iqvoc 4.0.2 → 4.0.3

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Files changed (75) hide show
  1. data/CHANGELOG.md +6 -0
  2. data/Gemfile.lock +43 -47
  3. data/app/assets/javascripts/framework.js +1 -1
  4. data/app/assets/javascripts/iqvoc/extract_concepts.js +19 -0
  5. data/app/assets/javascripts/iqvoc/iqvoc.js +8 -12
  6. data/app/assets/javascripts/iqvoc/manifest.js +3 -0
  7. data/app/assets/javascripts/iqvoc/onebox.js +44 -0
  8. data/app/assets/javascripts/iqvoc/quicksearch.js +41 -0
  9. data/app/assets/stylesheets/framework.css +1 -1
  10. data/app/assets/stylesheets/iqvoc/bootstrap_extensions.css.scss +0 -7
  11. data/app/assets/stylesheets/iqvoc/components.css.scss +27 -1
  12. data/app/assets/stylesheets/iqvoc/manifest.css +0 -1
  13. data/app/controllers/application_controller.rb +1 -1
  14. data/app/controllers/concepts/alphabetical_controller.rb +5 -1
  15. data/app/controllers/concepts/untranslated_controller.rb +1 -1
  16. data/app/controllers/concepts_controller.rb +2 -0
  17. data/app/controllers/frontpage_controller.rb +23 -0
  18. data/app/controllers/instance_configuration_controller.rb +10 -2
  19. data/app/controllers/pages_controller.rb +21 -0
  20. data/app/controllers/rdf_controller.rb +0 -21
  21. data/app/helpers/concepts_helper.rb +1 -1
  22. data/app/helpers/navigation_helper.rb +0 -10
  23. data/app/helpers/rdf_helper.rb +1 -1
  24. data/app/models/concept/base.rb +2 -2
  25. data/app/models/concept/skos/base.rb +1 -1
  26. data/app/models/label/base.rb +5 -2
  27. data/app/models/labeling/base.rb +2 -2
  28. data/app/models/labeling/skos/base.rb +1 -1
  29. data/app/models/note/base.rb +0 -6
  30. data/app/models/note/skos/base.rb +20 -8
  31. data/app/views/concepts/alphabetical/index.html.erb +2 -2
  32. data/app/views/{rdf/show_concept.iqrdf → concepts/show.iqrdf} +1 -1
  33. data/app/views/concepts/show_published.html.erb +0 -1
  34. data/app/views/concepts/show_unpublished.html.erb +0 -1
  35. data/app/views/concepts/sidebars/_plural.html.erb +3 -3
  36. data/app/views/concepts/sidebars/_singular.html.erb +4 -5
  37. data/app/views/concepts/untranslated/index.html.erb +1 -1
  38. data/app/views/frontpage/index.html.erb +8 -0
  39. data/app/views/instance_configuration/index.html.erb +8 -5
  40. data/app/views/layouts/_navigation.html.erb +10 -8
  41. data/app/views/layouts/application.html.erb +3 -1
  42. data/app/views/pages/help.html.erb +75 -0
  43. data/app/views/partials/labeling/skos/_base.html.erb +2 -1
  44. data/config/initializers/language.rb +1 -1
  45. data/config/locales/de.yml +8 -0
  46. data/config/locales/en.yml +8 -0
  47. data/config/routes.rb +8 -6
  48. data/lib/generators/app/template.rb +1 -1
  49. data/lib/iqvoc/ability.rb +3 -0
  50. data/lib/iqvoc/configuration/collection.rb +2 -2
  51. data/lib/iqvoc/configuration/concept.rb +1 -1
  52. data/lib/iqvoc/configuration/core.rb +6 -4
  53. data/lib/iqvoc/configuration/label.rb +2 -2
  54. data/lib/iqvoc/controller_extensions.rb +1 -1
  55. data/lib/iqvoc/environments/development.rb +6 -0
  56. data/lib/iqvoc/environments/production.rb +6 -0
  57. data/lib/iqvoc/environments/test.rb +6 -0
  58. data/lib/iqvoc/instance_configuration.rb +3 -2
  59. data/lib/iqvoc/skos_importer.rb +23 -0
  60. data/lib/iqvoc/version.rb +1 -1
  61. data/lib/tasks/importer.rake +2 -2
  62. data/test/integration/alphabetical_test.rb +2 -2
  63. data/test/integration/browse_concepts_and_labels_test.rb +4 -4
  64. data/test/integration/untranslated_test.rb +3 -3
  65. data/test/unit/hygiene_test.rb +4 -0
  66. data/test/unit/instance_configuration_test.rb +17 -1
  67. data/test/unit/skos_import_test.rb +19 -0
  68. data/vendor/assets/images/jquery-ui/ui-icons_469bdd_256x240.png +0 -0
  69. data/vendor/assets/javascripts/{jquery-ui-1.8.20.custom.js → jquery-ui-1.8.23.custom.js} +124 -69
  70. data/vendor/assets/stylesheets/{jquery-ui-1.8.20.custom.css → jquery-ui-1.8.23.custom.css} +5 -7
  71. metadata +34 -31
  72. data/app/assets/javascripts/iqvoc/visualization.js +0 -321
  73. data/app/views/concepts/_visualization.html.erb +0 -11
  74. data/vendor/assets/javascripts/excanvas.js +0 -35
  75. data/vendor/assets/javascripts/jit_rgraph.js +0 -153
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-
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- /*
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- Copyright (c) 2011 Sencha Inc. - Author: Nicolas Garcia Belmonte (http://philogb.github.com/)
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-
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- Permission is hereby granted, free of charge, to any person obtaining a copy
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- of this software and associated documentation files (the "Software"), to deal
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- in the Software without restriction, including without limitation the rights
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- to use, copy, modify, merge, publish, distribute, sublicense, and/or sell
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- copies of the Software, and to permit persons to whom the Software is
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- furnished to do so, subject to the following conditions:
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-
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- The above copyright notice and this permission notice shall be included in
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- all copies or substantial portions of the Software.
