labimotion 1.5.0.rc8 → 1.5.0.rc9
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- checksums.yaml +4 -4
- data/lib/labimotion/libs/data/vocab/Standard.json +364 -25
- data/lib/labimotion/version.rb +1 -1
- metadata +1 -1
checksums.yaml
CHANGED
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---
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SHA256:
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metadata.gz:
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data.tar.gz:
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metadata.gz: 34535582f9432712614a74a72a54c4793037627d1b02c1a895233e7bb5fb2b85
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data.tar.gz: 7e3e49f67bbb0bdde267f20a9bb214b53906b5154cad98e3985fb2901e9b7489
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SHA512:
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metadata.gz:
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data.tar.gz:
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metadata.gz: 31ac83a6073918c38bfd36dfa8222706282d92ec90c9f4006740c72ef43aa25f5eeead581f72976927ca0ba30028d7c79bbdbb3369137b3cfaaa8980116b526c
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7
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+
data.tar.gz: 4fc728cf883e6d9a3f4fcf54193ab823993e424c2bf6d53fa4d924cfb3efec4b5dfc65ab7a122e19b9ac16e7057f392e93bed88e0f302046f77533d498f89e7c
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@@ -1,12 +1,298 @@
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[
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{
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"identifier": "atmosphere",
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"name": "atmosphere",
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"label": "Atmosphere",
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"field_type": "text",
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"iri": "http://purl.obolibrary.org/obo/NCIT_C54711",
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"label": "Atmosphere",
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"Non-SI unit of pressure equal to 101 325 Pa."
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],
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"ontology_name": "ncit",
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"ontology_prefix": "NCIT",
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"type": "class"
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},
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"source": "Standard"
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},
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{
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"identifier": "calibration",
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"name": "calibration",
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"label": "Calibration",
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"field_type": "text",
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"ontology": {
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"id": "ncit:class:http://purl.obolibrary.org/obo/NCIT_C69187",
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"iri": "http://purl.obolibrary.org/obo/NCIT_C69187",
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"short_form": "NCIT_C69187",
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"obo_id": "NCIT:C69187",
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"label": "Calibration",
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"description": [
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"The act of checking or adjusting (by comparison with a standard) the accuracy of a measuring instrument."
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],
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"ontology_name": "ncit",
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"ontology_prefix": "NCIT",
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"type": "class"
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},
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"source": "Standard"
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},
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{
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"identifier": "coating",
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"name": "coating",
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"label": "Coating",
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"field_type": "text",
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"ontology": {
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"id": "afo:class:http://purl.allotrope.org/ontologies/process#AFP_0001986",
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"iri": "http://purl.allotrope.org/ontologies/process#AFP_0001986",
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"short_form": "AFP_0001986",
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"obo_id": "AFP:0001986",
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"label": "coating",
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"description": [
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"The application of a thin cover to a material. [CHMO]"
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],
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"ontology_name": "afo",
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"ontology_prefix": "AFO",
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"type": "class"
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},
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"source": "Standard"
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},
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{
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"identifier": "coating_material",
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"name": "coating_material",
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"label": "Coating Material",
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"field_type": "text",
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"ontology": {
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"id": "ncit:class:http://purl.obolibrary.org/obo/NCIT_C172794",
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"iri": "http://purl.obolibrary.org/obo/NCIT_C172794",
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"short_form": "NCIT_C172794",
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"obo_id": "NCIT:C172794",
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"label": "Coating Material",
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"description": [
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"A layer of material covering the surface of a device."
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],
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"ontology_name": "ncit",
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"ontology_prefix": "NCIT",
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"type": "class"
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},
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"source": "Standard"
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},
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{
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"identifier": "wavelength",
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"name": "wavelength",
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"label": "Wavelength",
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"field_type": "text",
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"ontology": {
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"id": "ncit:class:http://purl.obolibrary.org/obo/NCIT_C48158",
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"iri": "http://purl.obolibrary.org/obo/NCIT_C48158",
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"short_form": "NCIT_C48158",
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"obo_id": "NCIT:C48158",
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"label": "Wavelength",
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"description": [
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"The distance (measured in the direction of propagation) between two points in the same phase in consecutive cycles of a wave."
