health-data-standards 3.1.1 → 3.2.0
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- data/Rakefile +2 -8
- data/lib/health-data-standards.rb +4 -2
- data/lib/health-data-standards/export/hdata/metadata.rb +2 -2
- data/lib/health-data-standards/export/helper/cat1_view_helper.rb +7 -101
- data/lib/health-data-standards/export/helper/html_view_helper.rb +2 -0
- data/lib/health-data-standards/export/helper/scooped_view_helper.rb +109 -0
- data/lib/health-data-standards/export/html.rb +2 -2
- data/lib/health-data-standards/export/qrda/entry_template_resolver.rb +29 -5
- data/lib/health-data-standards/export/view_helper.rb +2 -2
- data/lib/health-data-standards/import/bundle/importer.rb +8 -2
- data/lib/health-data-standards/import/cda/result_importer.rb +5 -0
- data/lib/health-data-standards/import/hdata/metadata_importer.rb +1 -1
- data/lib/health-data-standards/models/condition.rb +5 -0
- data/lib/health-data-standards/models/cqm/measure.rb +118 -1
- data/lib/health-data-standards/models/cqm/patient_cache.rb +60 -0
- data/lib/health-data-standards/models/encounter.rb +11 -0
- data/lib/health-data-standards/models/entry.rb +8 -0
- data/lib/health-data-standards/models/facility.rb +5 -0
- data/lib/health-data-standards/models/fulfillment_history.rb +4 -0
- data/lib/health-data-standards/models/guarantor.rb +5 -0
- data/lib/health-data-standards/models/insurance_provider.rb +10 -0
- data/lib/health-data-standards/models/medical_equipment.rb +5 -0
- data/lib/health-data-standards/models/medication.rb +11 -0
- data/lib/health-data-standards/models/order_information.rb +6 -0
- data/lib/health-data-standards/models/procedure.rb +5 -0
- data/lib/health-data-standards/models/provider_performance.rb +5 -0
- data/lib/health-data-standards/models/record.rb +16 -0
- data/lib/health-data-standards/models/thing_with_codes.rb +35 -5
- data/lib/health-data-standards/util/code_system_helper.rb +12 -3
- data/lib/hqmf-model/data_criteria.json +2 -2
- data/lib/hqmf-model/document.rb +9 -2
- data/lib/hqmf-parser/1.0/document.rb +6 -1
- data/templates/_author.hdata.erb +3 -0
- data/templates/_pedigree.hdata.erb +16 -15
- data/templates/cat1/_2.16.840.1.113883.10.20.22.4.85.cat1.erb +1 -0
- data/templates/cat1/_2.16.840.1.113883.10.20.24.3.1.cat1.erb +1 -1
- data/templates/cat1/_2.16.840.1.113883.10.20.24.3.103.cat1.erb +1 -1
- data/templates/cat1/_2.16.840.1.113883.10.20.24.3.105.cat1.erb +1 -1
- data/templates/cat1/_2.16.840.1.113883.10.20.24.3.11.cat1.erb +1 -1
- data/templates/cat1/_2.16.840.1.113883.10.20.24.3.12.cat1.erb +1 -1
- data/templates/cat1/_2.16.840.1.113883.10.20.24.3.13.cat1.erb +1 -1
- data/templates/cat1/_2.16.840.1.113883.10.20.24.3.14.cat1.erb +1 -1
- data/templates/cat1/_2.16.840.1.113883.10.20.24.3.17.cat1.erb +1 -1
- data/templates/cat1/_2.16.840.1.113883.10.20.24.3.18.cat1.erb +2 -2
- data/templates/cat1/_2.16.840.1.113883.10.20.24.3.2.cat1.erb +2 -1
- data/templates/cat1/_2.16.840.1.113883.10.20.24.3.20.cat1.erb +2 -2
- data/templates/cat1/_2.16.840.1.113883.10.20.24.3.22.cat1.erb +1 -1
- data/templates/cat1/_2.16.840.1.113883.10.20.24.3.23.cat1.erb +1 -1
- data/templates/cat1/_2.16.840.1.113883.10.20.24.3.28.cat1.erb +2 -2
- data/templates/cat1/_2.16.840.1.113883.10.20.24.3.3.cat1.erb +3 -2
- data/templates/cat1/_2.16.840.1.113883.10.20.24.3.31.cat1.erb +1 -1
- data/templates/cat1/_2.16.840.1.113883.10.20.24.3.32.cat1.erb +1 -1
- data/templates/cat1/_2.16.840.1.113883.10.20.24.3.34.cat1.erb +2 -2
- data/templates/cat1/_2.16.840.1.113883.10.20.24.3.37.cat1.erb +1 -1
- data/templates/cat1/_2.16.840.1.113883.10.20.24.3.38.cat1.erb +1 -1
- data/templates/cat1/_2.16.840.1.113883.10.20.24.3.4.cat1.erb +1 -1
- data/templates/cat1/_2.16.840.1.113883.10.20.24.3.40.cat1.erb +2 -2
- data/templates/cat1/_2.16.840.1.113883.10.20.24.3.41.cat1.erb +1 -1
- data/templates/cat1/_2.16.840.1.113883.10.20.24.3.42.cat1.erb +1 -1
- data/templates/cat1/_2.16.840.1.113883.10.20.24.3.43.cat1.erb +1 -1
- data/templates/cat1/_2.16.840.1.113883.10.20.24.3.44.cat1.erb +1 -1
- data/templates/cat1/_2.16.840.1.113883.10.20.24.3.45.cat1.erb +1 -1
- data/templates/cat1/_2.16.840.1.113883.10.20.24.3.46.cat1.erb +1 -1
- data/templates/cat1/_2.16.840.1.113883.10.20.24.3.47.cat1.erb +2 -1
- data/templates/cat1/_2.16.840.1.113883.10.20.24.3.55.cat1.erb +2 -2
- data/templates/cat1/_2.16.840.1.113883.10.20.24.3.57.cat1.erb +2 -2
- data/templates/cat1/_2.16.840.1.113883.10.20.24.3.59.cat1.erb +2 -2
