google-api-client 0.9.pre3 → 0.9.pre4
This diff represents the content of publicly available package versions that have been released to one of the supported registries. The information contained in this diff is provided for informational purposes only and reflects changes between package versions as they appear in their respective public registries.
- checksums.yaml +4 -4
- data/.travis.yml +1 -0
- data/CHANGELOG.md +14 -2
- data/Gemfile +4 -0
- data/MIGRATING.md +1 -1
- data/README.md +17 -3
- data/api_names.yaml +127 -14
- data/api_names_out.yaml +5442 -710
- data/bin/generate-api +16 -14
- data/generated/google/apis/adexchangebuyer_v1_3.rb +1 -1
- data/generated/google/apis/adexchangebuyer_v1_3/classes.rb +213 -2
- data/generated/google/apis/adexchangebuyer_v1_3/representations.rb +71 -0
- data/generated/google/apis/adexchangebuyer_v1_3/service.rb +21 -42
- data/generated/google/apis/adexchangeseller_v2_0.rb +1 -1
- data/generated/google/apis/adexchangeseller_v2_0/service.rb +15 -29
- data/generated/google/apis/admin_datatransfer_v1.rb +37 -0
- data/generated/google/apis/admin_datatransfer_v1/classes.rb +267 -0
- data/generated/google/apis/admin_datatransfer_v1/representations.rb +118 -0
- data/generated/google/apis/admin_datatransfer_v1/service.rb +262 -0
- data/generated/google/apis/admin_directory_v1.rb +25 -1
- data/generated/google/apis/admin_directory_v1/classes.rb +718 -0
- data/generated/google/apis/admin_directory_v1/representations.rb +244 -0
- data/generated/google/apis/admin_directory_v1/service.rb +1522 -509
- data/generated/google/apis/admin_reports_v1.rb +1 -1
- data/generated/google/apis/admin_reports_v1/service.rb +5 -10
- data/generated/google/apis/adsense_v1_4.rb +1 -1
- data/generated/google/apis/adsense_v1_4/classes.rb +6 -0
- data/generated/google/apis/adsense_v1_4/representations.rb +1 -0
- data/generated/google/apis/adsense_v1_4/service.rb +40 -78
- data/generated/google/apis/adsensehost_v4_1.rb +1 -1
- data/generated/google/apis/adsensehost_v4_1/service.rb +26 -52
- data/generated/google/apis/analytics_v3.rb +1 -1
- data/generated/google/apis/analytics_v3/classes.rb +11 -13
- data/generated/google/apis/analytics_v3/service.rb +84 -158
- data/generated/google/apis/androidenterprise_v1.rb +2 -2
- data/generated/google/apis/androidenterprise_v1/classes.rb +276 -8
- data/generated/google/apis/androidenterprise_v1/representations.rb +106 -0
- data/generated/google/apis/androidenterprise_v1/service.rb +715 -97
- data/generated/google/apis/androidpublisher_v2.rb +1 -1
- data/generated/google/apis/androidpublisher_v2/classes.rb +2 -2
- data/generated/google/apis/androidpublisher_v2/service.rb +55 -107
- data/generated/google/apis/appengine_v1beta4.rb +35 -0
- data/generated/google/apis/appengine_v1beta4/classes.rb +1532 -0
- data/generated/google/apis/appengine_v1beta4/representations.rb +526 -0
- data/generated/google/apis/appengine_v1beta4/service.rb +476 -0
- data/generated/google/apis/appsactivity_v1.rb +1 -1
- data/generated/google/apis/appsactivity_v1/service.rb +1 -2
- data/generated/google/apis/appstate_v1.rb +1 -1
- data/generated/google/apis/appstate_v1/service.rb +6 -11
- data/generated/google/apis/autoscaler_v1beta2/service.rb +10 -20
- data/generated/google/apis/bigquery_v2.rb +4 -1
- data/generated/google/apis/bigquery_v2/classes.rb +231 -16
- data/generated/google/apis/bigquery_v2/representations.rb +62 -0
- data/generated/google/apis/bigquery_v2/service.rb +24 -45
- data/generated/google/apis/blogger_v3/service.rb +33 -66
- data/generated/google/apis/books_v1.rb +1 -1
- data/generated/google/apis/books_v1/classes.rb +441 -0
- data/generated/google/apis/books_v1/representations.rb +177 -0
- data/generated/google/apis/books_v1/service.rb +210 -90
- data/generated/google/apis/calendar_v3.rb +1 -1
- data/generated/google/apis/calendar_v3/classes.rb +34 -18
- data/generated/google/apis/calendar_v3/service.rb +118 -103
- data/generated/google/apis/civicinfo_v2.rb +1 -1
- data/generated/google/apis/civicinfo_v2/classes.rb +12 -3
- data/generated/google/apis/civicinfo_v2/representations.rb +1 -0
- data/generated/google/apis/civicinfo_v2/service.rb +5 -10
- data/generated/google/apis/classroom_v1.rb +49 -0
- data/generated/google/apis/classroom_v1/classes.rb +512 -0
- data/generated/google/apis/classroom_v1/representations.rb +217 -0
- data/generated/google/apis/classroom_v1/service.rb +970 -0
- data/generated/google/apis/cloudbilling_v1.rb +35 -0
- data/generated/google/apis/cloudbilling_v1/classes.rb +169 -0
- data/generated/google/apis/cloudbilling_v1/representations.rb +79 -0
- data/generated/google/apis/cloudbilling_v1/service.rb +258 -0
- data/generated/google/apis/clouddebugger_v2.rb +41 -0
- data/generated/google/apis/clouddebugger_v2/classes.rb +1004 -0
- data/generated/google/apis/clouddebugger_v2/representations.rb +410 -0
- data/generated/google/apis/clouddebugger_v2/service.rb +370 -0
- data/generated/google/apis/cloudmonitoring_v2beta2.rb +1 -1
- data/generated/google/apis/cloudmonitoring_v2beta2/service.rb +6 -12
- data/generated/google/apis/cloudresourcemanager_v1beta1.rb +5 -2
- data/generated/google/apis/cloudresourcemanager_v1beta1/classes.rb +173 -249
- data/generated/google/apis/cloudresourcemanager_v1beta1/representations.rb +36 -68
