inferno_core 0.0.3 → 0.0.7
This diff represents the content of publicly available package versions that have been released to one of the supported registries. The information contained in this diff is provided for informational purposes only and reflects changes between package versions as they appear in their respective public registries.
- checksums.yaml +4 -4
- data/bin/inferno +7 -0
- data/lib/inferno/apps/cli/console.rb +12 -0
- data/lib/inferno/apps/cli/main.rb +18 -0
- data/lib/inferno/apps/cli/migration.rb +14 -0
- data/lib/inferno/apps/cli.rb +8 -0
- data/lib/inferno/apps/web/controllers/test_runs/create.rb +30 -10
- data/lib/inferno/apps/web/controllers/test_runs/show.rb +10 -0
- data/lib/inferno/apps/web/controllers/test_sessions/create.rb +1 -0
- data/lib/inferno/apps/web/controllers/test_sessions/last_test_run.rb +22 -0
- data/lib/inferno/apps/web/controllers/test_sessions/results/index.rb +6 -1
- data/lib/inferno/apps/web/controllers/test_sessions/session_data/index.rb +21 -0
- data/lib/inferno/apps/web/router.rb +15 -0
- data/lib/inferno/apps/web/serializers/hash_value_extractor.rb +11 -0
- data/lib/inferno/apps/web/serializers/request.rb +1 -0
- data/lib/inferno/apps/web/serializers/result.rb +8 -0
- data/lib/inferno/apps/web/serializers/session_data.rb +10 -0
- data/lib/inferno/apps/web/serializers/test.rb +3 -6
- data/lib/inferno/apps/web/serializers/test_group.rb +5 -8
- data/lib/inferno/apps/web/serializers/test_run.rb +1 -0
- data/lib/inferno/apps/web/serializers/test_session.rb +1 -1
- data/lib/inferno/apps/web/serializers/test_suite.rb +1 -0
- data/lib/inferno/config/application.rb +8 -2
- data/lib/inferno/config/boot/db.rb +3 -2
- data/lib/inferno/config/boot/logging.rb +2 -0
- data/lib/inferno/config/boot/sidekiq.rb +11 -0
- data/lib/inferno/config/boot/suites.rb +4 -6
- data/lib/inferno/config/boot.rb +2 -0
- data/lib/inferno/db/migrations/001_create_initial_structure.rb +0 -21
- data/lib/inferno/db/migrations/002_add_wait_support.rb +7 -0
- data/lib/inferno/db/migrations/003_update_session_data.rb +18 -0
- data/lib/inferno/db/migrations/004_add_request_results_table.rb +9 -0
- data/lib/inferno/db/migrations/005_add_updated_at_index_to_results.rb +5 -0
- data/lib/inferno/db/schema.rb +154 -0
- data/lib/inferno/dsl/assertions.rb +85 -0
- data/lib/inferno/dsl/configurable.rb +126 -0
- data/lib/inferno/dsl/fhir_client.rb +8 -6
- data/lib/inferno/dsl/fhir_client_builder.rb +19 -3
- data/lib/inferno/dsl/fhir_validation.rb +1 -1
- data/lib/inferno/dsl/http_client.rb +14 -12
- data/lib/inferno/dsl/http_client_builder.rb +3 -3
- data/lib/inferno/dsl/request_storage.rb +34 -13
- data/lib/inferno/dsl/results.rb +49 -0
- data/lib/inferno/dsl/resume_test_route.rb +89 -0
- data/lib/inferno/dsl/runnable.rb +183 -28
- data/lib/inferno/dsl.rb +1 -3
- data/lib/inferno/entities/header.rb +14 -7
- data/lib/inferno/entities/message.rb +16 -6
- data/lib/inferno/entities/request.rb +59 -20
- data/lib/inferno/entities/result.rb +45 -22
- data/lib/inferno/entities/session_data.rb +39 -0
- data/lib/inferno/entities/test.rb +48 -8
- data/lib/inferno/entities/test_group.rb +8 -0