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-
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- THE SOFTWARE IS PROVIDED "AS IS", WITHOUT WARRANTY OF ANY KIND, EXPRESS OR
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- IMPLIED, INCLUDING BUT NOT LIMITED TO THE WARRANTIES OF MERCHANTABILITY,
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- FITNESS FOR A PARTICULAR PURPOSE AND NONINFRINGEMENT. IN NO EVENT SHALL THE
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- AUTHORS OR COPYRIGHT HOLDERS BE LIABLE FOR ANY CLAIM, DAMAGES OR OTHER
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- LIABILITY, WHETHER IN AN ACTION OF CONTRACT, TORT OR OTHERWISE, ARISING FROM,
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- OUT OF OR IN CONNECTION WITH THE SOFTWARE OR THE USE OR OTHER DEALINGS IN
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- THE SOFTWARE.
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-
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- */
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-
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- b,!0)))this.config.onMouseLeave(this.viz.graph.getNode(e.id),c,d),this.hovered=!1;else{a=d.relatedTarget;for(b=this.canvas.getElement();a&&a.parentNode;){if(b==a.parentNode)return;a=a.parentNode}if(this.hovered)this.config.onMouseLeave(this.hovered,c,d),this.hovered=!1}},onMouseOver:function(a,b,c){var d=f.event.get(a,b),e;if(this.dom&&(e=this.isLabel(a,b,!0)))this.hovered=this.viz.graph.getNode(e.id),this.config.onMouseEnter(this.hovered,c,d)},onMouseMove:function(a,b,c){a=f.event.get(a,b);if(this.pressed)this.moved=
52
- !0,this.config.onDragMove(this.pressed,c,a);else if(this.dom)this.config.onMouseMove(this.hovered,c,a);else{if(this.hovered){var b=this.hovered,d=b.nodeFrom?this.etypes[b.getData("type")]:this.ntypes[b.getData("type")];if(d&&d.contains&&d.contains.call(this.fx,b,c.getPos())){this.config.onMouseMove(b,c,a);return}else this.config.onMouseLeave(b,c,a),this.hovered=!1}if(this.hovered=c.getNode()||this.config.enableForEdges&&c.getEdge())this.config.onMouseEnter(this.hovered,c,a);else this.config.onMouseMove(!1,
53
- c,a)}},onMouseWheel:function(a,b,c){this.config.onMouseWheel(c,f.event.get(a,b))},onMouseDown:function(a,b,c){var d=f.event.get(a,b);if(this.dom){if(a=this.isLabel(a,b))this.pressed=this.viz.graph.getNode(a.id)}else this.pressed=c.getNode()||this.config.enableForEdges&&c.getEdge();this.pressed&&this.config.onDragStart(this.pressed,c,d)},onTouchStart:function(a,b,c){var d=f.event.get(a,b),e;(this.touched=this.dom&&(e=this.isLabel(a,b))?this.viz.graph.getNode(e.id):c.getNode()||this.config.enableForEdges&&
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- c.getEdge())&&this.config.onTouchStart(this.touched,c,d)},onTouchMove:function(a,b,c){a=f.event.get(a,b);if(this.touched)this.touchMoved=!0,this.config.onTouchMove(this.touched,c,a)},onTouchEnd:function(a,b,c){a=f.event.get(a,b);if(this.touched){if(this.touchMoved)this.config.onTouchEnd(this.touched,c,a);else this.config.onTouchCancel(this.touched,c,a);this.touched=this.touchMoved=!1}}});w.Classes.Tips=new i({Implements:[r,y],initializePost:function(){if(document.body){var a=f("_tooltip")||document.createElement("div");
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57
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- a*this.scaleOffsetX;this.translateOffsetY+=b*this.scaleOffsetY;for(var h=0,f=this.canvases.length;h<f;h++)this.canvases[h].translate(a,b,c)},scale:function(a,b){var c=this.scaleOffsetX*a,h=this.scaleOffsetY*b,f=this.translateOffsetX*(a-1)/c,j=this.translateOffsetY*(b-1)/h;this.scaleOffsetX=c;this.scaleOffsetY=h;c=0;for(h=this.canvases.length;c<h;c++)this.canvases[c].scale(a,b,!0);this.translate(f,j,!1)},getPos:function(a){if(a||!this.pos)return this.pos=f.getPos(this.getElement());return this.pos},
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- j=a.length;h<j;h++)this.setLabelData(c,l[h],a[h])},removeLabelData:function(){c.call(this,"label",Array.prototype.slice.call(arguments))}}})();k.Node=new i({initialize:function(a,b,c,d,e){b={id:"",name:"",data:{},startData:{},endData:{},adjacencies:{},selected:!1,drawn:!1,exist:!1,angleSpan:{begin:0,end:0},pos:new b,startPos:new b,endPos:new b};f.extend(this,f.extend(b,a));this.Config=this.Node=c;this.Edge=d;this.Label=e},adjacentTo:function(a){return a.id in this.adjacencies},getAdjacency:function(a){return this.adjacencies[a]},
