kmeans 0.0.1 → 0.0.2
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- data/README.md +53 -4
- data/VERSION +1 -1
- data/kmeans.gemspec +3 -3
- data/lib/kmeans.rb +3 -1
- data/lib/kmeans/cluster.rb +0 -3
- data/script/build +27 -0
- data/spec/lib/kmeans/pair_spec.rb +4 -0
- data/spec/lib/kmeans/pearson_spec.rb +108 -100
- data/spec/lib/kmeans_spec.rb +2 -2
- metadata +3 -3
- data/script/.gitkeep +0 -0
data/README.md
CHANGED
@@ -4,10 +4,59 @@ Kmeans Cluster
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**K-means clustering**
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-
What is
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-
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-
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-
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What is Kmeans?
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---------------
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See also.
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+ http://en.wikipedia.org/wiki/K-means_clustering
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Tutorial
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--------
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require 'kmeans/pair'
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require 'kmeans/pearson'
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require 'kmeans/cluster'
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data = {
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"test01"=>
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{"hoge"=>0,
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"fuga"=>1,
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"piyo"=>0
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},
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"test02"=>
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{"hoge"=>2,
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"fuga"=>1,
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"piyo"=>3
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},
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"test03"=>
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{"hoge"=>3,
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"fuga"=>0,
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"piyo"=>1
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},
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"test04"=>
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{"hoge"=>0,
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"fuga"=>2,
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"piyo"=>0
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},
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"test05"=>
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{"hoge"=>4,
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"fuga"=>2,
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"piyo"=>3
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},
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"test06"=>
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{"hoge"=>3,
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"fuga"=>1,
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"piyo"=>1
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},
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} # 2-dimensional hash
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cluster = Kmeans::Cluster.new(data, {
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:centroids => 4,
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:loop_max => 10
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}) # Options can be omitted.
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cluster.make_cluster
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puts cluster.cluster # => {3=>["test01", "test04"], 1=>["test02"], 2=>["test03", "test05"], 0=>["test06"]}
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# Result changes for each execution
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Environment
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data/VERSION
CHANGED
@@ -1 +1 @@
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1
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0.0.
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1
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+
0.0.2
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data/kmeans.gemspec
CHANGED
@@ -5,11 +5,11 @@
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Gem::Specification.new do |s|
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s.name = "kmeans"
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s.version = "0.0.
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+
s.version = "0.0.2"
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s.required_rubygems_version = Gem::Requirement.new(">= 0") if s.respond_to? :required_rubygems_version=
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s.authors = ["id774"]
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s.date = "2012-10-
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+
s.date = "2012-10-08"
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s.description = "K-means clustering"
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s.email = "idnanashi@gmail.com"
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s.extra_rdoc_files = [
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@@ -31,7 +31,7 @@ Gem::Specification.new do |s|
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"lib/kmeans/cluster.rb",
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"lib/kmeans/pair.rb",
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"lib/kmeans/pearson.rb",
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-
"script
|
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+
"script/build",
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"spec/lib/kmeans/cluster_spec.rb",
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"spec/lib/kmeans/pair_spec.rb",
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"spec/lib/kmeans/pearson_spec.rb",
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data/lib/kmeans.rb
CHANGED
@@ -2,11 +2,13 @@
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2
2
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# -*- coding: utf-8 -*-
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3
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module Kmeans
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VERSION = "0.0.
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+
VERSION = "0.0.2"
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ROOT_DIR = File.expand_path("..", File.dirname(__FILE__))
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$:.unshift ROOT_DIR
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$:.unshift ROOT_DIR + '/lib'
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$:.unshift ROOT_DIR + '/lib/kmeans'
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require 'pair'
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require 'pearson'
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require 'cluster'
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end
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data/lib/kmeans/cluster.rb
CHANGED
data/script/build
ADDED
@@ -0,0 +1,27 @@
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#!/bin/sh
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#
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########################################################################
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# Integration Build Script
|
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#
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# Maintainer: id774 <idnanashi@gmail.com>
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#
|
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# v1.0 3/16,2012
|
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# First.
|
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########################################################################
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|
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kickstart() {
|
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export RACK_ROOT="."
