gs2crmod 0.5.8 → 0.5.9

data/VERSION

@@ -1 +1 @@
-0.5.8
+0.5.9

data/gs2crmod.gemspec

@@ -5,11 +5,11 @@
 
 Gem::Specification.new do |s|
   s.name = "gs2crmod"
-  s.version = "0.5.8"
+  s.version = "0.5.9"
 
   s.required_rubygems_version = Gem::Requirement.new(">= 0") if s.respond_to? :required_rubygems_version=
   s.authors = ["Edmund Highcock", "Ferdinand van Wyk"]
-  s.date = "2013-05-07"
+  s.date = "2013-05-28"
   s.description = "GS2 is a gyrokinetic flux tube initial value turbulence code which can be used for fusion or astrophysical plasmas. CodeRunner is a framework for the automated running and analysis of large simulations. This module allows GS2 (and its sister code AstroGK) to harness the power of the CodeRunner framework."
   s.email = "edmundhighcock@sourceforge.net"
   s.extensions = ["ext/extconf.rb"]
@@ -69,7 +69,7 @@ Gem::Specification.new do |s|
   s.licenses = ["GSLv3"]
   s.require_paths = ["lib"]
   s.required_ruby_version = Gem::Requirement.new(">= 1.9.1")
-  s.rubygems_version = "1.8.24"
+  s.rubygems_version = "1.8.23"
   s.summary = "Module to allow CodeRunner to run and analyse the GS2 and AstroGK codes."
 
   if s.respond_to? :specification_version then

data/lib/gs2crmod/gsl_data.rb

@@ -806,6 +806,11 @@ module GSLVectorComplexes
 				case @grid_option
 				when "single"
 					temp = GSL::Vector.alloc(netcdf_file.var('phi').get({'start' => [0,0, 0, 0], 'end' => [-1,-1,0,0]}).to_a.flatten)
+				when "range"
+					a = netcdf_file.var('phi').get({'start' => [0, 0, 0, options[:ky_index] - 1], 'end' => [-1, -1, -1, options[:ky_index] - 1]})
+					#temp =  GSL::Vector.alloc(a.to_a[0].values_at(*kx_elements).flatten)
+					temp =  GSL::Vector.alloc(a.to_a[0][0].flatten)
+				end
 				when "box"
 					ep 'kx_elements', kx_elements = gsl_vector('linked_kx_elements', options).to_a
 					a = netcdf_file.var('phi').get({'start' => [0, 0, 0, options[:ky_index] - 1], 'end' => [-1, -1, -1, options[:ky_index] - 1]})

data/lib/gs2crmod/ingen.rb

@@ -130,6 +130,10 @@ def ingen
 
 	error("delt (#@delt) < delt_minimum") if @delt and @delt_minimum and @delt < @delt_minimum
 
+	# negrid
+	#
+	warning('negrid < 8 is not a good idea!') if @negrid and @negrid < 8
+
 	# Parallelisation Errors
 	
 		

metadata

@@ -1,7 +1,7 @@
 --- !ruby/object:Gem::Specification
 name: gs2crmod
 version: !ruby/object:Gem::Version
-  version: 0.5.8
+  version: 0.5.9
   prerelease: 
 platform: ruby
 authors:
@@ -10,7 +10,7 @@ authors:
 autorequire: 
 bindir: bin
 cert_chain: []
-date: 2013-05-07 00:00:00.000000000 Z
+date: 2013-05-28 00:00:00.000000000 Z
 dependencies:
 - !ruby/object:Gem::Dependency
   name: coderunner
@@ -171,7 +171,7 @@ required_rubygems_version: !ruby/object:Gem::Requirement
       version: '0'
 requirements: []
 rubyforge_project: 
-rubygems_version: 1.8.24
+rubygems_version: 1.8.23
 signing_key: 
 specification_version: 3
 summary: Module to allow CodeRunner to run and analyse the GS2 and AstroGK codes.