jumoku 0.1.1 → 0.1.2
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- data/Gemfile +4 -0
- data/lib/jumoku.rb +4 -2
- data/lib/jumoku/version.rb +1 -1
- data/spec/raw_tree_spec.rb +353 -0
- data/spec/spec.opts +4 -0
- data/spec/spec_helper.rb +14 -0
- data/spec/tree_spec.rb +553 -0
- data/vendor/git/graphy/CREDITS.md +31 -0
- data/vendor/git/graphy/LICENSE +35 -0
- data/vendor/git/graphy/README.md +186 -0
- data/vendor/git/graphy/Rakefile +61 -0
- data/vendor/git/graphy/TODO.md +20 -0
- data/vendor/git/graphy/VERSION +1 -0
- data/vendor/git/graphy/examples/graph_self.rb +56 -0
- data/vendor/git/graphy/examples/module_graph.jpg +0 -0
- data/vendor/git/graphy/examples/module_graph.rb +14 -0
- data/vendor/git/graphy/examples/self_graph.jpg +0 -0
- data/vendor/git/graphy/examples/visualize.jpg +0 -0
- data/vendor/git/graphy/examples/visualize.rb +10 -0
- data/vendor/git/graphy/graphy.gemspec +149 -0
- data/vendor/git/graphy/lib/graphy.rb +90 -0
- data/vendor/git/graphy/lib/graphy/adjacency_graph.rb +224 -0
- data/vendor/git/graphy/lib/graphy/arc.rb +65 -0
- data/vendor/git/graphy/lib/graphy/arc_number.rb +52 -0
- data/vendor/git/graphy/lib/graphy/biconnected.rb +84 -0
- data/vendor/git/graphy/lib/graphy/chinese_postman.rb +91 -0
- data/vendor/git/graphy/lib/graphy/classes/graph_classes.rb +28 -0
- data/vendor/git/graphy/lib/graphy/common.rb +63 -0
- data/vendor/git/graphy/lib/graphy/comparability.rb +63 -0
- data/vendor/git/graphy/lib/graphy/directed_graph.rb +76 -0
- data/vendor/git/graphy/lib/graphy/directed_graph/algorithms.rb +92 -0
- data/vendor/git/graphy/lib/graphy/directed_graph/distance.rb +167 -0
- data/vendor/git/graphy/lib/graphy/dot.rb +94 -0
- data/vendor/git/graphy/lib/graphy/edge.rb +37 -0
- data/vendor/git/graphy/lib/graphy/ext.rb +79 -0
- data/vendor/git/graphy/lib/graphy/graph.rb +631 -0
- data/vendor/git/graphy/lib/graphy/graph_api.rb +35 -0
- data/vendor/git/graphy/lib/graphy/labels.rb +113 -0
- data/vendor/git/graphy/lib/graphy/maximum_flow.rb +77 -0
- data/vendor/git/graphy/lib/graphy/ruby_compatibility.rb +17 -0
- data/vendor/git/graphy/lib/graphy/search.rb +511 -0
- data/vendor/git/graphy/lib/graphy/strong_components.rb +93 -0
- data/vendor/git/graphy/lib/graphy/support/support.rb +9 -0
- data/vendor/git/graphy/lib/graphy/undirected_graph.rb +57 -0
- data/vendor/git/graphy/lib/graphy/undirected_graph/algorithms.rb +90 -0
- data/vendor/git/graphy/spec/biconnected_spec.rb +27 -0
- data/vendor/git/graphy/spec/chinese_postman_spec.rb +27 -0
- data/vendor/git/graphy/spec/community_spec.rb +44 -0
- data/vendor/git/graphy/spec/complement_spec.rb +27 -0
- data/vendor/git/graphy/spec/digraph_distance_spec.rb +121 -0
- data/vendor/git/graphy/spec/digraph_spec.rb +339 -0
- data/vendor/git/graphy/spec/dot_spec.rb +48 -0
- data/vendor/git/graphy/spec/edge_spec.rb +159 -0
- data/vendor/git/graphy/spec/inspection_spec.rb +40 -0
- data/vendor/git/graphy/spec/multi_edge_spec.rb +32 -0
- data/vendor/git/graphy/spec/neighborhood_spec.rb +38 -0
- data/vendor/git/graphy/spec/properties_spec.rb +146 -0
- data/vendor/git/graphy/spec/search_spec.rb +227 -0
- data/vendor/git/graphy/spec/spec.opts +4 -0
- data/vendor/git/graphy/spec/spec_helper.rb +56 -0
- data/vendor/git/graphy/spec/strong_components_spec.rb +61 -0
- data/vendor/git/graphy/spec/triangulated_spec.rb +125 -0
- data/vendor/git/graphy/spec/undirected_graph_spec.rb +220 -0
- data/vendor/git/graphy/vendor/priority-queue/CHANGELOG +33 -0
- data/vendor/git/graphy/vendor/priority-queue/Makefile +140 -0
- data/vendor/git/graphy/vendor/priority-queue/README +133 -0
- data/vendor/git/graphy/vendor/priority-queue/benchmark/dijkstra.rb +171 -0
- data/vendor/git/graphy/vendor/priority-queue/compare_comments.rb +49 -0
- data/vendor/git/graphy/vendor/priority-queue/doc/c-vs-rb.png +0 -0
- data/vendor/git/graphy/vendor/priority-queue/doc/compare_big.gp +14 -0
- data/vendor/git/graphy/vendor/priority-queue/doc/compare_big.png +0 -0
- data/vendor/git/graphy/vendor/priority-queue/doc/compare_small.gp +15 -0
- data/vendor/git/graphy/vendor/priority-queue/doc/compare_small.png +0 -0
- data/vendor/git/graphy/vendor/priority-queue/doc/results.csv +37 -0
- data/vendor/git/graphy/vendor/priority-queue/ext/priority_queue/CPriorityQueue/extconf.rb +2 -0
- data/vendor/git/graphy/vendor/priority-queue/ext/priority_queue/CPriorityQueue/priority_queue.c +947 -0
- data/vendor/git/graphy/vendor/priority-queue/lib/priority_queue.rb +14 -0
- data/vendor/git/graphy/vendor/priority-queue/lib/priority_queue/c_priority_queue.rb +1 -0
- data/vendor/git/graphy/vendor/priority-queue/lib/priority_queue/poor_priority_queue.rb +46 -0
- data/vendor/git/graphy/vendor/priority-queue/lib/priority_queue/ruby_priority_queue.rb +526 -0
- data/vendor/git/graphy/vendor/priority-queue/priority_queue.so +0 -0
- data/vendor/git/graphy/vendor/priority-queue/setup.rb +1551 -0
- data/vendor/git/graphy/vendor/priority-queue/test/priority_queue_test.rb +371 -0
- data/vendor/git/graphy/vendor/rdot.rb +360 -0
- metadata +83 -1
@@ -0,0 +1,94 @@
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module Graphy
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module Dot
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#FIXME: don't really understood where we stand with the dot generators.