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- function(a){return a[b]}:b;this.eachSubnode(a,function(a){e(a)&&(d=!0)},c);return d},getSubnodes:function(a,b,c){var d=[],b=b||0,e;f.type(b)=="array"?(e=b[0],b=b[1]):(e=b,b=Number.MAX_VALUE-a._depth);this.eachLevel(a,e,b,function(a){d.push(a)},c);return d},getParents:function(a){var b=[];this.eachAdjacency(a,function(c){c=c.nodeTo;c._depth<a._depth&&b.push(c)});return b},isDescendantOf:function(a,b){if(a.id==b)return!0;for(var c=this.getParents(a),d=!1,e=0;!d&&e<c.length;e++)d=d||this.isDescendantOf(c[e],
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- b);return d},clean:function(a){this.eachNode(a,function(a){a._flag=!1})},getClosestNodeToOrigin:function(a,b,c){return this.getClosestNodeToPos(a,q.KER,b,c)},getClosestNodeToPos:function(a,b,c,d){var e=null,c=c||"current",b=b&&b.getc(!0)||m.KER,g=function(a,b){var c=a.x-b.x,d=a.y-b.y;return c*c+d*d};this.eachNode(a,function(a){e=e==null||g(a.getPos(c).getc(!0),b)<g(e.getPos(c).getc(!0),b)?a:e},d);return e}};f.each(["get","getNode","each","eachNode","computeLevels","eachBFS","clean","getClosestNodeToPos",
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- "getClosestNodeToOrigin"],function(a){k.prototype[a]=function(){return k.Util[a].apply(k.Util,[this].concat(Array.prototype.slice.call(arguments)))}});f.each(["eachAdjacency","eachLevel","eachSubgraph","eachSubnode","anySubnode","getSubnodes","getParents","isDescendantOf"],function(a){k.Node.prototype[a]=function(){return k.Util[a].apply(k.Util,[this].concat(Array.prototype.slice.call(arguments)))}});k.Op={options:{type:"nothing",duration:2E3,hideLabels:!0,fps:30},initialize:function(a){this.viz=
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- c.reposition();c.fx.animate(f.merge(d,{modes:["linear"]}))}}));break;case "fade:con":h=this;for(g=0;g<e.length;g++)l=c.graph.getNode(e[g]),l.setData("alpha",0,"end"),l.ignore=!0;c.reposition();c.fx.animate(f.merge(d,{modes:["node-property:alpha","linear"],onComplete:function(){h.removeNode(e,{type:"nothing"});d.onComplete&&d.onComplete()}}));break;case "iter":h=this;c.fx.sequence({condition:function(){return e.length!=0},step:function(){h.removeNode(e.shift(),{type:"nothing"});c.labels.clearLabels()},
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- onComplete:function(){d.onComplete&&d.onComplete()},duration:Math.ceil(d.duration/e.length)});break;default:this.doError()}},removeEdge:function(a,b){var c=this.viz,d=f.merge(this.options,c.controller,b),e=f.type(a[0])=="string"?[a]:a,g,h,l;switch(d.type){case "nothing":for(g=0;g<e.length;g++)c.graph.removeAdjacence(e[g][0],e[g][1]);break;case "replot":this.removeEdge(e,{type:"nothing"});c.refresh(!0);break;case "fade:seq":case "fade":h=this;for(g=0;g<e.length;g++)(l=c.graph.getAdjacence(e[g][0],
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- e[g][1]))&&l.setData("alpha",0,"end");c.fx.animate(f.merge(d,{modes:["edge-property:alpha"],onComplete:function(){h.removeEdge(e,{type:"nothing"});c.reposition();c.fx.animate(f.merge(d,{modes:["linear"]}))}}));break;case "fade:con":h=this;for(g=0;g<e.length;g++)if(l=c.graph.getAdjacence(e[g][0],e[g][1]))l.setData("alpha",0,"end"),l.ignore=!0;c.reposition();c.fx.animate(f.merge(d,{modes:["edge-property:alpha","linear"],onComplete:function(){h.removeEdge(e,{type:"nothing"});d.onComplete&&d.onComplete()}}));
99
- break;case "iter":h=this;c.fx.sequence({condition:function(){return e.length!=0},step:function(){h.removeEdge(e.shift(),{type:"nothing"});c.labels.clearLabels()},onComplete:function(){d.onComplete()},duration:Math.ceil(d.duration/e.length)});break;default:this.doError()}},sum:function(a,b){var c=this.viz,d=f.merge(this.options,c.controller,b),e=c.root,g;c.root=b.id||c.root;switch(d.type){case "nothing":g=c.construct(a);g.eachNode(function(a){a.eachAdjacency(function(a){c.graph.addAdjacence(a.nodeFrom,
100
- a.nodeTo,a.data)})});break;case "replot":c.refresh(!0);this.sum(a,{type:"nothing"});c.refresh(!0);break;case "fade:seq":case "fade":case "fade:con":that=this;g=c.construct(a);var h=!this.preprocessSum(g)?["node-property:alpha"]:["node-property:alpha","edge-property:alpha"];c.reposition();d.type!="fade:con"?c.fx.animate(f.merge(d,{modes:["linear"],onComplete:function(){c.fx.animate(f.merge(d,{modes:h,onComplete:function(){d.onComplete()}}))}})):(c.graph.eachNode(function(a){a.id!=e&&a.pos.isZero()&&
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- (a.pos.set(a.endPos),a.startPos.set(a.endPos))}),c.fx.animate(f.merge(d,{modes:["linear"].concat(h)})));break;default:this.doError()}},morph:function(a,b,c){var c=c||{},d=this.viz,e=f.merge(this.options,d.controller,b),g=d.root,h;d.root=b.id||d.root;switch(e.type){case "nothing":h=d.construct(a);h.eachNode(function(a){var b=d.graph.hasNode(a.id);a.eachAdjacency(function(a){var b=!!d.graph.getAdjacence(a.nodeFrom.id,a.nodeTo.id);d.graph.addAdjacence(a.nodeFrom,a.nodeTo,a.data);if(b){var b=d.graph.getAdjacence(a.nodeFrom.id,