- data/generated/google/apis/cloudresourcemanager_v1beta1/service.rb +293 -80
- data/generated/google/apis/cloudtrace_v1.rb +35 -0
- data/generated/google/apis/cloudtrace_v1/classes.rb +188 -0
- data/generated/google/apis/cloudtrace_v1/representations.rb +92 -0
- data/generated/google/apis/cloudtrace_v1/service.rb +190 -0
- data/generated/google/apis/clouduseraccounts_beta.rb +43 -0
- data/generated/google/apis/clouduseraccounts_beta/classes.rb +823 -0
- data/generated/google/apis/clouduseraccounts_beta/representations.rb +313 -0
- data/generated/google/apis/clouduseraccounts_beta/service.rb +854 -0
- data/generated/google/apis/compute_beta.rb +49 -0
- data/generated/google/apis/compute_beta/classes.rb +9128 -0
- data/generated/google/apis/compute_beta/representations.rb +3048 -0
- data/generated/google/apis/compute_beta/service.rb +10154 -0
- data/generated/google/apis/compute_v1.rb +1 -1
- data/generated/google/apis/compute_v1/classes.rb +1305 -520
- data/generated/google/apis/compute_v1/representations.rb +122 -15
- data/generated/google/apis/compute_v1/service.rb +2202 -1085
- data/generated/google/apis/container_v1.rb +1 -1
- data/generated/google/apis/container_v1/classes.rb +56 -31
- data/generated/google/apis/container_v1/representations.rb +12 -0
- data/generated/google/apis/container_v1/service.rb +62 -41
- data/generated/google/apis/content_v2.rb +2 -2
- data/generated/google/apis/content_v2/classes.rb +2252 -56
- data/generated/google/apis/content_v2/representations.rb +917 -87
- data/generated/google/apis/content_v2/service.rb +680 -85
- data/generated/google/apis/coordinate_v1.rb +1 -1
- data/generated/google/apis/coordinate_v1/service.rb +16 -25
- data/generated/google/apis/customsearch_v1/service.rb +1 -2
- data/generated/google/apis/datastore_v1beta2.rb +1 -1
- data/generated/google/apis/datastore_v1beta2/service.rb +12 -18
- data/generated/google/apis/deploymentmanager_v2.rb +44 -0
- data/generated/google/apis/deploymentmanager_v2/classes.rb +1089 -0
- data/generated/google/apis/deploymentmanager_v2/representations.rb +422 -0
- data/generated/google/apis/deploymentmanager_v2/service.rb +857 -0
- data/generated/google/apis/deploymentmanager_v2beta2.rb +5 -2
- data/generated/google/apis/deploymentmanager_v2beta2/classes.rb +22 -3
- data/generated/google/apis/deploymentmanager_v2beta2/representations.rb +3 -0
- data/generated/google/apis/deploymentmanager_v2beta2/service.rb +14 -27
- data/generated/google/apis/dfareporting_v2_1.rb +1 -1
- data/generated/google/apis/dfareporting_v2_1/classes.rb +29 -14
- data/generated/google/apis/dfareporting_v2_1/service.rb +196 -389
- data/generated/google/apis/discovery_v1/classes.rb +7 -0
- data/generated/google/apis/discovery_v1/representations.rb +1 -0
- data/generated/google/apis/discovery_v1/service.rb +2 -4
- data/generated/google/apis/dns_v1.rb +4 -1
- data/generated/google/apis/dns_v1/service.rb +9 -18
- data/generated/google/apis/doubleclickbidmanager_v1.rb +1 -1
- data/generated/google/apis/doubleclickbidmanager_v1/classes.rb +9 -2
- data/generated/google/apis/doubleclickbidmanager_v1/representations.rb +1 -0
- data/generated/google/apis/doubleclickbidmanager_v1/service.rb +8 -16
- data/generated/google/apis/doubleclicksearch_v2.rb +1 -1
- data/generated/google/apis/doubleclicksearch_v2/classes.rb +15 -6
- data/generated/google/apis/doubleclicksearch_v2/representations.rb +1 -0
- data/generated/google/apis/doubleclicksearch_v2/service.rb +13 -23
- data/generated/google/apis/drive_v2.rb +1 -1
- data/generated/google/apis/drive_v2/classes.rb +73 -30
- data/generated/google/apis/drive_v2/representations.rb +14 -0
- data/generated/google/apis/drive_v2/service.rb +139 -135
- data/generated/google/apis/drive_v3.rb +55 -0
- data/generated/google/apis/drive_v3/classes.rb +1534 -0
- data/generated/google/apis/drive_v3/representations.rb +497 -0
- data/generated/google/apis/drive_v3/service.rb +1541 -0
- data/generated/google/apis/fitness_v1.rb +1 -1
- data/generated/google/apis/fitness_v1/service.rb +14 -27
- data/generated/google/apis/fusiontables_v2/service.rb +40 -73
- data/generated/google/apis/games_configuration_v1configuration.rb +1 -1
- data/generated/google/apis/games_configuration_v1configuration/service.rb +14 -27
- data/generated/google/apis/games_management_v1management.rb +37 -0
- data/generated/google/apis/games_management_v1management/classes.rb +524 -0
- data/generated/google/apis/games_management_v1management/representations.rb +231 -0
- data/generated/google/apis/games_management_v1management/service.rb +994 -0
- data/generated/google/apis/games_v1.rb +1 -1
- data/generated/google/apis/games_v1/classes.rb +39 -0
- data/generated/google/apis/games_v1/representations.rb +14 -0
- data/generated/google/apis/games_v1/service.rb +93 -109
- data/generated/google/apis/gan_v1beta1/service.rb +10 -20
- data/generated/google/apis/genomics_v1.rb +5 -3
- data/generated/google/apis/genomics_v1/classes.rb +519 -200
- data/generated/google/apis/genomics_v1/representations.rb +126 -13
- data/generated/google/apis/genomics_v1/service.rb +392 -236
- data/generated/google/apis/gmail_v1.rb +4 -1
- data/generated/google/apis/gmail_v1/service.rb +39 -71
- data/generated/google/apis/groupsmigration_v1/service.rb +2 -3
- data/generated/google/apis/groupssettings_v1/service.rb +3 -6