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# RDoc ships with a dot.rb which seems pretty efficient.
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# Are these helpers still needed, and if not, how should we replace them?
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# Creates a DOT::DOTDigraph for directed graphs or a DOT::DOTSubgraph for
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# undirected graphs.
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#
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# @param [Hash] params can contain any graph property specified in
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# rdot.rb. If an edge or vertex label is a kind of Hash, then the keys
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# which match dot properties will be used as well.
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# @return [DOT::DOTDigraph, DOT::DOTSubgraph]
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def to_dot_graph(params = {})
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params['name'] ||= self.class.name.gsub(/:/, '_')
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fontsize = params['fontsize'] ? params['fontsize'] : '8'
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graph = (directed? ? DOT::DOTDigraph : DOT::DOTSubgraph).new(params)
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edge_klass = directed? ? DOT::DOTDirectedArc : DOT::DOTArc
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vertices.each do |v|
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name = v.to_s || v.__id__.to_s
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name = name.dup.gsub(/"/, "'")
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params = { 'name' => '"'+ name +'"',
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'fontsize' => fontsize,
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'label' => name}
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v_label = vertex_label(v)
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params.merge!(v_label) if v_label and v_label.kind_of? Hash
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graph << DOT::DOTNode.new(params)
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end
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edges.each do |e|
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if e.source.to_s.nil?
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source_label = e.source.__id__.to_s
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else
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source_label = e.source.to_s.dup
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end
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if e.target.to_s.nil?
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target_label = e.target.__id__.to_s
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else
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target_label = e.target.to_s.dup
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end
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source_label.gsub!(/"/, "'")
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target_label.gsub!(/"/, "'")
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params = { 'from' => '"'+ source_label + '"',
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'to' => '"'+ target_label + '"',
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'fontsize' => fontsize }
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e_label = edge_label(e)
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params.merge!(e_label) if e_label and e_label.kind_of? Hash
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graph << edge_klass.new(params)
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end
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graph
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end
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# Output the dot format as a string
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def to_dot(params = {})
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to_dot_graph(params).to_s
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end
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# Call +dotty+ for the graph which is written to the file 'graph.dot'
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# in the # current directory.
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def dotty(params = {}, dotfile = 'graph.dot')
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File.open(dotfile, 'w') {|f| f << to_dot(params) }
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system('dotty', dotfile)
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end
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# Use +dot+ to create a graphical representation of the graph. Returns the
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# filename of the graphics file.
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def write_to_graphic_file(fmt = 'png', dotfile = 'graph')
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src = dotfile + '.dot'
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dot = dotfile + '.' + fmt
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# DOT::DOTSubgraph creates subgraphs, but that's broken.
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buffer = self.to_dot
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buffer.gsub!(/^subgraph/, "graph")
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File.open(src, 'w') {|f| f << buffer << "\n"}
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system( "dot -T#{fmt} #{src} -o #{dot}" )
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dot
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end
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alias as_dot_graphic write_to_graphic_file
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end # Dot
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end # module Graphy
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module Graphy
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# An undirected edge is simply an undirected pair (source, target) used in
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# undirected graphs. Edge[u,v] == Edge[v,u]
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class Edge < Arc
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# Equality allows for the swapping of source and target
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def eql?(other) super or (self.class == other.class and target==other.source and source==other.target); end
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# Alias for eql?
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alias == eql?
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# Hash is defined such that source and target can be reversed and the
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# hash value will be the same
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def hash() source.hash ^ target.hash; end
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# Sort support
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def <=>(rhs)
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[[source,target].max,[source,target].min] <=>
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[[rhs.source,rhs.target].max,[rhs.source,rhs.target].min]
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end
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# Edge[1,2].to_s == "(1=2 'label)"
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def to_s
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l = label ? " '#{label.to_s}'" : ''
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s = source.to_s
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t = target.to_s
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"(#{[s,t].min}=#{[s,t].max}#{l})"
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end
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end
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class MultiEdge < Edge
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include ArcNumber
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end
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end
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class Object
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# Get the singleton class of the object.
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# Depending on the object which requested its singleton class,
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# a `module_eval` or a `class_eval` will be performed.
