hnswlib 0.1.0

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+ /**
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+ * hnswlib.rb is a Ruby binding for the Hnswlib.
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+ *
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+ * Copyright (c) 2021 Atsushi Tatsuma
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+ *
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+ * Licensed under the Apache License, Version 2.0 (the "License");
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+ * you may not use this file except in compliance with the License.
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+ * You may obtain a copy of the License at
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+ *
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+ * http://www.apache.org/licenses/LICENSE-2.0
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+ *
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+ * Unless required by applicable law or agreed to in writing, software
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+ * distributed under the License is distributed on an "AS IS" BASIS,
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+ * WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
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+ * See the License for the specific language governing permissions and
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+ * limitations under the License.
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+ */
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+
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+ #ifndef HNSWLIBEXT_HPP
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+ #define HNSWLIBEXT_HPP 1
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+
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+ #include <ruby.h>
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+
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+ #include <hnswlib.h>
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+
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+ VALUE rb_cHnswlibL2Space;
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+ VALUE rb_cHnswlibInnerProductSpace;
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+ VALUE rb_cHnswlibHierarchicalNSW;
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+
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+ class RbHnswlibL2Space {
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+ public:
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+ static VALUE hnsw_l2space_alloc(VALUE self) {
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+ hnswlib::L2Space* ptr = (hnswlib::L2Space*)ruby_xmalloc(sizeof(hnswlib::L2Space));
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+ return TypedData_Wrap_Struct(self, &hnsw_l2space_type, ptr);
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+ };
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+
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+ static void hnsw_l2space_free(void* ptr) {
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+ ((hnswlib::L2Space*)ptr)->~L2Space();
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+ ruby_xfree(ptr);
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+ };
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+
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+ static size_t hnsw_l2space_size(const void* ptr) {
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+ return sizeof(*((hnswlib::L2Space*)ptr));
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+ };
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+
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+ static hnswlib::L2Space* get_hnsw_l2space(VALUE self) {
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+ hnswlib::L2Space* ptr;
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+ TypedData_Get_Struct(self, hnswlib::L2Space, &hnsw_l2space_type, ptr);
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+ return ptr;
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+ };
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+
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+ static VALUE define_class(VALUE rb_mHnswlib) {
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+ rb_cHnswlibL2Space = rb_define_class_under(rb_mHnswlib, "L2Space", rb_cObject);
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+ rb_define_alloc_func(rb_cHnswlibL2Space, hnsw_l2space_alloc);
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+ rb_define_method(rb_cHnswlibL2Space, "initialize", RUBY_METHOD_FUNC(_hnsw_l2space_init), 1);
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+ rb_define_method(rb_cHnswlibL2Space, "distance", RUBY_METHOD_FUNC(_hnsw_l2space_distance), 2);
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+ rb_define_attr(rb_cHnswlibL2Space, "dim", 1, 0);
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+ return rb_cHnswlibL2Space;
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+ };
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+
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+ private:
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+ static const rb_data_type_t hnsw_l2space_type;
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+
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+ static VALUE _hnsw_l2space_init(VALUE self, VALUE dim) {
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+ rb_iv_set(self, "@dim", dim);
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+ hnswlib::L2Space* ptr = get_hnsw_l2space(self);
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+ new (ptr) hnswlib::L2Space(NUM2INT(rb_iv_get(self, "@dim")));
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+ return Qnil;
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+ };
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+
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+ static VALUE _hnsw_l2space_distance(VALUE self, VALUE arr_a, VALUE arr_b) {
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+ const int dim = NUM2INT(rb_iv_get(self, "@dim"));
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+ if (dim != RARRAY_LEN(arr_a) || dim != RARRAY_LEN(arr_b)) {
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+ rb_raise(rb_eArgError, "Array size does not match to space dimensionality.");
