RubyGems - hydra-works - Versions diffs - 0.16.0 → 2.0.0 - Mend

hydra-works 0.16.0 → 2.0.0

Files changed (62) hide show

checksums.yaml +5 -5
data/.circleci/config.yml +59 -0
data/.gitignore +3 -1
data/.rubocop.yml +2 -6
data/.rubocop_todo.yml +5 -0
data/.solr_wrapper +1 -0
data/CHANGELOG.md +621 -0
data/CODE_OF_CONDUCT.md +36 -0
data/CONTRIBUTING.md +23 -21
data/Gemfile +11 -3
data/LICENSE +14 -16
data/README.md +54 -12
data/SUPPORT.md +5 -0
data/hydra-works.gemspec +15 -13
data/lib/hydra/works/characterization.rb +5 -4
data/lib/hydra/works/characterization/fits_document.rb +348 -144
data/lib/hydra/works/characterization/schema/audio_schema.rb +2 -0
data/lib/hydra/works/characterization/schema/video_schema.rb +2 -0
data/lib/hydra/works/models/concerns/collection_behavior.rb +44 -0
data/lib/hydra/works/models/concerns/file_set_behavior.rb +20 -0
data/lib/hydra/works/models/concerns/work_behavior.rb +54 -0
data/lib/hydra/works/services/add_external_file_to_file_set.rb +1 -1
data/lib/hydra/works/services/add_file_to_file_set.rb +1 -1
data/lib/hydra/works/services/characterization_service.rb +5 -0
data/lib/hydra/works/services/determine_original_name.rb +1 -1
data/lib/hydra/works/version.rb +1 -1
data/lib/hydra/works/virus_scanner.rb +18 -2
data/spec/fixtures/fits_0.8.5_tiff.xml +78 -0
data/spec/fixtures/fits_1.2.0_avi.xml +83 -0
data/spec/fixtures/fits_1.2.0_jpg.xml +76 -0
data/spec/fixtures/fits_1.2.0_mp3.xml +51 -0
data/spec/fixtures/fits_1.2.0_mp4.xml +88 -0
data/spec/fixtures/fits_netcdf_two_mimetypes.xml +35 -0
data/spec/hydra/works/characterization_spec.rb +12 -5
data/spec/hydra/works/models/collection_spec.rb +162 -0
data/spec/hydra/works/models/concerns/file_set/contained_files_spec.rb +3 -16
data/spec/hydra/works/models/file_set_spec.rb +47 -0
data/spec/hydra/works/models/work_spec.rb +213 -7
data/spec/hydra/works/services/characterization_service_spec.rb +90 -27
data/spec/hydra/works/services/persist_derivatives_spec.rb +6 -6
data/spec/hydra/works/virus_scanner_spec.rb +31 -0
data/use-cases/princeton_book_use_case.md +1 -1
metadata +77 -67
data/.travis.yml +0 -15
data/lib/hydra/works/characterization/fits_mapper.rb +0 -0
data/solr/config/_rest_managed.json +0 -3
data/solr/config/admin-extra.html +0 -31
data/solr/config/elevate.xml +0 -36
data/solr/config/mapping-ISOLatin1Accent.txt +0 -246
data/solr/config/protwords.txt +0 -21
data/solr/config/schema.xml +0 -372
data/solr/config/scripts.conf +0 -24
data/solr/config/solrconfig.xml +0 -419
data/solr/config/spellings.txt +0 -2
data/solr/config/stopwords.txt +0 -58
data/solr/config/stopwords_en.txt +0 -58
data/solr/config/synonyms.txt +0 -31
data/solr/config/xslt/example.xsl +0 -132
data/solr/config/xslt/example_atom.xsl +0 -67
data/solr/config/xslt/example_rss.xsl +0 -66
data/solr/config/xslt/luke.xsl +0 -337
data/spec/fixtures/eicar.txt +0 -1