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# Object of special constant type (`Fixnum`, `NilClass`, `TrueClass`,
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# `FalseClass` and `Symbol`) return `nil` as they do not have a
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# singleton class.
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#
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# @return the singleton class
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def singleton_class
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if self.respond_to? :module_eval
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self.module_eval("class << self; self; end")
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elsif self.respond_to? :instance_eval
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begin
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self.instance_eval("class << self; self; end")
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rescue TypeError
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nil
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end
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end
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end
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# Check wether the object is of the specified kind.
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# If the receiver has a singleton class, will also perform
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# the check on its singleton class' ancestors, so as to catch
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# any included modules for object instances.
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#
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# Example:
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#
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# class A; include Digraph; end
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# a.singleton_class.ancestors
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# # => [Graphy::GraphAPI, Graphy::DirectedGraph::Algorithms, ...
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# Graphy::Labels, Enumerable, Object, Graphy, Kernel, BasicObject]
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# a.is_a? Graphy::Graph
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# # => true
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#
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# @param [Class] klass
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# @return [Boolean]
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def is_a? klass
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sc = self.singleton_class
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if not sc.nil?
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self.singleton_class.ancestors.include?(klass) || super
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else
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super
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end
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end
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end
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class Module
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# Helper which purpose is, given a class including a module,
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# to make each methods defined within a module's submodule `ClassMethods`
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# available as class methods to the receiving class.
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#
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# Example:
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#
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# module A
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# extends_host
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# module ClassMethods
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# def selfy; puts "class method for #{self}"; end
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# end
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# end
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#
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# class B; include A; end
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#
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# B.selfy
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# # => class method for B
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#
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# @option *params [Symbol] :with (:ClassMethods) the name of the
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# module to extend the receiver with
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def extends_host(*params)
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args = (params.pop if params.last.is_a? Hash) || {}
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@_extension_module = args[:with] || :ClassMethods
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def included(base)
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unless @_extension_module.nil?
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base.extend(self.const_get(@_extension_module))
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end
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end
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end
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end
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module Graphy
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# Using the methods required by the {GraphAPI}, it implements all the
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# *basic* functions of a {Graph} using *only* functions
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# requested in {GraphAPI}. The process is under the control of the pattern
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# {AdjacencyGraphBuilder}, unless a specific implementation is specified
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# during initialization.
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#
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# An actual, complete implementation still needs to be done using this cheap result,
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# hence {Digraph}, {UndirectedGraph} and their roomates.
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module GraphBuilder
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include Enumerable
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include Labels
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include Dot
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#def self.[](*a)
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#puts self
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#self.new.from_array(*a)
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#end
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# after the class->module transition, has been moved at implementation level,
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# using a helper (extends_host)
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extends_host
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module ClassMethods
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def [](*a)
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self.new.from_array(*a)
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end
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end
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# Creates a generic graph.
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#
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# @param [Hash(Graphy::Graph, Array)] *params initialization parameters.
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# See {AdjacencyGraphBuilder#implementation_initialize} for more details.
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# @return [Graph]
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def initialize(*params)
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raise ArgumentError if params.any? do |p|
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# FIXME: checking wether it's a GraphBuilder (module) is not sufficient
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# and the is_a? redefinition trick (instance_evaling) should be
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# completed by a clever way to check the actual class of p.
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# Maybe using ObjectSpace to get the available Graph classes?
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!(p.is_a? Graphy::GraphBuilder or p.is_a? Array or p.is_a? Hash)
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end
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args = params.last || {}
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class << self
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self
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end.module_eval do
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# These inclusions trigger some validations checks by the way.
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include(args[:implementation] ? args[:implementation] : Graphy::AdjacencyGraphBuilder)
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include(args[:algorithmic_category] ? args[:algorithmic_category] : Graphy::DigraphBuilder )
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include Graphy::GraphAPI
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end
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implementation_initialize(*params)
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end
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# Shortcut for creating a Graph.
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#
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# Using an arry of implicit {Arc}, specifying the vertices:
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#
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# Graphy::Graph[1,2, 2,3, 2,4, 4,5].edges.to_a.to_s
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# # => "(1-2)(2-3)(2-4)(4-5)"
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#
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# Using a Hash for specifying labels along the way:
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#
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# Graphy::Graph[ [:a,:b] => 3, [:b,:c] => 4 ] (note: do not use for Multi or Pseudo graphs)
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#
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# @param [Array, Hash] *a
|
70
|
+
# @return [Graph]
|
71
|
+
def from_array(*a)
|
72
|
+
if a.size == 1 and a[0].is_a? Hash
|
73
|
+
# Convert to edge class
|
74
|
+
a[0].each do |k,v|
|
75
|
+
#FIXME, edge class shouldn't be assume here!!!
|
76
|
+
if edge_class.include? Graphy::ArcNumber
|
77
|
+
add_edge!(edge_class[k[0],k[1],nil,v])
|
78
|
+
else
|
79
|
+
add_edge!(edge_class[k[0],k[1],v])
|
80
|
+
end
|
81
|
+
end
|
82
|
+
#FIXME, edge class shouldn't be assume here!!!