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+ return Qnil;
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+ }
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+ float* vec_a = (float*)ruby_xmalloc(dim * sizeof(float));
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+ for (int i = 0; i < dim; i++) {
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+ vec_a[i] = (float)NUM2DBL(rb_ary_entry(arr_a, i));
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+ }
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+ float* vec_b = (float*)ruby_xmalloc(dim * sizeof(float));
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+ for (int i = 0; i < dim; i++) {
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+ vec_b[i] = (float)NUM2DBL(rb_ary_entry(arr_b, i));
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+ }
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+ hnswlib::DISTFUNC<float> dist_func = get_hnsw_l2space(self)->get_dist_func();
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+ const float dist = dist_func(vec_a, vec_b, get_hnsw_l2space(self)->get_dist_func_param());
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+ ruby_xfree(vec_a);
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+ ruby_xfree(vec_b);
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+ return DBL2NUM((double)dist);
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+ };
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+ };
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+
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+ const rb_data_type_t RbHnswlibL2Space::hnsw_l2space_type = {
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+ "RbHnswlibL2Space",
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+ {
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+ NULL,
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+ RbHnswlibL2Space::hnsw_l2space_free,
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+ RbHnswlibL2Space::hnsw_l2space_size
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+ },
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+ NULL,
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+ NULL,
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+ RUBY_TYPED_FREE_IMMEDIATELY
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+ };
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+
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+ class RbHnswlibInnerProductSpace {
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+ public:
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+ static VALUE hnsw_ipspace_alloc(VALUE self) {
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+ hnswlib::InnerProductSpace* ptr = (hnswlib::InnerProductSpace*)ruby_xmalloc(sizeof(hnswlib::InnerProductSpace));
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+ return TypedData_Wrap_Struct(self, &hnsw_ipspace_type, ptr);
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+ };
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+
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+ static void hnsw_ipspace_free(void* ptr) {
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+ ((hnswlib::InnerProductSpace*)ptr)->~InnerProductSpace();
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+ ruby_xfree(ptr);
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+ };
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+
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+ static size_t hnsw_ipspace_size(const void* ptr) {
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+ return sizeof(*((hnswlib::InnerProductSpace*)ptr));
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+ };
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+
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+ static hnswlib::InnerProductSpace* get_hnsw_ipspace(VALUE self) {
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+ hnswlib::InnerProductSpace* ptr;
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+ TypedData_Get_Struct(self, hnswlib::InnerProductSpace, &hnsw_ipspace_type, ptr);
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+ return ptr;
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+ };
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+
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+ static VALUE define_class(VALUE rb_mHnswlib) {
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+ rb_cHnswlibInnerProductSpace = rb_define_class_under(rb_mHnswlib, "InnerProductSpace", rb_cObject);
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+ rb_define_alloc_func(rb_cHnswlibInnerProductSpace, hnsw_ipspace_alloc);
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+ rb_define_method(rb_cHnswlibInnerProductSpace, "initialize", RUBY_METHOD_FUNC(_hnsw_ipspace_init), 1);
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+ rb_define_method(rb_cHnswlibInnerProductSpace, "distance", RUBY_METHOD_FUNC(_hnsw_ipspace_distance), 2);
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+ rb_define_attr(rb_cHnswlibInnerProductSpace, "dim", 1, 0);
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+ return rb_cHnswlibInnerProductSpace;
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+ };
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+
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+ private:
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+ static const rb_data_type_t hnsw_ipspace_type;
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+
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+ static VALUE _hnsw_ipspace_init(VALUE self, VALUE dim) {
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+ rb_iv_set(self, "@dim", dim);
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+ hnswlib::InnerProductSpace* ptr = get_hnsw_ipspace(self);
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+ new (ptr) hnswlib::InnerProductSpace(NUM2INT(rb_iv_get(self, "@dim")));
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+ return Qnil;
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+ };
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+
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+ static VALUE _hnsw_ipspace_distance(VALUE self, VALUE arr_a, VALUE arr_b) {
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+ const int dim = NUM2INT(rb_iv_get(self, "@dim"));
