labimotion 1.1.4 → 1.2.0.1
Sign up to get free protection for your applications and to get access to all the features.
- checksums.yaml +4 -4
- data/lib/labimotion/apis/generic_element_api.rb +32 -38
- data/lib/labimotion/collection/export.rb +45 -84
- data/lib/labimotion/collection/import.rb +60 -54
- data/lib/labimotion/entities/element_revision_entity.rb +10 -10
- data/lib/labimotion/entities/eln_element_entity.rb +23 -23
- data/lib/labimotion/entities/properties_entity.rb +18 -19
- data/lib/labimotion/entities/segment_revision_entity.rb +11 -11
- data/lib/labimotion/helpers/element_helpers.rb +14 -4
- data/lib/labimotion/helpers/generic_helpers.rb +9 -9
- data/lib/labimotion/helpers/segment_helpers.rb +1 -2
- data/lib/labimotion/libs/converter.rb +12 -12
- data/lib/labimotion/libs/export_dataset.rb +32 -6
- data/lib/labimotion/libs/nmr_mapper.rb +27 -27
- data/lib/labimotion/libs/properties_handler.rb +95 -0
- data/lib/labimotion/libs/sample_association.rb +15 -15
- data/lib/labimotion/models/concerns/generic_klass_revisions.rb +1 -1
- data/lib/labimotion/models/concerns/generic_revisions.rb +3 -3
- data/lib/labimotion/models/concerns/linked_properties.rb +18 -0
- data/lib/labimotion/models/concerns/segmentable.rb +17 -12
- data/lib/labimotion/models/element.rb +26 -17
- data/lib/labimotion/utils/export_utils.rb +196 -0
- data/lib/labimotion/utils/field_type.rb +23 -0
- data/lib/labimotion/utils/import_utils.rb +250 -59
- data/lib/labimotion/utils/prop.rb +27 -0
- data/lib/labimotion/utils/search.rb +2 -2
- data/lib/labimotion/utils/serializer.rb +22 -22
- data/lib/labimotion/version.rb +1 -1
- data/lib/labimotion.rb +4 -1
- metadata +7 -2
@@ -0,0 +1,95 @@
|
|
1
|
+
# frozen_string_literal: true
|
2
|
+
|
3
|
+
module Labimotion
|
4
|
+
class PropertiesHandler
|
5
|
+
class << self
|
6
|
+
private
|
7
|
+
|
8
|
+
def check_val(field, type)
|
9
|
+
case type
|
10
|
+
when Labimotion::FieldType::DRAG_SAMPLE, Labimotion::FieldType::DRAG_ELEMENT
|
11
|
+
return field.dig('value', 'el_id').present?
|
12
|
+
when Labimotion::FieldType::UPLOAD
|
13
|
+
return field.dig('value', 'files')&.length&.positive?
|
14
|
+
when Labimotion::FieldType::TABLE
|
15
|
+
return field[Labimotion::Prop::SUBFIELDS]&.length&.positive? && field['sub_values']&.length&.positive?
|
16
|
+
end
|
17
|
+
false
|
18
|
+
rescue StandardError => e
|
19
|
+
Labimotion.log_exception(e)
|
20
|
+
false
|
21
|
+
end
|
22
|
+
|
23
|
+
def detach_val(properties, field, key, type)
|
24
|
+
case type
|
25
|
+
when Labimotion::FieldType::DRAG_SAMPLE, Labimotion::FieldType::DRAG_ELEMENT, Labimotion::FieldType::UPLOAD
|
26
|
+
idx = properties[Labimotion::Prop::LAYERS][key][Labimotion::Prop::FIELDS].index(field)
|
27
|
+
properties[Labimotion::Prop::LAYERS][key][Labimotion::Prop::FIELDS][idx]['value'] = {}
|
28
|
+
when Labimotion::FieldType::TABLE
|
29
|
+
return properties if check_table_val(field)
|
30
|
+
|
31
|
+
idx = properties[Labimotion::Prop::LAYERS][key][Labimotion::Prop::FIELDS].index(field)
|
32
|
+
properties[Labimotion::Prop::LAYERS][key][Labimotion::Prop::FIELDS][idx]['sub_values'] = []
|
33
|
+
end
|
34
|
+
properties
|
35
|
+
rescue StandardError => e
|
36
|
+
Labimotion.log_exception(e)
|
37
|
+
properties
|
38
|
+
end
|
39
|
+
|
40
|
+
def check_table_val(field)
|
41
|
+
tsf_samples = field[Labimotion::Prop::SUBFIELDS].select { |ss| ss['type'] == Labimotion::FieldType::DRAG_SAMPLE }
|
42
|
+
tsf_elements = field[Labimotion::Prop::SUBFIELDS].select { |ss| ss['type'] == Labimotion::FieldType::DRAG_ELEMENT }
|
43
|
+
tsf_samples.length.zero? && tsf_elements.length.zero?