|
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export RACK_ENV="test"
|
15
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}
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|
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run_tests() {
|
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rake spec
|
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}
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|
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main() {
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kickstart
|
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run_tests
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}
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|
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set -ex
|
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main
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@@ -22,7 +22,9 @@ describe Kmeans::Pair do
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result[0].should == expect[0]
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result[1].should == expect[1]
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24
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end
|
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+
end
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27
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describe '最小値と最大値と余分な値を渡す場合' do
|
26
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it "ペアが返却される" do
|
27
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min = 2
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max = 4
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@@ -32,7 +34,9 @@ describe Kmeans::Pair do
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result[0].should == expect[0]
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result[1].should == expect[1]
|
34
36
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end
|
37
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+
end
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35
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describe '同一の値を渡す場合' do
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36
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it "ペアが返却される" do
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min = 5
|
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max = 5
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@@ -4,8 +4,8 @@ require File.dirname(__FILE__) + '/../../spec_helper'
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describe Kmeans::Pearson do
|
6
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context 'の Pearson クラスにおいて' do
|
7
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-
describe '
|
8
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-
it "
|
7
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+
describe '相関係数 0.0 となる集合を渡す場合' do
|
8
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it "ピアソン相関係数が返却される" do
|
9
9
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expect = 0.0
|
10
10
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v1 = [4,2,3]
|
11
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v2 = [0,0,1]
|
@@ -13,87 +13,113 @@ describe Kmeans::Pearson do
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13
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result.should == expect
|
14
14
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end
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|
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it "
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17
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-
expect = 0.
|
18
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-
v1 = [
|
19
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-
v2 = [
|
16
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+
it "ピアソン相関係数が返却される" do
|
17
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+
expect = 0.0
|
18
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v1 = [0, 2, 0]
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19
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+
v2 = [2, 1, 0]
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20
20
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result = Kmeans::Pearson.calc(v1,v2)
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result.should == expect
|
22
22
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end
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23
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|
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it "
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expect = 0.
|
26
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-
v1 = [
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24
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+
it "ピアソン相関係数が返却される" do
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expect = 0.0
|
26
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v1 = [0, 2, 0]
|
27
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v2 = [(3/2), (1/2), (1/2)]
|
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result = Kmeans::Pearson.calc(v1,v2)
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result.should == expect
|
30
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end
|
31
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|
32
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it "ピアソン相関係数が返却される" do
|
33
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expect = 0.0
|
34
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v1 = [4, 2, 3]
|
27
35
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v2 = [(3/2), (3/2), (1/2)]
|
28
36
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result = Kmeans::Pearson.calc(v1,v2)
|
29
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result.should == expect
|
30
38
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end
|
31
39
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|
32
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-
it "
|
33
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-
expect = 0.
|
34
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-
v1 = [
|
35
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-
v2 = [(3
|
40
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+
it "ピアソン相関係数が返却される" do
|
41
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expect = 0.0
|
42
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v1 = [2, 1, 3]
|
43
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v2 = [(10/3), (1/1), (5/3)]
|
36
44
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result = Kmeans::Pearson.calc(v1,v2)
|
37
45
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result.should == expect
|
38
46
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end
|
39
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|
40
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-
it "
|
41
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expect =
|
42
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-
v1 = [0,
|
43
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v2 = [
|
48
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+
it "ピアソン相関係数が返却される" do
|
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expect = 0.0
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50
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v1 = [0, 1, 0]
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v2 = [2, 1, 0]
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result = Kmeans::Pearson.calc(v1,v2)
|
53
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result.should == expect
|
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end
|
55
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+
|
56
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it "ピアソン相関係数が返却される" do
|
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expect = 0.0
|
58
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v1 = [0, 1, 0]
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v2 = [(10/3), (1/1), (5/3)]
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result = Kmeans::Pearson.calc(v1,v2)
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result.should == expect
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46
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end
|
47
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|
48
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it "
|
64
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+
it "ピアソン相関係数が返却される" do
|
49
65
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expect = 0.0
|
50
66
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v1 = [0, 2, 0]
|
51
67
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v2 = [2, 1, 0]
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52
68
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result = Kmeans::Pearson.calc(v1,v2)
|
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result.should == expect
|
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70
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end
|
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+
end
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72
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56
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-
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57
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-
|
58
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-
|
73
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describe '相関係数が正となる集合を渡す場合' do
|
74
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it "ピアソン相関係数が返却される" do
|
75
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expect = 0.31622776601683794
|
76
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v1 = [3, 0, 1]
|
77
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+
v2 = [(2/1), (1/1), (3/1)]
|
78
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result = Kmeans::Pearson.calc(v1,v2)
|
79
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result.should == expect
|
80
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+
end
|
81
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+
|
82
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+
it "ピアソン相関係数が返却される" do
|
83
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+
expect = 0.4472135954999579
|
84
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+
v1 = [3, 0, 1]
|
59
85
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v2 = [(3/2), (3/2), (1/2)]
|
60
86
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result = Kmeans::Pearson.calc(v1,v2)
|
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87
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result.should == expect
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88
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end
|
63
89
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|
64
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-
it "
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expect = 0.