data/solr/config/stopwords_en.txt DELETED

@@ -1,58 +0,0 @@
-# Licensed to the Apache Software Foundation (ASF) under one or more
-# contributor license agreements.  See the NOTICE file distributed with
-# this work for additional information regarding copyright ownership.
-# The ASF licenses this file to You under the Apache License, Version 2.0
-# (the "License"); you may not use this file except in compliance with
-# the License.  You may obtain a copy of the License at
-#
-#     http://www.apache.org/licenses/LICENSE-2.0
-#
-# Unless required by applicable law or agreed to in writing, software
-# distributed under the License is distributed on an "AS IS" BASIS,
-# WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
-# See the License for the specific language governing permissions and
-# limitations under the License.
-#-----------------------------------------------------------------------
-# a couple of test stopwords to test that the words are really being
-# configured from this file:
-stopworda
-stopwordb
-#Standard english stop words taken from Lucene's StopAnalyzer
-a
-an
-and
-are
-as
-at
-be
-but
-by
-for
-if
-in
-into
-is
-it
-no
-not
-of
-on
-or
-s
-such
-t
-that
-the
-their
-then
-there
-these
-they
-this
-to
-was
-will
-with

data/solr/config/synonyms.txt DELETED

@@ -1,31 +0,0 @@
-# The ASF licenses this file to You under the Apache License, Version 2.0
-# (the "License"); you may not use this file except in compliance with
-# the License.  You may obtain a copy of the License at
-#
-#     http://www.apache.org/licenses/LICENSE-2.0
-#
-# Unless required by applicable law or agreed to in writing, software
-# distributed under the License is distributed on an "AS IS" BASIS,
-# WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
-# See the License for the specific language governing permissions and
-# limitations under the License.
-#-----------------------------------------------------------------------
-#some test synonym mappings unlikely to appear in real input text
-aaa => aaaa
-bbb => bbbb1 bbbb2
-ccc => cccc1,cccc2
-a\=>a => b\=>b
-a\,a => b\,b
-fooaaa,baraaa,bazaaa
-# Some synonym groups specific to this example
-GB,gib,gigabyte,gigabytes
-MB,mib,megabyte,megabytes
-Television, Televisions, TV, TVs
-#notice we use "gib" instead of "GiB" so any WordDelimiterFilter coming
-#after us won't split it into two words.
-# Synonym mappings can be used for spelling correction too
-pixima => pixma