- data/generated/google/apis/identitytoolkit_v3.rb +1 -1
- data/generated/google/apis/identitytoolkit_v3/classes.rb +125 -0
- data/generated/google/apis/identitytoolkit_v3/representations.rb +37 -0
- data/generated/google/apis/identitytoolkit_v3/service.rb +44 -24
- data/generated/google/apis/kgsearch_v1.rb +32 -0
- data/generated/google/apis/kgsearch_v1/classes.rb +59 -0
- data/generated/google/apis/kgsearch_v1/representations.rb +39 -0
- data/generated/google/apis/kgsearch_v1/service.rb +111 -0
- data/generated/google/apis/licensing_v1.rb +1 -1
- data/generated/google/apis/licensing_v1/service.rb +7 -14
- data/generated/google/apis/logging_v1beta3.rb +16 -4
- data/generated/google/apis/logging_v1beta3/classes.rb +620 -46
- data/generated/google/apis/logging_v1beta3/representations.rb +144 -0
- data/generated/google/apis/logging_v1beta3/service.rb +435 -104
- data/generated/google/apis/manager_v1beta2.rb +3 -0
- data/generated/google/apis/manager_v1beta2/service.rb +8 -16
- data/generated/google/apis/mapsengine_v1.rb +1 -1
- data/generated/google/apis/mapsengine_v1/service.rb +85 -162
- data/generated/google/apis/mirror_v1.rb +1 -1
- data/generated/google/apis/mirror_v1/service.rb +28 -52
- data/generated/google/apis/oauth2_v2.rb +1 -1
- data/generated/google/apis/oauth2_v2/service.rb +4 -8
- data/generated/google/apis/pagespeedonline_v2/service.rb +1 -2
- data/generated/google/apis/partners_v2.rb +32 -0
- data/generated/google/apis/partners_v2/classes.rb +942 -0
- data/generated/google/apis/partners_v2/representations.rb +402 -0
- data/generated/google/apis/partners_v2/service.rb +400 -0
- data/generated/google/apis/plus_domains_v1.rb +1 -1
- data/generated/google/apis/plus_domains_v1/classes.rb +207 -0
- data/generated/google/apis/plus_domains_v1/representations.rb +114 -0
- data/generated/google/apis/plus_domains_v1/service.rb +21 -41
- data/generated/google/apis/plus_v1.rb +1 -1
- data/generated/google/apis/plus_v1/classes.rb +207 -0
- data/generated/google/apis/plus_v1/representations.rb +114 -0
- data/generated/google/apis/plus_v1/service.rb +11 -56
- data/generated/google/apis/prediction_v1_6.rb +1 -1
- data/generated/google/apis/prediction_v1_6/service.rb +8 -16
- data/generated/google/apis/proximitybeacon_v1beta1.rb +31 -0
- data/generated/google/apis/proximitybeacon_v1beta1/classes.rb +639 -0
- data/generated/google/apis/proximitybeacon_v1beta1/representations.rb +274 -0
- data/generated/google/apis/proximitybeacon_v1beta1/service.rb +591 -0
- data/generated/google/apis/pubsub_v1.rb +37 -0
- data/generated/google/apis/pubsub_v1/classes.rb +614 -0
- data/generated/google/apis/pubsub_v1/representations.rb +281 -0
- data/generated/google/apis/pubsub_v1/service.rb +774 -0
- data/generated/google/apis/pubsub_v1beta2.rb +1 -1
- data/generated/google/apis/pubsub_v1beta2/classes.rb +78 -283
- data/generated/google/apis/pubsub_v1beta2/representations.rb +1 -85
- data/generated/google/apis/pubsub_v1beta2/service.rb +79 -87
- data/generated/google/apis/qpx_express_v1/service.rb +1 -2
- data/generated/google/apis/replicapool_v1beta2.rb +3 -0
- data/generated/google/apis/replicapool_v1beta2/service.rb +12 -24
- data/generated/google/apis/replicapoolupdater_v1beta1.rb +4 -1
- data/generated/google/apis/replicapoolupdater_v1beta1/classes.rb +46 -2
- data/generated/google/apis/replicapoolupdater_v1beta1/representations.rb +16 -0
- data/generated/google/apis/replicapoolupdater_v1beta1/service.rb +58 -18
- data/generated/google/apis/reseller_v1.rb +1 -1
- data/generated/google/apis/reseller_v1/classes.rb +19 -1
- data/generated/google/apis/reseller_v1/representations.rb +1 -0
- data/generated/google/apis/reseller_v1/service.rb +16 -30
- data/generated/google/apis/resourceviews_v1beta2.rb +3 -0
- data/generated/google/apis/resourceviews_v1beta2/service.rb +16 -27
- data/generated/google/apis/script_v1.rb +61 -0
- data/generated/google/apis/script_v1/classes.rb +259 -0
- data/generated/google/apis/script_v1/representations.rb +106 -0
- data/generated/google/apis/script_v1/service.rb +98 -0
- data/generated/google/apis/site_verification_v1.rb +1 -1
- data/generated/google/apis/site_verification_v1/service.rb +8 -15
- data/generated/google/apis/sqladmin_v1beta4.rb +1 -1
- data/generated/google/apis/sqladmin_v1beta4/classes.rb +186 -2
- data/generated/google/apis/sqladmin_v1beta4/representations.rb +70 -0
- data/generated/google/apis/sqladmin_v1beta4/service.rb +166 -75
- data/generated/google/apis/storage_v1.rb +5 -2
- data/generated/google/apis/storage_v1/classes.rb +47 -4
- data/generated/google/apis/storage_v1/representations.rb +18 -0
- data/generated/google/apis/storage_v1/service.rb +77 -94
- data/generated/google/apis/storagetransfer_v1.rb +35 -0
- data/generated/google/apis/storagetransfer_v1/classes.rb +1046 -0
- data/generated/google/apis/storagetransfer_v1/representations.rb +370 -0
- data/generated/google/apis/storagetransfer_v1/service.rb +473 -0
- data/generated/google/apis/tagmanager_v1.rb +1 -1
- data/generated/google/apis/tagmanager_v1/classes.rb +189 -31
- data/generated/google/apis/tagmanager_v1/representations.rb +69 -15
- data/generated/google/apis/tagmanager_v1/service.rb +114 -275
- data/generated/google/apis/taskqueue_v1beta2/service.rb +8 -16