102
- a.nodeTo.id),c;for(c in a.data||{})b.data[c]=a.data[c]}});if(b){var b=d.graph.getNode(a.id),c;for(c in a.data||{})b.data[c]=a.data[c]}});d.graph.eachNode(function(a){a.eachAdjacency(function(a){h.getAdjacence(a.nodeFrom.id,a.nodeTo.id)||d.graph.removeAdjacence(a.nodeFrom.id,a.nodeTo.id)});h.hasNode(a.id)||d.graph.removeNode(a.id)});break;case "replot":d.labels.clearLabels(!0);this.morph(a,{type:"nothing"});d.refresh(!0);d.refresh(!0);break;case "fade:seq":case "fade":case "fade:con":that=this;h=d.construct(a);
103
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104
- (a=d.graph.getAdjacence(b.id,a.id),j=!0,a.setData("alpha",1),a.setData("alpha",1,"start"),a.setData("alpha",0,"end"))}})});var j=this.preprocessSum(h),a=!j?["node-property:alpha"]:["node-property:alpha","edge-property:alpha"];a[0]+="node-property"in c?":"+f.splat(c["node-property"]).join(":"):"";a[1]=(a[1]||"edge-property:alpha")+("edge-property"in c?":"+f.splat(c["edge-property"]).join(":"):"");"label-property"in c&&a.push("label-property:"+f.splat(c["label-property"]).join(":"));d.reposition?d.reposition():
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106
- f.merge(this.options,c.config,b||{},{modes:["node-property:alpha:span","linear"]}),a.collapsed=!0,function e(a){a.eachSubnode(function(a){a.ignore=!0;a.setData("alpha",0,b.type=="animate"?"end":"current");e(a)})}(a),b.type=="animate"?(c.compute("end"),c.rotated&&c.rotate(c.rotated,"none",{property:"end"}),function g(b){b.eachSubnode(function(b){b.setPos(a.getPos("end"),"end");g(b)})}(a),c.fx.animate(b)):b.type=="replot"&&c.refresh()},expand:function(a,b){if("collapsed"in a){var c=this.viz,b=f.merge(this.options,
107
- c.config,b||{},{modes:["node-property:alpha:span","linear"]});delete a.collapsed;(function e(a){a.eachSubnode(function(a){delete a.ignore;a.setData("alpha",1,b.type=="animate"?"end":"current");e(a)})})(a);b.type=="animate"?(c.compute("end"),c.rotated&&c.rotate(c.rotated,"none",{property:"end"}),c.fx.animate(b)):b.type=="replot"&&c.refresh()}},preprocessSum:function(a){var b=this.viz;a.eachNode(function(a){b.graph.hasNode(a.id)||(b.graph.addNode(a),a=b.graph.getNode(a.id),a.setData("alpha",0),a.setData("alpha",
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- 0,"start"),a.setData("alpha",1,"end"))});var c=!1;a.eachNode(function(a){a.eachAdjacency(function(a){var d=b.graph.getNode(a.nodeFrom.id),h=b.graph.getNode(a.nodeTo.id);d.adjacentTo(h)||(a=b.graph.addAdjacence(d,h,a.data),d.startAlpha==d.endAlpha&&h.startAlpha==h.endAlpha&&(c=!0,a.setData("alpha",0),a.setData("alpha",0,"start"),a.setData("alpha",1,"end")))})});return c}};var A={none:{render:f.empty,contains:f.lambda(!1)},circle:{render:function(a,b,c,d){d=d.getCtx();d.beginPath();d.arc(b.x,b.y,c,
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- a.adjacencies,f;for(f in a)this.node(a[f],b,c,d,e,g)},"node-property":function(a,b,c){this.node(a,b,c,"map","getData","setData")},"edge-property":function(a,b,c){this.edge(a,b,c,"map","getData","setData")},"label-property":function(a,b,c){this.node(a,b,c,"label","getLabelData","setLabelData")},"node-style":function(a,b,c){this.node(a,b,c,"canvas","getCanvasStyle","setCanvasStyle")},"edge-style":function(a,b,c){this.edge(a,b,c,"canvas","getCanvasStyle","setCanvasStyle")}},sequence:function(a){var b=
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- this,a=f.merge({condition:f.lambda(!1),step:f.empty,onComplete:f.empty,duration:200},a||{}),c=setInterval(function(){a.condition()?a.step():(clearInterval(c),a.onComplete());b.viz.refresh(!0)},a.duration)},prepare:function(a){var b=this.viz.graph,c={"node-property":{getter:"getData",setter:"setData"},"edge-property":{getter:"getData",setter:"setData"},"node-style":{getter:"getCanvasStyle",setter:"setCanvasStyle"},"edge-style":{getter:"getCanvasStyle",setter:"setCanvasStyle"}},d={};if(f.type(a)=="array")for(var e=
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- 0,g=a.length;e<g;e++){var h=a[e].split(":");d[h.shift()]=h}else for(e in a)e=="position"?d[a.position]=[]:d[e]=f.splat(a[e]);b.eachNode(function(a){a.startPos.set(a.pos);f.each(["node-property","node-style"],function(b){if(b in d)for(var e=d[b],g=0,f=e.length;g<f;g++)a[c[b].setter](e[g],a[c[b].getter](e[g]),"start")});f.each(["edge-property","edge-style"],function(b){if(b in d){var e=d[b];a.eachAdjacency(function(a){for(var d=0,g=e.length;d<g;d++)a[c[b].setter](e[d],a[c[b].getter](e[d]),"start")})}})});