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],
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"ontology_name": "ncit",
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"ontology_prefix": "NCIT",
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"type": "class"
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},
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"source": "Standard"
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},
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{
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"identifier": "std-sample_size",
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"name": "sample_size",
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"label": "Sample Size",
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"field_type": "text",
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"ontology": {
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"id": "ncit:class:http://purl.obolibrary.org/obo/NCIT_C53190",
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"iri": "http://purl.obolibrary.org/obo/NCIT_C53190",
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"short_form": "NCIT_C53190",
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"obo_id": "NCIT:C53190",
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"label": "Sample Size",
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"ontology_name": "ncit",
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"ontology_prefix": "NCIT",
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"type": "class"
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},
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"source": "Standard"
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},
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{
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"identifier": "std-instrument",
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"name": "instrument",
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"label": "Instrument",
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"field_type": "text",
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"ontology": {
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"id": "nmrcv:class:http://nmrML.org/nmrCV#NMR:1000463",
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"iri": "http://nmrML.org/nmrCV#NMR:1000463",
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"short_form": "NMR:1000463",
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"label": "instrument",
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"description": [
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"Description of the instrument or the mass spectrometer."
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],
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"ontology_name": "nmrcv",
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"ontology_prefix": "NMRCV",
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"type": "class"
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},
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"source": "Standard"
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},
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{
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"identifier": "std-irr_freq",
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"name": "irr_freq",
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"label": "Irradiation frequency",
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"field_type": "text",
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"ontology": {
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"id": "nmrcv:class:http://nmrML.org/nmrCV#NMR:1000463",
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"iri": "http://nmrML.org/nmrCV#NMR:1000463",
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"short_form": "NMR:1000463",
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"label": "instrument",
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"description": [
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"Description of the instrument or the mass spectrometer."
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],
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"ontology_name": "nmrcv",
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"ontology_prefix": "NMRCV",
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"type": "class"
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},
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"source": "Standard"
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},
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{
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"identifier": "std-num_scans",
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"name": "num_scans",
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"label": "Number of scans",
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"field_type": "text",
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"ontology": {
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"id": "nmrcv:class:http://nmrML.org/nmrCV#NMR:1400087",
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"iri": "http://nmrML.org/nmrCV#NMR:1400087",
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"short_form": "NMR:1400087",
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"label": "number of scans",
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"description": [
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"def: The number of repeat scans performed and summed to create the data set for an NMR sample."
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],
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"ontology_name": "nmrcv",
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"ontology_prefix": "NMRCV",
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"type": "class"
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},
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"source": "Standard"
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},
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{
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"identifier": "std-sample_ph",
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"name": "sample_ph",
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"label": "Sample pH",
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"field_type": "text",
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"ontology": {
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"id": "nmrcv:class:http://nmrML.org/nmrCV#NMR:1000019",
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"iri": "http://nmrML.org/nmrCV#NMR:1000019",
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"short_form": "NMR:1000019",
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"label": "sample pH",
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"ontology_name": "nmrcv",
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"ontology_prefix": "NMRCV",
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"type": "class"
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},
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"source": "Standard"
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},
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{
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"identifier": "std-pulse_seq",
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"name": "pulse_seq",
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"label": "NMR pulse sequence",
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"field_type": "text",
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"ontology": {
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"id": "nmrcv:class:http://nmrML.org/nmrCV#NMR:1400037",
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"iri": "http://nmrML.org/nmrCV#NMR:1400037",
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"short_form": "NMR:1400037",
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"label": "NMR pulse sequence",
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"description": [
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"def: A sequence of excitation pulses.",
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"http://www.bmrb.wisc.edu/tools/choose_pulse_info.php"
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],
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"ontology_name": "nmrcv",
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"ontology_prefix": "NMRCV",
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"type": "class"
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},
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"source": "Standard"
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},
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{
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"identifier": "std-sample_conc",
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"name": "sample_conc",
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"label": "sample concentration",
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"field_type": "text",
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"ontology": {
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"id": "nmrcv:class:http://nmrML.org/nmrCV#NMR:1000006",
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"iri": "http://nmrML.org/nmrCV#NMR:1000006",
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"short_form": "NMR:1000006",
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"label": "sample concentration",
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"description": [
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"Concentration of sample in picomol/ul, femtomol/ul or attomol/ul solution used."