- data/lib/inferno/entities/test_run.rb +36 -6
- data/lib/inferno/entities/test_session.rb +17 -11
- data/lib/inferno/entities.rb +1 -1
- data/lib/inferno/exceptions.rb +24 -0
- data/lib/inferno/jobs/execute_test_run.rb +14 -0
- data/lib/inferno/jobs/resume_test_run.rb +14 -0
- data/lib/inferno/jobs.rb +16 -0
- data/lib/inferno/public/bundle.js +1 -1
- data/lib/inferno/repositories/in_memory_repository.rb +1 -1
- data/lib/inferno/repositories/repository.rb +13 -0
- data/lib/inferno/repositories/requests.rb +5 -4
- data/lib/inferno/repositories/results.rb +151 -3
- data/lib/inferno/repositories/session_data.rb +47 -0
- data/lib/inferno/repositories/test_runs.rb +81 -0
- data/lib/inferno/spec_support.rb +1 -1
- data/lib/inferno/test_runner.rb +126 -32
- data/lib/inferno/utils/markdown_formatter.rb +15 -0
- data/lib/inferno/utils/middleware/request_logger.rb +17 -4
- data/lib/inferno/utils/migration.rb +17 -0
- data/lib/inferno/version.rb +1 -1
- data/lib/inferno.rb +4 -4
- data/spec/factories/request.rb +14 -7
- data/spec/factories/result.rb +8 -0
- data/spec/factories/test_run.rb +2 -0
- metadata +84 -7
- data/bin/inferno-console +0 -8
- data/lib/inferno/dsl/fhir_manipulation.rb +0 -25
- data/lib/inferno/entities/test_input.rb +0 -20
checksums.yaml
CHANGED
@@ -1,7 +1,7 @@
|
|
1
1
|
---
|
2
2
|
SHA256:
|
3
|
-
metadata.gz:
|
4
|
-
data.tar.gz:
|
3
|
+
metadata.gz: 86c8b0374d22ea35f07944360943d2a1240f8ef7365b97d625b32facde4a2eaa
|
4
|
+
data.tar.gz: '0258752a8738b7e9c1da7d9112d0ee4f15bac0a8c7b2acac5f9973bb35d8146c'
|
5
5
|
SHA512:
|
6
|
-
metadata.gz:
|
7
|
-
data.tar.gz:
|
6
|
+
metadata.gz: 76cd8133722b109ed66f9b79eea46279c177fdac68cfe9abea4d0e9caaa76b861e533909923a94121d17e15483be5254f8e36e67cf6abb6121bc12f1e37f5fd7
|
7
|
+
data.tar.gz: 9be9f363e78e653b33818a8e8eee7fc74474ec2ca019b715054b7926d7e5675c46b290e138c0ee020e586d91eecef2759ead3272b6087461af89afeb8fdd7e94
|
data/bin/inferno
ADDED
@@ -0,0 +1,18 @@
|
|
1
|
+
require_relative 'console'
|
2
|
+
require_relative 'migration'
|
3
|
+
|
4
|
+
module Inferno
|
5
|
+
module CLI
|
6
|
+
class Main < Thor
|
7
|
+
desc 'console', 'Start an interactive console session with Inferno'
|
8
|
+
def console
|
9
|
+
Console.new.run
|
10
|
+
end
|
11
|
+
|
12
|
+
desc 'migrate', 'Run database migrations'
|
13
|
+
def migrate
|
14
|
+
Migration.new.run
|
15
|
+
end
|
16
|
+
end
|
17
|
+
end
|
18
|
+
end
|
@@ -3,28 +3,48 @@ module Inferno
|
|
3
3
|
module Controllers
|
4
4
|
module TestRuns
|
5
5
|
class Create < Controller
|
6
|
-
include Import[
|
6
|
+
include Import[
|
7
|
+
test_sessions_repo: 'repositories.test_sessions',
|
8
|
+
session_data_repo: 'repositories.session_data',
|
9
|
+
test_runs_repo: 'repositories.test_runs'
|
10
|
+
]
|
7
11
|
|
8
12
|
PARAMS = [:test_session_id, :test_suite_id, :test_group_id, :test_id].freeze
|
9
13
|
|
10
14
|
def call(params)
|
11
|
-
|
12
|
-
inputs = (params[:inputs] || {}).each_with_object({}) do |input, new_inputs|
|
13
|
-
new_inputs[input[:name].to_sym] = input[:value]
|
14
|
-
end
|
15
|
+
test_session = test_sessions_repo.find(params[:test_session_id])
|
15
16
|
|
16
|
-
test_session = test_sessions_repo.find(test_run.test_session_id)