|
44
|
+
rescue StandardError => e
|
45
|
+
Labimotion.log_exception(e)
|
46
|
+
false
|
47
|
+
end
|
48
|
+
end
|
49
|
+
|
50
|
+
def self.check_properties(properties)
|
51
|
+
properties.nil? || !properties.is_a?(Hash) || properties[Labimotion::Prop::LAYERS].nil? || properties[Labimotion::Prop::LAYERS].keys.empty?
|
52
|
+
end
|
53
|
+
|
54
|
+
def self.detach(properties, key, type)
|
55
|
+
fields = properties[Labimotion::Prop::LAYERS][key][Labimotion::Prop::FIELDS].select { |ss| ss['type'] == type }
|
56
|
+
fields.each do |field|
|
57
|
+
next unless check_val(field, type)
|
58
|
+
|
59
|
+
properties = detach_val(properties, field, key, type)
|
60
|
+
end
|
61
|
+
properties
|
62
|
+
rescue StandardError => e
|
63
|
+
Labimotion.log_exception(e)
|
64
|
+
properties
|
65
|
+
end
|
66
|
+
|
67
|
+
def self.split(properties, key, type)
|
68
|
+
fields = properties[Labimotion::Prop::LAYERS][key][Labimotion::Prop::FIELDS].select { |ss| ss['type'] == type }
|
69
|
+
fields.each do |field|
|
70
|
+
next unless check_val(field, type)
|
71
|
+
|
72
|
+
idx = properties[Labimotion::Prop::LAYERS][key][Labimotion::Prop::FIELDS].index(field)
|
73
|
+
## TODO Split ...
|
74
|
+
end
|
75
|
+
properties
|
76
|
+
rescue StandardError => e
|
77
|
+
Labimotion.log_exception(e)
|
78
|
+
properties
|
79
|
+
end
|
80
|
+
|
81
|
+
def self.copy(properties, key, type)
|
82
|
+
fields = properties[Labimotion::Prop::LAYERS][key][Labimotion::Prop::FIELDS].select { |ss| ss['type'] == type }
|
83
|
+
fields.each do |field|
|
84
|
+
next unless check_val(field, type)
|
85
|
+
|
86
|
+
idx = properties[Labimotion::Prop::LAYERS][key][Labimotion::Prop::FIELDS].index(field)
|
87
|
+
## TODO Copy Sample...
|
88
|
+
end
|
89
|
+
properties
|
90
|
+
rescue StandardError => e
|
91
|
+
Labimotion.log_exception(e)
|
92
|
+
properties
|
93
|
+
end
|
94
|
+
end
|
95
|
+
end
|
@@ -34,9 +34,9 @@ module Labimotion
|
|
34
34
|
def self.build_table_sample(field_tables, current_user, element = nil)
|
35
35
|
sds = []
|
36
36
|
field_tables.each do |field|
|
37
|
-
next unless field['sub_values'].present? && field[
|
37
|
+
next unless field['sub_values'].present? && field[Labimotion::Prop::SUBFIELDS].present?
|
38
38
|
|
39
|
-
field_table_samples = field[
|
39
|
+
field_table_samples = field[Labimotion::Prop::SUBFIELDS].select { |ss| ss['type'] == Labimotion::FieldType::DRAG_SAMPLE }
|
40
40
|
next unless field_table_samples.present?
|
41
41
|
|
42
42
|
col_ids = field_table_samples.map { |x| x.values[0] }
|
@@ -73,33 +73,33 @@ module Labimotion
|
|
73
73
|
def self.update_sample_association(properties, current_user, element = nil)
|
74
74
|
sds = []
|
75
75
|
els = []
|
76
|
-
properties[
|
77
|
-
layer = properties[
|
78
|
-
field_samples = layer[
|
76
|
+
properties[Labimotion::Prop::LAYERS].keys.each do |key|
|
77
|
+
layer = properties[Labimotion::Prop::LAYERS][key]
|
78
|
+
field_samples = layer[Labimotion::Prop::FIELDS].select { |ss| ss['type'] == Labimotion::FieldType::DRAG_SAMPLE }
|
79
79
|
field_samples.each do |field|
|
80
|
-
idx = properties[
|
80
|
+
idx = properties[Labimotion::Prop::LAYERS][key][Labimotion::Prop::FIELDS].index(field)
|
81
81
|
sid = field.dig('value', 'el_id')
|
82
82
|
next if sid.blank?