- data/generated/google/apis/tasks_v1/service.rb +14 -28
- data/generated/google/apis/translate_v2/service.rb +3 -6
- data/generated/google/apis/urlshortener_v1/service.rb +3 -6
- data/generated/google/apis/webmasters_v3.rb +3 -3
- data/generated/google/apis/webmasters_v3/classes.rb +4 -4
- data/generated/google/apis/webmasters_v3/service.rb +16 -30
- data/generated/google/apis/youtube_analytics_v1.rb +1 -1
- data/generated/google/apis/youtube_analytics_v1/classes.rb +6 -0
- data/generated/google/apis/youtube_analytics_v1/representations.rb +1 -0
- data/generated/google/apis/youtube_analytics_v1/service.rb +16 -21
- data/generated/google/apis/youtube_v3.rb +1 -1
- data/generated/google/apis/youtube_v3/classes.rb +111 -78
- data/generated/google/apis/youtube_v3/representations.rb +2 -0
- data/generated/google/apis/youtube_v3/service.rb +78 -246
- data/generated/google/apis/youtubereporting_v1.rb +38 -0
- data/generated/google/apis/youtubereporting_v1/classes.rb +258 -0
- data/generated/google/apis/youtubereporting_v1/representations.rb +128 -0
- data/generated/google/apis/youtubereporting_v1/service.rb +364 -0
- data/google-api-client.gemspec +3 -3
- data/lib/google/api_client/auth/installed_app.rb +2 -2
- data/lib/google/api_client/auth/key_utils.rb +1 -0
- data/lib/google/api_client/auth/storage.rb +1 -0
- data/lib/google/api_client/auth/storages/file_store.rb +1 -0
- data/lib/google/api_client/auth/storages/redis_store.rb +1 -0
- data/lib/google/api_client/client_secrets.rb +4 -5
- data/lib/google/apis/core/api_command.rb +2 -2
- data/lib/google/apis/core/base_service.rb +1 -0
- data/lib/google/apis/core/batch.rb +25 -8
- data/lib/google/apis/core/download.rb +1 -1
- data/lib/google/apis/core/http_command.rb +24 -12
- data/lib/google/apis/core/multipart.rb +20 -6
- data/lib/google/apis/core/upload.rb +11 -4
- data/lib/google/apis/generator/annotator.rb +29 -10
- data/lib/google/apis/generator/helpers.rb +1 -1
- data/lib/google/apis/generator/templates/_method.tmpl +5 -6
- data/lib/google/apis/options.rb +7 -3
- data/lib/google/apis/version.rb +1 -1
- data/samples/calendar/calendar.rb +1 -1
- data/samples/drive/drive.rb +9 -2
- data/samples/pubsub/pubsub.rb +5 -6
- data/samples/translate/translate.rb +1 -5
- data/script/generate +20 -5
- data/spec/fixtures/files/child/.gitignore +0 -0
- data/spec/fixtures/files/invalid.json +1 -0
- data/spec/google/api_client/client_secrets_spec.rb +38 -1
- data/spec/google/apis/core/batch_spec.rb +22 -8
- data/spec/google/apis/core/download_spec.rb +13 -0
- data/spec/google/apis/core/http_command_spec.rb +26 -9
- data/spec/google/apis/core/upload_spec.rb +65 -17
- data/spec/google/apis/options_spec.rb +8 -0
- data/spec/integration_tests/adsense_spec.rb +28 -0
- data/spec/integration_tests/pubsub_spec.rb +3 -3
- data/spec/spec_helper.rb +5 -1
- data/third_party/hurley_patches.rb +103 -0
- metadata +87 -7
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def get_advertiser(role, role_id, advertiser_id: nil, fields: nil, quota_user: nil, user_ip: nil, options: nil, &block)
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def list_advertisers(role, role_id, advertiser_category: nil, max_results: nil, min_ninety_day_epc: nil, min_payout_rank: nil, min_seven_day_epc: nil, page_token: nil, relationship_status: nil, fields: nil, quota_user: nil, user_ip: nil, options: nil, &block)
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def list_links(role, role_id, advertiser_id: nil, asset_size: nil, authorship: nil, create_date_max: nil, create_date_min: nil, link_type: nil, max_results: nil, page_token: nil, promotion_type: nil, relationship_status: nil, search_text: nil, start_date_max: nil, start_date_min: nil, fields: nil, quota_user: nil, user_ip: nil, options: nil, &block)
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def list_publishers(role, role_id, max_results: nil, min_ninety_day_epc: nil, min_payout_rank: nil, min_seven_day_epc: nil, page_token: nil, publisher_category: nil, relationship_status: nil, fields: nil, quota_user: nil, user_ip: nil, options: nil, &block)
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def get_report(role, role_id, report_type, advertiser_id: nil, calculate_totals: nil, end_date: nil, event_type: nil, link_id: nil, max_results: nil, order_id: nil, publisher_id: nil, start_date: nil, start_index: nil, status: nil, fields: nil, quota_user: nil, user_ip: nil, options: nil, &block)
|
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|
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|
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|
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module Apis
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# Genomics API
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#
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# An API to store, process, explore, and share
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# based
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# An API to store, process, explore, and share genomic data. It supports
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# reference-based alignements, genetic variants, and reference genomes. This API
|
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# GA4GH) v0.5.1 API as well as several extensions.