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],
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"ontology_name": "nmrcv",
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"ontology_prefix": "NMRCV",
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"type": "class"
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},
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"source": "Standard"
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},
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{
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"identifier": "std-scan_range",
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"name": "scan_range",
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"label": "scan range",
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"field_type": "text",
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"ontology": {
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"id": "afo:class:http://purl.allotrope.org/ontologies/result#AFR_0001957",
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"iri": "http://purl.allotrope.org/ontologies/result#AFR_0001957",
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"short_form": "AFR_0001957",
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"obo_id": "AFR:0001957",
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241
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"label": "detector scan rate setting",
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242
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"description": [
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243
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"A detector setting that sets the frequency of scans per time unit. [Allotrope]"
|
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],
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245
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"ontology_name": "afo",
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"ontology_prefix": "AFO",
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"type": "class"
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},
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"source": "Standard"
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},
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251
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{
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252
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"identifier": "std-software_name",
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"name": "software_name",
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"label": "Software Name",
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255
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"field_type": "text",
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256
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"ontology": {
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257
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"id": "ncit:class:http://purl.obolibrary.org/obo/NCIT_C150832",
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258
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"iri": "http://purl.obolibrary.org/obo/NCIT_C150832",
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259
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"short_form": "NCIT_C150832",
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260
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"obo_id": "NCIT:C150832",
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261
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"label": "Software Name",
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"description": [
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263
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"The literal identifier of the software program."
|
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],
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"ontology_name": "ncit",
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"ontology_prefix": "NCIT",
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"type": "class"
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},
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"source": "Standard"
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},
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{
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"identifier": "std-software_ver",
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"name": "software_ver",
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"label": "Software Version",
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"field_type": "text",
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"ontology": {
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"id": "ncit:class:http://purl.obolibrary.org/obo/NCIT_C111093",
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"iri": "http://purl.obolibrary.org/obo/NCIT_C111093",
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"short_form": "NCIT_C111093",
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"obo_id": "NCIT:C111093",
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281
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"label": "Software Version",
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"description": [
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283
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"A form or variant of software; one of a sequence of copies of a software program, each incorporating new modifications."
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],
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"ontology_name": "ncit",
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"ontology_prefix": "NCIT",
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"type": "class"
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},
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"source": "Standard"
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},
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|
+
{
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+
"identifier": "std-solvent",
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293
|
+
"name": "nmr_solvent",
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6
294
|
"label": "NMR Solvent",
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7
295
|
"field_type": "text",
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|
-
"opid": 0,
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9
|
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"term_id": "NMR:1000330",
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|
"ontology": {
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11
297
|
"id": "nmrcv:class:http://nmrML.org/nmrCV#NMR:1000330",
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298
|
"iri": "http://nmrML.org/nmrCV#NMR:1000330",
|
|
@@ -22,25 +308,78 @@
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22
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|
"source": "Standard"
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309
|
},
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310
|
{
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|
-
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|
311
|
+
"identifier": "std-sample_volume",
|
|
312
|
+
"name": "sample_volume",
|
|
313
|
+
"label": "sample volume",
|
|
314
|
+
"field_type": "text",
|
|
315
|
+
"ontology": {
|
|
316
|
+
"id": "nmrcv:class:http://nmrML.org/nmrCV#NMR:1000005",
|
|
317
|
+
"iri": "http://nmrML.org/nmrCV#NMR:1000005",
|
|
318
|
+
"short_form": "NMR:1000005",
|
|
319
|
+
"label": "sample volume",
|
|
320
|
+
"description": [
|
|
321
|
+
"Total volume of solution used."