|
83
83
|
|
84
|
-
sds << sid unless properties.dig(
|
85
|
-
next unless properties.dig(
|
84
|
+
sds << sid unless properties.dig(Labimotion::Prop::LAYERS, key, Labimotion::Prop::FIELDS, idx, 'value', 'is_new') == true
|
85
|
+
next unless properties.dig(Labimotion::Prop::LAYERS, key, Labimotion::Prop::FIELDS, idx, 'value', 'is_new') == true
|
86
86
|
|
87
87
|
cr_opt = field.dig('value', 'cr_opt')
|
88
88
|
subsample = Labimotion::SampleAssociation.build_sample(sid, element&.collections, current_user, cr_opt) unless sid.nil? || cr_opt.nil?
|
89
89
|
next if subsample.nil?
|
90
90
|
|
91
91
|
sds << subsample.id
|
92
|
-
properties[
|
93
|
-
properties[
|
94
|
-
properties[
|
95
|
-
properties[
|
92
|
+
properties[Labimotion::Prop::LAYERS][key][Labimotion::Prop::FIELDS][idx]['value']['el_id'] = subsample.id
|
93
|
+
properties[Labimotion::Prop::LAYERS][key][Labimotion::Prop::FIELDS][idx]['value']['el_label'] = subsample.short_label
|
94
|
+
properties[Labimotion::Prop::LAYERS][key][Labimotion::Prop::FIELDS][idx]['value']['el_tip'] = subsample.short_label
|
95
|
+
properties[Labimotion::Prop::LAYERS][key][Labimotion::Prop::FIELDS][idx]['value']['is_new'] = false
|
96
96
|
Labimotion::ElementsSample.find_or_create_by(element_id: element.id, sample_id: subsample.id) if element.present?
|
97
97
|
end
|
98
|
-
field_tables = properties[
|
98
|
+
field_tables = properties[Labimotion::Prop::LAYERS][key][Labimotion::Prop::FIELDS].select { |ss| ss['type'] == Labimotion::FieldType::TABLE }
|
99
99
|
sds << Labimotion::SampleAssociation.build_table_sample(field_tables, current_user, element) if element.present?
|
100
|
-
field_elements = layer[
|
100
|
+
field_elements = layer[Labimotion::Prop::FIELDS].select { |ss| ss['type'] == Labimotion::FieldType::DRAG_ELEMENT }
|
101
101
|
field_elements.each do |field|
|
102
|
-
idx = properties[
|
102
|
+
idx = properties[Labimotion::Prop::LAYERS][key][Labimotion::Prop::FIELDS].index(field)
|
103
103
|
sid = field.dig('value', 'el_id')
|
104
104
|
next if element.nil? || sid.blank? || sid == element.id
|
105
105
|
|
@@ -15,7 +15,7 @@ module Labimotion
|
|
15
15
|
if properties_release['flowObject'].present?
|
16
16
|
elements = (properties_release['flowObject']['nodes'] || []).map do |el|
|
17
17
|
if el['data'].present? && el['data']['lKey'].present?
|
18
|
-
layer = properties_release[
|
18
|
+
layer = properties_release[Labimotion::Prop::LAYERS][el['data']['lKey']]
|
19
19
|
el['data']['layer'] = layer if layer.present?
|
20
20
|
end
|
21
21
|
el
|
@@ -28,9 +28,9 @@ module Labimotion
|
|
28
28
|
|
29
29
|
def delete_attachments
|
30
30
|
att_ids = []
|
31
|
-
properties && properties[
|
32
|
-
layer = properties[
|
33
|
-
field_uploads = layer[
|
31
|
+
properties && properties[Labimotion::Prop::LAYERS]&.keys&.each do |key|
|
32
|
+
layer = properties[Labimotion::Prop::LAYERS][key]
|
33
|
+
field_uploads = layer[Labimotion::Prop::FIELDS].select { |ss| ss['type'] == Labimotion::FieldType::UPLOAD }
|
34
34
|
field_uploads.each do |field|
|
35
35
|
(field['value'] && field['value']['files'] || []).each do |file|
|
36
36
|
att_ids.push(file['aid']) unless file['aid'].nil?
