google-cloud-life_sciences-v2beta 0.2.0 → 0.4.0

checksums.yaml

@@ -1,7 +1,7 @@
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data/AUTHENTICATION.md

@@ -114,7 +114,7 @@ credentials are discovered.
 To configure your system for this, simply:
 
 1. [Download and install the Cloud SDK](https://cloud.google.com/sdk)
-2. Authenticate using OAuth 2.0 `$ gcloud auth login`
+2. Authenticate using OAuth 2.0 `$ gcloud auth application-default login`
 3. Write code as if already authenticated.
 
 **NOTE:** This is _not_ recommended for running in production. The Cloud SDK

data/README.md

@@ -1,6 +1,6 @@
 # Ruby Client for the Cloud Life Sciences V2beta API
 
-API Client library for the Cloud Life Sciences V2beta API
+Cloud Life Sciences is a suite of services and tools for managing, processing, and transforming life sciences data.
 
 Cloud Life Sciences is a suite of services and tools for managing, processing, and transforming life sciences data. It also enables advanced insights and operational workflows using highly scalable and compliant infrastructure.
 
@@ -46,7 +46,7 @@ for general usage information.
 ## Enabling Logging
 
 To enable logging for this library, set the logger for the underlying [gRPC](https://github.com/grpc/grpc/tree/master/src/ruby) library.
-The logger that you set may be a Ruby stdlib [`Logger`](https://ruby-doc.org/stdlib/libdoc/logger/rdoc/Logger.html) as shown below,
+The logger that you set may be a Ruby stdlib [`Logger`](https://ruby-doc.org/current/stdlibs/logger/Logger.html) as shown below,
 or a [`Google::Cloud::Logging::Logger`](https://googleapis.dev/ruby/google-cloud-logging/latest)
 that will write logs to [Cloud Logging](https://cloud.google.com/logging/). See [grpc/logconfig.rb](https://github.com/grpc/grpc/blob/master/src/ruby/lib/grpc/logconfig.rb)
 and the gRPC [spec_helper.rb](https://github.com/grpc/grpc/blob/master/src/ruby/spec/spec_helper.rb) for additional information.

data/lib/google/cloud/life_sciences/v2beta/bindings_override.rb

@@ -0,0 +1,102 @@
+# frozen_string_literal: true
+
+# Copyright 2023 Google LLC
+#
+# Licensed under the Apache License, Version 2.0 (the "License");
+# you may not use this file except in compliance with the License.
+# You may obtain a copy of the License at
+#
+#     https://www.apache.org/licenses/LICENSE-2.0
+#
+# Unless required by applicable law or agreed to in writing, software
+# distributed under the License is distributed on an "AS IS" BASIS,
+# WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
+# See the License for the specific language governing permissions and
+# limitations under the License.
+
+# Auto-generated by gapic-generator-ruby. DO NOT EDIT!
+
+require "gapic/config"
+
+module Google
+  module Cloud
+    module LifeSciences
+      ##
+      # @example Loading just the REST part of this package, including all its services, and instantiating a REST client
+      #
+      #     require "google/cloud/life_sciences/v2beta/rest"
+      #     client = ::Google::Cloud::LifeSciences::V2beta::WorkflowsService::Rest::Client.new
+      #
+      module V2beta
+        ##
+        # @private
+        # Initialize the mixin bindings configuration
+        #
+        def self.configure
+          @configure ||= begin
+            namespace = ["Google", "Cloud", "LifeSciences"]
+            parent_config = while namespace.any?
+                              parent_name = namespace.join "::"
+                              parent_const = const_get parent_name
+                              break parent_const.configure if parent_const.respond_to? :configure
+                              namespace.pop
+                            end
+
+            default_config = Configuration.new parent_config
+            default_config.bindings_override["google.cloud.location.Locations.GetLocation"] = [
+              Gapic::Rest::GrpcTranscoder::HttpBinding.create_with_validation(
+                uri_method: :get,
+                uri_template: "/v2beta/{name}",
+                matches: [
+                  ["name", %r{^projects/[^/]+/locations/[^/]+/?$}, false]
+                ],
+                body: nil
+              )
+            ]
+            default_config.bindings_override["google.cloud.location.Locations.ListLocations"] = [
+
+              Gapic::Rest::GrpcTranscoder::HttpBinding.create_with_validation(
+                uri_method: :get,
+                uri_template: "/v2beta/{name}/locations",
+                matches: [
+                  ["name", %r{^projects/[^/]+/?$}, false]
+                ],
+                body: nil
+              )
+            ]
+            default_config
+          end
+          yield @configure if block_given?
+          @configure
+        end
+
+        ##
+        # @private
+        # Configuration class for the google.cloud.lifesciences.v2beta package.
+        #
+        # This class contains common configuration for all services
+        # of the google.cloud.lifesciences.v2beta package.
+        #
+        # This configuration is for internal use of the client library classes,
+        # and it is not intended that the end-users will read or change it.
+        #
+        class Configuration
+          extend ::Gapic::Config
+
+          # @private
+          # Overrides for http bindings for the RPC of the mixins for this package.
+          # Services in this package should use these when creating clients for the mixin services.
+          # @return [::Hash{::Symbol=>::Array<::Gapic::Rest::GrpcTranscoder::HttpBinding>}]
+          config_attr :bindings_override, {}, ::Hash, nil
+
+          # @private
+          def initialize parent_config = nil
+            @parent_config = parent_config unless parent_config.nil?
+
+            yield self if block_given?
+          end
+        end
+      end
+    end
+  end
+end