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+ if (dim != RARRAY_LEN(arr_a) || dim != RARRAY_LEN(arr_b)) {
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+ rb_raise(rb_eArgError, "Array size does not match to space dimensionality.");
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+ return Qnil;
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+ }
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+ float* vec_a = (float*)ruby_xmalloc(dim * sizeof(float));
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+ for (int i = 0; i < dim; i++) {
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+ vec_a[i] = (float)NUM2DBL(rb_ary_entry(arr_a, i));
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+ }
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+ float* vec_b = (float*)ruby_xmalloc(dim * sizeof(float));
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+ for (int i = 0; i < dim; i++) {
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+ vec_b[i] = (float)NUM2DBL(rb_ary_entry(arr_b, i));
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+ }
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+ hnswlib::DISTFUNC<float> dist_func = get_hnsw_ipspace(self)->get_dist_func();
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+ const float dist = dist_func(vec_a, vec_b, get_hnsw_ipspace(self)->get_dist_func_param());
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+ ruby_xfree(vec_a);
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+ ruby_xfree(vec_b);
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+ return DBL2NUM((double)dist);
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+ };
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+ };
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+
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+ const rb_data_type_t RbHnswlibInnerProductSpace::hnsw_ipspace_type = {
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+ "RbHnswlibInnerProductSpace",
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+ {
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+ NULL,
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+ RbHnswlibInnerProductSpace::hnsw_ipspace_free,
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+ RbHnswlibInnerProductSpace::hnsw_ipspace_size
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+ },
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+ NULL,
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+ NULL,
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+ RUBY_TYPED_FREE_IMMEDIATELY
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+ };
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+
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+ class RbHnswlibHierarchicalNSW {
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+ public:
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+ static VALUE hnsw_hierarchicalnsw_alloc(VALUE self) {
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+ hnswlib::HierarchicalNSW<float>* ptr = (hnswlib::HierarchicalNSW<float>*)ruby_xmalloc(sizeof(hnswlib::HierarchicalNSW<float>));
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+ return TypedData_Wrap_Struct(self, &hnsw_hierarchicalnsw_type, ptr);
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+ };
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+
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+ static void hnsw_hierarchicalnsw_free(void* ptr) {
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+ ((hnswlib::HierarchicalNSW<float>*)ptr)->~HierarchicalNSW();
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+ ruby_xfree(ptr);
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+ };
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+
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+ static size_t hnsw_hierarchicalnsw_size(const void* ptr) {
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+ return sizeof(*((hnswlib::HierarchicalNSW<float>*)ptr));
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+ };
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+
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+ static hnswlib::HierarchicalNSW<float>* get_hnsw_hierarchicalnsw(VALUE self) {
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+ hnswlib::HierarchicalNSW<float>* ptr;
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+ TypedData_Get_Struct(self, hnswlib::HierarchicalNSW<float>, &hnsw_hierarchicalnsw_type, ptr);
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+ return ptr;
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+ };
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+
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+ static VALUE define_class(VALUE rb_mHnswlib) {
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+ rb_cHnswlibHierarchicalNSW = rb_define_class_under(rb_mHnswlib, "HierarchicalNSW", rb_cObject);
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+ rb_define_alloc_func(rb_cHnswlibHierarchicalNSW, hnsw_hierarchicalnsw_alloc);
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+ rb_define_method(rb_cHnswlibHierarchicalNSW, "initialize", RUBY_METHOD_FUNC(_hnsw_hierarchicalnsw_init), -1);
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+ rb_define_method(rb_cHnswlibHierarchicalNSW, "add_point", RUBY_METHOD_FUNC(_hnsw_hierarchicalnsw_add_point), 2);
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+ rb_define_method(rb_cHnswlibHierarchicalNSW, "search_knn", RUBY_METHOD_FUNC(_hnsw_hierarchicalnsw_search_knn), 2);
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+ rb_define_method(rb_cHnswlibHierarchicalNSW, "save_index", RUBY_METHOD_FUNC(_hnsw_hierarchicalnsw_save_index), 1);
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+ rb_define_method(rb_cHnswlibHierarchicalNSW, "load_index", RUBY_METHOD_FUNC(_hnsw_hierarchicalnsw_load_index), 1);
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+ rb_define_method(rb_cHnswlibHierarchicalNSW, "get_point", RUBY_METHOD_FUNC(_hnsw_hierarchicalnsw_get_point), 1);
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+ rb_define_method(rb_cHnswlibHierarchicalNSW, "get_ids", RUBY_METHOD_FUNC(_hnsw_hierarchicalnsw_get_ids), 0);
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+ rb_define_method(rb_cHnswlibHierarchicalNSW, "mark_deleted", RUBY_METHOD_FUNC(_hnsw_hierarchicalnsw_mark_deleted), 1);