|
66
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-
v1 = [
|
90
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+
it "ピアソン相関係数が返却される" do
|
91
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+
expect = 0.8944271909999159
|
92
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+
v1 = [3, 0, 1]
|
67
93
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v2 = [(3/2), (1/2), (1/2)]
|
68
94
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result = Kmeans::Pearson.calc(v1,v2)
|
69
95
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result.should == expect
|
70
96
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end
|
71
97
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|
72
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-
it "
|
73
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-
expect = 0.
|
74
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-
v1 = [
|
75
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-
v2 = [(3/
|
98
|
+
it "ピアソン相関係数が返却される" do
|
99
|
+
expect = 0.5773502691896258
|
100
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+
v1 = [0, 2, 0]
|
101
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+
v2 = [(3/2), (3/2), (1/2)]
|
76
102
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result = Kmeans::Pearson.calc(v1,v2)
|
77
103
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result.should == expect
|
78
104
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end
|
79
105
|
|
80
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-
it "
|
81
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-
expect = 0.
|
106
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+
it "ピアソン相関係数が返却される" do
|
107
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+
expect = 0.8164965809277261
|
82
108
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v1 = [4, 2, 3]
|
83
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-
v2 = [2, 1
|
109
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+
v2 = [(3/1), (3/2), (3/1)]
|
84
110
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result = Kmeans::Pearson.calc(v1,v2)
|
85
111
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result.should == expect
|
86
112
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end
|
87
113
|
|
88
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-
it "
|
89
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-
expect = 0.
|
114
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+
it "ピアソン相関係数が返却される" do
|
115
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+
expect = 0.5
|
90
116
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v1 = [4, 2, 3]
|
91
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-
v2 = [
|
117
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+
v2 = [2, 1, 0]
|
92
118
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result = Kmeans::Pearson.calc(v1,v2)
|
93
119
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result.should == expect
|
94
120
|
end
|
95
121
|
|
96
|
-
it "
|
122
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+
it "ピアソン相関係数が返却される" do
|
97
123
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expect = 0.7071067811865475
|
98
124
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v1 = [4, 2, 3]
|
99
125
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v2 = [(3/2), (1/2), (1/2)]
|
@@ -101,7 +127,7 @@ describe Kmeans::Pearson do
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|