|
83
|
+
elsif a[0].is_a? Graphy::Arc
|
84
|
+
a.each{ |e| add_edge!(e); self[e] = e.label}
|
85
|
+
elsif a.size % 2 == 0
|
86
|
+
0.step(a.size-1, 2) {|i| add_edge!(a[i], a[i+1])}
|
87
|
+
else
|
88
|
+
raise ArgumentError
|
89
|
+
end
|
90
|
+
self
|
91
|
+
end
|
92
|
+
|
93
|
+
# Non destructive version of {AdjacencyGraphBuilder#add_vertex!} (works on a copy of the graph).
|
94
|
+
#
|
95
|
+
# @param [vertex] v
|
96
|
+
# @param [Label] l
|
97
|
+
# @return [Graph] a new graph with the supplementary vertex
|
98
|
+
def add_vertex(v, l = nil)
|
99
|
+
x = self.class.new(self)
|
100
|
+
x.add_vertex!(v, l)
|
101
|
+
end
|
102
|
+
|
103
|
+
# Non destructive version {AdjacencyGraphBuilder#add_edge!} (works on a copy of the graph).
|
104
|
+
#
|
105
|
+
# @param [vertex] u
|
106
|
+
# @param [vertex] v
|
107
|
+
# @param [Label] l
|
108
|
+
# @return [Graph] a new graph with the supplementary edge
|
109
|
+
def add_edge(u, v = nil, l = nil)
|
110
|
+
x = self.class.new(self)
|
111
|
+
x.add_edge!(u, v, l)
|
112
|
+
end
|
113
|
+
alias add_arc add_edge
|
114
|
+
|
115
|
+
# Non destructive version of {AdjacencyGraphBuilder#remove_vertex!} (works on a copy of the graph).
|
116
|
+
#
|
117
|
+
# @param [vertex] v
|
118
|
+
# @return [Graph] a new graph without the specified vertex
|
119
|
+
def remove_vertex(v)
|
120
|
+
x = self.class.new(self)
|
121
|
+
x.remove_vertex!(v)
|
122
|
+
end
|
123
|
+
|
124
|
+
# Non destructive version {AdjacencyGraphBuilder#remove_edge!} (works on a copy of the graph).
|
125
|
+
#
|
126
|
+
# @param [vertex] u
|
127
|
+
# @param [vertex] v
|
128
|
+
# @return [Graph] a new graph without the specified edge
|
129
|
+
def remove_edge(u, v = nil)
|
130
|
+
x = self.class.new(self)
|
131
|
+
x.remove_edge!(u, v)
|
132
|
+
end
|
133
|
+
alias remove_arc remove_edge
|
134
|
+
|
135
|
+
# Computes the adjacent portions of the Graph.
|
136
|
+
#
|
137
|
+
# The options specify the parameters about the adjacency search.
|
138
|
+
# Note: it is probably more efficently done in the implementation class.
|
139
|
+
#
|
140
|
+
# @param [vertex, Edge] x can either be a vertex an edge
|
141
|
+
# @option options [Symbol] :type (:vertices) can be either `:edges` or `:vertices`
|
142
|
+
# @option options [Symbol] :direction (:all) can be `:in`, `:out` or `:all`
|
143
|
+
# @return [Array] an array of the adjacent portions
|
144
|
+
# @fixme
|
145
|
+
def adjacent(x, options = {})
|
146
|
+
d = directed? ? (options[:direction] || :out) : :all
|
147
|
+
|
148
|
+
# Discharge the easy ones first.
|
149
|
+
return [x.source] if x.is_a? Arc and options[:type] == :vertices and d == :in
|
150
|
+
return [x.target] if x.is_a? Arc and options[:type] == :vertices and d == :out
|
151
|
+
return [x.source, x.target] if x.is_a? Arc and options[:type] != :edges and d == :all
|
152
|
+
|
153
|
+
(options[:type] == :edges ? edges : to_a).select { |u| adjacent?(x,u,d) }
|
154
|
+
end
|
155
|
+
#FIXME: This is a hack around a serious problem
|
156
|
+
alias graph_adjacent adjacent
|
157
|
+
|
158
|
+
|
159
|
+
# Adds all specified vertices to the vertex set.
|
160
|
+
#
|
161
|
+
# @param [#each] *a an Enumerable vertices set
|
162
|
+
# @return [Graph] `self`
|
163
|
+
def add_vertices!(*a)
|
164
|
+
a.each { |v| add_vertex! v }
|
165
|
+
self
|
166
|
+
end
|
167
|
+
|
168
|
+
# Same as {GraphBuilder#add_vertices! add_vertices!} but works on copy of the receiver.
|
169
|
+
#
|
170
|
+
# @param [#each] *a
|
171
|
+
# @return [Graph] a modified copy of `self`
|
172
|
+
def add_vertices(*a)
|
173
|
+
x = self.class.new(self)
|
174
|
+
x.add_vertices!(*a)
|
175
|
+
self
|
176
|
+
end
|
177
|
+
|
178
|
+
# Adds all edges mentionned in the specified Enumerable to the edge set.
|
179
|
+
#
|
180
|
+
# Elements of the Enumerable can be either two-element arrays or instances of
|
181
|
+
# {Edge} or {Arc}.
|
182
|
+
#
|
183
|
+
# @param [#each] *a an Enumerable edges set
|
184
|
+
# @return [Graph] `self`
|
185
|
+
def add_edges!(*a)
|
186
|
+
a.each { |edge| add_edge!(edge) }
|
187
|
+
self
|
188
|
+
end
|
189
|
+
alias add_arcs! add_edges!