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- return d},animate:function(a,b){var a=f.merge(this.viz.config,a||{}),c=this,d=this.viz.graph,e=this.Interpolator,g=a.type==="nodefx"?this.nodeFxAnimation:this.animation,h=this.prepare(a.modes);a.hideLabels&&this.labels.hideLabels(!0);g.setOptions(f.extend(a,{$animating:!1,compute:function(g){d.eachNode(function(a){for(var c in h)e[c](a,h[c],g,b)});c.plot(a,this.$animating,g);this.$animating=!0},complete:function(){a.hideLabels&&c.labels.hideLabels(!1);c.plot(a);a.onComplete()}})).start()},nodeFx:function(a){var b=
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- this.viz,c=b.graph,d=this.nodeFxAnimation,e=f.merge(this.viz.config,{elements:{id:!1,properties:{}},reposition:!1}),a=f.merge(e,a||{},{onBeforeCompute:f.empty,onAfterCompute:f.empty});d.stopTimer();var g=a.elements.properties;a.elements.id?(d=f.splat(a.elements.id),f.each(d,function(a){if(a=c.getNode(a))for(var b in g)a.setData(b,g[b],"end")})):c.eachNode(function(a){for(var b in g)a.setData(b,g[b],"end")});var d=[],h;for(h in g)d.push(h);h=["node-property:"+d.join(":")];a.reposition&&(h.push("linear"),
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- b.compute("end"));this.animate(f.merge(a,{modes:h,type:"nodefx"}))},plot:function(a,b){var c=this.viz,d=c.graph,e=c.canvas,c=c.root,g=this;e.getCtx();a=a||this.viz.controller;a.clearCanvas&&e.clear();if(c=d.getNode(c)){var f=!!c.visited;d.eachNode(function(c){var d=c.getData("alpha");c.eachAdjacency(function(d){var j=d.nodeTo;!!j.visited===f&&c.drawn&&j.drawn&&(!b&&a.onBeforePlotLine(d),g.plotLine(d,e,b),!b&&a.onAfterPlotLine(d))});c.drawn&&(!b&&a.onBeforePlotNode(c),g.plotNode(c,e,b),!b&&a.onAfterPlotNode(c));
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- !g.labelsHidden&&a.withLabels&&(c.drawn&&d>=0.95?g.labels.plotLabel(e,c,a):g.labels.hideLabel(c,!1));c.visited=!f})}},plotTree:function(a,b,c){var d=this,e=this.viz.canvas;e.getCtx();var g=a.getData("alpha");a.eachSubnode(function(g){if(b.plotSubtree(a,g)&&g.exist&&g.drawn){var f=a.getAdjacency(g.id);!c&&b.onBeforePlotLine(f);d.plotLine(f,e,c);!c&&b.onAfterPlotLine(f);d.plotTree(g,b,c)}});a.drawn?(!c&&b.onBeforePlotNode(a),this.plotNode(a,e,c),!c&&b.onAfterPlotNode(a),!b.hideLabels&&b.withLabels&&
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- g>=0.95?this.labels.plotLabel(e,a,b):this.labels.hideLabel(a,!1)):this.labels.hideLabel(a,!0)},plotNode:function(a,b,c){var d=a.getData("type"),e=this.node.CanvasStyles;if(d!="none"){var g=a.getData("lineWidth"),f=a.getData("color"),l=a.getData("alpha"),j=b.getCtx();j.save();j.lineWidth=g;j.fillStyle=j.strokeStyle=f;j.globalAlpha=l;for(var i in e)j[i]=a.getCanvasStyle(i);this.nodeTypes[d].render.call(this,a,b,c);j.restore()}},plotLine:function(a,b,c){var d=a.getData("type"),e=this.edge.CanvasStyles;
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- if(d!="none"){var g=a.getData("lineWidth"),f=a.getData("color"),l=b.getCtx(),j=a.nodeFrom,i=a.nodeTo;l.save();l.lineWidth=g;l.fillStyle=l.strokeStyle=f;l.globalAlpha=Math.min(j.getData("alpha"),i.getData("alpha"),a.getData("alpha"));for(var k in e)l[k]=a.getCanvasStyle(k);this.edgeTypes[d].render.call(this,a,b,c);l.restore()}}};k.Plot3D=f.merge(k.Plot,{Interpolator:{linear:function(a,b,c){var b=a.startPos.getc(!0),d=a.endPos.getc(!0);a.pos.setc(this.compute(b.x,d.x,c),this.compute(b.y,d.y,c),this.compute(b.z,
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- d.z,c))}},plotNode:function(a,b){a.getData("type")!="none"&&this.plotElement(a,b,{getAlpha:function(){return a.getData("alpha")}})},plotLine:function(a,b){a.getData("type")!="none"&&this.plotElement(a,b,{getAlpha:function(){return Math.min(a.nodeFrom.getData("alpha"),a.nodeTo.getData("alpha"),a.getData("alpha"))}})},plotElement:function(a,b,c){var d=b.getCtx(),e=new Matrix4,g=b.config.Scene.Lighting,h=b.canvases[0],b=h.program,h=h.camera;if(!a.geometry)a.geometry=new (O3D[a.getData("type")]);a.geometry.update(a);
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- if(!a.webGLVertexBuffer){for(var l=[],j=[],i=[],k=0,n=a.geometry,m=0,u=n.vertices,n=n.faces,q=n.length;m<q;m++){var p=n[m],o=u[p.a],s=u[p.b],r=u[p.c],x=p.d?u[p.d]:!1,p=p.normal;l.push(o.x,o.y,o.z);l.push(s.x,s.y,s.z);l.push(r.x,r.y,r.z);x&&l.push(x.x,x.y,x.z);i.push(p.x,p.y,p.z);i.push(p.x,p.y,p.z);i.push(p.x,p.y,p.z);x&&i.push(p.x,p.y,p.z);j.push(k,k+1,k+2);x?(j.push(k,k+2,k+3),k+=4):k+=3}a.webGLVertexBuffer=d.createBuffer();d.bindBuffer(d.ARRAY_BUFFER,a.webGLVertexBuffer);d.bufferData(d.ARRAY_BUFFER,
