htslib 0.2.2 → 0.2.5

data/lib/hts/tbx.rb

@@ -45,8 +45,6 @@ module HTS
 
       # build_index(index) if build_index
       @idx = load_index(index)
-
-      super # do nothing
     end
 
     def build_index
@@ -68,9 +66,7 @@ module HTS
     def seqnames
       nseq = FFI::MemoryPointer.new(:int)
       LibHTS.tbx_seqnames(@idx, nseq).then do |pts|
-        pts.read_array_of_pointer(nseq.read_int).map do |pt|
-          pt.read_string
-        end
+        pts.read_array_of_pointer(nseq.read_int).map(&:read_string)
       end
     end
   end

data/lib/hts/version.rb

@@ -1,5 +1,5 @@
 # frozen_string_literal: true
 
 module HTS
-  VERSION = "0.2.2"
+  VERSION = "0.2.5"
 end

data/lib/htslib.rb

@@ -30,14 +30,29 @@ module HTS
 
       warn "htslib shared library '#{name}' not found."
     end
+
+    def search_htslib_windows
+      ENV["HTSLIBDIR"] ||= [
+        RubyInstaller::Runtime.msys2_installation.msys_path,
+        RubyInstaller::Runtime.msys2_installation.mingwarch
+      ].join(File::ALT_SEPARATOR)
+      path = File.expand_path("bin/hts-3.dll", ENV["HTSLIBDIR"])
+      RubyInstaller::Runtime.add_dll_directory(File.dirname(path))
+      path
+    end
   end
 
-  self.lib_path = search_htslib
+  self.lib_path = if Object.const_defined?(:RubyInstaller)
+                    search_htslib_windows
+                  else
+                    search_htslib
+                  end
 
   # You can change the path of the shared library with `HTS.lib_path=`
   # before calling the LibHTS module.
   autoload :LibHTS, "hts/libhts"
 
+  autoload :Hts,    "hts/hts"
   autoload :Bam,    "hts/bam"
   autoload :Bcf,    "hts/bcf"
   autoload :Tbx,    "hts/tbx"

metadata

@@ -1,14 +1,14 @@
 --- !ruby/object:Gem::Specification
 name: htslib
 version: !ruby/object:Gem::Version
-  version: 0.2.2
+  version: 0.2.5
 platform: ruby
 authors:
 - kojix2
 autorequire: 
 bindir: bin
 cert_chain: []
-date: 2022-08-19 00:00:00.000000000 Z
+date: 2022-10-27 00:00:00.000000000 Z
 dependencies:
 - !ruby/object:Gem::Dependency
   name: ffi
@@ -132,10 +132,11 @@ files:
 - LICENSE.txt
 - README.md
 - lib/hts/bam.rb
-- lib/hts/bam/aux.rb
+- lib/hts/bam/auxi.rb
 - lib/hts/bam/cigar.rb
 - lib/hts/bam/flag.rb
 - lib/hts/bam/header.rb
+- lib/hts/bam/header_record.rb
 - lib/hts/bam/record.rb
 - lib/hts/bcf.rb
 - lib/hts/bcf/format.rb
@@ -169,7 +170,8 @@ files:
 homepage: https://github.com/kojix2/ruby-htslib
 licenses:
 - MIT
-metadata: {}
+metadata:
+  msys2_mingw_dependencies: htslib
 post_install_message: 
 rdoc_options: []
 require_paths: