helma-opentox-ruby-api-wrapper 0.1.1 → 0.1.2
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- data/VERSION +1 -1
- data/lib/opentox-ruby-api-wrapper.rb +9 -4
- data/opentox-ruby-api-wrapper.gemspec +1 -1
- metadata +1 -1
data/VERSION
CHANGED
@@ -1 +1 @@
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1
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-
0.1.
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1
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+
0.1.2
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@@ -1,6 +1,11 @@
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1
1
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require 'rest_client'
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2
2
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require 'crack/xml'
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3
3
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4
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+
ENV['OPENTOX_COMPOUND'] = 'http://webservices.in-silico.ch/compound/v0/' unless ENV['OPENTOX_COMPOUND']
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5
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+
ENV['OPENTOX_FEATURE'] = 'http://webservices.in-silico.ch/feature/v0/' unless ENV['OPENTOX_FEATURE']
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6
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+
ENV['OPENTOX_DATASET'] = 'http://webservices.in-silico.ch/dataset/v0/' unless ENV['OPENTOX_DATASET']
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7
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+
ENV['OPENTOX_FMINER'] = 'http://webservices.in-silico.ch/fminer/v0/' unless ENV['OPENTOX_FMINER']
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8
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+
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4
9
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module OpenTox
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10
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11
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class OpenTox
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@@ -19,9 +24,9 @@ module OpenTox
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24
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if params[:uri]
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@uri = params[:uri].to_s
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elsif params[:smiles]
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22
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-
@uri = RestClient.post ENV['
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27
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+
@uri = RestClient.post ENV['OPENTOX_COMPOUND'] ,:smiles => uri_escape(params[:smiles])
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elsif params[:name]
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24
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-
@uri = RestClient.post ENV['
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+
@uri = RestClient.post ENV['OPENTOX_COMPOUND'] ,:name => uri_escape(params[:name])
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end
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end
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@@ -53,7 +58,7 @@ module OpenTox
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if params[:uri]
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@uri = params[:uri].to_s
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else
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-
@uri = ENV['
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61
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+
@uri = ENV['OPENTOX_FEATURE'] + uri_escape(params[:name])
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params[:values].each do |k,v|
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@uri += '/' + k.to_s + '/' + v.to_s
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end
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@@ -79,7 +84,7 @@ module OpenTox
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if params[:uri]
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@uri = params[:uri].to_s
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elsif params[:name]
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82
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-
@uri = RestClient.post ENV['
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87
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+
@uri = RestClient.post ENV['OPENTOX_DATASET'], :name => params[:name]
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RestClient.delete @uri + '/associations'
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end
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85
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end
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