|
@@ -0,0 +1,18 @@
|
|
1
|
+
module Labimotion
|
2
|
+
# Segmentable concern
|
3
|
+
module LinkedProperties
|
4
|
+
extend ActiveSupport::Concern
|
5
|
+
|
6
|
+
def detach_properties(properties)
|
7
|
+
return properties if Labimotion::PropertiesHandler.check_properties(properties)
|
8
|
+
|
9
|
+
properties[Labimotion::Prop::LAYERS]&.keys&.each do |key|
|
10
|
+
properties = Labimotion::PropertiesHandler.detach(properties, key, Labimotion::FieldType::DRAG_SAMPLE)
|
11
|
+
properties = Labimotion::PropertiesHandler.detach(properties, key, Labimotion::FieldType::DRAG_ELEMENT)
|
12
|
+
properties = Labimotion::PropertiesHandler.detach(properties, key, Labimotion::FieldType::UPLOAD)
|
13
|
+
properties = Labimotion::PropertiesHandler.detach(properties, key, Labimotion::FieldType::TABLE)
|
14
|
+
end
|
15
|
+
properties
|
16
|
+
end
|
17
|
+
end
|
18
|
+
end
|
@@ -16,21 +16,26 @@ module Labimotion
|
|
16
16
|
segments = save_segments(segments: args[:segments], current_user_id: args[:current_user_id])
|
17
17
|
segments.each do |segment|
|
18
18
|
properties = segment.properties
|
19
|
-
properties[
|
20
|
-
layer = properties[
|
21
|
-
field_uploads = layer[
|
19
|
+
properties[Labimotion::Prop::LAYERS].keys.each do |key|
|
20
|
+
layer = properties[Labimotion::Prop::LAYERS][key]
|
21
|
+
field_uploads = layer[Labimotion::Prop::FIELDS].select { |ss| ss['type'] == Labimotion::FieldType::UPLOAD }
|
22
22
|
field_uploads&.each do |upload|
|
23
|
-
idx = properties[
|
23
|
+
idx = properties[Labimotion::Prop::LAYERS][key][Labimotion::Prop::FIELDS].index(upload)
|
24
24
|
files = upload["value"] && upload["value"]["files"]
|
25
25
|
files&.each_with_index do |fi, fdx|
|
26
|
-
aid =
|
27
|
-
|
28
|
-
|
29
|
-
|
30
|
-
|
31
|
-
|
32
|
-
|
33
|
-
|
26
|
+
aid = files[fdx]['aid']
|
27
|
+
uid = files[fdx]['uid']
|
28
|
+
next if aid.nil?
|
29
|
+
|
30
|
+
att = Attachment.find_by(id: aid)
|
31
|
+
att = Attachment.find_by(identifier: uid) if att.nil?
|
32
|
+
copied_att = att&.copy(attachable_type: Labimotion::Prop::SEGMENTPROPS, attachable_id: segment.id, transferred: true)
|
33
|
+
if copied_att.nil?
|
34
|
+
properties[Labimotion::Prop::LAYERS][key][Labimotion::Prop::FIELDS][idx]['value']['files'].delete_at(fdx)
|
35
|
+
else
|
36
|
+
copied_att.save!