|
17
17
|
# if testsession.nil?
|
18
|
+
if test_runs_repo.active_test_run_for_session?(test_session.id)
|
19
|
+
self.status = 409
|
20
|
+
self.body = { error: 'Cannot run new test while another test run is in progress' }.to_json
|
21
|
+
return
|
22
|
+
end
|
23
|
+
|
24
|
+
test_run = repo.create(create_params(params).merge(status: 'queued'))
|
25
|
+
missing_inputs = test_run.runnable.missing_inputs(params[:inputs])
|
18
26
|
|
19
|
-
|
20
|
-
|
21
|
-
.run(test_run.runnable, inputs)
|
27
|
+
raise Inferno::Exceptions::RequiredInputsNotFound, missing_inputs if missing_inputs.any?
|
28
|
+
raise Inferno::Exceptions::NotUserRunnableException unless test_run.runnable.user_runnable?
|
22
29
|
|
23
30
|
self.body = serialize(test_run)
|
24
|
-
|
31
|
+
|
32
|
+
params[:inputs]&.each do |input|
|
33
|
+
session_data_repo.save(
|
34
|
+
test_session_id: test_session.id,
|
35
|
+
name: input[:name],
|
36
|
+
value: input[:value]
|
37
|
+
)
|
38
|
+
end
|
39
|
+
|
40
|
+
Jobs.perform(Jobs::ExecuteTestRun, test_run.id)
|
41
|
+
rescue Sequel::ValidationFailed, Sequel::ForeignKeyConstraintViolation,
|
42
|
+
Inferno::Exceptions::RequiredInputsNotFound,
|
43
|
+
Inferno::Exceptions::NotUserRunnableException => e
|
25
44
|
self.body = { errors: e.message }.to_json
|
26
45
|
self.status = 422
|
27
46
|
rescue StandardError => e
|
47
|
+
Application['logger'].error(e.full_message)
|
28
48
|
self.body = { errors: e.message }.to_json
|
29
49
|
self.status = 500
|
30
50
|
end
|
@@ -7,6 +7,16 @@ module Inferno
|
|
7
7
|
test_run = repo.find(params[:id])
|
8
8
|
halt 404 if test_run.nil?
|
9
9
|
|
10
|
+
if params[:include_results] == 'true'
|
11
|
+
results_repo = Inferno::Repositories::Results.new
|
12
|
+
test_run.results =
|
13
|
+
if params[:after].present?
|
14
|
+
results_repo.test_run_results_after(test_run_id: test_run.id, after: Time.parse(params[:after]))
|
15
|
+
else
|
16
|
+
repo.results_for_test_run(test_run.id)
|
17
|
+
end
|
18
|
+
end
|
19
|
+
|
10
20
|
self.body = serialize(test_run)
|
11
21
|
end
|
12
22
|
end
|
@@ -0,0 +1,22 @@
|
|
1
|
+
module Inferno
|
2
|
+
module Web
|
3
|
+
module Controllers
|
4
|
+
module TestSessions
|
5
|
+
class LastTestRun < Controller
|
6
|
+
include Import[test_runs_repo: 'repositories.test_runs']
|
7
|
+
|
8
|
+
def call(params)
|
9
|
+
test_run = test_runs_repo.last_test_run(params[:test_session_id])
|
10
|
+
|
11
|
+
self.body =
|
12
|
+
if test_run.nil?
