komonzu 0.2.0 → 0.2.1

This diff represents the content of publicly available package versions that have been released to one of the supported registries. The information contained in this diff is provided for informational purposes only and reflects changes between package versions as they appear in their respective public registries.
@@ -20,7 +20,15 @@ module Komonzu
20
20
  'run_list' => ['recipe[r]']
21
21
  })
22
22
  end
23
-
23
+
24
+ desc "GATK", "Install GATK"
25
+ def GATK
26
+ provision({ 'run_list' => ['recipe[nextgenseq::gatk]'] })
27
+ say(<<EOM)
28
+ To get access to useful environment variables in this session, execute the following:
29
+ source /etc/profile.d/gatk.sh
30
+ EOM
31
+ end
24
32
 
25
33
  private
26
34
 
@@ -1,3 +1,3 @@
1
1
  module Komonzu
2
- VERSION = "0.2.0"
2
+ VERSION = "0.2.1"
3
3
  end
metadata CHANGED
@@ -1,7 +1,7 @@
1
1
  --- !ruby/object:Gem::Specification
2
2
  name: komonzu
3
3
  version: !ruby/object:Gem::Version
4
- version: 0.2.0
4
+ version: 0.2.1
5
5
  prerelease:
6
6
  platform: ruby
7
7
  authors:
@@ -13,7 +13,7 @@ date: 2012-01-19 00:00:00.000000000Z
13
13
  dependencies:
14
14
  - !ruby/object:Gem::Dependency
15
15
  name: thor
16
- requirement: &70135952075000 !ruby/object:Gem::Requirement
16
+ requirement: &70225945328140 !ruby/object:Gem::Requirement
17
17
  none: false
18
18
  requirements:
19
19
  - - ! '>='
@@ -21,10 +21,10 @@ dependencies:
21
21
  version: '0'
22
22
  type: :runtime
23
23
  prerelease: false
24
- version_requirements: *70135952075000
24
+ version_requirements: *70225945328140
25
25
  - !ruby/object:Gem::Dependency
26
26
  name: rake
27
- requirement: &70135952072240 !ruby/object:Gem::Requirement
27
+ requirement: &70225945327380 !ruby/object:Gem::Requirement
28
28
  none: false
29
29
  requirements:
30
30
  - - ! '>='
@@ -32,10 +32,10 @@ dependencies:
32
32
  version: '0'
33
33
  type: :development
34
34
  prerelease: false
35
- version_requirements: *70135952072240
35
+ version_requirements: *70225945327380
36
36
  - !ruby/object:Gem::Dependency
37
37
  name: contest
38
- requirement: &70135952068860 !ruby/object:Gem::Requirement
38
+ requirement: &70225945325920 !ruby/object:Gem::Requirement
39
39
  none: false
40
40
  requirements:
41
41
  - - ~>
@@ -43,10 +43,10 @@ dependencies:
43
43
  version: 0.1.3
44
44
  type: :development
45
45
  prerelease: false
46
- version_requirements: *70135952068860
46
+ version_requirements: *70225945325920
47
47
  - !ruby/object:Gem::Dependency
48
48
  name: mocha
49
- requirement: &70135952066480 !ruby/object:Gem::Requirement
49
+ requirement: &70225945324780 !ruby/object:Gem::Requirement
50
50
  none: false
51
51
  requirements:
52
52
  - - ~>
@@ -54,7 +54,7 @@ dependencies:
54
54
  version: 0.9.8
55
55
  type: :development
56
56
  prerelease: false
57
- version_requirements: *70135952066480
57
+ version_requirements: *70225945324780
58
58
  description: Client library and command line tool to manage projects and applications
59
59
  on Komonzu.
60
60
  email:
@@ -93,7 +93,7 @@ required_ruby_version: !ruby/object:Gem::Requirement
93
93
  version: '0'
94
94
  segments:
95
95
  - 0
96
- hash: -3659503582020593831
96
+ hash: 3544987104514629643
97
97
  required_rubygems_version: !ruby/object:Gem::Requirement
98
98
  none: false
99
99
  requirements:
@@ -102,7 +102,7 @@ required_rubygems_version: !ruby/object:Gem::Requirement
102
102
  version: '0'
103
103
  segments:
104
104
  - 0
105
- hash: -3659503582020593831
105
+ hash: 3544987104514629643
106
106
  requirements: []
107
107
  rubyforge_project:
108
108
  rubygems_version: 1.8.10