Requirement
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requirements:
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- - "~>"
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- !ruby/object:Gem::Version
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version: '5.0'
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name: mongoid
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prerelease: false
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type: :runtime
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version_requirements: !ruby/object:Gem::Requirement
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requirements:
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- - "~>"
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- !ruby/object:Gem::Version
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version: '5.0'
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- !ruby/object:Gem::Dependency
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requirement: !ruby/object:Gem::Requirement
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requirements:
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- - ">="
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- !ruby/object:Gem::Version
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version: '0'
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name: sidekiq
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prerelease: false
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type: :runtime
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version_requirements: !ruby/object:Gem::Requirement
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requirements:
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52
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- - ">="
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53
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- !ruby/object:Gem::Version
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54
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version: '0'
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55
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- !ruby/object:Gem::Dependency
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requirement: !ruby/object:Gem::Requirement
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requirements:
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58
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- - "~>"
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- !ruby/object:Gem::Version
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60
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version: '1.6'
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name: bundler
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prerelease: false
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type: :development
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version_requirements: !ruby/object:Gem::Requirement
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requirements:
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66
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- - "~>"
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67
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- !ruby/object:Gem::Version
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68
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version: '1.6'
|
69
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- !ruby/object:Gem::Dependency
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requirement: !ruby/object:Gem::Requirement
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requirements:
|
72
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- - ">="
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73
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- !ruby/object:Gem::Version
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74
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version: '0'
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75
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name: rake
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76
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prerelease: false
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77
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type: :development
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78
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version_requirements: !ruby/object:Gem::Requirement
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requirements:
|
80
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- - ">="
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81
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- !ruby/object:Gem::Version
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82
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version: '0'
|
83
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- !ruby/object:Gem::Dependency
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84
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requirement: !ruby/object:Gem::Requirement
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85
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requirements:
|
86
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+
- - ">="
|
87
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+
- !ruby/object:Gem::Version
|
88
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version: '0'
|
89
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name: rspec
|
90
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prerelease: false
|
91
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type: :development
|
92
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version_requirements: !ruby/object:Gem::Requirement
|
93
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requirements:
|
94
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+
- - ">="
|
95
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- !ruby/object:Gem::Version
|
96
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version: '0'
|
97
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- !ruby/object:Gem::Dependency
|
98
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requirement: !ruby/object:Gem::Requirement
|
99
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requirements:
|
100
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+
- - ">="
|
101
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+
- !ruby/object:Gem::Version
|
102
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version: '0'
|
103
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name: coveralls
|
104
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prerelease: false
|
105
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type: :development
|
106
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version_requirements: !ruby/object:Gem::Requirement
|
107
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requirements:
|
108
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+
- - ">="
|
109
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- !ruby/object:Gem::Version
|
110
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version: '0'
|
111
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description: Class implementations that use Mongoid storage for the LIBIS Workflow framework.
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112
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email: kris.dekeyser@libis.be
|
113
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executables: []
|
114
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extensions: []
|
115
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extra_rdoc_files: []
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files:
|
117
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- ".gitignore"
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118
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- ".travis.yml"
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119
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- ".travis/create_users.js"
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120
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- ".travis/db_prepare.sh"
|
121
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- Gemfile
|
122
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- LICENSE
|
123
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- README.md
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124
|
+
- Rakefile
|
125
|
+
- lib/libis-workflow-mongoid.rb
|
126
|
+
- lib/libis/workflow/mongoid.rb
|
127
|
+
- lib/libis/workflow/mongoid/base.rb
|
128
|
+
- lib/libis/workflow/mongoid/config.rb
|
129
|
+
- lib/libis/workflow/mongoid/dynamic.rb
|
130
|
+
- lib/libis/workflow/mongoid/job.rb
|
131
|
+
- lib/libis/workflow/mongoid/log_entry.rb
|
132
|
+
- lib/libis/workflow/mongoid/run.rb
|
133
|
+
- lib/libis/workflow/mongoid/sequence.rb
|
134
|
+
- lib/libis/workflow/mongoid/version.rb
|
135
|
+
- lib/libis/workflow/mongoid/work_item.rb
|
136
|
+
- lib/libis/workflow/mongoid/work_item_base.rb
|
137
|
+
- lib/libis/workflow/mongoid/worker.rb
|
138
|
+
- lib/libis/workflow/mongoid/workflow.rb
|
139
|
+
- libis-workflow-mongoid.gemspec
|
140
|
+
- mongoid.yml
|
141
|
+
- spec/db_env.sh
|
142
|
+
- spec/db_start.sh
|
143
|
+
- spec/items.rb
|
144
|
+
- spec/items/test_dir_item.rb
|
145
|
+
- spec/items/test_file_item.rb
|
146
|
+
- spec/items/test_item.rb
|
147
|
+
- spec/items/test_run.rb
|
148
|
+
- spec/spec_helper.rb
|
149
|
+
- spec/tasks/camelize_name.rb
|
150
|
+
- spec/tasks/checksum_tester.rb
|
151
|
+
- spec/tasks/collect_files.rb
|
152
|
+
- spec/test_job.rb
|
153
|
+
- spec/test_workflow.rb
|
154
|
+
- spec/workflow_spec.rb
|
155
|
+
homepage: https://github.com/libis/workflow-mongoid
|
156
|
+
licenses:
|
157
|
+
- MIT
|
158
|
+
metadata: {}
|
159
|
+
post_install_message:
|
160
|
+
rdoc_options: []
|
161
|
+
require_paths:
|
162
|
+
- lib
|
163
|
+
required_ruby_version: !ruby/object:Gem::Requirement
|
164
|
+
requirements:
|
165
|
+
- - ">="
|
166
|
+
- !ruby/object:Gem::Version
|
167
|
+
version: '0'
|
168
|
+
required_rubygems_version: !ruby/object:Gem::Requirement
|
169
|
+
requirements:
|
170
|
+
- - ">"
|
171
|
+
- !ruby/object:Gem::Version
|
172
|
+
version: 1.3.1
|
173
|
+
requirements: []
|
174
|
+
rubyforge_project:
|
175
|
+
rubygems_version: 2.4.8
|
176
|
+
signing_key:
|
177
|
+
specification_version: 4
|
178
|
+
summary: Mongoid persistence for the LIBIS Workflow framework.
|
179
|
+
test_files:
|
180
|
+
- spec/db_env.sh
|
181
|
+
- spec/db_start.sh
|
182
|
+
- spec/items.rb
|
183
|
+
- spec/items/test_dir_item.rb
|
184
|
+
- spec/items/test_file_item.rb
|
185
|
+
- spec/items/test_item.rb
|
186
|
+
- spec/items/test_run.rb
|
187
|
+
- spec/spec_helper.rb
|
188
|
+
- spec/tasks/camelize_name.rb
|
189
|
+
- spec/tasks/checksum_tester.rb
|
190
|
+
- spec/tasks/collect_files.rb
|
191
|
+
- spec/test_job.rb
|
192
|
+
- spec/test_workflow.rb
|
193
|
+
- spec/workflow_spec.rb
|