honzasterba_xgb 0.9.0

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Files changed (41) hide show
  1. checksums.yaml +7 -0
  2. data/CHANGELOG.md +116 -0
  3. data/LICENSE.txt +202 -0
  4. data/NOTICE.txt +14 -0
  5. data/README.md +195 -0
  6. data/lib/xgb.rb +4 -0
  7. data/lib/xgboost/booster.rb +315 -0
  8. data/lib/xgboost/callback_container.rb +145 -0
  9. data/lib/xgboost/classifier.rb +53 -0
  10. data/lib/xgboost/cv_pack.rb +26 -0
  11. data/lib/xgboost/dmatrix.rb +274 -0
  12. data/lib/xgboost/early_stopping.rb +132 -0
  13. data/lib/xgboost/evaluation_monitor.rb +44 -0
  14. data/lib/xgboost/ffi.rb +56 -0
  15. data/lib/xgboost/model.rb +31 -0
  16. data/lib/xgboost/packed_booster.rb +51 -0
  17. data/lib/xgboost/ranker.rb +14 -0
  18. data/lib/xgboost/regressor.rb +20 -0
  19. data/lib/xgboost/training_callback.rb +23 -0
  20. data/lib/xgboost/utils.rb +33 -0
  21. data/lib/xgboost/version.rb +3 -0
  22. data/lib/xgboost.rb +196 -0
  23. data/vendor/aarch64-linux/LICENSE-dmlc-core.txt +201 -0
  24. data/vendor/aarch64-linux/LICENSE-xgboost.txt +201 -0
  25. data/vendor/aarch64-linux/libxgboost.so +0 -0
  26. data/vendor/arm64-darwin/LICENSE-dmlc-core.txt +201 -0
  27. data/vendor/arm64-darwin/LICENSE-xgboost.txt +201 -0
  28. data/vendor/arm64-darwin/libxgboost.dylib +0 -0
  29. data/vendor/x64-mingw/LICENSE-dmlc-core.txt +201 -0
  30. data/vendor/x64-mingw/LICENSE-xgboost.txt +201 -0
  31. data/vendor/x64-mingw/xgboost.dll +0 -0
  32. data/vendor/x86_64-darwin/LICENSE-dmlc-core.txt +201 -0
  33. data/vendor/x86_64-darwin/LICENSE-xgboost.txt +201 -0
  34. data/vendor/x86_64-darwin/libxgboost.dylib +0 -0
  35. data/vendor/x86_64-linux/LICENSE-dmlc-core.txt +201 -0
  36. data/vendor/x86_64-linux/LICENSE-xgboost.txt +201 -0
  37. data/vendor/x86_64-linux/libxgboost.so +0 -0
  38. data/vendor/x86_64-linux-musl/LICENSE-dmlc-core.txt +201 -0
  39. data/vendor/x86_64-linux-musl/LICENSE-xgboost.txt +201 -0
  40. data/vendor/x86_64-linux-musl/libxgboost.so +0 -0
  41. metadata +95 -0
data/lib/xgboost.rb ADDED
@@ -0,0 +1,196 @@
1
+ # dependencies
2
+ require "ffi"
3
+
4
+ # modules
5
+ require_relative "xgboost/utils"
6
+ require_relative "xgboost/booster"
7
+ require_relative "xgboost/callback_container"
8
+ require_relative "xgboost/cv_pack"
9
+ require_relative "xgboost/dmatrix"
10
+ require_relative "xgboost/packed_booster"
11
+ require_relative "xgboost/version"
12
+
13
+ # callbacks
14
+ require_relative "xgboost/training_callback"
15
+ require_relative "xgboost/early_stopping"
16
+ require_relative "xgboost/evaluation_monitor"
17
+
18
+ # scikit-learn API
19
+ require_relative "xgboost/model"
20
+ require_relative "xgboost/classifier"
21
+ require_relative "xgboost/ranker"
22
+ require_relative "xgboost/regressor"
23
+
24
+ module XGBoost
25
+ class Error < StandardError; end
26
+
27
+ class << self
28
+ attr_accessor :ffi_lib
29
+ end
30
+ lib_path =
31
+ if Gem.win_platform?
