ipa_test_kit 0.2.0 → 0.3.1

data/lib/ipa_test_kit/generated/v1.0.0/problem_list_item/problem_list_item_provenance_revinclude_search_test.rb

@@ -0,0 +1,51 @@
+require_relative '../../../search_test'
+require_relative '../../../generator/group_metadata'
+
+module IpaTestKit
+  module IpaV100
+    class ProblemListItemProvenanceRevincludeSearchTest < Inferno::Test
+      include IpaTestKit::SearchTest
+
+      title 'Server returns Provenance resources from Condition search by patient + revInclude:Provenance:target'
+      description %(
+        A server SHALL be capable of supporting _revIncludes:Provenance:target.
+
+        This test will perform a search by patient + revInclude:Provenance:target and
+        will pass if a Provenance resource is found in the response.
+      %)
+
+      id :ipa_v100_problem_list_item_provenance_revinclude_search_test
+  
+      input :patient_ids,
+        title: 'Patient IDs',
+        description: 'Comma separated list of patient IDs that in sum contain all MUST SUPPORT elements'
+  
+      def properties
+        @properties ||= SearchTestProperties.new(
+          resource_type: 'Condition',
+        search_param_names: ['patient']
+        )
+      end
+
+      def self.metadata
+        @metadata ||= Generator::GroupMetadata.new(YAML.load_file(File.join(__dir__, 'metadata.yml')))
+      end
+
+      def self.provenance_metadata
+        # @provenance_metadata ||= Generator::GroupMetadata.new(YAML.load_file(File.join(__dir__, '..', 'provenance', 'metadata.yml'), aliases: true))
+      end
+
+      def scratch_resources
+        scratch[:problem_list_item_resources] ||= {}
+      end
+
+      def scratch_provenance_resources
+        scratch[:provenance_resources] ||= {}
+      end
+
+      run do
+        run_provenance_revinclude_search_test
+      end
+    end
+  end
+end

data/lib/ipa_test_kit/generated/v1.0.0/problem_list_item/problem_list_item_read_test.rb

@@ -0,0 +1,26 @@
+require_relative '../../../read_test'
+
+module IpaTestKit
+  module IpaV100
+    class ProblemListItemReadTest < Inferno::Test
+      include IpaTestKit::ReadTest
+
+      title 'Server returns correct Condition resource from Condition read interaction'
+      description 'A server SHALL support the Condition read interaction.'
+
+      id :ipa_v100_problem_list_item_read_test
+
+      def resource_type
+        'Condition'
+      end
+
+      def scratch_resources
+        scratch[:problem_list_item_resources] ||= {}
+      end
+
+      run do
+        perform_read_test(all_scratch_resources)
+      end
+    end
+  end
+end

data/lib/ipa_test_kit/generated/v1.0.0/problem_list_item/problem_list_item_reference_resolution_test.rb

@@ -0,0 +1,42 @@
+require_relative '../../../reference_resolution_test'
+require_relative '../resource_list'
+
+module IpaTestKit
+  module IpaV100
+    class ProblemListItemReferenceResolutionTest < Inferno::Test
+      include IpaTestKit::ReferenceResolutionTest
+      include ResourceList
+
+      title 'MustSupport references within Condition resources are valid'
+      description %(
+        This test will attempt to read external references provided within elements
+        marked as 'MustSupport', if any are available.
+
+        It verifies that at least one external reference for each MustSupport Reference element
+        can be accessed by the test client, and conforms to corresponding IPA profile.
+
+        Elements which may provide external references include:
+
+        * Condition.subject
+      )
+
+      id :ipa_v100_problem_list_item_reference_resolution_test
+
+      def resource_type
+        'Condition'
+      end
+
+      def self.metadata
+        @metadata ||= Generator::GroupMetadata.new(YAML.load_file(File.join(__dir__, 'metadata.yml'), aliases: true))
+      end
+
+      def scratch_resources
+        scratch[:problem_list_item_resources] ||= {}
+      end
+
+      run do
+        perform_reference_resolution_test(scratch_resources[:all])
+      end
+    end
+  end
+end

data/lib/ipa_test_kit/generated/v1.0.0/problem_list_item/problem_list_item_validation_test.rb