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+ rb_define_method(rb_cHnswlibHierarchicalNSW, "resize_index", RUBY_METHOD_FUNC(_hnsw_hierarchicalnsw_resize_index), 1);
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+ rb_define_method(rb_cHnswlibHierarchicalNSW, "set_ef", RUBY_METHOD_FUNC(_hnsw_hierarchicalnsw_set_ef), 1);
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+ rb_define_method(rb_cHnswlibHierarchicalNSW, "max_elements", RUBY_METHOD_FUNC(_hnsw_hierarchicalnsw_max_elements), 0);
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+ rb_define_method(rb_cHnswlibHierarchicalNSW, "current_count", RUBY_METHOD_FUNC(_hnsw_hierarchicalnsw_current_count), 0);
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+ rb_define_attr(rb_cHnswlibHierarchicalNSW, "space", 1, 0);
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+ return rb_cHnswlibHierarchicalNSW;
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+ };
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+
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+ private:
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+ static const rb_data_type_t hnsw_hierarchicalnsw_type;
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+
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+ static VALUE _hnsw_hierarchicalnsw_init(int argc, VALUE* argv, VALUE self) {
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+ VALUE kw_args = Qnil;
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+ ID kw_table[5] = {
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+ rb_intern("space"),
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+ rb_intern("max_elements"),
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+ rb_intern("m"),
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+ rb_intern("ef_construction"),
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+ rb_intern("random_seed")
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+ };
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+ VALUE kw_values[5] = {
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+ Qundef, Qundef, Qundef, Qundef, Qundef
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+ };
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+ rb_scan_args(argc, argv, ":", &kw_args);
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+ rb_get_kwargs(kw_args, kw_table, 2, 3, kw_values);
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+ if (kw_values[2] == Qundef) kw_values[2] = INT2NUM(16);
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+ if (kw_values[3] == Qundef) kw_values[3] = INT2NUM(200);
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+ if (kw_values[4] == Qundef) kw_values[4] = INT2NUM(100);
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+
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+ rb_iv_set(self, "@space", kw_values[0]);
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+ hnswlib::SpaceInterface<float>* space;
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+ if (CLASS_OF(kw_values[0]) == rb_cHnswlibL2Space) {
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+ space = RbHnswlibL2Space::get_hnsw_l2space(kw_values[0]);
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+ } else {
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+ space = RbHnswlibInnerProductSpace::get_hnsw_ipspace(kw_values[0]);
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+ }
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+ const size_t max_elements = (size_t)NUM2INT(kw_values[1]);
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+ const size_t m = (size_t)NUM2INT(kw_values[2]);
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+ const size_t ef_construction = (size_t)NUM2INT(kw_values[3]);
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+ const size_t random_seed = (size_t)NUM2INT(kw_values[4]);
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+
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+ hnswlib::HierarchicalNSW<float>* ptr = get_hnsw_hierarchicalnsw(self);
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+ new (ptr) hnswlib::HierarchicalNSW<float>(space, max_elements, m, ef_construction, random_seed);
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+
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+ return Qnil;
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+ };
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+
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+ static VALUE _hnsw_hierarchicalnsw_add_point(VALUE self, VALUE arr, VALUE idx) {
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+ const int dim = NUM2INT(rb_iv_get(rb_iv_get(self, "@space"), "@dim"));
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+
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+ if (!RB_TYPE_P(arr, T_ARRAY)) {
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+ rb_raise(rb_eArgError, "Expect point vector to be Ruby Array.");
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+ return Qfalse;
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+ }
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+
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+ if (!RB_INTEGER_TYPE_P(idx)) {
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+ rb_raise(rb_eArgError, "Expect index to be Ruby Integer.");
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+ return Qfalse;
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+ }
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+
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+ if (dim != RARRAY_LEN(arr)) {
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+ rb_raise(rb_eArgError, "Array size does not match to index dimensionality.");
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+ return Qfalse;
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+ }
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+
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+ float* vec = (float*)ruby_xmalloc(dim * sizeof(float));
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+ for (int i = 0; i < dim; i++) {
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+ vec[i] = (float)NUM2DBL(rb_ary_entry(arr, i));
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+ }
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+
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+ get_hnsw_hierarchicalnsw(self)->addPoint((void *)vec, (size_t)NUM2INT(idx));