32
+ "x64-mingw/xgboost.dll"
33
+ elsif RbConfig::CONFIG["host_os"] =~ /darwin/i
34
+ if RbConfig::CONFIG["host_cpu"] =~ /arm|aarch64/i
35
+ "arm64-darwin/libxgboost.dylib"
36
+ else
37
+ "x86_64-darwin/libxgboost.dylib"
38
+ end
39
+ elsif RbConfig::CONFIG["host_os"] =~ /linux-musl/i
40
+ "x86_64-linux-musl/libxgboost.so"
41
+ else
42
+ if RbConfig::CONFIG["host_cpu"] =~ /arm|aarch64/i
43
+ "aarch64-linux/libxgboost.so"
44
+ else
45
+ "x86_64-linux/libxgboost.so"
46
+ end
47
+ end
48
+ vendor_lib = File.expand_path("../vendor/#{lib_path}", __dir__)
49
+ self.ffi_lib = [vendor_lib]
50
+
51
+ # friendlier error message
52
+ autoload :FFI, "xgboost/ffi"
53
+
54
+ class << self
55
+ def train(
56
+ params,
57
+ dtrain,
58
+ num_boost_round: 10,
59
+ evals: nil,
60
+ maximize: nil,
61
+ early_stopping_rounds: nil,
62
+ evals_result: nil,
63
+ verbose_eval: true,
64
+ callbacks: nil
65
+ )
66
+ callbacks = callbacks.nil? ? [] : callbacks.dup
67
+ evals ||= []
68
+
69
+ bst = Booster.new(params: params, cache: [dtrain] + evals.map { |d| d[0] })
70
+
71
+ if verbose_eval
72
+ verbose_eval = verbose_eval == true ? 1 : verbose_eval
73
+ callbacks << EvaluationMonitor.new(period: verbose_eval)
74
+ end
75
+ if early_stopping_rounds
76
+ callbacks << EarlyStopping.new(rounds: early_stopping_rounds, maximize: maximize)
77
+ end
78
+ cb_container = CallbackContainer.new(callbacks)
79
+
80
+ bst = cb_container.before_training(bst)
81
+
82
+ num_boost_round.times do |i|
83
+ break if cb_container.before_iteration(bst, i, dtrain, evals)
84
+ bst.update(dtrain, i)
85
+ break if cb_container.after_iteration(bst, i, dtrain, evals)
86
+ end
87
+
88
+ bst = cb_container.after_training(bst)
89
+
90
+ if !evals_result.nil?
91
+ evals_result.merge!(cb_container.history)
92
+ end
93
+
94
+ bst
95
+ end
96
+
97
+ def cv(
98
+ params,
99
+ dtrain,
100
+ num_boost_round: 10,
101
+ nfold: 3,
102
+ maximize: nil,
103
+ early_stopping_rounds: nil,
104
+ verbose_eval: nil,
105
+ show_stdv: true,
106
+ seed: 0,
107
+ callbacks: nil,
108
+ shuffle: true
109
+ )
110
+ results = {}
111
+ cvfolds =
112
+ mknfold(
113
+ dall: dtrain,
114
+ param: params,
115
+ nfold: nfold,
116
+ seed: seed,
117
+ shuffle: shuffle
118
+ )
119
+
120
+ callbacks = callbacks.nil? ? [] : callbacks.dup
121
+
122
+ if verbose_eval
123
+ verbose_eval = verbose_eval == true ? 1 : verbose_eval
124
+ callbacks << EvaluationMonitor.new(period: verbose_eval, show_stdv: show_stdv)
125
+ end
126
+ if early_stopping_rounds
127
+ callbacks << EarlyStopping.new(rounds: early_stopping_rounds, maximize: maximize)
128
+ end
129
+ callbacks_container = CallbackContainer.new(callbacks, is_cv: true)
130
+
131
+ booster = PackedBooster.new(cvfolds)
132
+ callbacks_container.before_training(booster)
133
+
134
+ num_boost_round.times do |i|
135
+ break if callbacks_container.before_iteration(booster, i, dtrain, nil)
136
+ booster.update(i)
137
+
138
+ should_break = callbacks_container.after_iteration(booster, i, dtrain, nil)
139
+ res = callbacks_container.aggregated_cv
140
+ res.each do |key, mean, std|
141
+ if !results.include?(key + "-mean")
142
+ results[key + "-mean"] = []
143
+ end
144
+ if !results.include?(key + "-std")
145
+ results[key + "-std"] = []
146
+ end
147
+ results[key + "-mean"] << mean
148
+ results[key + "-std"] << std
149
+ end
150
+
151
+ if should_break
152
+ results.keys.each do |k|
153
+ results[k] = results[k][..booster.best_iteration]
154
+ end
155
+ break
156
+ end
157
+ end
158
+
159
+ callbacks_container.after_training(booster)
160
+
161
+ results
162
+ end
163
+
164
+ def lib_version
165
+ major = ::FFI::MemoryPointer.new(:int)
166
+ minor = ::FFI::MemoryPointer.new(:int)
167
+ patch = ::FFI::MemoryPointer.new(:int)
168
+ FFI.XGBoostVersion(major, minor, patch)
169
+ "#{major.read_int}.#{minor.read_int}.#{patch.read_int}"
170
+ end
171
+
172
+ private
173
+
174
+ def mknfold(dall:, param:, nfold:, seed:, shuffle:)
175
+ rand_idx = (0...dall.num_row).to_a
176
+ rand_idx.shuffle!(random: Random.new(seed)) if shuffle
177
+
178
+ kstep = (rand_idx.size / nfold.to_f).ceil
179
+ out_idset = rand_idx.each_slice(kstep).to_a[0...nfold]
180
+ in_idset = []
181
+ nfold.times do |i|
182
+ idx = out_idset.dup
183
+ idx.delete_at(i)
184
+ in_idset << idx.flatten
185
+ end
186
+
187
+ ret = []
188
+ nfold.times do |k|
189
+ fold_dtrain = dall.slice(in_idset[k])
190
+ fold_dvalid = dall.slice(out_idset[k])
191
+ ret << CVPack.new(fold_dtrain, fold_dvalid, param)
192
+ end
193
+ ret
194
+ end
195
+ end
196
+ end
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