|
|
322
|
+
],
|
|
323
|
+
"ontology_name": "nmrcv",
|
|
324
|
+
"ontology_prefix": "NMRCV",
|
|
325
|
+
"type": "class"
|
|
326
|
+
},
|
|
327
|
+
"source": "Standard"
|
|
328
|
+
},
|
|
329
|
+
{
|
|
330
|
+
"identifier": "std-solvent_info",
|
|
331
|
+
"name": "solvent_info",
|
|
332
|
+
"label": "NMR solvent information",
|
|
333
|
+
"field_type": "text",
|
|
334
|
+
"ontology": {
|
|
335
|
+
"id": "nmrcv:class:http://nmrML.org/nmrCV#NMR:1002010",
|
|
336
|
+
"iri": "http://nmrML.org/nmrCV#NMR:1002010",
|
|
337
|
+
"short_form": "NMR:1002010",
|
|
338
|
+
"label": "NMR solvent information",
|
|
339
|
+
"ontology_name": "nmrcv",
|
|
340
|
+
"ontology_prefix": "NMRCV",
|
|
341
|
+
"type": "class"
|
|
342
|
+
},
|
|
343
|
+
"source": "Standard"
|
|
344
|
+
},
|
|
345
|
+
{
|
|
346
|
+
"identifier": "std-sample_tube",
|
|
347
|
+
"name": "sample_tube",
|
|
348
|
+
"label": "NMR sample tube",
|
|
349
|
+
"field_type": "text",
|
|
350
|
+
"ontology": {
|
|
351
|
+
"id": "nmrcv:class:http://nmrML.org/nmrCV#NMR:1400132",
|
|
352
|
+
"iri": "http://nmrML.org/nmrCV#NMR:1400132",
|
|
353
|
+
"short_form": "NMR:1400132",
|
|
354
|
+
"label": "NMR sample tube",
|
|
355
|
+
"description": [
|
|
356
|
+
"http://en.wikipedia.org/wiki/NMR_tube",
|
|
357
|
+
"sortal dimensions are Vendor, Size (Diameter, length), Material (glass, quarz, pyrex ...), Frequency, Concentricity, OD and ID",
|
|
358
|
+
"The sample-tube holds the NMR sample and sits in the NMR probe. It is usually a glass tube of 5-20mm diameter."
|
|
359
|
+
],
|
|
360
|
+
"ontology_name": "nmrcv",
|
|
361
|
+
"ontology_prefix": "NMRCV",
|
|
362
|
+
"type": "class"
|
|
363
|
+
},
|
|
364
|
+
"source": "Standard"
|
|
365
|
+
},
|
|
366
|
+
{
|
|
367
|
+
"identifier": "temperature",
|
|
368
|
+
"name": "Temperature",
|
|
369
|
+
"label": "Temperature",
|
|
370
|
+
"field_type": "text",
|
|
371
|
+
"ontology": {
|
|
372
|
+
"id": "nmrcv:class:http://nmrML.org/nmrCV#NMR:1400025",
|
|
373
|
+
"iri": "http://nmrML.org/nmrCV#NMR:1400025",
|
|
374
|
+
"short_form": "NMR:1400025",
|
|
375
|
+
"label": "sample temperature in magnet",
|
|
376
|
+
"description": [
|
|
377
|
+
"def: The temperature of an NMR sample whilst in the magnet of an NMR instrument."
|
|
378
|
+
],
|
|
379
|
+
"ontology_name": "nmrcv",
|
|
380
|
+
"ontology_prefix": "NMRCV",
|
|
381
|
+
"type": "class"
|
|
382
|
+
},
|
|
383
|
+
"source": "Standard"
|
|
45
384
|
}
|
|
46
385
|
]
|
data/lib/labimotion/version.rb
CHANGED