lazar 0.0.9 → 0.9.0
Sign up to get free protection for your applications and to get access to all the features.
- checksums.yaml +4 -4
- data/VERSION +1 -1
- data/ext/lazar/rinstall.R +6 -7
- data/lazar.gemspec +6 -6
- data/test/setup.rb +2 -1
- metadata +10 -4
checksums.yaml
CHANGED
|
@@ -1,7 +1,7 @@
|
|
|
1
1
|
---
|
|
2
2
|
SHA1:
|
|
3
|
-
metadata.gz:
|
|
4
|
-
data.tar.gz:
|
|
3
|
+
metadata.gz: f021f49e6fe71eb4508bd9a67a3bdd8b68da1aee
|
|
4
|
+
data.tar.gz: f3ebc83eca176609b0a6fa7a7510e2f8272b7c75
|
|
5
5
|
SHA512:
|
|
6
|
-
metadata.gz:
|
|
7
|
-
data.tar.gz:
|
|
6
|
+
metadata.gz: c47af3ed313e407210e3c2f2272f3f5467501bf07da1c9ada482671ee9243dfb9ab01a6b708af70ef8d24fb3ef0c214a070e0a61f70230262f5f31ca89266c33
|
|
7
|
+
data.tar.gz: 16a1328b23cbe95097d970c93ad52445ad3fadfbc9026660753bd6e0d1038992b6f7445595569bb22523503ae1ee0912633a6401a02e85a393adfc6a56fa6019
|
data/VERSION
CHANGED
|
@@ -1 +1 @@
|
|
|
1
|
-
0.0
|
|
1
|
+
0.9.0
|
data/ext/lazar/rinstall.R
CHANGED
|
@@ -1,9 +1,8 @@
|
|
|
1
1
|
libdir = commandArgs(trailingOnly=TRUE)[1]
|
|
2
|
-
# chooseCRANmirror(ind=19); does not have any impact on selected server
|
|
3
|
-
#args=paste0("--prefix=",libdir,"/..")
|
|
4
2
|
#install.packages("Rserve",lib=libdir,configure.args=args)
|
|
5
|
-
|
|
6
|
-
install.packages("
|
|
7
|
-
install.packages("
|
|
8
|
-
install.packages("
|
|
9
|
-
install.packages("
|
|
3
|
+
repo = "https://stat.ethz.ch/CRAN/"
|
|
4
|
+
install.packages("gridExtra",lib=libdir,repos=repo);
|
|
5
|
+
install.packages("ggplot2",lib=libdir,repos=repo);
|
|
6
|
+
install.packages("pls",lib=libdir,repos=repo);
|
|
7
|
+
install.packages("caret",lib=libdir,repos=repo);
|
|
8
|
+
install.packages("doMC",lib=libdir,repos=repo);
|
data/lazar.gemspec
CHANGED
|
@@ -18,11 +18,11 @@ Gem::Specification.new do |s|
|
|
|
18
18
|
s.require_paths = ["lib"]
|
|
19
19
|
|
|
20
20
|
# specify any dependencies here; for example:
|
|
21
|
-
s.add_runtime_dependency
|
|
22
|
-
s.add_runtime_dependency
|
|
23
|
-
s.add_runtime_dependency 'nokogiri',
|
|
24
|
-
s.add_runtime_dependency 'rserve-client',
|
|
25
|
-
s.add_runtime_dependency
|
|
26
|
-
s.add_runtime_dependency 'openbabel
|
|
21
|
+
s.add_runtime_dependency 'bundler', '~> 1.11'
|
|
22
|
+
s.add_runtime_dependency 'rest-client', '~> 1.8'
|
|
23
|
+
s.add_runtime_dependency 'nokogiri', '~> 1.6'
|
|
24
|
+
s.add_runtime_dependency 'rserve-client', '~> 0.3'
|
|
25
|
+
s.add_runtime_dependency 'mongoid', '~> 5.0'
|
|
26
|
+
s.add_runtime_dependency 'openbabel', '~> 2.3', '>= 2.3.2.2'
|
|
27
27
|
|
|
28
28
|
end
|
data/test/setup.rb
CHANGED
|
@@ -1,6 +1,7 @@
|
|
|
1
1
|
ENV["LAZAR_ENV"] = "development"
|
|
2
2
|
require 'minitest/autorun'
|
|
3
|
-
require_relative '../lib/lazar.rb'
|
|
3
|
+
#require_relative '../lib/lazar.rb'
|
|
4
|
+
require 'lazar'
|
|
4
5
|
include OpenTox
|
|
5
6
|
TEST_DIR ||= File.expand_path(File.dirname(__FILE__))
|
|
6
7
|
DATA_DIR ||= File.join(TEST_DIR,"data")
|
metadata
CHANGED
|
@@ -1,7 +1,7 @@
|
|
|
1
1
|
--- !ruby/object:Gem::Specification
|
|
2
2
|
name: lazar
|
|
3
3
|
version: !ruby/object:Gem::Version
|
|
4
|
-
version: 0.0
|
|
4
|
+
version: 0.9.0
|
|
5
5
|
platform: ruby
|
|
6
6
|
authors:
|
|
7
7
|
- Christoph Helma, Martin Guetlein, Andreas Maunz, Micha Rautenberg, David Vorgrimmler,
|
|
@@ -82,19 +82,25 @@ dependencies:
|
|
|
82
82
|
- !ruby/object:Gem::Version
|
|
83
83
|
version: '5.0'
|
|
84
84
|
- !ruby/object:Gem::Dependency
|
|
85
|
-
name: openbabel
|
|
85
|
+
name: openbabel
|
|
86
86
|
requirement: !ruby/object:Gem::Requirement
|
|
87
87
|
requirements:
|
|
88
88
|
- - "~>"
|
|
89
89
|
- !ruby/object:Gem::Version
|
|
90
|
-
version: '
|
|
90
|
+
version: '2.3'
|
|
91
|
+
- - ">="
|
|
92
|
+
- !ruby/object:Gem::Version
|
|
93
|
+
version: 2.3.2.2
|
|
91
94
|
type: :runtime
|
|
92
95
|
prerelease: false
|
|
93
96
|
version_requirements: !ruby/object:Gem::Requirement
|
|
94
97
|
requirements:
|
|
95
98
|
- - "~>"
|
|
96
99
|
- !ruby/object:Gem::Version
|
|
97
|
-
version: '
|
|
100
|
+
version: '2.3'
|
|
101
|
+
- - ">="
|
|
102
|
+
- !ruby/object:Gem::Version
|
|
103
|
+
version: 2.3.2.2
|
|
98
104
|
description: Libraries for lazy structure-activity relationships and read-across.
|
|
99
105
|
email:
|
|
100
106
|
- helma@in-silico.ch
|