@@ -0,0 +1,40 @@
+require_relative '../../../validation_test'
+
+module IpaTestKit
+  module IpaV100
+    class ProblemListItemValidationTest < Inferno::Test
+      include IpaTestKit::ValidationTest
+
+      id :ipa_v100_problem_list_item_validation_test
+      title 'Condition resources returned during previous tests conform to the IPA-problem-list-item'
+      description %(
+This test verifies resources returned from the first search conform to
+the [IPA-problem-list-item](http://hl7.org/fhir/uv/ipa/StructureDefinition/ipa-problem-list-item).
+Systems must demonstrate at least one valid example in order to pass this test.
+
+It verifies the presence of mandatory elements and that elements with
+required bindings contain appropriate values. CodeableConcept element
+bindings will fail if none of their codings have a code/system belonging
+to the bound ValueSet. Quantity, Coding, and code element bindings will
+fail if their code/system are not found in the valueset.
+
+      )
+      output :dar_code_found, :dar_extension_found
+
+      def resource_type
+        'Condition'
+      end
+
+      def scratch_resources
+        scratch[:problem_list_item_resources] ||= {}
+      end
+
+      run do
+        perform_validation_test(scratch_resources[:all] || [],
+                                'http://hl7.org/fhir/uv/ipa/StructureDefinition/ipa-problem-list-item',
+                                '1.0.0',
+                                skip_if_empty: true)
+      end
+    end
+  end
+end

data/lib/ipa_test_kit/generated/v1.0.0/problem_list_item_group.rb

@@ -0,0 +1,100 @@
+require_relative 'problem_list_item/problem_list_item_patient_search_test'
+require_relative 'problem_list_item/problem_list_item_patient_clinical_status_search_test'
+require_relative 'problem_list_item/problem_list_item_patient_category_search_test'
+require_relative 'problem_list_item/problem_list_item_patient_category_clinical_status_search_test'
+require_relative 'problem_list_item/problem_list_item_patient_code_search_test'
+require_relative 'problem_list_item/problem_list_item_patient_onset_date_search_test'
+require_relative 'problem_list_item/problem_list_item_read_test'
+require_relative 'problem_list_item/problem_list_item_provenance_revinclude_search_test'
+require_relative 'problem_list_item/problem_list_item_validation_test'
+require_relative 'problem_list_item/problem_list_item_must_support_test'
+require_relative 'problem_list_item/problem_list_item_reference_resolution_test'
+
+module IpaTestKit
+  module IpaV100
+    class ProblemListItemGroup < Inferno::TestGroup
+      title 'Condition (Problem List Item) Tests'
+      short_description 'Verify support for the server capabilities required by the IPA-problem-list-item.'
+      description %(
+  # Background
+
+The IPA Condition (Problem List Item) sequence verifies that the system under test is
+able to provide correct responses for Condition queries. These queries
+must contain resources conforming to the IPA-problem-list-item as
+specified in the IPA v1.0.0 Implementation Guide.
+
+# Testing Methodology
+## Searching
+This test sequence will first perform each required search associated
+with this resource. This sequence will perform searches with the
+following parameters:
+
+* patient
+
+### Search Parameters
+The first search uses the selected patient(s) from the prior launch
+sequence. Any subsequent searches will look for its parameter values
+from the results of the first search. For example, the `identifier`
+search in the patient sequence is performed by looking for an existing
+`Patient.identifier` from any of the resources returned in the `_id`
+search. If a value cannot be found this way, the search is skipped.
+
+### Search Validation
+Inferno will retrieve up to the first 20 bundle pages of the reply for
+Condition resources and save them for subsequent tests. Each of
+these resources is then checked to see if it matches the searched
+parameters in accordance with [FHIR search
+guidelines](https://www.hl7.org/fhir/search.html). The test will fail,
+for example, if a Patient search for `gender=male` returns a `female`
+patient.
+
+
+## Must Support
+Each profile contains elements marked as "must support". This test
+sequence expects to see each of these elements at least once. If at
+least one cannot be found, the test will fail. The test will look
+through the Condition resources found in the first test for these
+elements.
+
+## Profile Validation
+Each resource returned from the first search is expected to conform to
+the [IPA-problem-list-item](http://hl7.org/fhir/uv/ipa/StructureDefinition/ipa-problem-list-item). Each element is checked against
+teminology binding and cardinality requirements.
+
+Elements with a required binding are validated against their bound
+ValueSet. If the code/system in the element is not part of the ValueSet,
+then the test will fail.
+
+## Reference Validation
+At least one instance of each external reference in elements marked as
+"must support" within the resources provided by the system must resolve.
+The test will attempt to read each reference found and will fail if no
+read succeeds.
+
+      )
+
+      id :ipa_v100_problem_list_item
+      run_as_group
+      input :standalone_smart_credentials,
+            title: 'SMART App Launch Credentials',
+            type: 'oauth_credentials',
+            optional: true
+
+      def self.metadata
+        @metadata ||= Generator::GroupMetadata.new(YAML.load_file(File.join(__dir__, 'problem_list_item', 'metadata.yml'), aliases: true))
+      end
+  
+      test from: :ipa_v100_problem_list_item_patient_search_test
+      test from: :ipa_v100_problem_list_item_patient_clinical_status_search_test
+      test from: :ipa_v100_problem_list_item_patient_category_search_test
+      test from: :ipa_v100_problem_list_item_patient_category_clinical_status_search_test
+      test from: :ipa_v100_problem_list_item_patient_code_search_test
+      test from: :ipa_v100_problem_list_item_patient_onset_date_search_test
+      test from: :ipa_v100_problem_list_item_read_test
+      test from: :ipa_v100_problem_list_item_provenance_revinclude_search_test
+      test from: :ipa_v100_problem_list_item_validation_test
+      test from: :ipa_v100_problem_list_item_must_support_test
+      test from: :ipa_v100_problem_list_item_reference_resolution_test
+    end
+  end
+end