|
13
|
+
nil
|
14
|
+
else
|
15
|
+
Inferno::Web::Serializers::TestRun.render(test_run)
|
16
|
+
end
|
17
|
+
end
|
18
|
+
end
|
19
|
+
end
|
20
|
+
end
|
21
|
+
end
|
22
|
+
end
|
@@ -7,7 +7,12 @@ module Inferno
|
|
7
7
|
include Import[test_sessions_repo: 'repositories.test_sessions']
|
8
8
|
|
9
9
|
def call(params)
|
10
|
-
self.body =
|
10
|
+
self.body =
|
11
|
+
if params[:all] == 'true'
|
12
|
+
serialize(test_sessions_repo.results_for_test_session(params[:test_session_id]))
|
13
|
+
else
|
14
|
+
serialize(repo.current_results_for_test_session(params[:test_session_id]))
|
15
|
+
end
|
11
16
|
end
|
12
17
|
end
|
13
18
|
end
|
@@ -0,0 +1,21 @@
|
|
1
|
+
module Inferno
|
2
|
+
module Web
|
3
|
+
module Controllers
|
4
|
+
module TestSessions
|
5
|
+
module SessionData
|
6
|
+
class Index < Controller
|
7
|
+
include Import[session_data_repo: 'repositories.session_data']
|
8
|
+
|
9
|
+
def self.resource_class
|
10
|
+
'SessionData'
|
11
|
+
end
|
12
|
+
|
13
|
+
def call(params)
|
14
|
+
self.body = serialize(session_data_repo.get_all_from_session(params[:test_session_id]))
|
15
|
+
end
|
16
|
+
end
|
17
|
+
end
|
18
|
+
end
|
19
|
+
end
|
20
|
+
end
|
21
|
+
end
|
@@ -13,7 +13,11 @@ module Inferno
|
|
13
13
|
|
14
14
|
resources 'test_sessions', only: [:create, :show] do
|
15
15
|
resources 'results', only: [:index]
|
16
|
+
resources 'session_data', only: [:index]
|
16
17
|
end
|
18
|
+
get 'test_sessions/:test_session_id/last_test_run',
|
19
|
+
to: Inferno::Web::Controllers::TestSessions::LastTestRun,
|
20
|
+
as: :last_test_run
|
17
21
|
|
18
22
|
resources 'test_suites', only: [:index, :show]
|
19
23
|
|
@@ -22,6 +26,17 @@ module Inferno
|
|
22
26
|
|
23
27
|
get '/', to: ->(_env) { [200, {}, [client_page]] }
|
24
28
|
get '/test_sessions/:id', to: ->(_env) { [200, {}, [client_page]] }
|
29
|
+
|
30
|
+
Inferno.routes.each do |route|
|
31
|
+
cleaned_id = route[:suite].id.gsub(/[^a-zA-Z\d\-._~]/, '_')
|
32
|
+
path = "/custom/#{cleaned_id}#{route[:path]}"
|
33
|
+
Application['logger'].info("Registering custom route: #{path}")
|
34
|
+
if route[:method] == :all
|
35
|
+
mount route[:handler], at: path
|
36
|
+
else
|
37
|
+
send(route[:method], path, to: route[:handler])
|
38
|
+
end
|
39
|
+
end
|
25
40
|
end
|
26
41
|
end
|
27
42
|
end
|
@@ -1,3 +1,5 @@
|
|
1
|
+
require 'json'
|
2
|
+
|
1
3
|
module Inferno
|
2
4
|
module Web
|
3
5
|
module Serializers
|
@@ -12,6 +14,12 @@ module Inferno
|
|
12
14
|
field :test_session_id
|
13
15
|
field :result
|
14
16
|
field :result_message, if: :field_present?
|
17
|
+
field :created_at
|
18
|
+
field :updated_at
|
19
|
+
|
20
|
+
field :outputs do |result, _options|
|
21
|
+
result.output_json.present? ? JSON.parse(result.output_json) : []
|
22
|
+
end
|
15
23
|
|
16
24
|
association :messages, blueprint: Message, if: :field_present?
|
17
25
|
association :requests, blueprint: Request, view: :summary, if: :field_present?