|
190
|
+
|
191
|
+
# Same as {GraphBuilder#add_egdes! add_edges!} but works on a copy of the receiver.
|
192
|
+
#
|
193
|
+
# @param [#each] *a an Enumerable edges set
|
194
|
+
# @return [Graph] a modified copy of `self`
|
195
|
+
def add_edges(*a)
|
196
|
+
x = self.class.new(self)
|
197
|
+
x.add_edges!(*a)
|
198
|
+
self
|
199
|
+
end
|
200
|
+
alias add_arcs add_edges
|
201
|
+
|
202
|
+
# Removes all vertices mentionned in the specified Enumerable from the graph.
|
203
|
+
#
|
204
|
+
# The process relies on {GraphBuilder#remove_vertex! remove_vertex!}.
|
205
|
+
#
|
206
|
+
# @param [#each] *a an Enumerable vertices set
|
207
|
+
# @return [Graph] `self`
|
208
|
+
def remove_vertices!(*a)
|
209
|
+
a.each { |v| remove_vertex! v }
|
210
|
+
end
|
211
|
+
alias delete_vertices! remove_vertices!
|
212
|
+
|
213
|
+
# Same as {GraphBuilder#remove_vertices! remove_vertices!} but works on a copy of the receiver.
|
214
|
+
#
|
215
|
+
# @param [#each] *a a vertex Enumerable set
|
216
|
+
# @return [Graph] a modified copy of `self`
|
217
|
+
def remove_vertices(*a)
|
218
|
+
x = self.class.new(self)
|
219
|
+
x.remove_vertices(*a)
|
220
|
+
end
|
221
|
+
alias delete_vertices remove_vertices
|
222
|
+
|
223
|
+
# Removes all edges mentionned in the specified Enumerable from the graph.
|
224
|
+
#
|
225
|
+
# The process relies on {GraphBuilder#remove_edges! remove_edges!}.
|
226
|
+
#
|
227
|
+
# @param [#each] *a an Enumerable edges set
|
228
|
+
# @return [Graph] `self`
|
229
|
+
def remove_edges!(*a)
|
230
|
+
a.each { |e| remove_edge! e }
|
231
|
+
end
|
232
|
+
alias remove_arcs! remove_edges!
|
233
|
+
alias delete_edges! remove_edges!
|
234
|
+
alias delete_arcs! remove_edges!
|
235
|
+
|
236
|
+
# Same as {GraphBuilder#remove_edges! remove_edges!} but works on a copy of the receiver.
|
237
|
+
#
|
238
|
+
# @param [#each] *a an Enumerable edges set
|
239
|
+
# @return [Graph] a modified copy of `self`
|
240
|
+
def remove_edges(*a)
|
241
|
+
x = self.class.new(self)
|
242
|
+
x.remove_edges!(*a)
|
243
|
+
end
|
244
|
+
alias remove_arcs remove_edges
|
245
|
+
alias delete_edges remove_edges
|
246
|
+
alias delete_arcs remove_edges
|
247
|
+
|
248
|
+
# Executes the given block for each vertex. It allows for mixing Enumerable in.
|
249
|
+
def each(&block)
|
250
|
+
vertices.each(&block)
|
251
|
+
end
|
252
|
+
|
253
|
+
# Returns true if the specified vertex belongs to the graph.
|
254
|
+
#
|
255
|
+
# This is a default implementation that is of O(n) average complexity.
|
256
|
+
# If a subclass uses a hash to store vertices, then this can be
|
257
|
+
# made into an O(1) average complexity operation.
|
258
|
+
#
|
259
|
+
# @param [vertex] v
|
260
|
+
# @return [Boolean]
|
261
|
+
def vertex?(v)
|
262
|
+
vertices.include?(v)
|
263
|
+
end
|
264
|
+
alias has_vertex? vertex?
|
265
|
+
# TODO: (has_)vertices?
|
266
|
+
|
267
|
+
# Returns true if u or (u,v) is an {Edge edge} of the graph.
|
268
|
+
#
|
269
|
+
# @overload edge?(a)
|
270
|
+
# @param [Arc, Edge] a
|
271
|
+
# @overload edge?(u, v)
|
272
|
+
# @param [vertex] u
|
273
|
+
# @param [vertex] v
|
274
|
+
# @return [Boolean]
|
275
|
+
def edge?(*args)
|
276
|
+
edges.include?(edge_convert(*args))
|
277
|
+
end
|
278
|
+
alias arc? edge?
|
279
|
+
alias has_edge? edge?
|
280
|
+
alias has_arc? edge?
|
281
|
+
|
282
|
+
# Tests two objects to see if they are adjacent.
|
283
|
+
#
|
284
|
+
# Note that in this method, one is primarily concerned with finding
|
285
|
+
# all adjacent objects in a graph to a given object. The concern is primarily on seeing
|
286
|
+
# if two objects touch. For two vertexes, any edge between the two will usually do, but
|
287
|
+
# the direction can be specified if needed.
|
288
|
+
#
|
289
|
+
# @param [vertex] source
|
290
|
+
# @param [vertex] target
|
291
|
+
# @param [Symbol] direction (:all) constraint on the direction of adjacency; may be either `:in`, `:out` or `:all`
|
292
|
+
def adjacent?(source, target, direction = :all)
|
293
|
+
if source.is_a? Graphy::Arc
|
294
|
+
raise NoArcError unless edge? source
|
295
|
+
if target.is_a? Graphy::Arc
|
296
|
+
raise NoArcError unless edge? target
|
297
|
+
(direction != :out and source.source == target.target) or (direction != :in and source.target == target.source)
|
298
|
+
else
|
299
|
+
raise NoVertexError unless vertex? target
|
300
|
+
(direction != :out and source.source == target) or (direction != :in and source.target == target)
|
301
|
+
end
|
302
|
+
else
|
303
|
+
raise NoVertexError unless vertex? source
|
304
|
+
if target.is_a? Graphy::Arc
|
305
|
+
raise NoArcError unless edge? target
|
306
|
+
(direction != :out and source == target.target) or (direction != :in and source == target.source)
|
307
|
+
else
|
308
|
+
raise NoVertexError unless vertex? target
|
309
|
+
(direction != :out and edge?(target,source)) or (direction != :in and edge?(source,target))