- data/templates/cat1/_2.16.840.1.113883.10.20.24.3.62.cat1.erb +1 -1
- data/templates/cat1/_2.16.840.1.113883.10.20.24.3.63.cat1.erb +1 -1
- data/templates/cat1/_2.16.840.1.113883.10.20.24.3.64.cat1.erb +6 -2
- data/templates/cat1/_2.16.840.1.113883.10.20.24.3.66.cat1.erb +3 -3
- data/templates/cat1/_2.16.840.1.113883.10.20.24.3.69.cat1.erb +1 -1
- data/templates/cat1/_2.16.840.1.113883.10.20.24.3.7.cat1.erb +1 -1
- data/templates/cat1/_2.16.840.1.113883.10.20.24.3.76.cat1.erb +1 -1
- data/templates/cat1/_measures.cat1.erb +0 -2
- data/templates/cat1/_medication_details.cat1.erb +3 -3
- data/templates/cat1/_patient_data.cat1.erb +3 -0
- data/templates/cat1/_record_target.cat1.erb +6 -1
- data/templates/cat1/_result_value.cat1.erb +16 -13
- data/templates/html/_entries_by_section.html.erb +13 -5
- data/templates/html/show.html.erb +4 -2
- data/templates/metadata.hdata.erb +27 -24
- metadata +5 -2
@@ -5,7 +5,7 @@
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<!-- Risk Category Assessment -->
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<templateId root="2.16.840.1.113883.10.20.24.3.69"/>
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<id root="1.3.6.1.4.1.115" extension="<%= entry.id %>"/>
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-
<%== code_display(entry, 'preferred_code_sets' => ['LOINC', 'SNOMED-CT'], 'extra_content' => "sdtc:valueSet=\"#{value_set_oid}\"") %>
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+
<%== code_display(entry, 'value_set_map' => value_set_map,'preferred_code_sets' => ['LOINC', 'SNOMED-CT'], 'extra_content' => "sdtc:valueSet=\"#{value_set_oid}\"") %>
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<statusCode code="completed"/>
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<effectiveTime>
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@@ -21,7 +21,7 @@
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<participant typeCode="DEV">
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<participantRole classCode="MANU">
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<playingDevice classCode="DEV">
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-
<%== code_display(entry, 'preferred_code_sets' => ['LOINC', 'SNOMED-CT', 'ICD-9-PCS', 'ICD-10-PCS', 'CPT'], 'extra_content' => "sdtc:valueSet=\"#{value_set_oid}\"") %>
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+
<%== code_display(entry, 'value_set_map' => value_set_map, 'preferred_code_sets' => ['LOINC', 'SNOMED-CT', 'ICD-9-PCS', 'ICD-10-PCS', 'CPT'], 'extra_content' => "sdtc:valueSet=\"#{value_set_oid}\"") %>
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</playingDevice>
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</participantRole>
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</participant>
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@@ -15,7 +15,7 @@
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<high <%= value_or_null_flavor(entry.end_time) %>/>
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</effectiveTime>
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-
<%== code_display(entry, 'preferred_code_sets' => ['SNOMED-CT'], 'tag_name' => 'value', 'extra_content' => "xsi:type=\"CD\" sdtc:valueSet=\"#{value_set_oid}\"") %>
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18
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+
<%== code_display(entry, 'value_set_map' => value_set_map,'preferred_code_sets' => ['SNOMED-CT'], 'tag_name' => 'value', 'extra_content' => "xsi:type=\"CD\" sdtc:valueSet=\"#{value_set_oid}\"") %>
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<!-- Status -->
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<entryRelationship typeCode="REFR">
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<observation classCode="OBS" moodCode="EVN">
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@@ -19,7 +19,6 @@
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<th>eMeasure Title</th>
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<th>Version neutral identifier</th>
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<th>eMeasure Version Number</th>
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-
<th>NQF eMeasure Number</th>
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<th>Version specific identifier</th>
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</tr>
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</thead>