|
@@ -4,13 +4,10 @@ module Inferno
|
|
4
4
|
class Test < Serializer
|
5
5
|
identifier :id
|
6
6
|
field :title
|
7
|
-
field :inputs
|
8
|
-
|
9
|
-
end
|
10
|
-
field :outputs do |test, _options|
|
11
|
-
test.outputs.map { |output| { name: output } }
|
12
|
-
end
|
7
|
+
field :input_definitions, name: :inputs, extractor: HashValueExtractor, blueprint: Input
|
8
|
+
field :output_definitions, name: :outputs, extractor: HashValueExtractor
|
13
9
|
field :description
|
10
|
+
field :user_runnable?, name: :user_runnable
|
14
11
|
end
|
15
12
|
end
|
16
13
|
end
|
@@ -4,19 +4,16 @@ module Inferno
|
|
4
4
|
class TestGroup < Serializer
|
5
5
|
identifier :id
|
6
6
|
|
7
|
-
# TODO: fill out test group
|
8
7
|
field :title
|
9
8
|
field :description
|
10
|
-
|
9
|
+
field :test_count
|
10
|
+
field :run_as_group?, name: :run_as_group
|
11
|
+
field :user_runnable?, name: :user_runnable
|
11
12
|
|
12
13
|
association :groups, name: :test_groups, blueprint: TestGroup
|
13
14
|
association :tests, blueprint: Test
|
14
|
-
field :inputs
|
15
|
-
|
16
|
-
end
|
17
|
-
field :outputs do |group, _options|
|
18
|
-
group.outputs.map { |input| { name: input } }
|
19
|
-
end
|
15
|
+
field :input_definitions, name: :inputs, extractor: HashValueExtractor, blueprint: Input
|
16
|
+
field :output_definitions, name: :outputs, extractor: HashValueExtractor
|
20
17
|
end
|
21
18
|
end
|
22
19
|
end
|
@@ -1,3 +1,7 @@
|
|
1
|
+
require 'active_support/all'
|
2
|
+
require 'dotenv'
|
3
|
+
require 'dry/system/container'
|
4
|
+
require 'sequel'
|
1
5
|
require_relative 'boot'
|
2
6
|
|
3
7
|
module Inferno
|
@@ -6,6 +10,10 @@ module Inferno
|
|
6
10
|
|
7
11
|
use :env, inferrer: -> { ENV.fetch('APP_ENV', :development).to_sym }
|
8
12
|
|
13
|
+
Application.register('js_host', ENV.fetch('JS_HOST', ''))
|
14
|
+
Application.register('async_jobs', ENV['ASYNC_JOBS'] != 'false')
|
15
|
+
Application.register('inferno_host', ENV.fetch('INFERNO_HOST', 'http://localhost:4567'))
|
16
|
+
|
9
17
|
configure do |config|
|
10
18
|
config.root = File.expand_path('../../..', __dir__)
|
11
19
|
config.default_namespace = 'inferno'
|
@@ -15,8 +23,6 @@ module Inferno
|
|
15
23
|
config.auto_register = 'lib'
|
16
24
|
end
|
17
25
|
|
18
|
-
Application.register('js_host', ENV.fetch('JS_HOST', ''))
|
19
|
-
|
20
26
|
load_paths!('lib')
|
21
27
|
end
|
22
28
|
end
|
@@ -1,3 +1,5 @@
|
|
1
|
+
require 'sequel'
|
2
|
+
|
1
3
|
Inferno::Application.boot(:db) do
|
2
4
|
init do
|
3
5
|
use :logging
|
@@ -10,6 +12,7 @@ Inferno::Application.boot(:db) do
|
|
10
12
|
config = YAML.load_file(config_path)[ENV['APP_ENV']]
|
11
13
|
.merge(logger: Inferno::Application['logger'])
|
12
14
|
connection = Sequel.connect(config)
|
15
|
+
connection.sql_log_level = :debug
|
13
16
|
|
14
17
|
register('db.config', config)
|
15
18
|
register('db.connection', connection)
|
@@ -17,7 +20,5 @@ Inferno::Application.boot(:db) do
|
|
17
20
|
|
18
21
|
start do
|
19
22
|
Sequel.extension :migration
|
20
|
-
migration_path = File.join(Inferno::Application.root, 'lib', 'inferno', 'db', 'migrations')
|
21
|
-
Sequel::Migrator.run(Inferno::Application['db.connection'], migration_path)
|
22
23
|
end
|
23
24
|
end
|
@@ -4,12 +4,10 @@ Inferno::Application.boot(:suites) do
|
|
4
4
|
|
5
5
|
files_to_load = Dir.glob(File.join(Dir.pwd, 'lib', '*.rb'))
|
6
6
|
|
7
|
-
if ENV['LOAD_DEV_SUITES']
|
8
|
-
|
9
|
-
|
10
|
-
|
11
|
-
if ENV['LOAD_UI_SUITES'] == 'true'
|
12
|
-
files_to_load.concat Dir.glob(File.join(Inferno::Application.root, 'ui_suites', '**', '*.rb'))
|
7
|
+
if ENV['LOAD_DEV_SUITES'].present?