|
37
|
+
properties[Labimotion::Prop::LAYERS][key][Labimotion::Prop::FIELDS][idx]['value']['files'][fdx]['aid'] = copied_att.id
|
38
|
+
properties[Labimotion::Prop::LAYERS][key][Labimotion::Prop::FIELDS][idx]['value']['files'][fdx]['uid'] = copied_att.identifier
|
34
39
|
end
|
35
40
|
end
|
36
41
|
end
|
@@ -2,19 +2,20 @@
|
|
2
2
|
require 'labimotion/models/concerns/generic_revisions'
|
3
3
|
require 'labimotion/models/concerns/segmentable'
|
4
4
|
require 'labimotion/models/concerns/workflow'
|
5
|
+
require 'labimotion/models/concerns/linked_properties'
|
5
6
|
|
6
7
|
module Labimotion
|
7
8
|
class Element < ApplicationRecord
|
8
9
|
acts_as_paranoid
|
9
10
|
self.table_name = :elements
|
10
|
-
include PgSearch
|
11
|
-
include PgSearch::Model if Labimotion::IS_RAILS5 == false
|
11
|
+
include PgSearch::Model
|
12
12
|
include ElementUIStateScopes
|
13
13
|
include Collectable
|
14
14
|
include Taggable
|
15
15
|
include Workflow
|
16
16
|
include Segmentable
|
17
17
|
include GenericRevisions
|
18
|
+
include LinkedProperties
|
18
19
|
|
19
20
|
multisearchable against: %i[name short_label]
|
20
21
|
|
@@ -30,6 +31,8 @@ module Labimotion
|
|
30
31
|
|
31
32
|
belongs_to :element_klass, class_name: 'Labimotion::ElementKlass'
|
32
33
|
|
34
|
+
has_ancestry orphan_strategy: :adopt
|
35
|
+
|
33
36
|
has_many :collections_elements, inverse_of: :element, dependent: :destroy, class_name: 'Labimotion::CollectionsElement'
|
34
37
|
has_many :collections, through: :collections_elements
|
35
38
|
has_many :attachments, as: :attachable
|
@@ -51,7 +54,7 @@ module Labimotion
|
|
51
54
|
has_many :elements_elements, foreign_key: :parent_id, class_name: 'Labimotion::ElementsElement'
|
52
55
|
has_many :elements, through: :elements_elements, source: :element, class_name: 'Labimotion::Element'
|
53
56
|
|
54
|
-
|
57
|
+
before_save :auto_set_short_label
|
55
58
|
after_create :update_counter
|
56
59
|
before_destroy :delete_attachment
|
57
60
|
|
@@ -69,6 +72,10 @@ module Labimotion
|
|
69
72
|
end
|
70
73
|
|
71
74
|
def auto_set_short_label
|
75
|
+
return if short_label && !short_label_changed?
|
76
|
+
|
77
|
+
return if parent && (self.short_label = "#{parent.short_label}-#{parent.children.with_deleted.count.to_i.succ}")
|
78
|
+
|
72
79
|
prefix = element_klass.klass_prefix
|
73
80
|
if creator.counters[element_klass.name].nil?
|
74
81
|
creator.counters[element_klass.name] = '0'
|
@@ -99,22 +106,24 @@ module Labimotion
|
|
99
106
|
end
|
100
107
|
|
101
108
|
def thumb_svg
|
102
|
-
|
103
|
-
|
104
|
-
|
105
|
-
|
106
|
-
|
107
|
-
attachment = image_atts[0] || attachments[0]
|
108
|
-
preview = attachment.read_thumbnail if attachment
|
109
|
-
preview && Base64.encode64(preview) || 'not available'
|
110
|
-
else
|
111
|
-
image_atts = attachments.select(&:type_image?)
|
112
|
-
attachment = image_atts[0] || attachments[0]
|
113
|
-
preview = attachment&.read_thumbnail
|
114
|
-
(preview && Base64.encode64(preview)) || 'not available'
|
115
|
-
end
|
109
|
+
image_atts = attachments.select(&:type_image?)
|
110
|
+
attachment = image_atts[0] || attachments[0]
|
111
|
+
preview = attachment&.read_thumbnail
|
112
|
+
(preview && Base64.encode64(preview)) || 'not available'
|
116
113
|
end
|
117
114
|
|
115
|
+
def split(user, col_ids)
|
116
|
+
subelement = self.dup
|
117
|
+
subelement.name = self.name if self.name.present?
|
118
|
+
subelement.parent = self
|
119
|
+
subelement.properties = detach_properties(properties)
|
120
|
+
subelement.created_by = user.id
|
121
|
+
collections = (Collection.where(id: col_ids) | Collection.where(user_id: user, label: 'All', is_locked: true))
|
122
|
+
subelement.collections << collections
|
123
|
+
subelement.container = Container.create_root_container
|
124
|
+
subelement.save!
|
125
|
+
subelement
|
126
|
+
end
|
118
127
|
|
119
128
|
def migrate_workflow
|
120
129
|
return if properties.nil? || properties_release.nil?
|
@@ -0,0 +1,196 @@
|
|
1
|
+
# frozen_string_literal: true
|
2
|
+
|
3
|
+
module Labimotion
|
4
|
+
class ExportUtils
|
5
|
+
class << self
|
6
|
+
private
|
7
|
+
def uid(uuids, key, id)
|
8
|
+
return nil if uuids.nil? || key.nil? || id.nil?