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@@ -29,7 +28,6 @@
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<td><%= measure.title %></td>
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<td><%= measure.hqmf_set_id %></td>
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<td><%= measure.hqmf_version_number %></td>
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-
<td><%= measure.id %></td>
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<td><%= measure.hqmf_id %></td>
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<td></td>
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</tr>
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@@ -1,9 +1,9 @@
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1
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-
<% if entry.route.present?
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1
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+
<% if entry.respond_to?(:route) && entry.route.present?
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2
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# hard coded to NCI Thesaurus for the code system since Cat I mandates that
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3
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-%>
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4
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-
<routeCode code="<%= entry.route['code'] %>" codeSystem="
|
4
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+
<routeCode code="<%= entry.route['code'] %>" codeSystem="<%= entry.route['codeSystem'] %>"/>
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<% end -%>
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6
6
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7
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-
<% if entry.dose.present? -%>
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7
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+
<% if entry.respond_to?(:dose) && entry.dose.present? -%>
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8
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<doseQuantity value="<%= entry.dose['value']%>"/>
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<% end -%>
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@@ -2,7 +2,12 @@
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<patientRole>
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<!-- id root="Cypress" extension="<%= patient.id %>"/ -->
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<!-- Fake Medicare HIC number -->
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-
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+
<%
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+
# get the pateint id , treate it as a hex number, turn it to a string and strip the last 9 characters off of it
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7
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+
hic = patient.id.to_s.hex.to_s
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+
hic.slice!(hic.length-9,9)
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+
%>
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+
<id extension="<%= hic %>A" root="2.16.840.1.113883.4.572"/>
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<addr use="HP">
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<streetAddressLine>202 Burlington Rd.</streetAddressLine>
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<city>Bedford</city>
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@@ -1,16 +1,19 @@
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-
<%
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-
if
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-
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-
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-
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<%
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-
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<%
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-
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-
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-
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-
end
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+
<% values.compact!
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if !values.empty?