|
310
|
+
end
|
311
|
+
end
|
312
|
+
end
|
313
|
+
|
314
|
+
# Is the graph connected?
|
315
|
+
#
|
316
|
+
# A graph is called connected if every pair of distinct vertices in the graph
|
317
|
+
# can be connected through some path. The exact definition depends on whether
|
318
|
+
# the graph is directed or not, hence this method should overriden in specific
|
319
|
+
# implementations.
|
320
|
+
#
|
321
|
+
# This methods implements a lazy routine using the internal vertices hash.
|
322
|
+
# If you ever want to check connectivity state using a bfs/dfs algorithm, use
|
323
|
+
# the `:algo => :bfs` or `:dfs` option.
|
324
|
+
#
|
325
|
+
# @return [Boolean] `true` if the graph is connected, `false` otherwise
|
326
|
+
def connected?(options = {})
|
327
|
+
options = options.reverse_merge! :algo => :bfs
|
328
|
+
if options[:algo] == (:bfs || :dfs)
|
329
|
+
num_nodes = 0
|
330
|
+
send(options[:algo]) { |n| num_nodes += 1 }
|
331
|
+
return num_nodes == @vertex_dict.size
|
332
|
+
else
|
333
|
+
!@vertex_dict.collect { |v| degree(v) > 0 }.any? { |check| check == false }
|
334
|
+
end
|
335
|
+
end
|
336
|
+
# TODO: do it!
|
337
|
+
# TODO: for directed graphs, add weakly_connected? and strongly_connected? (aliased as strong?)
|
338
|
+
# TODO: in the context of vertices/Arc, add connected_vertices? and disconnected_vertices?
|
339
|
+
# TODO: maybe implement some routine which would compute cuts and connectivity? tricky though,
|
340
|
+
# but would be useful (k_connected?(k))
|
341
|
+
|
342
|
+
# Returns true if the graph has no vertex.
|
343
|
+
#
|
344
|
+
# @return [Boolean]
|
345
|
+
def empty?
|
346
|
+
puts "yan"
|
347
|
+
vertices.size.zero?
|
348
|
+
end
|
349
|
+
|
350
|
+
# Returns true if the given object is a vertex or an {Arc arc} of the graph.
|
351
|
+
#
|
352
|
+
# @param [vertex, Arc] x
|
353
|
+
def include?(x)
|
354
|
+
x.is_a?(Graphy::Arc) ? edge?(x) : vertex?(x)
|
355
|
+
end
|
356
|
+
alias has? include?
|
357
|
+
|
358
|
+
# Returns the neighborhood of the given vertex or {Arc arc}.
|
359
|
+
#
|
360
|
+
# This is equivalent to {GraphBuilder#adjacent adjacent}, but the type is based on the
|
361
|
+
# type of the specified object.
|
362
|
+
#
|
363
|
+
# @param [vertex, Arc] x
|
364
|
+
# @param [Symbol] direction (:all) can be either `:all`, `:in` or `:out`
|
365
|
+
def neighborhood(x, direction = :all)
|
366
|
+
adjacent(x, :direction => direction, :type => ((x.is_a? Graphy::Arc) ? :edges : :vertices ))
|
367
|
+
end
|
368
|
+
|
369
|
+
# Union of all neighborhoods of vertices (or edges) in the Enumerable x minus the contents of x.
|
370
|
+
#
|
371
|
+
# Definition taken from: Jorgen Bang-Jensen, Gregory Gutin, *Digraphs: Theory, Algorithms and Applications*, pg. 4
|
372
|
+
#
|
373
|
+
# @param [vertex] x
|
374
|
+
# @param [Symbol] direction can be either `:all`, `:in` or `:out`
|
375
|
+
def set_neighborhood(x, direction = :all)
|
376
|
+
x.inject(Set.new) { |a,v| a.merge(neighborhood(v, idirection))}.reject { |v2| x.include?(v2) }
|
377
|
+
end
|
378
|
+
|
379
|
+
# Union of all {GraphBuilder#set_neighborhood set_neighborhoods} reachable
|
380
|
+
# among the specified edges.
|
381
|
+
#
|
382
|
+
# Definition taken from Jorgen Bang-Jensen, Gregory Gutin, *Digraphs:
|
383
|
+
# Theory, Algorithms and Applications*, pg. 46
|
384
|
+
#
|
385
|
+
# @param [vertex] w
|
386
|
+
# @param [Edges] p
|
387
|
+
# @param [Symbol] direction can be `:all`, `:in`, or `:out`
|
388
|
+
def closed_pth_neighborhood(w, p, direction = :all)
|
389
|
+
if p <= 0
|
390
|
+
w
|
391
|
+
elsif p == 1
|
392
|
+
(w + set_neighborhood(w, direction)).uniq
|
393
|
+
else
|
394
|
+
n = set_neighborhood(w, direction)