data/solr/config/xslt/example.xsl DELETED

@@ -1,132 +0,0 @@
-<?xml version='1.0' encoding='UTF-8'?>
-<!--
- * Licensed to the Apache Software Foundation (ASF) under one or more
- * contributor license agreements.  See the NOTICE file distributed with
- * this work for additional information regarding copyright ownership.
- * The ASF licenses this file to You under the Apache License, Version 2.0
- * (the "License"); you may not use this file except in compliance with
- * the License.  You may obtain a copy of the License at
- *
- *     http://www.apache.org/licenses/LICENSE-2.0
- *
- * Unless required by applicable law or agreed to in writing, software
- * distributed under the License is distributed on an "AS IS" BASIS,
- * WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
- * See the License for the specific language governing permissions and
- * limitations under the License.
- -->
-<!--
-  Simple transform of Solr query results to HTML
- -->
-<xsl:stylesheet version='1.0'
-    xmlns:xsl='http://www.w3.org/1999/XSL/Transform'
->
-  <xsl:output media-type="text/html; charset=UTF-8" encoding="UTF-8"/>
-  <xsl:variable name="title" select="concat('Solr search results (',response/result/@numFound,' documents)')"/>
-  <xsl:template match='/'>
-    <html>
-      <head>
-        <title><xsl:value-of select="$title"/></title>
-        <xsl:call-template name="css"/>
-      </head>
-      <body>
-        <h1><xsl:value-of select="$title"/></h1>
-        <div class="note">
-          This has been formatted by the sample "example.xsl" transform -
-          use your own XSLT to get a nicer page
-        </div>
-        <xsl:apply-templates select="response/result/doc"/>
-      </body>
-    </html>
-  </xsl:template>
-  <xsl:template match="doc">
-    <xsl:variable name="pos" select="position()"/>
-    <div class="doc">
-      <table width="100%">
-        <xsl:apply-templates>
-          <xsl:with-param name="pos"><xsl:value-of select="$pos"/></xsl:with-param>
-        </xsl:apply-templates>
-      </table>
-    </div>
-  </xsl:template>
-  <xsl:template match="doc/*[@name='score']" priority="100">
-    <xsl:param name="pos"></xsl:param>
-    <tr>
-      <td class="name">
-        <xsl:value-of select="@name"/>
-      </td>
-      <td class="value">
-        <xsl:value-of select="."/>
-        <xsl:if test="boolean(//lst[@name='explain'])">
-          <xsl:element name="a">
-            <!-- can't allow whitespace here -->
-            <xsl:attribute name="href">javascript:toggle("<xsl:value-of select="concat('exp-',$pos)" />");</xsl:attribute>?</xsl:element>
-          <br/>
-          <xsl:element name="div">
-            <xsl:attribute name="class">exp</xsl:attribute>
-            <xsl:attribute name="id">
-              <xsl:value-of select="concat('exp-',$pos)" />
-            </xsl:attribute>
-            <xsl:value-of select="//lst[@name='explain']/str[position()=$pos]"/>
-          </xsl:element>
-        </xsl:if>
-      </td>
-    </tr>
-  </xsl:template>
-  <xsl:template match="doc/arr" priority="100">
-    <tr>
-      <td class="name">
-        <xsl:value-of select="@name"/>
-      </td>
-      <td class="value">
-        <ul>
-        <xsl:for-each select="*">
-          <li><xsl:value-of select="."/></li>
-        </xsl:for-each>
-        </ul>
-      </td>
-    </tr>
-  </xsl:template>
-  <xsl:template match="doc/*">
-    <tr>
-      <td class="name">
-        <xsl:value-of select="@name"/>
-      </td>
-      <td class="value">
-        <xsl:value-of select="."/>
-      </td>
-    </tr>
-  </xsl:template>
-  <xsl:template match="*"/>
-  <xsl:template name="css">
-    <script>
-      function toggle(id) {
-        var obj = document.getElementById(id);
-        obj.style.display = (obj.style.display != 'block') ? 'block' : 'none';
-      }
-    </script>
-    <style type="text/css">
-      body { font-family: "Lucida Grande", sans-serif }
-      td.name { font-style: italic; font-size:80%; }
-      td { vertical-align: top; }
-      ul { margin: 0px; margin-left: 1em; padding: 0px; }
-      .note { font-size:80%; }
-      .doc { margin-top: 1em; border-top: solid grey 1px; }
-      .exp { display: none; font-family: monospace; white-space: pre; }
-    </style>
-  </xsl:template>
-</xsl:stylesheet>