data/lib/ipa_test_kit/generated/{resource_list.rb → v1.0.0/resource_list.rb}

@@ -1,7 +1,8 @@
 module IpaTestKit
-  module ResourceList
-    RESOURCE_LIST = [
-      'AllergyIntolerance',
+  module IpaV100
+    module ResourceList
+      RESOURCE_LIST = [
+        'AllergyIntolerance',
       'Condition',
       'DocumentReference',
       'Immunization',
@@ -11,8 +12,8 @@ module IpaTestKit
       'Observation',
       'Patient',
       'Practitioner',
-      'PractitionerRole',
-      'Provenance'
-    ].freeze
+      'PractitionerRole'
+      ].freeze
+    end
   end
 end

data/lib/ipa_test_kit/generated/v1.0.0/vitalsigns/metadata.yml

@@ -0,0 +1,370 @@
+---
+:name: vitalsigns
+:class_name: VitalsignsSequence
+:version: v1.0.0
+:reformatted_version: v100
+:resource: Observation
+:profile_url: http://hl7.org/fhir/StructureDefinition/vitalsigns
+:profile_name: Vital Signs Profile
+:profile_version: 4.0.1
+:title: Observation (Vital Signs Profile)
+:short_description: Verify support for the server capabilities required by the Vital
+  Signs Profile.
+:interactions:
+- :code: read
+  :expectation: SHALL
+- :code: search-type
+  :expectation: SHALL
+:operations: []
+:searches:
+- :expectation: SHALL
+  :names:
+  - patient
+  - category
+  :names_not_must_support_or_mandatory: []
+  :must_support_or_mandatory: true
+- :expectation: SHALL
+  :names:
+  - patient
+  - code
+  :names_not_must_support_or_mandatory: []
+  :must_support_or_mandatory: true
+- :expectation: SHALL
+  :names:
+  - patient
+  - category
+  - date
+  :names_not_must_support_or_mandatory: []
+  :must_support_or_mandatory: true
+- :expectation: SHOULD
+  :names:
+  - patient
+  - category
+  - status
+  :names_not_must_support_or_mandatory: []
+  :must_support_or_mandatory: true
+- :expectation: SHOULD
+  :names:
+  - patient
+  - code
+  - date
+  :names_not_must_support_or_mandatory: []
+  :must_support_or_mandatory: true
+:search_definitions:
+  :patient:
+    :paths:
+    - AllergyIntolerance.patient
+    - CarePlan.subject
+    - CareTeam.subject
+    - ClinicalImpression.subject
+    - Composition.subject
+    - Condition.subject
+    - Consent.patient
+    - DetectedIssue.patient
+    - DeviceRequest.subject
+    - DeviceUseStatement.subject
+    - DiagnosticReport.subject
+    - DocumentManifest.subject
+    - DocumentReference.subject
+    - Encounter.subject
+    - EpisodeOfCare.patient
+    - FamilyMemberHistory.patient
+    - Flag.subject
+    - Goal.subject
+    - ImagingStudy.subject
+    - Immunization.patient
+    - List.subject
+    - MedicationAdministration.subject
+    - MedicationDispense.subject
+    - MedicationRequest.subject
+    - MedicationStatement.subject
+    - NutritionOrder.patient
+    - subject
+    - Procedure.subject
+    - RiskAssessment.subject
+    - ServiceRequest.subject
+    - SupplyDelivery.patient
+    - VisionPrescription.patient
+    :full_paths:
+    - AllergyIntolerance.patient
+    - CarePlan.subject
+    - CareTeam.subject