|
395
|
+
(w + n + closed_pth_neighborhood(n, p-1, direction)).uniq
|
396
|
+
end
|
397
|
+
end
|
398
|
+
|
399
|
+
# Returns the neighboorhoods reachable in a certain amount of steps from
|
400
|
+
# every vertex (or edge) in the specified Enumerable.
|
401
|
+
#
|
402
|
+
# Definition taken from Jorgen Bang-Jensen, Gregory Gutin, _Digraphs:
|
403
|
+
# Theory, Algorithms and Applications_, pg. 46
|
404
|
+
#
|
405
|
+
# @param [Enumerable] x
|
406
|
+
# @param [Integer] p number of steps to perform
|
407
|
+
# @param [Symbol] direction can be `:all`, `:in`, or `:out`
|
408
|
+
def open_pth_neighborhood(x, p, direction = :all)
|
409
|
+
if p <= 0
|
410
|
+
x
|
411
|
+
elsif p == 1
|
412
|
+
set_neighborhood(x,direction)
|
413
|
+
else
|
414
|
+
set_neighborhood(open_pth_neighborhood(x, p-1, direction), direction) -
|
415
|
+
closed_pth_neighborhood(x, p-1, direction)
|
416
|
+
end
|
417
|
+
end
|
418
|
+
|
419
|
+
# Returns the number of out-edges (for directed graphs) or the number of
|
420
|
+
# incident edges (for undirected graphs) of the specified vertex.
|
421
|
+
#
|
422
|
+
# @param [vertex] v
|
423
|
+
# @return [Integer] number of matching edges
|
424
|
+
def out_degree(v)
|
425
|
+
adjacent(v, :direction => :out).size
|
426
|
+
end
|
427
|
+
|
428
|
+
# Returns the number of in-edges (for directed graphs) or the number of
|
429
|
+
# incident edges (for undirected graphs) of the specified vertex
|
430
|
+
#
|
431
|
+
# @param [vertex] v
|
432
|
+
# @return [Integer] number of matching edges
|
433
|
+
def in_degree(v)
|
434
|
+
adjacent(v, :direction => :in).size
|
435
|
+
end
|
436
|
+
|
437
|
+
# Returns the sum of the number in and out edges for the specified vertex.
|
438
|
+
#
|
439
|
+
# @param [vertex] v
|
440
|
+
# @return [Integer] degree
|
441
|
+
def degree(v)
|
442
|
+
in_degree(v) + out_degree(v)
|
443
|
+
end
|
444
|
+
|
445
|
+
# Minimum in-degree of the graph.
|
446
|
+
#
|
447
|
+
# @return [Integer, nil] returns `nil` if the graph is empty
|
448
|
+
def min_in_degree
|
449
|
+
return nil if to_a.empty?
|
450
|
+
to_a.map { |v| in_degree(v) }.min
|
451
|
+
end
|
452
|
+
|
453
|
+
# Minimum out-degree of the graph.
|
454
|
+
#
|
455
|
+
# @return [Integer, nil] returns `nil` if the graph is empty
|
456
|
+
def min_out_degree
|
457
|
+
return nil if to_a.empty?
|
458
|
+
to_a.map {|v| out_degree(v)}.min
|
459
|
+
end
|
460
|
+
|
461
|
+
# Minimum degree of all vertexes of the graph.
|
462
|
+
#
|
463
|
+
# @return [Integer] `min` between {GraphBuilder#min_in_degree min_in_degree}
|
464
|
+
# and {GraphBuilder#min_out_degree max_out_degree}
|
465
|
+
def min_degree
|
466
|
+
[min_in_degree, min_out_degree].min
|
467
|
+
end
|
468
|
+
|
469
|
+
# Maximum in-degree of the graph.
|
470
|
+
#
|
471
|
+
# @return [Integer, nil] returns `nil` if the graph is empty
|
472
|
+
def max_in_degree
|
473
|
+
return nil if to_a.empty?
|
474
|
+
vertices.map { |v| in_degree(v)}.max
|
475
|
+
end
|
476
|
+
|
477
|
+
# Maximum out-degree of the graph.
|
478
|
+
#
|
479
|
+
# @return [Integer, nil] returns nil if the graph is empty
|
480
|
+
def max_out_degree
|
481
|
+
return nil if to_a.empty?
|
482
|
+
vertices.map { |v| out_degree(v)}.max
|
483
|
+
end
|
484
|
+
|
485
|
+
# Maximum degree of all vertexes of the graph.
|
486
|
+
#
|
487
|
+
# @return [Integer] `max` between {GraphBuilder#max_in_degree max_in_degree}
|
488
|
+
# and {GraphBuilder#max_out_degree max_out_degree}
|
489
|
+
def max_degree
|
490
|
+
[max_in_degree, max_out_degree].max
|
491
|
+
end
|
492
|
+
|
493
|
+
# Is the graph regular, that is are its min degree and max degree equal?
|
494
|
+
#
|
495
|
+
# @return [Boolean]
|
496
|
+
def regular?
|
497
|
+
min_degree == max_degree
|
498
|
+
end
|
499
|
+
|
500
|
+
# Number of vertices.
|
501
|
+
#
|
502
|
+
# @return [Integer]
|
503
|
+
def size
|
504
|
+
vertices.size
|
505
|
+
end
|
506
|
+
alias num_vertices size
|
507
|
+
alias number_of_vertices size
|
508
|
+
|
509
|
+
# Number of vertices.
|
510
|
+
#
|
511
|
+
# @return [Integer]
|
512
|
+
def num_vertices
|
513
|
+
vertices.size
|
514
|
+
end
|
515
|
+
alias number_of_vertices num_vertices
|
516
|
+
|
517
|
+
# Number of edges.
|
518
|
+
#
|
519
|
+
# @return [Integer]
|
520
|
+
def num_edges
|
521
|
+
edges.size
|
522
|
+
end
|
523
|
+
alias number_of_edges num_edges
|
524
|
+
|
525
|
+
# Utility method to show a string representation of the edges of the graph.
|
526
|
+
#def to_s
|
527
|
+
#edges.to_s
|
528
|
+
#end
|
529
|
+
|
530
|
+
# Equality is defined to be same set of edges and directed?
|
531
|
+
def eql?(g)
|
532
|
+
return false unless g.is_a? Graphy::Graph
|
533
|
+
|
534
|
+
(g.directed? == self.directed?) and
|
535
|
+
(vertices.sort == g.vertices.sort) and
|
536
|
+
(g.edges.sort == edges.sort)
|
537
|
+
end
|
538
|
+
alias == eql?