101
127
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result.should == expect
|
102
128
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end
|
103
129
|
|
104
|
-
it "
|
130
|
+
it "ピアソン相関係数が返却される" do
|
105
131
|
expect = 0.6666666666666666
|
106
132
|
v1 = [3, 1, 1]
|
107
133
|
v2 = [(3/1), (3/2), (3/1)]
|
@@ -109,7 +135,7 @@ describe Kmeans::Pearson do
|
|
109
135
|
result.should == expect
|
110
136
|
end
|
111
137
|
|
112
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-
it "
|
138
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+
it "ピアソン相関係数が返却される" do
|
113
139
|
expect = 0.8164965809277261
|
114
140
|
v1 = [3, 1, 1]
|
115
141
|
v2 = [2, 1, 0]
|
@@ -117,7 +143,7 @@ describe Kmeans::Pearson do
|
|
117
143
|
result.should == expect
|
118
144
|
end
|
119
145
|
|
120
|
-
it "
|
146
|
+
it "ピアソン相関係数が返却される" do
|
121
147
|
expect = 0.5773502691896258
|
122
148
|
v1 = [3, 1, 1]
|
123
149
|
v2 = [(3/2), (3/2), (1/2)]
|
@@ -125,55 +151,57 @@ describe Kmeans::Pearson do
|
|
125
151
|
result.should == expect
|
126
152
|
end
|
127
153
|
|
128
|
-
it "
|
129
|
-
expect =
|
130
|
-
v1 = [3,
|
131
|
-
v2 = [(
|
154
|
+
it "ピアソン相関係数が返却される" do
|
155
|
+
expect = 0.31622776601683794
|
156
|
+
v1 = [3, 0, 1]
|
157
|
+
v2 = [(2/1), (1/1), (3/1)]
|
132
158
|
result = Kmeans::Pearson.calc(v1,v2)
|
133
159
|
result.should == expect
|
134
160
|
end
|
135
161
|
|
136
|
-
it "
|
137
|
-
expect =
|
138
|
-
v1 = [0, 1
|
139
|
-
v2 = [
|
162
|
+
it "ピアソン相関係数が返却される" do
|
163
|
+
expect = 0.6324555320336759
|
164
|
+
v1 = [3, 0, 1]
|
165
|
+
v2 = [2, 1, 0]
|
140
166
|
result = Kmeans::Pearson.calc(v1,v2)
|
141
167
|
result.should == expect
|
142
168
|
end
|
169
|
+
end
|
143
170
|
|
144
|
-
|
145
|
-
|
146
|
-
|
147
|
-
|
171
|
+
describe '相関係数が負となる集合を渡す場合' do
|
172
|
+
it "ピアソン相関係数が返却される" do
|
173
|
+
expect = -0.6666666666666666
|
174
|
+
v1 = [0, 2, 0]
|
175
|
+
v2 = [(3/1), (3/2), (3/1)]
|
148
176
|
result = Kmeans::Pearson.calc(v1,v2)
|
149
177
|
result.should == expect
|
150
178
|
end
|
151
179
|
|
152
|
-
it "
|
153
|
-
expect =
|
154
|
-
v1 = [0, 1
|
180
|
+
it "ピアソン相関係数が返却される" do
|
181
|
+
expect = -0.4472135954999579
|
182
|
+
v1 = [3, 0, 1]
|
155
183
|
v2 = [(0/1), (3/2), (0/1)]
|
156
184
|
result = Kmeans::Pearson.calc(v1,v2)
|
157
185
|
result.should == expect
|
158
186
|
end
|
159
187
|
|
160
|
-
it "
|
161
|
-
expect = 0.
|
162
|
-
v1 = [0,
|
163
|
-
v2 = [(
|
188
|
+
it "ピアソン相関係数が返却される" do
|
189
|
+
expect = -0.8164965809277261
|
190
|
+
v1 = [0, 2, 0]
|
191
|
+
v2 = [(2/1), (1/1), (3/1)]
|
164
192
|
result = Kmeans::Pearson.calc(v1,v2)
|
165
193
|
result.should == expect
|
166
194
|
end
|
167
195
|
|
168
|
-
it "
|
169
|
-
expect =
|
170
|
-
v1 = [
|
196
|
+
it "ピアソン相関係数が返却される" do
|
197
|
+
expect = -0.7071067811865475
|
198
|
+
v1 = [0, 1, 0]
|
171
199
|
v2 = [(2/1), (1/1), (3/1)]
|
172
200
|
result = Kmeans::Pearson.calc(v1,v2)
|
173
201
|
result.should == expect
|
174
202
|
end
|
175
203
|
|
176
|
-
it "
|
204
|
+
it "ピアソン相関係数が返却される" do
|
177
205
|
expect = -0.5
|
178
206
|
v1 = [2, 1, 3]
|
179
207
|
v2 = [2, 1, 0]
|
@@ -181,47 +209,35 @@ describe Kmeans::Pearson do
|
|
181
209
|
result.should == expect
|
182
210
|
end
|
183
211
|
|
184
|
-
it "
|
212
|
+
it "ピアソン相関係数が返却される" do
|
185
213
|
expect = -0.7071067811865475
|
186
214
|
v1 = [2, 1, 3]
|
187
215
|
v2 = [(0/1), (3/2), (0/1)]
|
188
216
|
result = Kmeans::Pearson.calc(v1,v2)
|
189
217
|
result.should == expect
|
190
218
|
end