+    - ClinicalImpression.subject
+    - Composition.subject
+    - Condition.subject
+    - Consent.patient
+    - DetectedIssue.patient
+    - DeviceRequest.subject
+    - DeviceUseStatement.subject
+    - DiagnosticReport.subject
+    - DocumentManifest.subject
+    - DocumentReference.subject
+    - Encounter.subject
+    - EpisodeOfCare.patient
+    - FamilyMemberHistory.patient
+    - Flag.subject
+    - Goal.subject
+    - ImagingStudy.subject
+    - Immunization.patient
+    - List.subject
+    - MedicationAdministration.subject
+    - MedicationDispense.subject
+    - MedicationRequest.subject
+    - MedicationStatement.subject
+    - NutritionOrder.patient
+    - Observation.subject
+    - Procedure.subject
+    - RiskAssessment.subject
+    - ServiceRequest.subject
+    - SupplyDelivery.patient
+    - VisionPrescription.patient
+    :comparators: {}
+    :values: []
+    :type: Reference
+    :contains_multiple: false
+  :category:
+    :paths:
+    - category
+    :full_paths:
+    - Observation.category
+    :comparators: {}
+    :values:
+    - vital-signs
+    :type: CodeableConcept
+    :contains_multiple: true
+  :code:
+    :paths:
+    - AllergyIntolerance.code
+    - AllergyIntolerance.reaction.substance
+    - Condition.code
+    - "(DeviceRequest.codeCodeableConcept"
+    - DiagnosticReport.code
+    - FamilyMemberHistory.condition.code
+    - List.code
+    - Medication.code
+    - "(MedicationAdministration.medicationCodeableConcept"
+    - "(MedicationDispense.medicationCodeableConcept"
+    - "(MedicationRequest.medicationCodeableConcept"
+    - "(MedicationStatement.medicationCodeableConcept"
+    - code
+    - Procedure.code
+    - ServiceRequest.code
+    :full_paths:
+    - AllergyIntolerance.code
+    - AllergyIntolerance.reaction.substance
+    - Condition.code
+    - "(DeviceRequest.codeCodeableConcept"
+    - DiagnosticReport.code
+    - FamilyMemberHistory.condition.code
+    - List.code
+    - Medication.code
+    - "(MedicationAdministration.medicationCodeableConcept"
+    - "(MedicationDispense.medicationCodeableConcept"
+    - "(MedicationRequest.medicationCodeableConcept"
+    - "(MedicationStatement.medicationCodeableConcept"
+    - Observation.code
+    - Procedure.code
+    - ServiceRequest.code
+    :comparators: {}
+    :values: []
+    :type: CodeableConcept
+    :contains_multiple: false
+  :date:
+    :paths:
+    - AllergyIntolerance.recordedDate
+    - CarePlan.period
+    - CareTeam.period
+    - ClinicalImpression.date
+    - Composition.date
+    - Consent.dateTime
+    - DiagnosticReport.effective
+    - Encounter.period
+    - EpisodeOfCare.period
+    - FamilyMemberHistory.date
+    - Flag.period
+    - Immunization.occurrence
+    - List.date
+    - effective
+    - Procedure.performed
+    - "(RiskAssessment.occurrenceDateTime"
+    - SupplyRequest.authoredOn
+    :full_paths:
+    - AllergyIntolerance.recordedDate
+    - CarePlan.period
+    - CareTeam.period