|
9
|
+
|
10
|
+
new_id = uuids.fetch(key, nil)&.fetch(id, nil)
|
11
|
+
new_id || id
|
12
|
+
rescue StandardError => e
|
13
|
+
Labimotion.log_exception(e)
|
14
|
+
raise
|
15
|
+
end
|
16
|
+
|
17
|
+
def el_type(name)
|
18
|
+
return nil if name.nil?
|
19
|
+
|
20
|
+
case name
|
21
|
+
when Labimotion::FieldType::DRAG_ELEMENT
|
22
|
+
Labimotion::Prop::L_ELEMENT
|
23
|
+
when Labimotion::FieldType::DRAG_SAMPLE
|
24
|
+
Labimotion::Prop::SAMPLE
|
25
|
+
when Labimotion::FieldType::DRAG_MOLECULE
|
26
|
+
Labimotion::Prop::MOLECULE
|
27
|
+
end
|
28
|
+
rescue StandardError => e
|
29
|
+
Labimotion.log_exception(e)
|
30
|
+
name
|
31
|
+
end
|
32
|
+
|
33
|
+
def fetch_molecule(type, id)
|
34
|
+
return if type != Labimotion::FieldType::DRAG_MOLECULE || id.nil?
|
35
|
+
|
36
|
+
molecule = Molecule.find_by(id: id)
|
37
|
+
yield(molecule) if molecule.present?
|
38
|
+
rescue StandardError => e
|
39
|
+
Labimotion.log_exception(e)
|
40
|
+
raise
|
41
|
+
end
|
42
|
+
|
43
|
+
def set_seg_prop(properties, uuids, key, type, &fetch_one)
|
44
|
+
layer = properties[Labimotion::Prop::LAYERS][key]
|
45
|
+
fields = layer[Labimotion::Prop::FIELDS].select { |ss| ss['type'] == type }
|
46
|
+
fields.each do |field|
|
47
|
+
idx = properties[Labimotion::Prop::LAYERS][key][Labimotion::Prop::FIELDS].index(field)
|
48
|
+
next unless field.fetch('value', nil).is_a?(Hash)
|
49
|
+
|
50
|
+
id = field.fetch('value', nil)&.fetch('el_id', nil) unless idx.nil?
|
51
|
+
next unless id.is_a?(Integer)
|
52
|
+
next if properties[Labimotion::Prop::LAYERS][key][Labimotion::Prop::FIELDS][idx]&.fetch('value', nil).nil?
|
53
|
+
next unless properties[Labimotion::Prop::LAYERS][key][Labimotion::Prop::FIELDS][idx]['value'].is_a?(Hash)
|
54
|
+
|
55
|
+
properties[Labimotion::Prop::LAYERS][key][Labimotion::Prop::FIELDS][idx]['value']['el_id'] = uid(uuids, el_type(type), id)
|
56
|
+
end
|
57
|
+
properties
|
58
|
+
rescue StandardError => e
|
59
|
+
Labimotion.log_exception(e)
|
60
|
+
properties
|
61
|
+
end
|
62
|
+
|
63
|
+
def set_prop(properties, uuids, key, type, &fetch_one)
|
64
|
+
layer = properties.fetch(Labimotion::Prop::LAYERS, nil)&.fetch(key, nil)
|
65
|
+
return properties if layer.nil?
|
66
|
+
|
67
|
+
fields = layer[Labimotion::Prop::FIELDS]&.select { |ss| ss['type'] == type }
|
68
|
+
fields&.each do |field|
|
69
|
+
idx = properties[Labimotion::Prop::LAYERS][key][Labimotion::Prop::FIELDS].index(field)
|
70
|
+
next unless field.fetch('value', nil).is_a?(Hash)
|
71
|
+
|
72
|
+
id = field.fetch('value', nil)&.fetch('el_id', nil) unless idx.nil?
|
73
|
+
fetch_molecule(type, id, &fetch_one)
|
74
|
+
next if properties[Labimotion::Prop::LAYERS][key][Labimotion::Prop::FIELDS][idx]&.fetch('value', nil).nil?
