gphys 1.5.5 → 1.5.7

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Files changed (41) hide show
  1. checksums.yaml +5 -5
  2. data/ChangeLog +0 -7595
  3. data/LICENSE.txt +1 -1
  4. data/bin/gpcut +12 -0
  5. data/bin/gpvect +88 -77
  6. data/bin/gpview +200 -103
  7. data/ext/numru/ganalysis/ext_init.c +9 -0
  8. data/ext/numru/ganalysis/extconf.rb +43 -0
  9. data/ext/numru/ganalysis/narray_ext_dfloat.c +84 -0
  10. data/ext/numru/ganalysis/pde_ext.c +130 -0
  11. data/ext/numru/gphys/dim_op.c +336 -44
  12. data/ext/numru/gphys/ext_init.c +6 -0
  13. data/ext/numru/gphys/interpo.c +326 -3
  14. data/gphys.gemspec +1 -0
  15. data/lib/numru/dclext.rb +78 -16
  16. data/lib/numru/ganalysis/beta_plane.rb +6 -4
  17. data/lib/numru/ganalysis/eof.rb +63 -41
  18. data/lib/numru/ganalysis/fitting.rb +109 -30
  19. data/lib/numru/ganalysis/histogram.rb +3 -3
  20. data/lib/numru/ganalysis/log_p.rb +20 -0
  21. data/lib/numru/ganalysis/lomb_scargle.rb +205 -0
  22. data/lib/numru/ganalysis/met_z.rb +132 -3
  23. data/lib/numru/ganalysis/narray_ext.rb +13 -0
  24. data/lib/numru/ganalysis/pde.rb +109 -0
  25. data/lib/numru/ganalysis/planet.rb +136 -1
  26. data/lib/numru/ganalysis/qg.rb +224 -3
  27. data/lib/numru/ggraph.rb +95 -23
  28. data/lib/numru/gphys/axis.rb +4 -2
  29. data/lib/numru/gphys/gphys.rb +6 -5
  30. data/lib/numru/gphys/gphys_dim_op.rb +69 -6
  31. data/lib/numru/gphys/gphys_fft.rb +30 -0
  32. data/lib/numru/gphys/gphys_io_common.rb +2 -0
  33. data/lib/numru/gphys/grads_gridded.rb +77 -29
  34. data/lib/numru/gphys/grib.rb +2 -2
  35. data/lib/numru/gphys/grib_params.rb +3 -3
  36. data/lib/numru/gphys/interpolate.rb +153 -1
  37. data/lib/numru/gphys/varraycomposite.rb +7 -4
  38. data/lib/numru/gphys/version.rb +1 -1
  39. data/lib/numru/gphys.rb +1 -0
  40. data/testdata/pres.jan.nc +0 -0
  41. metadata +13 -4
@@ -149,7 +149,9 @@ module NumRu
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  # p @bound_idx, @varrays
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  end
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- undef initialize_mapping
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+ [:initialize_mapping, :mapping, :varray, :ary, :reshape].each do |method|
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+ undef_method(method) if method_defined?(method)
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+ end
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  def set_att(name,val)
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  @varrays.each{|va|
@@ -158,8 +160,6 @@ module NumRu
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  self
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  end
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- undef :mapping, :varray, :ary
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-
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  def inspect
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  "<#{self.class.to_s} shape=#{shape.inspect} #_of_tiles=#{@bound_idx.collect{|b| b.length-1}.inspect}>"
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  # "bounds=#{@bound_idx.collect{|b| b[1..-2]}.inspect}"
@@ -203,6 +203,9 @@ module NumRu
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  raise TypeError, "Unexpected type #{v.class}"
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  end
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  end
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+ if val.is_a?(NArray) && v.is_a?(NArrayMiss)
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+ val = NArrayMiss.to_nam(val)
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+ end
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  val[*vidx] = v
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  }
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  val
@@ -286,7 +289,7 @@ module NumRu
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  #def reshape!( *shape )
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  # raise "cannot reshape a #{class}. Use copy first to make it a VArray with NArray"
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  #end
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- undef reshape!