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values.each do |ev|
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+
if ev.respond_to?(:codes) -%>
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+
<%== code_display(ev, 'preferred_code_sets' => ['LOINC', 'SNOMED-CT', 'ICD-9-CM', 'ICD-10-CM'], 'tag_name' => 'value', 'extra_content' => "xsi:type=\"CD\"") %>
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+
<% elsif ev.respond_to?(:scalar) -%>
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+
<% if is_num?(ev.scalar) -%>
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<value xsi:type="PQ" value="<%= ev.scalar %>" <% if ev.units && (ev.units != "") -%>unit="<%= ev.units %>"<% end -%>/>
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+
<% elsif is_bool?(ev.scalar)%>
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<value xsi:type="BL" value="<%= ev.scalar %>" />
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<% else -%>
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<value xsi:type="ST" ><%= ev.scalar %></value>
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<% end
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end
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end
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# else is empty
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else -%>
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<value xsi:type="CD" nullFlavor="UNK"/>
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<% end -%>
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@@ -1,13 +1,21 @@
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1
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<div id="patient_information_by_section" style="display:block">
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<%
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entries_by_section = {}
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+
udcs = nil
|
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+
if measures.length > 0
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+
udcs = unique_data_criteria(measures)
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+
end
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4
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Record::Sections.each do |section|
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if section != :insurance_providers
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-
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-
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-
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-
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-
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if patient.respond_to? section
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patient.send(section).each do |entry|
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if udcs.nil? || entry_matches_criteria(entry, udcs)
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decoded_section = decode_hqmf_section(section, entry.oid)
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entries_by_section[decoded_section] ||= []
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entries_by_section[decoded_section] << entry
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end
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end
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end
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end
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end
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%>
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@@ -133,8 +133,10 @@
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133
133
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<div>
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<h3><a href="#" onclick="toggle('table_by_encounter');" id="toggle_button">View By Encounter</a></h3>
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</div>
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-
<%== render :partial => 'entries_by_section', :locals => {patient: patient, code_map: code_map} %>
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-
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+
<%== render :partial => 'entries_by_section', :locals => {patient: patient, code_map: code_map, measures: measures} %>
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+
<% if measures.length==0 %>
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<%== render :partial => 'entries_by_encounter', :locals => {patient: patient, code_map: code_map, measures: measures} %>
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+
<% end %>
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<br /><br />
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<br /><br />
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@@ -1,35 +1,38 @@
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1
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-
<
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-
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-
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1
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<hrf-md:DocumentMetaData <% if namespace %>xmlns:hrf-md="http://www.hl7.org/schemas/hdata/2009/11/metadata"<%end%>>
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+
<% if metadata.mime_types %>
|
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<% metadata.mime_types.each do |mt| %>
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<hrf-md:MediaType>mt</hrf-md:MediaType>
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<% end %>
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<% end %>
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<% metadata.pedigrees.each do |pedigree| %>
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<%== render :partial => "pedigree", locals: {pedigree: pedigree}%>
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<% end %>
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-
<Title><%= entry.id %></Title>
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-
<LinkedDocuments>
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+
<hrf-md:Title><%= entry.id %></hrf-md:Title>
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<hrf-md:LinkedDocuments>
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<% metadata.linked_documents.each do |link| %>
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-
<Link>
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<Target <% if link.extension %> targetExtension="<%=link.extension%>" <% end %>><%= link.