data/solr/config/xslt/example_atom.xsl DELETED

@@ -1,67 +0,0 @@
-<?xml version='1.0' encoding='UTF-8'?>
-<!--
- * Licensed to the Apache Software Foundation (ASF) under one or more
- * contributor license agreements.  See the NOTICE file distributed with
- * this work for additional information regarding copyright ownership.
- * The ASF licenses this file to You under the Apache License, Version 2.0
- * (the "License"); you may not use this file except in compliance with
- * the License.  You may obtain a copy of the License at
- *
- *     http://www.apache.org/licenses/LICENSE-2.0
- *
- * Unless required by applicable law or agreed to in writing, software
- * distributed under the License is distributed on an "AS IS" BASIS,
- * WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
- * See the License for the specific language governing permissions and
- * limitations under the License.
- -->
-<!--
-  Simple transform of Solr query results to Atom
- -->
-<xsl:stylesheet version='1.0'
-    xmlns:xsl='http://www.w3.org/1999/XSL/Transform'>
-  <xsl:output
-       method="xml"
-       encoding="utf-8"
-       media-type="text/xml; charset=UTF-8"
-  />
-  <xsl:template match='/'>
-    <xsl:variable name="query" select="response/lst[@name='responseHeader']/lst[@name='params']/str[@name='q']"/>
-    <feed xmlns="http://www.w3.org/2005/Atom">
-      <title>Example Solr Atom 1.0 Feed</title>
-      <subtitle>
-       This has been formatted by the sample "example_atom.xsl" transform -
-       use your own XSLT to get a nicer Atom feed.
-      </subtitle>
-      <author>
-        <name>Apache Solr</name>
-        <email>solr-user@lucene.apache.org</email>
-      </author>
-      <link rel="self" type="application/atom+xml"
-            href="http://localhost:8983/solr/q={$query}&amp;wt=xslt&amp;tr=atom.xsl"/>
-      <updated>
-        <xsl:value-of select="response/result/doc[position()=1]/date[@name='timestamp']"/>
-      </updated>
-      <id>tag:localhost,2007:example</id>
-      <xsl:apply-templates select="response/result/doc"/>
-    </feed>
-  </xsl:template>
-  <!-- search results xslt -->
-  <xsl:template match="doc">
-    <xsl:variable name="id" select="str[@name='id']"/>
-    <entry>
-      <title><xsl:value-of select="str[@name='name']"/></title>
-      <link href="http://localhost:8983/solr/select?q={$id}"/>
-      <id>tag:localhost,2007:<xsl:value-of select="$id"/></id>
-      <summary><xsl:value-of select="arr[@name='features']"/></summary>
-      <updated><xsl:value-of select="date[@name='timestamp']"/></updated>
-    </entry>
-  </xsl:template>
-</xsl:stylesheet>

data/solr/config/xslt/example_rss.xsl DELETED

@@ -1,66 +0,0 @@
-<?xml version='1.0' encoding='UTF-8'?>
-<!--
- * Licensed to the Apache Software Foundation (ASF) under one or more
- * contributor license agreements.  See the NOTICE file distributed with
- * this work for additional information regarding copyright ownership.
- * The ASF licenses this file to You under the Apache License, Version 2.0
- * (the "License"); you may not use this file except in compliance with
- * the License.  You may obtain a copy of the License at
- *
- *     http://www.apache.org/licenses/LICENSE-2.0
- *
- * Unless required by applicable law or agreed to in writing, software
- * distributed under the License is distributed on an "AS IS" BASIS,
- * WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
- * See the License for the specific language governing permissions and
- * limitations under the License.
- -->
-<!--
-  Simple transform of Solr query results to RSS
- -->
-<xsl:stylesheet version='1.0'
-    xmlns:xsl='http://www.w3.org/1999/XSL/Transform'>
-  <xsl:output
-       method="xml"
-       encoding="utf-8"
-       media-type="text/xml; charset=UTF-8"
-  />
-  <xsl:template match='/'>
-    <rss version="2.0">
-       <channel>
-	 <title>Example Solr RSS 2.0 Feed</title>
-         <link>http://localhost:8983/solr</link>
-         <description>
-          This has been formatted by the sample "example_rss.xsl" transform -
-          use your own XSLT to get a nicer RSS feed.
-         </description>
-         <language>en-us</language>
-         <docs>http://localhost:8983/solr</docs>
-         <xsl:apply-templates select="response/result/doc"/>
-       </channel>
-    </rss>
-  </xsl:template>
-  <!-- search results xslt -->
-  <xsl:template match="doc">
-    <xsl:variable name="id" select="str[@name='id']"/>
-    <xsl:variable name="timestamp" select="date[@name='timestamp']"/>
-    <item>
-      <title><xsl:value-of select="str[@name='name']"/></title>
-      <link>
-        http://localhost:8983/solr/select?q=id:<xsl:value-of select="$id"/>
-      </link>
-      <description>
-        <xsl:value-of select="arr[@name='features']"/>
-      </description>
-      <pubDate><xsl:value-of select="$timestamp"/></pubDate>
-      <guid>
-        http://localhost:8983/solr/select?q=id:<xsl:value-of select="$id"/>
-      </guid>
-    </item>
-  </xsl:template>
-</xsl:stylesheet>