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- new Float32Array(l),d.STATIC_DRAW);a.webGLFaceBuffer=d.createBuffer();d.bindBuffer(d.ELEMENT_ARRAY_BUFFER,a.webGLFaceBuffer);d.bufferData(d.ELEMENT_ARRAY_BUFFER,new Uint16Array(j),d.STATIC_DRAW);a.webGLFaceCount=j.length;a.webGLNormalBuffer=d.createBuffer();d.bindBuffer(d.ARRAY_BUFFER,a.webGLNormalBuffer);d.bufferData(d.ARRAY_BUFFER,new Float32Array(i),d.STATIC_DRAW)}e.multiply(h.matrix,a.geometry.matrix);d.uniformMatrix4fv(b.viewMatrix,!1,e.flatten());d.uniformMatrix4fv(b.projectionMatrix,!1,h.projectionMatrix.flatten());
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- e=Matrix4.makeInvert(e);e.$transpose();d.uniformMatrix4fv(b.normalMatrix,!1,e.flatten());e=f.hexToRgb(a.getData("color"));e.push(c.getAlpha());d.uniform4f(b.color,e[0]/255,e[1]/255,e[2]/255,e[3]);d.uniform1i(b.enableLighting,g.enable);if(g.enable){if(g.ambient)c=g.ambient,d.uniform3f(b.ambientColor,c[0],c[1],c[2]);if(g.directional)g=g.directional,e=g.color,g=g.direction,g=(new Vector3(g.x,g.y,g.z)).normalize().$scale(-1),d.uniform3f(b.lightingDirection,g.x,g.y,g.z),d.uniform3f(b.directionalColor,
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- e[0],e[1],e[2])}d.bindBuffer(d.ARRAY_BUFFER,a.webGLVertexBuffer);d.vertexAttribPointer(b.position,3,d.FLOAT,!1,0,0);d.bindBuffer(d.ARRAY_BUFFER,a.webGLNormalBuffer);d.vertexAttribPointer(b.normal,3,d.FLOAT,!1,0,0);d.bindBuffer(d.ELEMENT_ARRAY_BUFFER,a.webGLFaceBuffer);d.drawElements(d.TRIANGLES,a.webGLFaceCount,d.UNSIGNED_SHORT,0)}});k.Label={};k.Label.Native=new i({initialize:function(a){this.viz=a},plotLabel:function(a,b,c){var d=a.getCtx();b.pos.getc(!0);d.font=b.getLabelData("style")+" "+b.getLabelData("size")+
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- "px "+b.getLabelData("family");d.textAlign=b.getLabelData("textAlign");d.fillStyle=d.strokeStyle=b.getLabelData("color");d.textBaseline=b.getLabelData("textBaseline");this.renderLabel(a,b,c)},renderLabel:function(a,b){var c=a.getCtx(),d=b.pos.getc(!0);c.fillText(b.name,d.x,d.y+b.getData("height")/2)},hideLabel:f.empty,hideLabels:f.empty});k.Label.DOM=new i({labelsHidden:!1,labelContainer:!1,labels:{},getLabelContainer:function(){return this.labelContainer?this.labelContainer:this.labelContainer=document.getElementById(this.viz.config.labelContainer)},
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- getLabel:function(a){return a in this.labels&&this.labels[a]!=null?this.labels[a]:this.labels[a]=document.getElementById(a)},hideLabels:function(a){this.getLabelContainer().style.display=a?"none":"";this.labelsHidden=a},clearLabels:function(a){for(var b in this.labels)if(a||!this.viz.graph.hasNode(b))this.disposeLabel(b),delete this.labels[b]},disposeLabel:function(a){(a=this.getLabel(a))&&a.parentNode&&a.parentNode.removeChild(a)},hideLabel:function(a,b){var a=f.splat(a),c=b?"":"none",d=this;f.each(a,
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- function(a){if(a=d.getLabel(a.id))a.style.display=c})},fitsInCanvas:function(a,b){var c=b.getSize();if(a.x>=c.width||a.x<0||a.y>=c.height||a.y<0)return!1;return!0}});k.Label.HTML=new i({Implements:k.Label.DOM,plotLabel:function(a,b,c){var a=b.id,d=this.getLabel(a);if(!d&&!(d=document.getElementById(a))){var d=document.createElement("div"),e=this.getLabelContainer();d.id=a;d.className="node";d.style.position="absolute";c.onCreateLabel(d,b);e.appendChild(d);this.labels[b.id]=d}this.placeLabel(d,b,c)}});
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- k.Label.SVG=new i({Implements:k.Label.DOM,plotLabel:function(a,b,c){var a=b.id,d=this.getLabel(a);if(!d&&!(d=document.getElementById(a))){var d=document.createElementNS("http://www.w3.org/2000/svg","svg:text"),e=document.createElementNS("http://www.w3.org/2000/svg","svg:tspan");d.appendChild(e);e=this.getLabelContainer();d.setAttribute("id",a);d.setAttribute("class","node");e.appendChild(d);c.onCreateLabel(d,b);this.labels[b.id]=d}this.placeLabel(d,b,c)}});var r=$jit.Layouts={},F={label:null,compute:function(a,
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- b,c){this.initializeLabel(c);var d=this.label,e=d.style;a.eachNode(function(a){var b=a.getData("autoWidth"),c=a.getData("autoHeight");if(b||c){delete a.data.$width;delete a.data.$height;delete a.data.$dim;var j=a.getData("width"),i=a.getData("height");e.width=b?"auto":j+"px";e.height=c?"auto":i+"px";d.innerHTML=a.name;b=d.offsetWidth;c=d.offsetHeight;j=a.getData("type");f.indexOf(["circle","square","triangle","star"],j)===-1?(a.setData("width",b),a.setData("height",c)):(b=b>c?b:c,a.setData("width",