+    - ClinicalImpression.date
+    - Composition.date
+    - Consent.dateTime
+    - DiagnosticReport.effective
+    - Encounter.period
+    - EpisodeOfCare.period
+    - FamilyMemberHistory.date
+    - Flag.period
+    - Immunization.occurrence
+    - List.date
+    - Observation.effective
+    - Procedure.performed
+    - "(RiskAssessment.occurrenceDateTime"
+    - SupplyRequest.authoredOn
+    :comparators:
+      :eq: MAY
+      :ne: MAY
+      :gt: MAY
+      :ge: MAY
+      :lt: MAY
+      :le: MAY
+      :sa: MAY
+      :eb: MAY
+      :ap: MAY
+    :values: []
+    :type: date
+    :contains_multiple: false
+  :status:
+    :paths:
+    - status
+    :full_paths:
+    - Observation.status
+    :comparators: {}
+    :values:
+    - registered
+    - preliminary
+    - final
+    - amended
+    - corrected
+    - cancelled
+    - entered-in-error
+    - unknown
+    :type: code
+    :contains_multiple: false
+:include_params: []
+:revincludes:
+- Provenance:target
+:required_concepts: []
+:must_supports:
+  :extensions: []
+  :slices:
+  - :name: Observation.category:VSCat
+    :path: category
+    :discriminator:
+      :type: value
+      :values:
+      - :path: coding.code
+        :value: vital-signs
+      - :path: coding.system
+        :value: http://terminology.hl7.org/CodeSystem/observation-category
+  :elements:
+  - :path: status
+  - :path: category
+  - :path: category.coding
+  - :path: category.coding.system
+    :fixed_value: http://terminology.hl7.org/CodeSystem/observation-category
+  - :path: category.coding.code
+    :fixed_value: vital-signs
+  - :path: code
+  - :path: subject
+    :types:
+    - Reference
+  - :path: effective[x]
+  - :path: value[x]
+  - :path: dataAbsentReason
+  - :path: component
+  - :path: component.code
+  - :path: component.value[x]
+  - :path: component.dataAbsentReason
+:mandatory_elements:
+- Observation.status
+- Observation.category
+- Observation.category.coding
+- Observation.category.coding.system
+- Observation.category.coding.code
+- Observation.code
+- Observation.subject
+- Observation.effective[x]
+- Observation.component.code
+:bindings:
+- :type: code
+  :strength: required
+  :system: http://hl7.org/fhir/ValueSet/observation-status
+  :path: status
+- :type: Quantity
+  :strength: required
+  :system: http://hl7.org/fhir/ValueSet/ucum-vitals-common
+  :path: component.value
+:references:
+- :path: Observation.basedOn
+  :profiles:
+  - http://hl7.org/fhir/StructureDefinition/CarePlan
+  - http://hl7.org/fhir/StructureDefinition/DeviceRequest
+  - http://hl7.org/fhir/StructureDefinition/ImmunizationRecommendation
+  - http://hl7.org/fhir/StructureDefinition/MedicationRequest
+  - http://hl7.org/fhir/StructureDefinition/NutritionOrder
+  - http://hl7.org/fhir/StructureDefinition/ServiceRequest
+- :path: Observation.partOf
+  :profiles:
+  - http://hl7.org/fhir/StructureDefinition/MedicationAdministration
+  - http://hl7.org/fhir/StructureDefinition/MedicationDispense