data/solr/config/xslt/luke.xsl DELETED

@@ -1,337 +0,0 @@
-<?xml version="1.0" encoding="UTF-8"?>
-<!--
-    Licensed to the Apache Software Foundation (ASF) under one or more
-    contributor license agreements.  See the NOTICE file distributed with
-    this work for additional information regarding copyright ownership.
-    The ASF licenses this file to You under the Apache License, Version 2.0
-    (the "License"); you may not use this file except in compliance with
-    the License.  You may obtain a copy of the License at
-    http://www.apache.org/licenses/LICENSE-2.0
-    Unless required by applicable law or agreed to in writing, software
-    distributed under the License is distributed on an "AS IS" BASIS,
-    WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
-    See the License for the specific language governing permissions and
-    limitations under the License.
--->
-<!--
-  Display the luke request handler with graphs
- -->
-<xsl:stylesheet
-    xmlns:xsl="http://www.w3.org/1999/XSL/Transform"
-    xmlns="http://www.w3.org/1999/xhtml"
-    version="1.0"
-    >
-    <xsl:output
-        method="html"
-        encoding="UTF-8"
-        media-type="text/html; charset=UTF-8"
-        doctype-public="-//W3C//DTD XHTML 1.0 Strict//EN"
-        doctype-system="http://www.w3.org/TR/xhtml1/DTD/xhtml1-strict.dtd"
-    />
-    <xsl:variable name="title">Solr Luke Request Handler Response</xsl:variable>
-    <xsl:template match="/">
-        <html xmlns="http://www.w3.org/1999/xhtml">
-            <head>
-                <link rel="stylesheet" type="text/css" href="solr-admin.css"/>
-                <link rel="icon" href="favicon.ico" type="image/ico"/>
-                <link rel="shortcut icon" href="favicon.ico" type="image/ico"/>
-                <title>
-                    <xsl:value-of select="$title"/>
-                </title>
-                <xsl:call-template name="css"/>
-            </head>
-            <body>
-                <h1>
-                    <xsl:value-of select="$title"/>
-                </h1>
-                <div class="doc">
-                    <ul>
-                        <xsl:if test="response/lst[@name='index']">
-                            <li>
-                                <a href="#index">Index Statistics</a>
-                            </li>
-                        </xsl:if>
-                        <xsl:if test="response/lst[@name='fields']">
-                            <li>
-                                <a href="#fields">Field Statistics</a>
-                                <ul>
-                                    <xsl:for-each select="response/lst[@name='fields']/lst">
-                                        <li>
-                                            <a href="#{@name}">
-                                                <xsl:value-of select="@name"/>
-                                            </a>
-                                        </li>
-                                    </xsl:for-each>
-                                </ul>
-                            </li>
-                        </xsl:if>
-                        <xsl:if test="response/lst[@name='doc']">
-                            <li>
-                                <a href="#doc">Document statistics</a>
-                            </li>
-                        </xsl:if>
-                    </ul>
-                </div>
-                <xsl:if test="response/lst[@name='index']">
-                    <h2><a name="index"/>Index Statistics</h2>
-                    <xsl:apply-templates select="response/lst[@name='index']"/>
-                </xsl:if>
-                <xsl:if test="response/lst[@name='fields']">
-                    <h2><a name="fields"/>Field Statistics</h2>
-                    <xsl:apply-templates select="response/lst[@name='fields']"/>
-                </xsl:if>
-                <xsl:if test="response/lst[@name='doc']">
-                    <h2><a name="doc"/>Document statistics</h2>
-                    <xsl:apply-templates select="response/lst[@name='doc']"/>
-                </xsl:if>
-            </body>
-        </html>
-    </xsl:template>
-    <xsl:template match="lst">
-        <xsl:if test="parent::lst">
-            <tr>
-                <td colspan="2">
-                    <div class="doc">
-                        <xsl:call-template name="list"/>
-                    </div>
-                </td>
-            </tr>
-        </xsl:if>
-        <xsl:if test="not(parent::lst)">
-            <div class="doc">
-                <xsl:call-template name="list"/>
-            </div>
-        </xsl:if>
-    </xsl:template>
