graph_matching 0.1.0 → 0.1.1

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Files changed (67) hide show
  1. checksums.yaml +4 -4
  2. data/CHANGELOG.md +6 -0
  3. data/graph_matching.gemspec +13 -11
  4. data/lib/graph_matching/version.rb +1 -1
  5. metadata +2 -77
  6. data/benchmark/mcm_bipartite/complete_bigraphs/benchmark.rb +0 -33
  7. data/benchmark/mcm_bipartite/complete_bigraphs/compare.gnuplot +0 -19
  8. data/benchmark/mcm_bipartite/complete_bigraphs/edges_times_vertexes.data +0 -500
  9. data/benchmark/mcm_bipartite/complete_bigraphs/plot.gnuplot +0 -21
  10. data/benchmark/mcm_bipartite/complete_bigraphs/plot.png +0 -0
  11. data/benchmark/mcm_bipartite/complete_bigraphs/time.data +0 -499
  12. data/benchmark/mcm_general/complete_graphs/benchmark.rb +0 -30
  13. data/benchmark/mcm_general/complete_graphs/plot.gnuplot +0 -19
  14. data/benchmark/mcm_general/complete_graphs/plot.png +0 -0
  15. data/benchmark/mcm_general/complete_graphs/time.data +0 -499
  16. data/benchmark/mcm_general/complete_graphs/v_cubed.data +0 -500
  17. data/benchmark/mwm_bipartite/complete_bigraphs/benchmark.rb +0 -43
  18. data/benchmark/mwm_bipartite/complete_bigraphs/nmN.data +0 -499
  19. data/benchmark/mwm_bipartite/complete_bigraphs/nmN.xlsx +0 -0
  20. data/benchmark/mwm_bipartite/complete_bigraphs/plot.gnuplot +0 -22
  21. data/benchmark/mwm_bipartite/complete_bigraphs/plot.png +0 -0
  22. data/benchmark/mwm_bipartite/complete_bigraphs/time.data +0 -299
  23. data/benchmark/mwm_bipartite/misc/calc_d2/benchmark.rb +0 -25
  24. data/benchmark/mwm_general/complete_graphs/benchmark.rb +0 -32
  25. data/benchmark/mwm_general/complete_graphs/compare.gnuplot +0 -19
  26. data/benchmark/mwm_general/complete_graphs/mn_log_n.data +0 -299
  27. data/benchmark/mwm_general/complete_graphs/mn_log_n.xlsx +0 -0
  28. data/benchmark/mwm_general/complete_graphs/plot.gnuplot +0 -22
  29. data/benchmark/mwm_general/complete_graphs/plot.png +0 -0
  30. data/benchmark/mwm_general/complete_graphs/time.data +0 -299
  31. data/benchmark/mwm_general/incomplete_graphs/benchmark.rb +0 -38
  32. data/benchmark/mwm_general/incomplete_graphs/plot.gnuplot +0 -22
  33. data/benchmark/mwm_general/incomplete_graphs/plot.png +0 -0
  34. data/benchmark/mwm_general/incomplete_graphs/time_10_pct.data +0 -299
  35. data/benchmark/mwm_general/incomplete_graphs/time_20_pct.data +0 -299
  36. data/benchmark/mwm_general/incomplete_graphs/time_30_pct.data +0 -299
  37. data/profile/mcm_bipartite/compare.sh +0 -15
  38. data/profile/mcm_bipartite/publish.sh +0 -12
  39. data/profile/mwm_general/compare.sh +0 -15
  40. data/profile/mwm_general/profile.rb +0 -28
  41. data/profile/mwm_general/publish.sh +0 -12
  42. data/research/1965_edmonds.pdf +0 -0
  43. data/research/1975_even_kariv.pdf +0 -0
  44. data/research/1976_gabow.pdf +0 -0
  45. data/research/1980_micali_vazirani.pdf +0 -0
  46. data/research/1985_gabow.pdf +0 -0
  47. data/research/2002_tarjan.pdf +0 -0
  48. data/research/2013_zwick.pdf +0 -0
  49. data/research/examples/unweighted_general/1.txt +0 -86
  50. data/research/goodwin.pdf +0 -0
  51. data/research/kavathekar-scribe.pdf +0 -0
  52. data/research/kusner.pdf +0 -0
  53. data/research/van_rantwijk/mwm_example.py +0 -19
  54. data/research/van_rantwijk/mwmatching.py +0 -945
  55. data/spec/graph_matching/algorithm/matching_algorithm_spec.rb +0 -14
  56. data/spec/graph_matching/algorithm/mcm_bipartite_spec.rb +0 -98
  57. data/spec/graph_matching/algorithm/mcm_general_spec.rb +0 -159
  58. data/spec/graph_matching/algorithm/mwm_bipartite_spec.rb +0 -82
  59. data/spec/graph_matching/algorithm/mwm_general_spec.rb +0 -442
  60. data/spec/graph_matching/graph/bigraph_spec.rb +0 -73
  61. data/spec/graph_matching/graph/graph_spec.rb +0 -53
  62. data/spec/graph_matching/graph/weighted_spec.rb +0 -29
  63. data/spec/graph_matching/integer_vertexes_spec.rb +0 -21
  64. data/spec/graph_matching/matching_spec.rb +0 -89
  65. data/spec/graph_matching/visualize_spec.rb +0 -38
  66. data/spec/graph_matching_spec.rb +0 -9
  67. data/spec/spec_helper.rb +0 -26
@@ -1,22 +0,0 @@
1
- data_dir = "~/git/jaredbeck/graph_matching/benchmark/mwm_general/complete_graphs"
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-
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- set title "MWM Should Be O(ev log v) In General Graphs\n".\
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- "(Galil, 1986, p. 34)"
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- set key left box
6
- set term png size 800, 500
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- set output data_dir."/plot.png"
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-
9
- set linetype 1 pointtype 7 linecolor rgb "#FF0000"
10
- set linetype 2 linewidth 3 linecolor rgb "#00B800"
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-