|
75
|
+
|
76
|
+
next unless properties[Labimotion::Prop::LAYERS][key][Labimotion::Prop::FIELDS][idx]['value'].is_a?(Hash)
|
77
|
+
|
78
|
+
properties[Labimotion::Prop::LAYERS][key][Labimotion::Prop::FIELDS][idx]['value']['el_id'] = uid(uuids, el_type(type), id)
|
79
|
+
end
|
80
|
+
properties
|
81
|
+
rescue StandardError => e
|
82
|
+
Labimotion.log_exception(e)
|
83
|
+
properties
|
84
|
+
end
|
85
|
+
|
86
|
+
def set_ai(instance, properties, uuids, key)
|
87
|
+
return properties unless instance.is_a?(Element)
|
88
|
+
|
89
|
+
layer = properties[Labimotion::Prop::LAYERS][key]
|
90
|
+
layer&.fetch('ai', nil)&.each_with_index do |ai, idx|
|
91
|
+
properties[Labimotion::Prop::LAYERS][key]['ai'][idx] = uid(uuids, Labimotion::Prop::CONTAINER, ai)
|
92
|
+
end
|
93
|
+
properties
|
94
|
+
rescue StandardError => e
|
95
|
+
Labimotion.log_exception(e)
|
96
|
+
properties
|
97
|
+
end
|
98
|
+
|
99
|
+
def set_upload(instance, properties, attachments, uuids, key, type)
|
100
|
+
attachments = [] if attachments.nil?
|
101
|
+
layer = properties[Labimotion::Prop::LAYERS][key]
|
102
|
+
fields = layer[Labimotion::Prop::FIELDS].select { |ss| ss['type'] == type }
|
103
|
+
fields.each do |field|
|
104
|
+
idx = properties[Labimotion::Prop::LAYERS][key][Labimotion::Prop::FIELDS].index(field)
|
105
|
+
files = field.fetch('value', nil)&.fetch('files', nil)
|
106
|
+
files&.each_with_index do |fi, fdx|
|
107
|
+
att = Attachment.find_by(id: fi['aid'])
|
108
|
+
if att.nil?
|
109
|
+
properties[Labimotion::Prop::LAYERS][key][Labimotion::Prop::FIELDS][idx]['value']['files'].delete_at(fdx)
|
110
|
+
else
|
111
|
+
attachments += [att] if att.present?
|
112
|
+
uuaid = yield(att, {'attachable_id' => instance.class.name})
|
113
|
+
properties[Labimotion::Prop::LAYERS][key][Labimotion::Prop::FIELDS][idx]['value']['files'][fdx]['aid'] = uuaid unless att.nil?
|
114
|
+
end
|
115
|
+
end
|
116
|
+
id = field.fetch('value', nil)&.fetch('el_id', nil) unless idx.nil?
|
117
|
+
if properties[Labimotion::Prop::LAYERS][key][Labimotion::Prop::FIELDS][idx].fetch('value', nil).is_a?(Hash)
|
118
|
+
properties[Labimotion::Prop::LAYERS][key][Labimotion::Prop::FIELDS][idx]['value']['el_id'] = uid(uuids, el_type(type), id)
|
119
|
+
end
|
120
|
+
end
|
121
|
+
[properties, attachments]
|
122
|
+
rescue StandardError => e
|
123
|
+
Labimotion.log_exception(e)
|
124
|
+
[properties, attachments]
|
125
|
+
end
|
126
|
+
|
127
|
+
|
128
|
+
def set_table_prop(field, uuids, type, &fetch_one)
|
129
|
+
fields = field[Labimotion::Prop::SUBFIELDS].select { |ss| ss['type'] == type }
|
130
|
+
return field if fields.empty?
|
131
|
+
|
132
|
+
col_ids = fields.map { |x| x.values[0] }
|
133
|
+
col_ids&.each do |col_id|
|
134
|
+
field['sub_values'].each do |sub_value|
|
135
|
+
next unless sub_value.fetch(col_id, nil)&.fetch('value', nil).is_a?(Hash)
|
136
|
+
next if sub_value.fetch(col_id, nil)&.fetch('value', nil)&.fetch('el_id', nil).nil?
|
137
|
+
next unless id = sub_value[col_id]['value']['el_id']
|
138
|
+
|
139
|
+
fetch_molecule(type, id, &fetch_one)
|
140
|
+
sub_value[col_id]['value']['el_id'] = uid(uuids, el_type(type), id)
|
141
|
+
end
|
142
|
+
end
|
143
|
+
field
|
144
|
+
rescue StandardError => e
|
145
|
+
Labimotion.log_exception(e)
|
146
|
+
field
|
147
|
+
end
|
148
|
+
|
149
|
+
def set_table(properties, uuids, key, type, &fetch_one)
|
150
|
+
layer = properties[Labimotion::Prop::LAYERS][key]
|
151
|
+
fields = layer[Labimotion::Prop::FIELDS].select { |ss| ss['type'] == type }
|
152
|
+
fields&.each do |field|
|
153
|
+
next unless field['sub_values'].present? && field[Labimotion::Prop::SUBFIELDS].present?