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+ #undef reshape!
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  ## Not needed, so far:
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  #def convention
@@ -1,6 +1,6 @@
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  module NumRu
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  class GPhys
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  # Add subsubminor version while under development; remove it and advance version to release
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- VERSION = "1.5.5"
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+ VERSION = "1.5.7"
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  end
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  end
data/lib/numru/gphys.rb CHANGED
@@ -12,4 +12,5 @@ require 'numru/gphys_ext' # extension library
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  require 'numru/gphys/interpolate'
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  require 'numru/gphys/gphys_dim_op'
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  require 'numru/gdir'
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+ require 'numru/gphys/derivative'
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  # require 'numru/gphys/ep_flux' # Made optional. Require it explicitly if needed
Binary file
metadata CHANGED
@@ -1,7 +1,7 @@
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  --- !ruby/object:Gem::Specification
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  name: gphys
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  version: !ruby/object:Gem::Version
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- version: 1.5.5
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+ version: 1.5.7
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  platform: ruby
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  authors:
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  - Takeshi Horinouchi
@@ -12,7 +12,7 @@ authors:
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  autorequire:
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  bindir: bin
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  cert_chain: []
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- date: 2018-03-20 00:00:00.000000000 Z
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+ date: 2025-10-13 00:00:00.000000000 Z
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  dependencies:
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  - !ruby/object:Gem::Dependency
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  name: narray
@@ -132,6 +132,7 @@ executables:
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  - grads2nc_with_gphys
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  extensions:
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  - ext/numru/gphys/extconf.rb
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+ - ext/numru/ganalysis/extconf.rb
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  extra_rdoc_files: []
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  files:
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  - ".ChangeLog.until201303"
@@ -539,6 +540,10 @@ files:
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  - doc/update_rdoc
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  - doc/varray.html
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  - doc/varraycomposite.html
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+ - ext/numru/ganalysis/ext_init.c
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+ - ext/numru/ganalysis/extconf.rb
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+ - ext/numru/ganalysis/narray_ext_dfloat.c
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+ - ext/numru/ganalysis/pde_ext.c
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  - ext/numru/gphys/dim_op.c
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  - ext/numru/gphys/ext_coord.c
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  - ext/numru/gphys/ext_init.c
@@ -557,8 +562,11 @@ files:
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  - lib/numru/ganalysis/fitting.rb
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  - lib/numru/ganalysis/histogram.rb
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  - lib/numru/ganalysis/log_p.rb
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+ - lib/numru/ganalysis/lomb_scargle.rb
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  - lib/numru/ganalysis/met.rb
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  - lib/numru/ganalysis/met_z.rb
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+ - lib/numru/ganalysis/narray_ext.rb
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+ - lib/numru/ganalysis/pde.rb
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  - lib/numru/ganalysis/planet.rb
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  - lib/numru/ganalysis/qg.rb
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  - lib/numru/ganalysis/sigma_coord.rb
@@ -623,6 +631,7 @@ files:
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  - testdata/UV.jan.nc
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  - testdata/assoc_crds.nc
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  - testdata/cira86.dat
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+ - testdata/pres.jan.nc
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  homepage: http://www.gfd-dennou.org/arch/ruby/products/gphys/
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  licenses:
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  - BSD-2-Clause
@@ -644,8 +653,7 @@ required_rubygems_version: !ruby/object:Gem::Requirement
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  - !ruby/object:Gem::Version
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  version: '0'
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  requirements: []
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- rubyforge_project:
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- rubygems_version: 2.5.2.1
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+ rubygems_version: 3.2.5
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  signing_key:
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  specification_version: 4
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  summary: A multi-purpose class to handle Gridded Physical quantities
@@ -664,3 +672,4 @@ test_files:
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  - testdata/UV.jan.nc
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  - testdata/assoc_crds.nc
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  - testdata/cira86.dat
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+ - testdata/pres.jan.nc