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+
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+ ruby_xfree(vec);
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+ return Qtrue;
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+ };
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+
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+ static VALUE _hnsw_hierarchicalnsw_search_knn(VALUE self, VALUE arr, VALUE k) {
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+ const int dim = NUM2INT(rb_iv_get(rb_iv_get(self, "@space"), "@dim"));
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+
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+ if (!RB_TYPE_P(arr, T_ARRAY)) {
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+ rb_raise(rb_eArgError, "Expect query vector to be Ruby Array.");
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+ return Qnil;
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+ }
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+
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+ if (!RB_INTEGER_TYPE_P(k)) {
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+ rb_raise(rb_eArgError, "Expect the number of nearest neighbors to be Ruby Integer.");
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+ return Qnil;
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+ }
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+
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+ if (dim != RARRAY_LEN(arr)) {
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+ rb_raise(rb_eArgError, "Array size does not match to index dimensionality.");
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+ return Qnil;
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+ }
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+
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+ float* vec = (float*)ruby_xmalloc(dim * sizeof(float));
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+ for (int i = 0; i < dim; i++) {
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+ vec[i] = (float)NUM2DBL(rb_ary_entry(arr, i));
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+ }
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+
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+ std::priority_queue<std::pair<float, size_t>> result =
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+ get_hnsw_hierarchicalnsw(self)->searchKnn((void *)vec, (size_t)NUM2INT(k));
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+
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+ ruby_xfree(vec);
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+
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+ if (result.size() != (size_t)NUM2INT(k)) {
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+ rb_raise(rb_eRuntimeError, "Cannot return the results in a contigious 2D array. Probably ef or M is too small.");
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+ return Qnil;
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+ }
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+
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+ VALUE distances_arr = rb_ary_new2(result.size());
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+ VALUE neighbors_arr = rb_ary_new2(result.size());
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+
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+ for (int i = NUM2INT(k) - 1; i >= 0; i--) {
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+ const std::pair<float, size_t>& result_tuple = result.top();
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+ rb_ary_store(distances_arr, i, DBL2NUM((double)result_tuple.first));
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+ rb_ary_store(neighbors_arr, i, INT2NUM((int)result_tuple.second));
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+ result.pop();
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+ }
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+
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+ VALUE ret = rb_ary_new2(2);
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+ rb_ary_store(ret, 0, neighbors_arr);
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+ rb_ary_store(ret, 1, distances_arr);
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+ return ret;
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+ };
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+
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+ static VALUE _hnsw_hierarchicalnsw_save_index(VALUE self, VALUE _filename) {
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+ std::string filename(StringValuePtr(_filename));
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+ get_hnsw_hierarchicalnsw(self)->saveIndex(filename);
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+ RB_GC_GUARD(_filename);
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+ return Qnil;
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+ };
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+
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+ static VALUE _hnsw_hierarchicalnsw_load_index(VALUE self, VALUE _filename) {
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+ std::string filename(StringValuePtr(_filename));
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+ hnswlib::SpaceInterface<float>* space;
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+ if (CLASS_OF(rb_iv_get(self, "@space")) == rb_cHnswlibL2Space) {
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+ space = RbHnswlibL2Space::get_hnsw_l2space(rb_iv_get(self, "@space"));
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+ } else {
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+ space = RbHnswlibInnerProductSpace::get_hnsw_ipspace(rb_iv_get(self, "@space"));
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+ }
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+ get_hnsw_hierarchicalnsw(self)->loadIndex(filename, space);
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+ RB_GC_GUARD(_filename);
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+ return Qnil;
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+ };
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+
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+ static VALUE _hnsw_hierarchicalnsw_get_point(VALUE self, VALUE idx) {