|
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#
|
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# @see
|
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module GenomicsV1
|
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|
VERSION = 'V1'
|
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REVISION = '
|
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|
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# View and manage your data in Google BigQuery
|
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AUTH_BIGQUERY = 'https://www.googleapis.com/auth/bigquery'
|
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@@ -49,7 +49,9 @@ module Google
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end
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end
|
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# A Dataset is a collection of genomic data.
|
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# A Dataset is a collection of genomic data. For more genomics resource
|
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# definitions, see [Fundamentals of Google Genomics](https://cloud.google.com/
|
|
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|
+
# genomics/fundamentals-of-google-genomics)
|
|
53
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|
class Dataset
|
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|
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|
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|
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@@ -116,6 +118,175 @@ module Google
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# Request message for `SetIamPolicy` method.
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class SetIamPolicyRequest
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|
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|
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# Defines an Identity and Access Management (IAM) policy. It is used to specify
|
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# access control policies for Cloud Platform resources. A `Policy` consists of a
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# list of `bindings`. A `Binding` binds a list of `members` to a `role`, where
|
|
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|
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# accounts. A `role` is a named list of permissions defined by IAM. **Example** `
|
|
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# "bindings": [ ` "role": "roles/owner", "members": [ "user:mike@example.com", "
|
|
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|
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# group:admins@example.com", "domain:google.com", "serviceAccount:my-other-app@
|
|
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|
+
# appspot.gserviceaccount.com"] `, ` "role": "roles/viewer", "members": ["user:
|
|
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|
+
# sean@example.com"] ` ] ` For a description of IAM and its features, see the [
|
|
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|
+
# IAM developer's guide](https://cloud.google.com/iam).
|
|
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|
+
# Corresponds to the JSON property `policy`
|
|
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|
+
# @return [Google::Apis::GenomicsV1::Policy]
|
|
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|
+
attr_accessor :policy
|
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|
+
|
|
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|
+
def initialize(**args)
|
|
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|
+
update!(**args)
|
|
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|
+
end
|
|
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|
+
|
|
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|
+
# Update properties of this object
|
|
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|
+
def update!(**args)
|
|
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|
+
@policy = args[:policy] unless args[:policy].nil?
|
|
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|
+
end
|
|
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|
+
end
|
|
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|
+
|
|
149
|
+
# Defines an Identity and Access Management (IAM) policy. It is used to specify
|
|
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|
+
# access control policies for Cloud Platform resources. A `Policy` consists of a
|
|
151
|
+
# list of `bindings`. A `Binding` binds a list of `members` to a `role`, where
|
|
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|
+
# the members can be user accounts, Google groups, Google domains, and service
|
|
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|
+
# accounts. A `role` is a named list of permissions defined by IAM. **Example** `
|
|
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|
+
# "bindings": [ ` "role": "roles/owner", "members": [ "user:mike@example.com", "
|
|
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|
+
# group:admins@example.com", "domain:google.com", "serviceAccount:my-other-app@
|
|
156
|
+
# appspot.gserviceaccount.com"] `, ` "role": "roles/viewer", "members": ["user:
|
|
157
|
+
# sean@example.com"] ` ] ` For a description of IAM and its features, see the [
|
|
158
|
+
# IAM developer's guide](https://cloud.google.com/iam).
|
|
159
|
+
class Policy
|
|
160
|
+
include Google::Apis::Core::Hashable
|
|
161
|
+
|
|
162
|
+
# Version of the `Policy`. The default version is 0.
|
|
163
|
+
# Corresponds to the JSON property `version`
|
|
164
|
+
# @return [Fixnum]
|
|
165
|
+
attr_accessor :version
|
|
166
|
+
|
|
167
|
+
# Associates a list of `members` to a `role`. Multiple `bindings` must not be
|
|
168
|
+
# specified for the same `role`. `bindings` with no members will result in an
|
|
169
|
+
# error.
|
|
170
|
+
# Corresponds to the JSON property `bindings`
|
|
171
|
+
# @return [Array<Google::Apis::GenomicsV1::Binding>]
|
|
172
|
+
attr_accessor :bindings
|
|
173
|
+
|
|
174
|
+
# `etag` is used for optimistic concurrency control as a way to help prevent
|
|
175
|
+
# simultaneous updates of a policy from overwriting each other. It is strongly
|
|
176
|
+
# suggested that systems make use of the `etag` in the read-modify-write cycle
|
|
177
|
+
# to perform policy updates in order to avoid race conditions: An `etag` is
|
|
178
|
+
# returned in the response to `getIamPolicy`, and systems are expected to put
|
|
179
|
+
# that etag in the request to `setIamPolicy` to ensure that their change will be
|
|
180
|
+
# applied to the same version of the policy. If no `etag` is provided in the
|
|
181
|
+
# call to `setIamPolicy`, then the existing policy is overwritten blindly.
|
|
182
|
+
# Corresponds to the JSON property `etag`
|
|
183
|
+
# @return [String]
|
|
184
|
+
attr_accessor :etag
|
|
185
|
+
|
|
186
|
+
def initialize(**args)
|
|
187
|
+
update!(**args)
|
|
188
|
+
end
|
|
189
|
+
|
|
190
|
+
# Update properties of this object
|
|
191
|
+
def update!(**args)
|
|
192
|
+
@version = args[:version] unless args[:version].nil?