|
8
|
+
ENV['LOAD_DEV_SUITES'].split(',').map(&:strip).reject(&:empty?).each do |suite|
|
9
|
+
files_to_load.concat Dir.glob(File.join(Inferno::Application.root, 'dev_suites', suite, '**', '*.rb'))
|
10
|
+
end
|
13
11
|
end
|
14
12
|
|
15
13
|
if ENV['APP_ENV'] == 'test'
|
data/lib/inferno/config/boot.rb
CHANGED
@@ -1,26 +1,5 @@
|
|
1
1
|
Sequel.migration do
|
2
2
|
change do
|
3
|
-
#
|
4
|
-
# NOT NEEDED BECUASE THEY ARE DEFINED WITHIN TEST SUITE.
|
5
|
-
# MUST BE REFERENCED USING SOME KIND OF GLOBALLY UNIQUE KEY
|
6
|
-
# THAT IS REPRESENTED AS A STRING
|
7
|
-
#
|
8
|
-
|
9
|
-
# create_table :test_suites do
|
10
|
-
# end
|
11
|
-
|
12
|
-
# create_table :test_groups do
|
13
|
-
# end
|
14
|
-
|
15
|
-
# create_table :tests do
|
16
|
-
# end
|
17
|
-
|
18
|
-
# create_table :test_inputs do
|
19
|
-
# end
|
20
|
-
|
21
|
-
# create_table :test_outputs do
|
22
|
-
# end
|
23
|
-
|
24
3
|
# A way for the test to signal that it requires some kind of action by the
|
25
4
|
# app that is invoking the test (e.g. SMART Launch, perhaps mid-test manual verification)
|
26
5
|
# create_table :test_prompts do
|
@@ -0,0 +1,18 @@
|
|
1
|
+
Sequel.migration do
|
2
|
+
change do
|
3
|
+
drop_table :test_run_inputs
|
4
|
+
drop_table :result_inputs
|
5
|
+
|
6
|
+
set_column_type :session_data, :value, String, text: true
|
7
|
+
drop_index :session_data, [:test_session_id, :name], concurrently: true
|
8
|
+
add_index :session_data, [:test_session_id, :name], unique: true, concurrently: true
|
9
|
+
drop_index :session_data, :id, concurrently: true
|
10
|
+
add_index :session_data, :id, unique: true, concurrently: true
|
11
|
+
|
12
|
+
add_column :results, :input_json, String, text: true
|
13
|
+
add_column :results, :output_json, String, text: true
|
14
|
+
add_index :results, [:test_session_id, :test_id], concurrently: true
|
15
|
+
add_index :results, [:test_session_id, :test_group_id], concurrently: true
|
16
|
+
add_index :results, [:test_session_id, :test_suite_id], concurrently: true
|
17
|
+
end
|
18
|
+
end
|
@@ -0,0 +1,9 @@
|
|
1
|
+
Sequel.migration do
|
2
|
+
change do
|
3
|
+
create_table :requests_results do
|
4
|
+
# using results_id instead of result_id to avoid ambiguous column error
|
5
|
+
foreign_key :results_id, :results, index: true, type: String, null: false
|
6
|
+
foreign_key :requests_id, :requests, index: true, type: String, null: false
|
7
|
+
end
|
8
|
+
end
|
9
|
+
end
|