|
219
|
+
end
|
191
220
|
|
192
|
-
|
193
|
-
|
194
|
-
|
195
|
-
|
221
|
+
describe '相関係数が 1.0 の場合' do
|
222
|
+
it "ピアソン相関係数が返却される" do
|
223
|
+
expect = 1.0
|
224
|
+
v1 = [0, 1, 0]
|
225
|
+
v2 = [(0/1), (3/2), (0/1)]
|
196
226
|
result = Kmeans::Pearson.calc(v1,v2)
|
197
227
|
result.should == expect
|
198
228
|
end
|
199
229
|
|
200
|
-
it "
|
201
|
-
expect = 0
|
202
|
-
v1 = [
|
230
|
+
it "ピアソン相関係数が返却される" do
|
231
|
+
expect = 1.0
|
232
|
+
v1 = [2, 1, 3]
|
203
233
|
v2 = [(2/1), (1/1), (3/1)]
|
204
234
|
result = Kmeans::Pearson.calc(v1,v2)
|
205
235
|
result.should == expect
|
206
236
|
end
|
237
|
+
end
|
207
238
|
|
208
|
-
|
209
|
-
|
210
|
-
v1 = [3, 0, 1]
|
211
|
-
v2 = [2, 1, 0]
|
212
|
-
result = Kmeans::Pearson.calc(v1,v2)
|
213
|
-
result.should == expect
|
214
|
-
end
|
215
|
-
|
216
|
-
it "ピアソン相関関数が返却される" do
|
217
|
-
expect = -0.4472135954999579
|
218
|
-
v1 = [3, 0, 1]
|
219
|
-
v2 = [(0/1), (3/2), (0/1)]
|
220
|
-
result = Kmeans::Pearson.calc(v1,v2)
|
221
|
-
result.should == expect
|
222
|
-
end
|
223
|
-
|
224
|
-
it "ピアソン相関関数が返却される" do
|
239
|
+
describe '相関係数が 1 を越える場合' do
|
240
|
+
it "ピアソン相関係数が返却される" do
|
225
241
|
expect = 1.0327955589886444
|
226
242
|
v1 = [3, 0, 1]
|
227
243
|
v2 = [(10/3), (1/1), (5/3)]
|
@@ -229,26 +245,18 @@ describe Kmeans::Pearson do
|
|
229
245
|
result.should == expect
|
230
246
|
end
|
231
247
|
|
232
|
-
it "
|
233
|
-
expect =
|
234
|
-
v1 = [0, 2, 0]
|
235
|
-
v2 = [(2/1), (1/1), (3/1)]
|
236
|
-
result = Kmeans::Pearson.calc(v1,v2)
|
237
|
-
result.should == expect
|
238
|
-
end
|
239
|
-
|
240
|
-
it "ピアソン相関関数が返却される" do
|
241
|
-
expect = 0.0
|
248
|
+
it "ピアソン相関係数が返却される" do
|
249
|
+
expect = 1.1547005383792517
|
242
250
|
v1 = [0, 2, 0]
|
243
|
-
v2 = [
|
251
|
+
v2 = [(0/1), (3/2), (0/1)]
|
244
252
|
result = Kmeans::Pearson.calc(v1,v2)
|
245
253
|
result.should == expect
|
246
254
|
end
|
247
255
|
|
248
|
-
it "
|
256
|
+
it "ピアソン相関係数が返却される" do
|
249
257
|
expect = 1.1547005383792517
|
250
|
-
v1 = [
|
251
|
-
v2 = [(
|
258
|
+
v1 = [3, 1, 1]
|
259
|
+
v2 = [(3/2), (1/2), (1/2)]
|
252
260
|
result = Kmeans::Pearson.calc(v1,v2)
|
253
261
|
result.should == expect
|
254
262
|
end
|
data/spec/lib/kmeans_spec.rb
CHANGED
@@ -2,10 +2,10 @@
|
|
2
2
|
|
3
3
|
require File.dirname(__FILE__) + '/../spec_helper'
|
4
4
|
|
5
|
-
describe Kmeans
|
5
|
+
describe Kmeans do
|
6
6
|
context 'のバージョンを参照した場合' do
|
7
7
|
it "バージョンが正しく表示される" do
|
8
|
-
expect = '0.0.
|
8
|
+
expect = '0.0.2'
|
9
9
|
Kmeans.const_get(:VERSION).should be_true
|
10
10
|
Kmeans.const_get(:VERSION).should == expect
|
11
11
|
end
|
metadata
CHANGED
@@ -1,7 +1,7 @@
|
|
1
1
|
--- !ruby/object:Gem::Specification
|
2
2
|
name: kmeans
|
3
3
|
version: !ruby/object:Gem::Version
|
4
|
-
version: 0.0.
|
4
|
+
version: 0.0.2
|
5
5
|
prerelease:
|
6
6
|
platform: ruby
|
7
7
|
authors:
|
@@ -9,7 +9,7 @@ authors:
|
|
9
9
|
autorequire:
|
10
10
|
bindir: bin
|
11
11
|
cert_chain: []
|
12
|
-
date: 2012-10-
|
12
|
+
date: 2012-10-08 00:00:00.000000000 Z
|
13
13
|
dependencies:
|
14
14
|
- !ruby/object:Gem::Dependency
|
15
15
|
name: cucumber
|
@@ -81,7 +81,7 @@ files:
|
|
81
81
|
- lib/kmeans/cluster.rb
|
82
82
|
- lib/kmeans/pair.rb
|
83
83
|
- lib/kmeans/pearson.rb
|
84
|
-
- script
|
84
|
+
- script/build
|
85
85
|
- spec/lib/kmeans/cluster_spec.rb
|
86
86
|
- spec/lib/kmeans/pair_spec.rb
|
87
87
|
- spec/lib/kmeans/pearson_spec.rb
|
data/script/.gitkeep
DELETED
File without changes
|