|
|
193
|
+
@bindings = args[:bindings] unless args[:bindings].nil?
|
|
194
|
+
@etag = args[:etag] unless args[:etag].nil?
|
|
195
|
+
end
|
|
196
|
+
end
|
|
197
|
+
|
|
198
|
+
# Associates `members` with a `role`.
|
|
199
|
+
class Binding
|
|
200
|
+
include Google::Apis::Core::Hashable
|
|
201
|
+
|
|
202
|
+
# Role that is assigned to `members`. For example, `roles/viewer`, `roles/editor`
|
|
203
|
+
# , or `roles/owner`. Required
|
|
204
|
+
# Corresponds to the JSON property `role`
|
|
205
|
+
# @return [String]
|
|
206
|
+
attr_accessor :role
|
|
207
|
+
|
|
208
|
+
# Specifies the identities requesting access for a Cloud Platform resource. `
|
|
209
|
+
# members` can have the following values: * `allUsers`: A special identifier
|
|
210
|
+
# that represents anyone who is on the internet; with or without a Google
|
|
211
|
+
# account. * `allAuthenticatedUsers`: A special identifier that represents
|
|
212
|
+
# anyone who is authenticated with a Google account or a service account. * `
|
|
213
|
+
# user:`emailid``: An email address that represents a specific Google account.
|
|
214
|
+
# For example, `alice@gmail.com` or `joe@example.com`. * `serviceAccount:`
|
|
215
|
+
# emailid``: An email address that represents a service account. For example, `
|
|
216
|
+
# my-other-app@appspot.gserviceaccount.com`. * `group:`emailid``: An email
|
|
217
|
+
# address that represents a Google group. For example, `admins@example.com`. * `
|
|
218
|
+
# domain:`domain``: A Google Apps domain name that represents all the users of
|
|
219
|
+
# that domain. For example, `google.com` or `example.com`.
|
|
220
|
+
# Corresponds to the JSON property `members`
|
|
221
|
+
# @return [Array<String>]
|
|
222
|
+
attr_accessor :members
|
|
223
|
+
|
|
224
|
+
def initialize(**args)
|
|
225
|
+
update!(**args)
|
|
226
|
+
end
|
|
227
|
+
|
|
228
|
+
# Update properties of this object
|
|
229
|
+
def update!(**args)
|
|
230
|
+
@role = args[:role] unless args[:role].nil?
|
|
231
|
+
@members = args[:members] unless args[:members].nil?
|
|
232
|
+
end
|
|
233
|
+
end
|
|
234
|
+
|
|
235
|
+
# Request message for `GetIamPolicy` method.
|
|
236
|
+
class GetIamPolicyRequest
|
|
237
|
+
include Google::Apis::Core::Hashable
|
|
238
|
+
|
|
239
|
+
def initialize(**args)
|
|
240
|
+
update!(**args)
|
|
241
|
+
end
|
|
242
|
+
|
|
243
|
+
# Update properties of this object
|
|
244
|
+
def update!(**args)
|
|
245
|
+
end
|
|
246
|
+
end
|
|
247
|
+
|
|
248
|
+
# Request message for `TestIamPermissions` method.
|
|
249
|
+
class TestIamPermissionsRequest
|
|
250
|
+
include Google::Apis::Core::Hashable
|
|
251
|
+
|
|
252
|
+
# REQUIRED: The set of permissions to check for the 'resource'. Permissions with
|
|
253
|
+
# wildcards (such as '*' or 'storage.*') are not allowed. Allowed permissions
|
|
254
|
+
# are: * `genomics.datasets.create` * `genomics.datasets.delete` * `genomics.
|
|
255
|
+
# datasets.get` * `genomics.datasets.list` * `genomics.datasets.update` * `
|
|
256
|
+
# genomics.datasets.getIamPolicy` * `genomics.datasets.setIamPolicy`
|
|
257
|
+
# Corresponds to the JSON property `permissions`
|
|
258
|
+
# @return [Array<String>]
|
|
259
|
+
attr_accessor :permissions
|
|
260
|
+
|
|
261
|
+
def initialize(**args)
|
|
262
|
+
update!(**args)
|
|
263
|
+
end
|
|
264
|
+
|
|
265
|
+
# Update properties of this object
|
|
266
|
+
def update!(**args)
|
|
267
|
+
@permissions = args[:permissions] unless args[:permissions].nil?
|
|
268
|
+
end
|
|
269
|
+
end
|
|
270
|
+
|
|
271
|
+
# Response message for `TestIamPermissions` method.
|
|
272
|
+
class TestIamPermissionsResponse
|
|
273
|
+
include Google::Apis::Core::Hashable
|
|
274
|
+
|
|
275
|
+
# A subset of `TestPermissionsRequest.permissions` that the caller is allowed.
|
|
276
|
+
# Corresponds to the JSON property `permissions`
|
|
277
|
+
# @return [Array<String>]
|
|
278
|
+
attr_accessor :permissions
|
|
279
|
+
|
|
280
|
+
def initialize(**args)
|
|
281
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|
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|
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|
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# Operations.ListOperations].
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|
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|
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|
|
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|
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# A list of URIs pointing at BAM files
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|
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# A list of URIs pointing at [BAM files](https://samtools.github.io/hts-specs/
|
|
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|
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# SAMv1.pdf) in Google Cloud Storage.
|
|
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|
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|
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|
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|
|
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|
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|
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|
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|
|
|
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|
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# Required. The Google Developers Console project ID that owns this export.
|
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|
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# Required. The Google Developers Console project ID that owns this export. The
|
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|
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# caller must have WRITE access to this project.