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- b),a.setData("height",b),a.setData("dim",b))}})},initializeLabel:function(a){if(!this.label)this.label=document.createElement("div"),document.body.appendChild(this.label);this.setLabelStyles(a)},setLabelStyles:function(){f.extend(this.label.style,{visibility:"hidden",position:"absolute",width:"auto",height:"auto"});this.label.className="jit-autoadjust-label"}};r.Radial=new i({compute:function(a){a=f.splat(a||["current","start","end"]);F.compute(this.graph,a,this.config);this.graph.computeLevels(this.root,
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- 0,"ignore");var b=this.createLevelDistanceFunc();this.computeAngularWidths(a);this.computePositions(a,b)},computePositions:function(a,b){for(var c=this.graph,d=c.getNode(this.root),e=this.parent,g=0,f=a.length;g<f;g++){var i=a[g];d.setPos(new q(0,0),i);d.setData("span",Math.PI*2,i)}d.angleSpan={begin:0,end:2*Math.PI};c.eachBFS(this.root,function(c){var d=c.angleSpan.end-c.angleSpan.begin,g=c.angleSpan.begin,f=b(c),h=0,i=[],l={};c.eachSubnode(function(b){h+=b._treeAngularWidth;for(var c=0,d=a.length;c<
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- d;c++){var e=a[c],g=b.getData("dim",e);l[e]=e in l?g>l[e]?g:l[e]:g}i.push(b)},"ignore");e&&e.id==c.id&&i.length>0&&i[0].dist&&i.sort(function(a,b){return(a.dist>=b.dist)-(a.dist<=b.dist)});for(var c=0,k=i.length;c<k;c++){var m=i[c];if(!m._flag){for(var o=m._treeAngularWidth/h*d,s=g+o/2,r=0,w=a.length;r<w;r++){var v=a[r];m.setPos(new q(s,f),v);m.setData("span",o,v);m.setData("dim-quotient",m.getData("dim",v)/l[v],v)}m.angleSpan={begin:g,end:g+o};g+=o}}},"ignore")},setAngularWidthForNodes:function(a){this.graph.eachBFS(this.root,
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- function(b,c){var d=b.getData("angularWidth",a[0])||5;b._angularWidth=d/c},"ignore")},setSubtreesAngularWidth:function(){var a=this;this.graph.eachNode(function(b){a.setSubtreeAngularWidth(b)},"ignore")},setSubtreeAngularWidth:function(a){var b=this,c=a._angularWidth,d=0;a.eachSubnode(function(a){b.setSubtreeAngularWidth(a);d+=a._treeAngularWidth},"ignore");a._treeAngularWidth=Math.max(c,d)},computeAngularWidths:function(a){this.setAngularWidthForNodes(a);this.setSubtreesAngularWidth()}});$jit.RGraph=
141
- new i({Implements:[{construct:function(a){var b=f.type(a)=="array",c=new k(this.graphOptions,this.config.Node,this.config.Edge,this.config.Label);b?function(a,b){for(var c=function(c){for(var g=0,f=b.length;g<f;g++)if(b[g].id==c)return b[g];return a.addNode({id:c,name:c})},h=0,i=b.length;h<i;h++){a.addNode(b[h]);var j=b[h].adjacencies;if(j)for(var k=0,m=j.length;k<m;k++){var n=j[k],o={};if(typeof j[k]!="string")o=f.merge(n.data,{}),n=n.nodeTo;a.addAdjacence(b[h],c(n),o)}}}(c,a):function(a,b){a.addNode(b);
142
- if(b.children)for(var c=0,f=b.children;c<f.length;c++)a.addAdjacence(b,f[c]),arguments.callee(a,f[c])}(c,a);return c},loadJSON:function(a,b){this.json=a;this.labels&&this.labels.clearLabels&&this.labels.clearLabels(!0);this.graph=this.construct(a);this.root=f.type(a)!="array"?a.id:a[b?b:0].id},toJSON:function(a){if((a||"tree")=="tree")var b={},b=function e(a){var b={};b.id=a.id;b.name=a.name;b.data=a.data;var c=[];a.eachSubnode(function(a){c.push(e(a))});b.children=c;return b}(this.graph.getNode(this.root));
143
- else{var b=[],c=!!this.graph.getNode(this.root).visited;this.graph.eachNode(function(a){var g={};g.id=a.id;g.name=a.name;g.data=a.data;var f=[];a.eachAdjacency(function(a){var b=a.nodeTo;if(!!b.visited===c){var e={};e.nodeTo=b.id;e.data=a.data;f.push(e)}});g.adjacencies=f;b.push(g);a.visited=!c})}return b}},w,r.Radial],initialize:function(a){var b=$jit.RGraph,a=this.controller=this.config=f.merge(o("Canvas","Node","Edge","Fx","Controller","Tips","NodeStyles","Events","Navigation","Label"),{interpolation:"linear",
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- levelDistance:100},a);if(a.useCanvas)this.canvas=a.useCanvas,this.config.labelContainer=this.canvas.id+"-label";else{if(a.background)a.background=f.merge({type:"Circles"},a.background);this.canvas=new s(this,a);this.config.labelContainer=(typeof a.injectInto=="string"?a.injectInto:a.injectInto.id)+"-label"}this.graphOptions={klass:q,Node:{selected:!1,exist:!0,drawn:!0}};this.graph=new k(this.graphOptions,this.config.Node,this.config.Edge);this.labels=new b.Label[a.Label.type](this);this.fx=new b.Plot(this,
145