-    <xsl:template name="list">
-        <xsl:if test="count(child::*)>0">
-            <table>
-                <thead>
-                    <tr>
-                        <th colspan="2">
-                            <p>
-                                <a name="{@name}"/>
-                            </p>
-                            <xsl:value-of select="@name"/>
-                        </th>
-                    </tr>
-                </thead>
-                <tbody>
-                    <xsl:choose>
-                        <xsl:when
-                            test="@name='histogram'">
-                            <tr>
-                                <td colspan="2">
-                                    <xsl:call-template name="histogram"/>
-                                </td>
-                            </tr>
-                        </xsl:when>
-                        <xsl:otherwise>
-                            <xsl:apply-templates/>
-                        </xsl:otherwise>
-                    </xsl:choose>
-                </tbody>
-            </table>
-        </xsl:if>
-    </xsl:template>
-    <xsl:template name="histogram">
-        <div class="doc">
-            <xsl:call-template name="barchart">
-                <xsl:with-param name="max_bar_width">50</xsl:with-param>
-                <xsl:with-param name="iwidth">800</xsl:with-param>
-                <xsl:with-param name="iheight">160</xsl:with-param>
-                <xsl:with-param name="fill">blue</xsl:with-param>
-            </xsl:call-template>
-        </div>
-    </xsl:template>
-    <xsl:template name="barchart">
-        <xsl:param name="max_bar_width"/>
-        <xsl:param name="iwidth"/>
-        <xsl:param name="iheight"/>
-        <xsl:param name="fill"/>
-        <xsl:variable name="max">
-            <xsl:for-each select="int">
-                <xsl:sort data-type="number" order="descending"/>
-                <xsl:if test="position()=1">
-                    <xsl:value-of select="."/>
-                </xsl:if>
-            </xsl:for-each>
-        </xsl:variable>
-        <xsl:variable name="bars">
-           <xsl:value-of select="count(int)"/>
-        </xsl:variable>
-        <xsl:variable name="bar_width">
-           <xsl:choose>
-             <xsl:when test="$max_bar_width &lt; ($iwidth div $bars)">
-               <xsl:value-of select="$max_bar_width"/>
-             </xsl:when>
-             <xsl:otherwise>
-               <xsl:value-of select="$iwidth div $bars"/>
-             </xsl:otherwise>
-           </xsl:choose>
-        </xsl:variable>
-        <table class="histogram">
-           <tbody>
-              <tr>
-                <xsl:for-each select="int">
-                   <td>
-                 <xsl:value-of select="."/>
-                 <div class="histogram">
-                  <xsl:attribute name="style">background-color: <xsl:value-of select="$fill"/>; width: <xsl:value-of select="$bar_width"/>px; height: <xsl:value-of select="($iheight*number(.)) div $max"/>px;</xsl:attribute>
-                 </div>
-                   </td>
-                </xsl:for-each>
-              </tr>
-              <tr>
-                <xsl:for-each select="int">
-                   <td>
-                       <xsl:value-of select="@name"/>
-                   </td>
-                </xsl:for-each>
-              </tr>
-           </tbody>
-        </table>
-    </xsl:template>
-    <xsl:template name="keyvalue">
-        <xsl:choose>
-            <xsl:when test="@name">
-                <tr>
-                    <td class="name">
-                        <xsl:value-of select="@name"/>
-                    </td>
-                    <td class="value">
-                        <xsl:value-of select="."/>
-                    </td>
-                </tr>
-            </xsl:when>
-            <xsl:otherwise>
-                <xsl:value-of select="."/>
-            </xsl:otherwise>
-        </xsl:choose>
-    </xsl:template>
-    <xsl:template match="int|bool|long|float|double|uuid|date">
-        <xsl:call-template name="keyvalue"/>
-    </xsl:template>
-    <xsl:template match="arr">
-        <tr>
-            <td class="name">
-                <xsl:value-of select="@name"/>
-            </td>
-            <td class="value">
-                <ul>
-                    <xsl:for-each select="child::*">
-                        <li>
-                            <xsl:apply-templates/>
-                        </li>
-                    </xsl:for-each>
-                </ul>
-            </td>
-        </tr>
-    </xsl:template>
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