data/lib/google/cloud/life_sciences/v2beta/rest.rb

@@ -0,0 +1,38 @@
+# frozen_string_literal: true
+
+# Copyright 2023 Google LLC
+#
+# Licensed under the Apache License, Version 2.0 (the "License");
+# you may not use this file except in compliance with the License.
+# You may obtain a copy of the License at
+#
+#     https://www.apache.org/licenses/LICENSE-2.0
+#
+# Unless required by applicable law or agreed to in writing, software
+# distributed under the License is distributed on an "AS IS" BASIS,
+# WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
+# See the License for the specific language governing permissions and
+# limitations under the License.
+
+# Auto-generated by gapic-generator-ruby. DO NOT EDIT!
+
+require "google/cloud/life_sciences/v2beta/workflows_service/rest"
+require "google/cloud/life_sciences/v2beta/bindings_override"
+require "google/cloud/life_sciences/v2beta/version"
+
+module Google
+  module Cloud
+    module LifeSciences
+      ##
+      # To load just the REST part of this package, including all its services, and instantiate a REST client:
+      #
+      # @example
+      #
+      #     require "google/cloud/life_sciences/v2beta/rest"
+      #     client = ::Google::Cloud::LifeSciences::V2beta::WorkflowsService::Rest::Client.new
+      #
+      module V2beta
+      end
+    end
+  end
+end

data/lib/google/cloud/life_sciences/v2beta/version.rb

@@ -21,7 +21,7 @@ module Google
   module Cloud
     module LifeSciences
       module V2beta
-        VERSION = "0.2.0"
+        VERSION = "0.4.0"
       end
     end
   end

data/lib/google/cloud/life_sciences/v2beta/workflows_service/client.rb

@@ -18,6 +18,7 @@
 
 require "google/cloud/errors"
 require "google/cloud/lifesciences/v2beta/workflows_pb"
+require "google/cloud/location"
 
 module Google
   module Cloud
@@ -140,6 +141,12 @@ module Google
                 config.endpoint = @config.endpoint
               end
 
+              @location_client = Google::Cloud::Location::Locations::Client.new do |config|
+                config.credentials = credentials
+                config.quota_project = @quota_project_id
+                config.endpoint = @config.endpoint
+              end
+
               @workflows_service_stub = ::Gapic::ServiceStub.new(
                 ::Google::Cloud::LifeSciences::V2beta::WorkflowsServiceV2Beta::Stub,
                 credentials:  credentials,
@@ -156,16 +163,23 @@ module Google
             #
             attr_reader :operations_client
 