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- set xlabel 'Number of Vertexes, v' textcolor rgb "black"
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- set ytics autofreq textcolor rgb "black"
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- set ylabel 'Time (s)' textcolor rgb "black"
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- set y2tics autofreq textcolor rgb "black"
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- set y2label 'ev log v' textcolor rgb "black"
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-
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- plot \
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- data_dir."/time.data" every 1:1:1::299 \
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- using 1:2 title "Time (s)" lt 1 axes x1y1, \
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- data_dir."/mn_log_n.data" every 1:1:1::299 \
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- using 1:4 title "ev log v" with lines lt 2 axes x1y2
@@ -1,299 +0,0 @@
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@@ -1,38 +0,0 @@
1
- # encoding: utf-8
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-
3
- # No shebang here. Usage:
4
- # ruby -I lib benchmark/mwm_general/dense_graphs/benchmark.rb
5
-
6
- require 'benchmark'
7
- require 'graph_matching'
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-
9
- COMPLETENESS = 0.1
10
- MIN_SIZE = 2
11
- MAX_SIZE = 300
12
-
13
- $stdout.sync = true
14
-
15
- # `completeness` - decimal percentage of vertexes each vertex
16
- # is connected to.
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- def incomplete_graph(n, completeness)
18
- g = GraphMatching::Graph::WeightedGraph.new
19
- 0.upto(n - 1) do |i| g.add_vertex(i) end
20
- max_weight = ((1..n - 1).reduce(:+).to_f * completeness).to_i + 1
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- 0.upto(n - 2) do |i|
22
- (i + 1).upto(n - 1) do |j|
23
- next unless rand < completeness
24
- g.add_edge(i, j)
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- w = rand(max_weight)
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- g.set_w([i, j], w)
27
- end
28
- end
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- g
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- end
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-
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- MIN_SIZE.upto(MAX_SIZE) do |v|
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- print "%5d\t" % [v]
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- g = incomplete_graph(v, COMPLETENESS)
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- GC.disable
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- puts(Benchmark.realtime { g.maximum_weighted_matching(true) })
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- GC.enable
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- end
@@ -1,22 +0,0 @@
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- data_dir = "~/git/jaredbeck/graph_matching/benchmark/mwm_general/incomplete_graphs"
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-
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- set title "MWM in Incomplete General Graphs"
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- set key left box
5
- set term png size 800, 500
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- set output data_dir."/plot.png"
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-
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- set linetype 1 pointtype 7 linecolor rgb "#FF0000"
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- set linetype 2 pointtype 7 linecolor rgb "#00B800"
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- set linetype 3 pointtype 7 linecolor rgb "#0000FF"
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-
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- set xlabel 'Number of Vertexes (n)' tc lt 1
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- set ytics autofreq tc lt 1
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- set ylabel 'Time (s)' tc lt 1
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-
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- plot \
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- data_dir."/time_30_pct.data" \
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- using 1:2 title "Time (s) 30% Completeness" lt 3, \
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- data_dir."/time_20_pct.data" \
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- using 1:2 title "Time (s) 20% Completeness" lt 2, \
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- data_dir."/time_10_pct.data" \
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- using 1:2 title "Time (s) 10% Completeness" lt 1
@@ -1,299 +0,0 @@
1
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- 3 3.7192992749623954e-05
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