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|
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|
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|
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|
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|
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|
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#
|
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|
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#
|
|
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|
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|
|
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|
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# defaults to 256. The maximum value is 1024.
|
|
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578
|
# Corresponds to the JSON property `pageSize`
|
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579
|
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580
|
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|
|
@@ -456,7 +623,9 @@ module Google
|
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|
# of reads produced by a sequencer. A read group set typically models reads
|
|
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624
|
# corresponding to one sample, sequenced one way, and aligned one way. * A read
|
|
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625
|
# group set belongs to one dataset. * A read group belongs to one read group set.
|
|
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|
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# * A read belongs to one read group.
|
|
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|
+
# * A read belongs to one read group. For more genomics resource definitions,
|
|
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|
+
# see [Fundamentals of Google Genomics](https://cloud.google.com/genomics/
|
|
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|
+
# fundamentals-of-google-genomics)
|
|
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629
|
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|
|
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630
|
include Google::Apis::Core::Hashable
|
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631
|
|
|
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|
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|
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|
|
|
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|
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# The dataset
|
|
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|
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# The dataset to which this read group set belongs.
|
|
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|
# Corresponds to the JSON property `datasetId`
|
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|
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|
|
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|
attr_accessor :dataset_id
|
|
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|
|
|
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|
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# The reference set the reads in this read group set are aligned
|
|
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|
+
# The reference set to which the reads in this read group set are aligned.
|
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|
# Corresponds to the JSON property `referenceSetId`
|
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|
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|
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|
attr_accessor :reference_set_id
|
|
@@ -518,13 +687,12 @@ module Google
|
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|
include Google::Apis::Core::Hashable
|
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688
|
|
|
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689
|
# The server-generated read group ID, unique for all read groups. Note: This is
|
|
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|
-
# different than the
|
|
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|
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# name` field.