+  - http://hl7.org/fhir/StructureDefinition/MedicationStatement
+  - http://hl7.org/fhir/StructureDefinition/Procedure
+  - http://hl7.org/fhir/StructureDefinition/Immunization
+  - http://hl7.org/fhir/StructureDefinition/ImagingStudy
+- :path: Observation.subject
+  :profiles:
+  - http://hl7.org/fhir/StructureDefinition/Patient
+- :path: Observation.focus
+  :profiles:
+  - http://hl7.org/fhir/StructureDefinition/Resource
+- :path: Observation.encounter
+  :profiles:
+  - http://hl7.org/fhir/StructureDefinition/Encounter
+- :path: Observation.performer
+  :profiles:
+  - http://hl7.org/fhir/StructureDefinition/Practitioner
+  - http://hl7.org/fhir/StructureDefinition/PractitionerRole
+  - http://hl7.org/fhir/StructureDefinition/Organization
+  - http://hl7.org/fhir/StructureDefinition/CareTeam
+  - http://hl7.org/fhir/StructureDefinition/Patient
+  - http://hl7.org/fhir/StructureDefinition/RelatedPerson
+- :path: Observation.specimen
+  :profiles:
+  - http://hl7.org/fhir/StructureDefinition/Specimen
+- :path: Observation.device
+  :profiles:
+  - http://hl7.org/fhir/StructureDefinition/Device
+  - http://hl7.org/fhir/StructureDefinition/DeviceMetric
+- :path: Observation.hasMember
+  :profiles:
+  - http://hl7.org/fhir/StructureDefinition/QuestionnaireResponse
+  - http://hl7.org/fhir/StructureDefinition/MolecularSequence
+  - http://hl7.org/fhir/StructureDefinition/vitalsigns
+- :path: Observation.derivedFrom
+  :profiles:
+  - http://hl7.org/fhir/StructureDefinition/DocumentReference
+  - http://hl7.org/fhir/StructureDefinition/ImagingStudy
+  - http://hl7.org/fhir/StructureDefinition/Media
+  - http://hl7.org/fhir/StructureDefinition/QuestionnaireResponse
+  - http://hl7.org/fhir/StructureDefinition/MolecularSequence
+  - http://hl7.org/fhir/StructureDefinition/vitalsigns
+:tests:
+- :id: ipa_v100_vitalsigns_patient_category_search_test
+  :file_name: vitalsigns_patient_category_search_test.rb
+- :id: ipa_v100_vitalsigns_patient_code_search_test
+  :file_name: vitalsigns_patient_code_search_test.rb
+- :id: ipa_v100_vitalsigns_patient_category_date_search_test
+  :file_name: vitalsigns_patient_category_date_search_test.rb
+- :id: ipa_v100_vitalsigns_patient_category_status_search_test
+  :file_name: vitalsigns_patient_category_status_search_test.rb
+- :id: ipa_v100_vitalsigns_patient_code_date_search_test
+  :file_name: vitalsigns_patient_code_date_search_test.rb
+- :id: ipa_v100_vitalsigns_read_test
+  :file_name: vitalsigns_read_test.rb
+- :id: ipa_v100_vitalsigns_provenance_revinclude_search_test
+  :file_name: vitalsigns_provenance_revinclude_search_test.rb
+- :id: ipa_v100_vitalsigns_validation_test
+  :file_name: vitalsigns_validation_test.rb
+- :id: ipa_v100_vitalsigns_must_support_test
+  :file_name: vitalsigns_must_support_test.rb
+- :id: ipa_v100_vitalsigns_reference_resolution_test
+  :file_name: vitalsigns_reference_resolution_test.rb
+:id: ipa_v100_vitalsigns
+:file_name: vitalsigns_group.rb
+:delayed_references: []