his_emr_api_lab 1.0.0 → 1.0.1
This diff represents the content of publicly available package versions that have been released to one of the supported registries. The information contained in this diff is provided for informational purposes only and reflects changes between package versions as they appear in their respective public registries.
- checksums.yaml +4 -4
- data/app/services/lab/lims/order_serializer.rb +22 -7
- data/lib/lab/version.rb +1 -1
- metadata +2 -2
checksums.yaml
CHANGED
@@ -1,7 +1,7 @@
|
|
1
1
|
---
|
2
2
|
SHA256:
|
3
|
-
metadata.gz:
|
4
|
-
data.tar.gz:
|
3
|
+
metadata.gz: 1469d458b5c92b2b7fe0e9a930ce1671d83e1b0992f6e71adcda1e3893cee831
|
4
|
+
data.tar.gz: 370aa6b191193791ce6e9e913635a124ef71cb57d865f75b1b332f2ab027e5d1
|
5
5
|
SHA512:
|
6
|
-
metadata.gz:
|
7
|
-
data.tar.gz:
|
6
|
+
metadata.gz: 2c1fec86c5267d23f6ed657a86a5d59a36e94996e850550dd3e0d8185e5668f98c1e15c30b4a794ec551083141af50ffebc7041094ecb6a9e41b6871cd38badf
|
7
|
+
data.tar.gz: 56c0018c64eee53e5227f234de141de0f23873bfe1f170cec0b837cce995a935e1b743852794204cbd641fa07f79531b424219eee63a41f1492c6cd9254fbed7
|
@@ -18,7 +18,7 @@ module Lab
|
|
18
18
|
tracking_number: serialized_order.accession_number,
|
19
19
|
sending_facility: current_facility_name,
|
20
20
|
receiving_facility: serialized_order.target_lab,
|
21
|
-
tests: serialized_order.tests.
|
21
|
+
tests: serialized_order.tests.map { |test| format_test_name(test.name) },
|
22
22
|
patient: format_patient(serialized_order.patient_id),
|
23
23
|
order_location: format_order_location(serialized_order.encounter_id),
|
24
24
|
sample_type: format_sample_type(serialized_order.specimen.name),
|
@@ -27,7 +27,7 @@ module Lab
|
|
27
27
|
test_statuses: format_test_status_trail(order),
|
28
28
|
who_order_test: format_orderer(order),
|
29
29
|
districy: current_district, # yes districy [sic]...
|
30
|
-
priority: serialized_order.reason_for_test.name,
|
30
|
+
priority: format_sample_priority(serialized_order.reason_for_test.name),
|
31
31
|
date_created: serialized_order.order_date,
|
32
32
|
test_results: format_test_results(serialized_order),
|
33
33
|
type: 'Order'
|
@@ -69,7 +69,7 @@ module Lab
|
|
69
69
|
end
|
70
70
|
|
71
71
|
def format_sample_type(name)
|
72
|
-
name.casecmp?('Unknown') ? 'not_specified' : name
|
72
|
+
name.casecmp?('Unknown') ? 'not_specified' : name.titleize
|
73
73
|
end
|
74
74
|
|
75
75
|
def format_sample_status(name)
|
@@ -98,8 +98,7 @@ module Lab
|
|
98
98
|
|
99
99
|
def format_test_status_trail(order)
|
100
100
|
order.tests.each_with_object({}) do |test, trail|
|
101
|
-
test_name = ConceptName.find_by_concept_id!(test.value_coded).name
|
102
|
-
test_name = 'Viral load' if test_name.casecmp?('HIV Viral Load')
|
101
|
+
test_name = format_test_name(ConceptName.find_by_concept_id!(test.value_coded).name)
|
103
102
|
|
104
103
|
current_test_trail = trail[test_name] = {}
|
105
104
|
|
@@ -125,9 +124,11 @@ module Lab
|
|
125
124
|
order.tests&.each_with_object({}) do |test, results|
|
126
125
|
next unless test.result
|
127
126
|
|
128
|
-
results[test.name] = {
|
127
|
+
results[format_test_name(test.name)] = {
|
129
128
|
results: test.result.each_with_object({}) do |measure, measures|
|
130
|
-
measures[measure.indicator.name] = {
|
129
|
+
measures[format_test_name(measure.indicator.name)] = {
|
130
|
+
result_value: "#{measure.value_modifier}#{measure.value}"
|
131
|
+
}
|
131
132
|
end,
|
132
133
|
result_date: test.result.first&.date,
|
133
134
|
result_entered_by: {}
|
@@ -135,6 +136,20 @@ module Lab
|
|
135
136
|
end
|
136
137
|
end
|
137
138
|
|
139
|
+
def format_test_name(test_name)
|
140
|
+
return 'Viral Load' if test_name.casecmp?('HIV Viral load')
|
141
|
+
|
142
|
+
return 'TB' if test_name.name.casecmp?('TB Program')
|
143
|
+
|
144
|
+
test_name.titleize
|
145
|
+
end
|
146
|
+
|
147
|
+
def format_sample_priority(priority)
|
148
|
+
return 'Routine' if priority&.casecmp?('Medical examination, routine')
|
149
|
+
|
150
|
+
priority&.titleize
|
151
|
+
end
|
152
|
+
|
138
153
|
def current_health_center
|
139
154
|
health_center = Location.current_health_center
|
140
155
|
raise 'Current health center not set' unless health_center
|
data/lib/lab/version.rb
CHANGED
metadata
CHANGED
@@ -1,14 +1,14 @@
|
|
1
1
|
--- !ruby/object:Gem::Specification
|
2
2
|
name: his_emr_api_lab
|
3
3
|
version: !ruby/object:Gem::Version
|
4
|
-
version: 1.0.
|
4
|
+
version: 1.0.1
|
5
5
|
platform: ruby
|
6
6
|
authors:
|
7
7
|
- Elizabeth Glaser Pediatric Foundation Malawi
|
8
8
|
autorequire:
|
9
9
|
bindir: bin
|
10
10
|
cert_chain: []
|
11
|
-
date: 2021-06-
|
11
|
+
date: 2021-06-07 00:00:00.000000000 Z
|
12
12
|
dependencies:
|
13
13
|
- !ruby/object:Gem::Dependency
|
14
14
|
name: couchrest
|