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-
</Link>
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+
<hrf-md:Link>
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<hrf-md:Target <% if link.extension %> targetExtension="<%=link.extension%>" <% end %>><%= link.href %></hrf-md:Target>
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</hrf-md:Link>
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<% end %>
|
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-
</LinkedDocuments>
|
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-
<RecordDate>
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-
<CreatedDateTime><%= metadata.original_creation_time%></CreatedDateTime>
|
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-
<Modified>
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+
</hrf-md:LinkedDocuments>
|
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<hrf-md:RecordDate>
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<hrf-md:CreatedDateTime><%= metadata.original_creation_time%></hrf-md:CreatedDateTime>
|
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<hrf-md:Modified>
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<% metadata.modified_dates.each do |md| %>
|
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-
<ModifiedInfo>
|
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-
<ChangeDateTime><%= md.timestamp %></ChangeDateTime>
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+
<hrf-md:ModifiedInfo>
|
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+
<hrf-md:ChangeDateTime><%= md.timestamp %></hrf-md:ChangeDateTime>
|
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24
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<%== render :partial => "pedigree", locals: {pedigree: md.pedigree}%>
|
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-
</ModifiedInfo>
|
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+
</hrf-md:ModifiedInfo>
|
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26
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<% end %>
|
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-
</Modified>
|
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-
<Copied>
|
27
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+
</hrf-md:Modified>
|
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+
<hrf-md:Copied>
|
26
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<% metadata.copied_dates.each do |cd| %>
|
27
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-
<CopiedInfo>
|
28
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-
<ChangeDateTime><%= cd.timestamp %></ChangeDateTime>
|
30
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+
<hrf-md:CopiedInfo>
|
31
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+
<hrf-md:ChangeDateTime><%= cd.timestamp %></hrf-md:ChangeDateTime>
|
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<%== render :partial => "pedigree", locals: {pedigree: cd.pedigree}%>
|
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-
</CopiedInfo>
|
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+
</hrf-md:CopiedInfo>
|
31
34
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<% end %>
|
32
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-
</Copied>
|
33
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-
</RecordDate>
|
34
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-
<Confidentiality><%= metadata.confidentiality%></Confidentiality>
|
35
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-
</
|
35
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+
</hrf-md:Copied>
|
36
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+
</hrf-md:RecordDate>
|
37
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+
<hrf-md:Confidentiality><%= metadata.confidentiality%></hrf-md:Confidentiality>
|
38
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+
</hrf-md:DocumentMetaData>
|
metadata
CHANGED
@@ -1,7 +1,7 @@
|
|
1
1
|
--- !ruby/object:Gem::Specification
|
2
2
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name: health-data-standards
|
3
3
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version: !ruby/object:Gem::Version
|
4
|
-
version: 3.
|
4
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+
version: 3.2.0
|
5
5
|
prerelease:
|
6
6
|
platform: ruby
|
7
7
|
authors:
|
@@ -13,7 +13,7 @@ authors:
|
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13
13
|
autorequire:
|
14
14
|
bindir: bin
|
15
15
|
cert_chain: []
|
16
|
-
date: 2013-
|
16
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+
date: 2013-06-24 00:00:00.000000000 Z
|
17
17
|
dependencies:
|
18
18
|
- !ruby/object:Gem::Dependency
|
19
19
|
name: rest-client
|
@@ -195,6 +195,7 @@ files:
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|
195
195
|
- lib/health-data-standards/export/helper/cat1_view_helper.rb
|
196
196
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- lib/health-data-standards/export/helper/gc32_view_helper.rb
|
197
197
|
- lib/health-data-standards/export/helper/html_view_helper.rb
|
198
|
+
- lib/health-data-standards/export/helper/scooped_view_helper.rb
|
198
199
|
- lib/health-data-standards/export/html.rb
|
199
200
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- lib/health-data-standards/export/qrda/entry_template_resolver.rb
|
200
201
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- lib/health-data-standards/export/rendering_context.rb
|
@@ -282,6 +283,7 @@ files:
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|
282
283
|
- lib/health-data-standards/models/cqm/aggregate_objects.rb
|
283
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- lib/health-data-standards/models/cqm/bundle.rb
|
284
285
|
- lib/health-data-standards/models/cqm/measure.rb
|
286
|
+
- lib/health-data-standards/models/cqm/patient_cache.rb
|
285
287
|
- lib/health-data-standards/models/cqm/query_cache.rb
|
286
288
|
- lib/health-data-standards/models/encounter.rb
|
287
289
|
- lib/health-data-standards/models/entry.rb
|
@@ -362,6 +364,7 @@ files:
|
|
362
364
|
- lib/hqmf-parser/parser.rb
|
363
365
|
- lib/hqmf-parser.rb
|
364
366
|
- lib/util/counter.rb
|
367
|
+
- templates/_author.hdata.erb
|
365
368
|
- templates/_pedigree.hdata.erb
|
366
369
|
- templates/c32/_allergies.c32.erb
|
367
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|
- templates/c32/_allergies_no_current.c32.erb
|