|
154
|
+
|
155
|
+
set_table_prop(field, uuids, Labimotion::FieldType::DRAG_MOLECULE, &fetch_one)
|
156
|
+
set_table_prop(field, uuids, Labimotion::FieldType::DRAG_SAMPLE, &fetch_one)
|
157
|
+
end
|
158
|
+
properties
|
159
|
+
rescue StandardError => e
|
160
|
+
Labimotion.log_exception(e)
|
161
|
+
properties
|
162
|
+
end
|
163
|
+
end
|
164
|
+
|
165
|
+
def self.fetch_seg_properties(segment, uuids)
|
166
|
+
properties = segment['properties'] || {}
|
167
|
+
properties[Labimotion::Prop::LAYERS].keys.each do |key|
|
168
|
+
properties = set_seg_prop(properties, uuids, key, Labimotion::FieldType::DRAG_ELEMENT)
|
169
|
+
properties = set_seg_prop(properties, uuids, key, Labimotion::FieldType::DRAG_SAMPLE)
|
170
|
+
end
|
171
|
+
segment['properties'] = properties
|
172
|
+
segment
|
173
|
+
rescue StandardError => e
|
174
|
+
Labimotion.log_exception(e)
|
175
|
+
segment
|
176
|
+
end
|
177
|
+
|
178
|
+
def self.fetch_properties(instance, uuids, attachments, &fetch_one)
|
179
|
+
attachments = [] if attachments.nil?
|
180
|
+
properties = instance.properties
|
181
|
+
properties[Labimotion::Prop::LAYERS].keys.each do |key|
|
182
|
+
properties = set_ai(instance, properties, uuids, key)
|
183
|
+
properties = set_prop(properties, uuids, key, Labimotion::FieldType::DRAG_ELEMENT, &fetch_one)
|
184
|
+
properties = set_prop(properties, uuids, key, Labimotion::FieldType::DRAG_MOLECULE, &fetch_one)
|
185
|
+
properties = set_prop(properties, uuids, key, Labimotion::FieldType::DRAG_SAMPLE, &fetch_one)
|
186
|
+
properties, attachments = set_upload(instance, properties, attachments, uuids, key, Labimotion::FieldType::UPLOAD, &fetch_one)
|
187
|
+
properties = set_table(properties, uuids, key, Labimotion::FieldType::TABLE, &fetch_one)
|
188
|
+
end
|
189
|
+
instance.properties = properties
|
190
|
+
[instance, attachments]
|
191
|
+
rescue StandardError => e
|
192
|
+
Labimotion.log_exception(e)
|
193
|
+
[instance, attachments]
|
194
|
+
end
|
195
|
+
end
|
196
|
+
end
|
@@ -0,0 +1,23 @@
|
|
1
|
+
module Labimotion
|
2
|
+
## Properties Field Type
|
3
|
+
class FieldType
|
4
|
+
CHECKBOX = 'checkbox'.freeze
|
5
|
+
DATE = 'date'.freeze
|
6
|
+
DATETIME = 'datetime'.freeze
|
7
|
+
DATETIME_RANGE = 'datetime-range'.freeze
|
8
|
+
SELECT = 'select'.freeze
|
9
|
+
INTEGER = 'integer'.freeze
|
10
|
+
SYSTEM_DEFINED = 'system-defined'.freeze
|
11
|
+
DRAG = 'drag'.freeze
|
12
|
+
DRAG_ELEMENT = 'drag_element'.freeze
|
13
|
+
DRAG_MOLECULE = 'drag_molecule'.freeze
|
14
|
+
DRAG_SAMPLE = 'drag_sample'.freeze
|
15
|
+
DRAG_REACTION = 'drag_reaction'.freeze
|
16
|
+
DRAG_MS = [DRAG_MOLECULE, DRAG_SAMPLE].freeze
|
17
|
+
DRAG_ALL = [DRAG_ELEMENT, DRAG_MOLECULE, DRAG_SAMPLE, DRAG_REACTION].freeze
|
18
|
+
TABLE = 'table'.freeze
|
19
|
+
UPLOAD = 'upload'.freeze
|
20
|
+
TEXT = 'text'.freeze
|
21
|
+
TEXTAREA = 'textarea'.freeze
|
22
|
+
end
|
23
|
+
end
|