gs2crmod 0.11.84 → 0.11.85
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- checksums.yaml +4 -4
- data/VERSION +1 -1
- data/gs2crmod.gemspec +3 -3
- data/lib/gs2crmod/gs2.rb +44 -41
- metadata +2 -2
checksums.yaml
CHANGED
@@ -1,7 +1,7 @@
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---
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SHA1:
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-
metadata.gz:
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data.tar.gz:
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metadata.gz: 7940a19eb719531ed06ee4b1e898068b7e8d2ab0
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4
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data.tar.gz: 083c2ab1b9205a6a374f91952f6ce78f7cac3786
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SHA512:
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metadata.gz:
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data.tar.gz:
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metadata.gz: f4efdf8ba32a8f97ad52938d4ab35538cb05ae44018d1d6632cd2b3dbe6097b98ef578209483f526c5c77c727991def361407f348f09b4b1556dcbc8e01945c8
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7
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data.tar.gz: f3269ef0b4d623b45296f11f283c6ad822d387b11349172720228330858ec495103f694c3715c1e36fa5d55f7f7a2503e7673015f49a5722c9fcdf70264fe56e
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data/VERSION
CHANGED
@@ -1 +1 @@
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1
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-
0.11.
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1
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+
0.11.85
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data/gs2crmod.gemspec
CHANGED
@@ -2,17 +2,17 @@
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2
2
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# DO NOT EDIT THIS FILE DIRECTLY
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3
3
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# Instead, edit Jeweler::Tasks in Rakefile, and run 'rake gemspec'
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4
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# -*- encoding: utf-8 -*-
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-
# stub: gs2crmod 0.11.
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5
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+
# stub: gs2crmod 0.11.85 ruby lib
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# stub: ext/extconf.rb
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7
7
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Gem::Specification.new do |s|
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s.name = "gs2crmod"
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10
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-
s.version = "0.11.
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10
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+
s.version = "0.11.85"
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11
11
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12
12
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s.required_rubygems_version = Gem::Requirement.new(">= 0") if s.respond_to? :required_rubygems_version=
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s.require_paths = ["lib"]
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s.authors = ["Edmund Highcock", "Ferdinand van Wyk"]
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15
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-
s.date = "
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+
s.date = "2015-01-06"
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s.description = "GS2 is a gyrokinetic flux tube initial value turbulence code which can be used for fusion or astrophysical plasmas. CodeRunner is a framework for the automated running and analysis of large simulations. This module allows GS2 (and its sister code AstroGK) to harness the power of the CodeRunner framework."
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s.email = "edmundhighcock@sourceforge.net"
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s.extensions = ["ext/extconf.rb"]
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data/lib/gs2crmod/gs2.rb
CHANGED
@@ -1122,64 +1122,67 @@ attr_accessor :iphi00, :saturation_time #Necessary for back. comp. due to an old
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1122
1122
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1123
1123
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folder = File.dirname(File.expand_path(__FILE__)) # i.e. the directory this file is in
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1124
1124
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1125
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-
SPECIES_DEPENDENT_NAMELISTS = eval(File.read(folder + '/species_dependent_namelists.rb'), binding, folder + '/species_dependent_namelists.rb')
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1126
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-
#
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1127
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-
SPECIES_DEPENDENT_VARIABLES_WITH_HELP = SPECIES_DEPENDENT_NAMELISTS.values.inject({}) do |hash, namelist_hash|
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1128
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-
namelist_hash[:variables].each do |var, var_hash|
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1129
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-
hash[var] = var_hash[:help]
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1130
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-
end
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1131
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-
hash
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1132
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-
end
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1125
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+
SPECIES_DEPENDENT_NAMELISTS = eval(File.read(folder + '/species_dependent_namelists.rb'), binding, folder + '/species_dependent_namelists.rb')
|
1133
1126
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1134
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-
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1135
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-
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1136
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-
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1137
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-
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1138
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-
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1139
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-
attr_accessor name + "_#{n}".to_sym #for backwards compatibility
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1127
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+
SPECIES_DEPENDENT_VARIABLES_WITH_HELP = SPECIES_DEPENDENT_NAMELISTS.values.inject({}) do |hash, namelist_hash|
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1128
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+
namelist_hash[:variables].each do |var, var_hash|
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1129
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hash[var] = var_hash[:help]
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1130
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end
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1131
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+
hash
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1140
1132
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end
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1141
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-
end
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1142
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-
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1143
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-
old_vars = %w[
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1144
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-
:TiTe
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1145
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-
:Rmaj
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1146
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-
:R_geo
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1147
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-
:invLp_input
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1148
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-
:D_hypervisc
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1149
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-
:D_hyperres
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1150
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-
:D_hyper
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1151
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-
:C_par
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1152
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-
:C_perp
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-
].map{|n| n.to_s.sub(/^:/, '').to_sym}
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-
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-
old_vars.each do |var|
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alias_method(var, var.to_s.downcase.to_sym)