- b);this.op=new b.Op(this);this.root=this.json=null;this.parent=this.busy=!1;this.initializeExtras()},createLevelDistanceFunc:function(){var a=this.config.levelDistance;return function(b){return(b._depth+1)*a}},refresh:function(){this.compute();this.plot()},reposition:function(){this.compute("end")},plot:function(){this.fx.plot()},getNodeAndParentAngle:function(a){var b=!1,c=this.graph.getNode(a),a=c.getParents();if(a=a.length>0?a[0]:!1)b=a.pos.getc(),c=c.pos.getc(),b=b.add(c.scale(-1)),b=Math.atan2(b.y,
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- b.x),b<0&&(b+=2*Math.PI);return{parent:a,theta:b}},tagChildren:function(a,b){if(a.angleSpan){var c=[];a.eachAdjacency(function(a){c.push(a.nodeTo)},"ignore");for(var d=c.length,e=0;e<d&&b!=c[e].id;e++);for(var e=(e+1)%d,g=0;b!=c[e].id;e=(e+1)%d)c[e].dist=g++}},onClick:function(a,b){if(this.root!=a&&!this.busy){this.busy=!0;this.root=a;var c=this;this.controller.onBeforeCompute(this.graph.getNode(a));var d=this.getNodeAndParentAngle(a);this.tagChildren(d.parent,a);this.parent=d.parent;this.compute("end");
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- var e=d.theta-d.parent.endPos.theta;this.graph.eachNode(function(a){a.endPos.set(a.endPos.getp().add(new q(e,0)))});d=this.config.interpolation;b=f.merge({onComplete:f.empty},b||{});this.fx.animate(f.merge({hideLabels:!0,modes:[d]},b,{onComplete:function(){c.busy=!1;b.onComplete()}}))}}});$jit.RGraph.$extend=!0;(function(a){a.Op=new i({Implements:k.Op});a.Plot=new i({Implements:k.Plot});a.Label={};a.Label.Native=new i({Implements:k.Label.Native});a.Label.SVG=new i({Implements:k.Label.SVG,initialize:function(a){this.viz=
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- a},placeLabel:function(a,c,d){var e=c.pos.getc(!0),g=this.viz.canvas,f=g.translateOffsetX,i=g.translateOffsetY,j=g.scaleOffsetX,k=g.scaleOffsetY,g=g.getSize(),e={x:Math.round(e.x*j+f+g.width/2),y:Math.round(e.y*k+i+g.height/2)};a.setAttribute("x",e.x);a.setAttribute("y",e.y);d.onPlaceLabel(a,c)}});a.Label.HTML=new i({Implements:k.Label.HTML,initialize:function(a){this.viz=a},placeLabel:function(a,c,d){var e=c.pos.getc(!0),f=this.viz.canvas,h=f.translateOffsetX,i=f.translateOffsetY,j=f.scaleOffsetX,
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- k=f.scaleOffsetY,m=f.getSize(),e={x:Math.round(e.x*j+h+m.width/2),y:Math.round(e.y*k+i+m.height/2)},h=a.style;h.left=e.x+"px";h.top=e.y+"px";h.display=this.fitsInCanvas(e,f)?"":"none";d.onPlaceLabel(a,c)}});a.Plot.NodeTypes=new i({none:{render:f.empty,contains:f.lambda(!1)},circle:{render:function(a,c){var d=a.pos.getc(!0),e=a.getData("dim");this.nodeHelper.circle.render("fill",d,e,c)},contains:function(a,c){var d=a.pos.getc(!0),e=a.getData("dim");return this.nodeHelper.circle.contains(d,c,e)}},ellipse:{render:function(a,
150
- c){var d=a.pos.getc(!0),e=a.getData("width"),f=a.getData("height");this.nodeHelper.ellipse.render("fill",d,e,f,c)},contains:function(a,c){var d=a.pos.getc(!0),e=a.getData("width"),f=a.getData("height");return this.nodeHelper.ellipse.contains(d,c,e,f)}},square:{render:function(a,c){var d=a.pos.getc(!0),e=a.getData("dim");this.nodeHelper.square.render("fill",d,e,c)},contains:function(a,c){var d=a.pos.getc(!0),e=a.getData("dim");return this.nodeHelper.square.contains(d,c,e)}},rectangle:{render:function(a,
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- c){var d=a.pos.getc(!0),e=a.getData("width"),f=a.getData("height");this.nodeHelper.rectangle.render("fill",d,e,f,c)},contains:function(a,c){var d=a.pos.getc(!0),e=a.getData("width"),f=a.getData("height");return this.nodeHelper.rectangle.contains(d,c,e,f)}},triangle:{render:function(a,c){var d=a.pos.getc(!0),e=a.getData("dim");this.nodeHelper.triangle.render("fill",d,e,c)},contains:function(a,c){var d=a.pos.getc(!0),e=a.getData("dim");return this.nodeHelper.triangle.contains(d,c,e)}},star:{render:function(a,
152
- c){var d=a.pos.getc(!0),e=a.getData("dim");this.nodeHelper.star.render("fill",d,e,c)},contains:function(a,c){var d=a.pos.getc(!0),e=a.getData("dim");return this.nodeHelper.star.contains(d,c,e)}}});a.Plot.EdgeTypes=new i({none:f.empty,line:{render:function(a,c){var d=a.nodeFrom.pos.getc(!0),e=a.nodeTo.pos.getc(!0);this.edgeHelper.line.render(d,e,c)},contains:function(a,c){var d=a.nodeFrom.pos.getc(!0),e=a.nodeTo.pos.getc(!0);return this.edgeHelper.line.contains(d,e,c,this.edge.epsilon)}},arrow:{render:function(a,
153
- c){var d=a.nodeFrom.pos.getc(!0),e=a.nodeTo.pos.getc(!0),f=a.getData("dim"),h=a.data.$direction;this.edgeHelper.arrow.render(d,e,f,h&&h.length>1&&h[0]!=a.nodeFrom.id,c)},contains:function(a,c){var d=a.nodeFrom.pos.getc(!0),e=a.nodeTo.pos.getc(!0);return this.edgeHelper.arrow.contains(d,e,c,this.edge.epsilon)}}})})($jit.RGraph)})();