+            ##
+            # Get the associated client for mix-in of the Locations.
+            #
+            # @return [Google::Cloud::Location::Locations::Client]
+            #
+            attr_reader :location_client
+
             # Service calls
 
             ##
             # Runs a pipeline.  The returned Operation's [metadata]
             # [google.longrunning.Operation.metadata] field will contain a
-            # {::Google::Cloud::LifeSciences::V2beta::Metadata google.cloud.lifesciences.v2beta.Metadata} object describing the status
-            # of the pipeline execution. The
+            # {::Google::Cloud::LifeSciences::V2beta::Metadata google.cloud.lifesciences.v2beta.Metadata}
+            # object describing the status of the pipeline execution. The
             # {::Google::Longrunning::Operation#response response} field will contain a
-            # {::Google::Cloud::LifeSciences::V2beta::RunPipelineResponse google.cloud.lifesciences.v2beta.RunPipelineResponse} object if the
-            # pipeline completes successfully.
+            # {::Google::Cloud::LifeSciences::V2beta::RunPipelineResponse google.cloud.lifesciences.v2beta.RunPipelineResponse}
+            # object if the pipeline completes successfully.
             #
             # **Note:** Before you can use this method, the *Life Sciences Service Agent*
             # must have access to your project. This is done automatically when the
@@ -229,14 +243,14 @@ module Google
             #   # Call the run_pipeline method.
             #   result = client.run_pipeline request
             #
-            #   # The returned object is of type Gapic::Operation. You can use this
-            #   # object to check the status of an operation, cancel it, or wait
-            #   # for results. Here is how to block until completion:
+            #   # The returned object is of type Gapic::Operation. You can use it to
+            #   # check the status of an operation, cancel it, or wait for results.
+            #   # Here is how to wait for a response.
             #   result.wait_until_done! timeout: 60
             #   if result.response?
             #     p result.response
             #   else
-            #     puts "Error!"
+            #     puts "No response received."
             #   end
             #
             def run_pipeline request, options = nil

data/lib/google/cloud/life_sciences/v2beta/workflows_service/operations.rb

@@ -158,13 +158,11 @@ module Google
             #   # Call the list_operations method.
             #   result = client.list_operations request
             #
-            #   # The returned object is of type Gapic::PagedEnumerable. You can
-            #   # iterate over all elements by calling #each, and the enumerable
-            #   # will lazily make API calls to fetch subsequent pages. Other
-            #   # methods are also available for managing paging directly.
-            #   result.each do |response|
+            #   # The returned object is of type Gapic::PagedEnumerable. You can iterate
+            #   # over elements, and API calls will be issued to fetch pages as needed.
+            #   result.each do |item|
             #     # Each element is of type ::Google::Longrunning::Operation.
-            #     p response
+            #     p item
             #   end
             #
             def list_operations request, options = nil
@@ -253,14 +251,14 @@ module Google
             #   # Call the get_operation method.
             #   result = client.get_operation request
             #
-            #   # The returned object is of type Gapic::Operation. You can use this
-            #   # object to check the status of an operation, cancel it, or wait
-            #   # for results. Here is how to block until completion:
+            #   # The returned object is of type Gapic::Operation. You can use it to
+            #   # check the status of an operation, cancel it, or wait for results.
+            #   # Here is how to wait for a response.
             #   result.wait_until_done! timeout: 60
             #   if result.response?
             #     p result.response
             #   else
-            #     puts "Error!"
+            #     puts "No response received."
             #   end
             #
             def get_operation request, options = nil
@@ -540,14 +538,14 @@ module Google
             #   # Call the wait_operation method.
             #   result = client.wait_operation request
             #
-            #   # The returned object is of type Gapic::Operation. You can use this
-            #   # object to check the status of an operation, cancel it, or wait
-            #   # for results. Here is how to block until completion:
+            #   # The returned object is of type Gapic::Operation. You can use it to
+            #   # check the status of an operation, cancel it, or wait for results.
+            #   # Here is how to wait for a response.
             #   result.wait_until_done! timeout: 60
             #   if result.response?
             #     p result.response
             #   else
-            #     puts "Error!"
+            #     puts "No response received."
             #   end
             #
             def wait_operation request, options = nil