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-
alias_method("#{var}=".to_sym, "#{var.downcase}=".to_sym)
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1158
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-
end
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-
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1160
1133
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1134
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+
SPECIES_DEPENDENT_VARIABLES = SPECIES_DEPENDENT_VARIABLES_WITH_HELP.keys
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1135
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+
SPECIES_DEPENDENT_VARIABLES.each{|var| attr_accessor var} # for backwards compatibility
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1161
1136
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1137
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['i', 'e'].each do |n|
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1138
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SPECIES_DEPENDENT_VARIABLES_WITH_HELP.each do |name, help|
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1139
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attr_accessor name + "_#{n}".to_sym #for backwards compatibility
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1140
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+
end
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1141
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end
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1142
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-
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-
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-
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-
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1143
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+
old_vars = %w[
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1144
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+
:TiTe
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1145
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+
:Rmaj
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1146
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+
:R_geo
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1147
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+
:invLp_input
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1148
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+
:D_hypervisc
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1149
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+
:D_hyperres
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1150
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+
:D_hyper
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1151
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+
:C_par
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1152
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:C_perp
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1153
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].map{|n| n.to_s.sub(/^:/, '').to_sym}
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1154
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+
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1155
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old_vars.each do |var|
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1156
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alias_method(var, var.to_s.downcase.to_sym)
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1157
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alias_method("#{var}=".to_sym, "#{var.downcase}=".to_sym)
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1158
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end
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1168
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-
end
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1169
1159
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1160
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+
def run_namelist_backwards_compatibility
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1161
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SPECIES_DEPENDENT_VARIABLES.each do |var|
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1162
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set(var + "_1".to_sym, (send(var + "_1".to_sym) or send(var + "_i".to_sym) or send(var)))
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1163
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set(var + "_2".to_sym, (send(var + "_2".to_sym) or send(var + "_e".to_sym)))
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1164
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end
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1165
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end
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1171
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-
def stop
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1172
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-
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1173
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-
end
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1167
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def stop
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1168
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`touch #@directory/#@run_name.stop`
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1169
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end
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1174
1170
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1175
1171
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def vim_output
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1176
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system "vim -Ro #{output_file} #{error_file} #@directory/#@run_name.error #@directory/#@run_name.out "
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1177
1173
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end
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1178
1174
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alias :vo :vim_output
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1175
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+
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1176
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def vim_input
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1177
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system "vim -Ro #@directory/#@run_name.in "
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1178
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end
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1179
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alias :vi :vim_input
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1180
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+
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1179
1181
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def vim_stdout
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1180
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system "vim -Ro #{output_file} "
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1181
1183
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end
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1182
1184
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alias :vo1 :vim_stdout
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1185
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+
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def plot_efit_file
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1184
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Dir.chdir(@directory) do
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1185
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text = File.read(@eqfile)
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metadata
CHANGED
@@ -1,7 +1,7 @@
|
|
1
1
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--- !ruby/object:Gem::Specification
|
2
2
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name: gs2crmod
|
3
3
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version: !ruby/object:Gem::Version
|
4
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-
version: 0.11.
|
4
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+
version: 0.11.85
|
5
5
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platform: ruby
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6
6
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authors:
|
7
7
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- Edmund Highcock
|
@@ -9,7 +9,7 @@ authors:
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autorequire:
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bindir: bin
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11
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cert_chain: []
|
12
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-
date:
|
12
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+
date: 2015-01-06 00:00:00.000000000 Z
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dependencies:
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14
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- !ruby/object:Gem::Dependency
|
15
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name: coderunner
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