|
539
|
+
|
540
|
+
# Merges another graph into the receiver.
|
541
|
+
#
|
542
|
+
# @param [Graph] other the graph to merge in
|
543
|
+
# @return [Graph] `self`
|
544
|
+
def merge(other)
|
545
|
+
other.vertices.each { |v| add_vertex!(v) }
|
546
|
+
other.edges.each { |e| add_edge!(e) }
|
547
|
+
other.edges.each { |e| add_edge!(e.reverse) } if directed? and !other.directed?
|
548
|
+
self
|
549
|
+
end
|
550
|
+
|
551
|
+
# A synonym for {GraphBuilder#merge merge}, but doesn't modify the current graph.
|
552
|
+
#
|
553
|
+
# @param [Graph, Arc] other
|
554
|
+
# @return [Graph] a new graph
|
555
|
+
def +(other)
|
556
|
+
result = self.class.new(self)
|
557
|
+
case other
|
558
|
+
when Graphy::Graph
|
559
|
+
result.merge(other)
|
560
|
+
when Graphy::Arc
|
561
|
+
result.add_edge!(other)
|
562
|
+
else
|
563
|
+
result.add_vertex!(other)
|
564
|
+
end
|
565
|
+
end
|
566
|
+
|
567
|
+
# Removes all vertices in the specified graph.
|
568
|
+
#
|
569
|
+
# @param [Graph, Arc] other
|
570
|
+
# @return [Graph]
|
571
|
+
def -(other)
|
572
|
+
case other
|
573
|
+
when Graphy::Graph
|
574
|
+
induced_subgraph(vertices - other.vertices)
|
575
|
+
when Graphy::Arc
|
576
|
+
self.class.new(self).remove_edge!(other)
|
577
|
+
else
|
578
|
+
self.class.new(self).remove_vertex!(other)
|
579
|
+
end
|
580
|
+
end
|
581
|
+
|
582
|
+
# A synonym for {AdjacencyGraphBuilder#add_edge! add_edge!}.
|
583
|
+
def <<(edge)
|
584
|
+
add_edge!(edge)
|
585
|
+
end
|
586
|
+
|
587
|
+
# Computes the complement of the current graph.
|
588
|
+
#
|
589
|
+
# @return [Graph]
|
590
|
+
def complement
|
591
|
+
vertices.inject(self.class.new) do |a,v|
|
592
|
+
a.add_vertex!(v)
|
593
|
+
vertices.each { |v2| a.add_edge!(v, v2) unless edge?(v, v2) }; a
|
594
|
+
end
|
595
|
+
end
|
596
|
+
|
597
|
+
# Given an array of vertices, computes the induced subgraph.
|
598
|
+
#
|
599
|
+
# @param [Array(vertex)] v
|
600
|
+
# @return [Graph]
|
601
|
+
def induced_subgraph(v)
|
602
|
+
edges.inject(self.class.new) do |a,e|
|
603
|
+
(v.include?(e.source) and v.include?(e.target)) ? (a << e) : a
|
604
|
+
end
|
605
|
+
end
|
606
|
+
|
607
|
+
#def inspect
|
608
|
+
## FIXME: broken, it's not updated. The issue's not with inspect, but it's worth mentionning here.
|
609
|
+
## Example:
|
610
|
+
## dg = Digraph[1,2, 2,3, 2,4, 4,5, 6,4, 1,6]
|
611
|
+
## dg.add_vertices! 1, 5, "yosh"
|
612
|
+
## # => Graphy::Digraph[Graphy::Arc[1,2,nil], Graphy::Arc[1,6,nil], Graphy::Arc[2,3,nil], Graphy::Arc[2,4,nil], Graphy::Arc[4,5,nil], Graphy::Arc[6,4,nil]]
|
613
|
+
## dg.vertex?("yosh")
|
614
|
+
## # => true
|
615
|
+
## dg
|
616
|
+
## # =>Graphy::Digraph[Graphy::Arc[1,2,nil], Graphy::Arc[1,6,nil], Graphy::Arc[2,3,nil], Graphy::Arc[2,4,nil], Graphy::Arc[4,5,nil], Graphy::Arc[6,4,nil]]
|
617
|
+
## the new vertex doesn't show up.
|
618
|
+
## Actually this version of inspect is far too verbose IMO :)
|
619
|
+
#l = vertices.select { |v| self[v]}.map { |u| "vertex_label_set(#{u.inspect}, #{self[u].inspect})"}.join('.')
|
620
|
+
#self.class.to_s + '[' + edges.map {|e| e.inspect}.join(', ') + ']' + (l && l != '' ? '.'+l : '')
|
621
|
+
#end
|
622
|
+
|
623
|
+
private
|
624
|
+
|
625
|
+
# ?
|
626
|
+
def edge_convert(*args)
|
627
|
+
args[0].is_a?(Graphy::Arc) ? args[0] : edge_class[*args]
|
628
|
+
end
|
629
|
+
|
630
|
+
end # Graph
|
631
|
+
end # Graphy
|