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+ VALUE ret = Qnil;
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+ try {
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+ std::vector<float> vec = get_hnsw_hierarchicalnsw(self)->template getDataByLabel<float>((size_t)NUM2INT(idx));
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+ ret = rb_ary_new2(vec.size());
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+ for (size_t i = 0; i < vec.size(); i++) {
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+ rb_ary_store(ret, i, DBL2NUM((double)vec[i]));
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+ }
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+ } catch(std::runtime_error const& e) {
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+ rb_raise(rb_eRuntimeError, "%s", e.what());
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+ }
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+ return ret;
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+ };
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+
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+ static VALUE _hnsw_hierarchicalnsw_get_ids(VALUE self) {
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+ VALUE ret = rb_ary_new();
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+ for (auto kv : get_hnsw_hierarchicalnsw(self)->label_lookup_) {
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+ rb_ary_push(ret, INT2NUM((int)kv.first));
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+ }
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+ return ret;
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+ };
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+
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+ static VALUE _hnsw_hierarchicalnsw_mark_deleted(VALUE self, VALUE idx) {
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+ get_hnsw_hierarchicalnsw(self)->markDelete((size_t)NUM2INT(idx));
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+ return Qnil;
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+ };
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+
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+ static VALUE _hnsw_hierarchicalnsw_resize_index(VALUE self, VALUE new_max_elements) {
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+ if ((size_t)NUM2INT(new_max_elements) < get_hnsw_hierarchicalnsw(self)->cur_element_count) {
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+ rb_raise(rb_eArgError, "Cannot resize, max element is less than the current number of elements.");
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+ return Qnil;
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+ }
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+ get_hnsw_hierarchicalnsw(self)->resizeIndex((size_t)NUM2INT(new_max_elements));
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+ return Qnil;
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+ };
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+
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+ static VALUE _hnsw_hierarchicalnsw_set_ef(VALUE self, VALUE ef) {
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+ get_hnsw_hierarchicalnsw(self)->ef_ = (size_t)NUM2INT(ef);
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+ return Qnil;
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+ };
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+
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+ static VALUE _hnsw_hierarchicalnsw_max_elements(VALUE self) {
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+ return INT2NUM((int)(get_hnsw_hierarchicalnsw(self)->max_elements_));
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+ };
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+
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+ static VALUE _hnsw_hierarchicalnsw_current_count(VALUE self) {
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+ return INT2NUM((int)(get_hnsw_hierarchicalnsw(self)->cur_element_count));
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+ };
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+ };
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+
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+ const rb_data_type_t RbHnswlibHierarchicalNSW::hnsw_hierarchicalnsw_type = {
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+ "RbHnswlibHierarchicalNSW",
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+ {
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+ NULL,
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+ RbHnswlibHierarchicalNSW::hnsw_hierarchicalnsw_free,
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+ RbHnswlibHierarchicalNSW::hnsw_hierarchicalnsw_size
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+ },
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+ NULL,
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+ NULL,
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+ RUBY_TYPED_FREE_IMMEDIATELY
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+ };
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+
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+ #endif /* HNSWLIBEXT_HPP */
@@ -0,0 +1,201 @@
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+ Apache License
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+ Version 2.0, January 2004
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+ http://www.apache.org/licenses/
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+
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+ TERMS AND CONDITIONS FOR USE, REPRODUCTION, AND DISTRIBUTION
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+
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+ 1. Definitions.
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+
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+ "License" shall mean the terms and conditions for use, reproduction,
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+ and distribution as defined by Sections 1 through 9 of this document.
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+
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+ "Licensor" shall mean the copyright owner or entity authorized by
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+ the copyright owner that is granting the License.
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