|
|
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|
+
# different than the @RG ID field in the SAM spec. For that value, see name.
|
|
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691
|
# Corresponds to the JSON property `id`
|
|
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692
|
# @return [String]
|
|
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693
|
attr_accessor :id
|
|
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694
|
|
|
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|
-
# The
|
|
695
|
+
# The dataset to which this read group belongs.
|
|
528
696
|
# Corresponds to the JSON property `datasetId`
|
|
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697
|
# @return [String]
|
|
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698
|
attr_accessor :dataset_id
|
|
@@ -539,9 +707,7 @@ module Google
|
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707
|
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|
|
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708
|
attr_accessor :description
|
|
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709
|
|
|
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|
-
#
|
|
543
|
-
# actual ID within this repository, but rather an identifier for a sample which
|
|
544
|
-
# may be meaningful to some external system.
|
|
710
|
+
# A client-supplied sample identifier for the reads in this read group.
|
|
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711
|
# Corresponds to the JSON property `sampleId`
|
|
546
712
|
# @return [String]
|
|
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713
|
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|
|
@@ -564,8 +730,7 @@ module Google
|
|
|
564
730
|
# @return [Array<Google::Apis::GenomicsV1::Program>]
|
|
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731
|
attr_accessor :programs
|
|
566
732
|
|
|
567
|
-
# The reference set the reads in this read group are aligned to.
|
|
568
|
-
# there are any read alignments.
|
|
733
|
+
# The reference set the reads in this read group are aligned to.
|
|
569
734
|
# Corresponds to the JSON property `referenceSetId`
|
|
570
735
|
# @return [String]
|
|
571
736
|
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|
|
@@ -599,16 +764,17 @@ module Google
|
|
|
599
764
|
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|
|
600
765
|
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|
|
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766
|
|
|
602
|
-
#
|
|
603
|
-
#
|
|
604
|
-
#
|
|
767
|
+
# A client-supplied library identifier; a library is a collection of DNA
|
|
768
|
+
# fragments which have been prepared for sequencing from a sample. This field is
|
|
769
|
+
# important for quality control as error or bias can be introduced during sample
|
|
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|
+
# preparation.
|
|
605
771
|
# Corresponds to the JSON property `libraryId`
|
|
606
772
|
# @return [String]
|
|
607
773
|
attr_accessor :library_id
|
|
608
774
|
|
|
609
|
-
# The platform unit used as part of this experiment
|
|
610
|
-
# for Illumina or slide for SOLiD. Corresponds to the @RG PU field
|
|
611
|
-
# spec.
|
|
775
|
+
# The platform unit used as part of this experiment, for example flowcell-
|
|
776
|
+
# barcode.lane for Illumina or slide for SOLiD. Corresponds to the @RG PU field
|
|
777
|
+
# in the SAM spec.
|
|
612
778
|
# Corresponds to the JSON property `platformUnit`
|
|
613
779
|
# @return [String]
|
|
614
780
|
attr_accessor :platform_unit
|
|
@@ -619,7 +785,7 @@ module Google
|
|
|
619
785
|
attr_accessor :sequencing_center
|
|
620
786
|
|
|
621
787
|
# The instrument model used as part of this experiment. This maps to sequencing
|
|
622
|
-
# technology in
|
|
788
|
+
# technology in the SAM spec.
|
|
623
789
|
# Corresponds to the JSON property `instrumentModel`
|
|
624
790
|
# @return [String]
|
|
625
791
|
attr_accessor :instrument_model
|
|
@@ -652,7 +818,8 @@ module Google
|
|
|
652
818
|
# @return [String]
|
|
653
819
|
attr_accessor :id
|
|
654
820
|
|
|
655
|
-
# The name of the program.
|
|
821
|
+
# The display name of the program. This is typically the colloquial name of the
|
|
822
|
+
# tool used, for example 'bwa' or 'picard'.
|
|
656
823
|
# Corresponds to the JSON property `name`
|
|
657
824
|
# @return [String]
|
|
658
825
|
attr_accessor :name
|
|
@@ -797,8 +964,9 @@ module Google
|
|
|
797
964
|
# @return [Array<String>]
|
|
798
965
|
attr_accessor :read_group_ids
|
|
799
966
|
|
|
800
|
-
# The reference sequence name, for example `chr1`, `1`, or `chrX`. If set to
|
|
801
|
-
# only unmapped reads are returned.
|
|
967
|
+
# The reference sequence name, for example `chr1`, `1`, or `chrX`. If set to `*`,
|
|
968
|
+
# only unmapped reads are returned. If unspecified, all reads (mapped and
|
|
969
|
+
# unmapped) are returned.
|
|
802
970
|
# Corresponds to the JSON property `referenceName`
|
|
803
971
|
# @return [String]
|
|
804
972
|
attr_accessor :reference_name
|
|
@@ -822,8 +990,8 @@ module Google
|
|
|
822
990
|
# @return [String]
|
|
823
991
|
attr_accessor :page_token
|
|
824
992
|
|
|
825
|
-
#
|
|
826
|
-
#
|
|
993
|
+
# The maximum number of results to return in a single page. If unspecified,
|
|
994
|
+
# defaults to 256. The maximum value is 2048.
|
|
827
995
|
# Corresponds to the JSON property `pageSize`
|
|
828
996
|
# @return [Fixnum]
|
|
829
997
|
attr_accessor :page_size
|
|
@@ -850,7 +1018,7 @@ module Google
|
|
|
850
1018
|
|
|
851
1019
|
# The list of matching alignments sorted by mapped genomic coordinate, if any,
|
|
852
1020
|
# ascending in position within the same reference. Unmapped reads, which have no
|
|
853
|
-
# position, are returned
|
|
1021
|
+
# position, are returned contiguously and are sorted in ascending lexicographic
|
|
854
1022
|
# order by fragment name.
|
|
855
1023
|
# Corresponds to the JSON property `alignments`
|
|
856
1024
|
# @return [Array<Google::Apis::GenomicsV1::Read>]
|
|
@@ -874,17 +1042,31 @@ module Google
|
|
|
874
1042
|
end
|
|
875
1043
|
end
|
|
876
1044
|
|
|
877
|
-
# A read alignment describes a linear alignment of a string of DNA to a
|
|
878
|
-
# reference sequence
|
|
879
|
-
#
|
|
880
|
-
#
|
|
881
|
-
#
|
|
882
|
-
# [google.genomics
|
|
883
|
-
#
|
|
884
|
-
#
|
|
885
|
-
#
|
|
886
|
-
#
|
|
887
|
-
#
|
|
1045
|
+
# A read alignment describes a linear alignment of a string of DNA to a
|
|
1046
|
+
# reference sequence, in addition to metadata about the fragment (the molecule
|
|
1047
|
+
# of DNA sequenced) and the read (the bases which were read by the sequencer). A
|
|
1048
|
+
# read is equivalent to a line in a SAM file. A read belongs to exactly one read
|
|
1049
|
+
# group and exactly one read group set. For more genomics resource definitions,
|
|
1050
|
+
# see [Fundamentals of Google Genomics](https://cloud.google.com/genomics/
|
|
1051
|
+
# fundamentals-of-google-genomics) ### Reverse-stranded reads Mapped reads (
|
|
1052
|
+
# reads having a non-null `alignment`) can be aligned to either the forward or
|
|
1053
|
+
# the reverse strand of their associated reference. Strandedness of a mapped
|
|
1054
|
+
# read is encoded by `alignment.position.reverseStrand`. If we consider the
|
|
1055
|
+
# reference to be a forward-stranded coordinate space of `[0, reference.length)`
|
|
1056
|
+
# with `0` as the left-most position and `reference.length` as the right-most
|
|
1057
|
+
# position, reads are always aligned left to right. That is, `alignment.position.
|
|
1058
|
+
# position` always refers to the left-most reference coordinate and `alignment.
|
|
1059
|
+
# cigar` describes the alignment of this read to the reference from left to
|
|
1060
|
+
# right. All per-base fields such as `alignedSequence` and `alignedQuality`
|
|
1061
|
+
# share this same left-to-right orientation; this is true of reads which are
|
|
1062
|
+
# aligned to either strand. For reverse-stranded reads, this means that `
|
|
1063
|
+
# alignedSequence` is the reverse complement of the bases that were originally
|
|
1064
|
+
# reported by the sequencing machine. ### Generating a reference-aligned
|
|
1065
|
+
# sequence string When interacting with mapped reads, it's often useful to
|
|
1066
|
+
# produce a string representing the local alignment of the read to reference.
|
|
1067
|
+
# The following pseudocode demonstrates one way of doing this: out = "" offset =
|
|
1068
|
+
# 0 for c in read.alignment.cigar ` switch c.operation ` case "ALIGNMENT_MATCH",
|
|
1069
|
+
# "SEQUENCE_MATCH", "SEQUENCE_MISMATCH": out += read.alignedSequence[offset:
|
|
888
1070
|
# offset+c.operationLength] offset += c.operationLength break case "CLIP_SOFT", "
|
|
889
1071
|
# INSERT": offset += c.operationLength break case "PAD": out += repeat("*", c.
|
|
890
1072
|
# operationLength) break case "DELETE": out += repeat("-", c.operationLength)
|
|
@@ -905,14 +1087,15 @@ module Google
|
|
|
905
1087
|
# @return [String]
|
|
906
1088
|
attr_accessor :id
|
|
907
1089
|
|
|
908
|
-
# The ID of the read group this read belongs to.
|
|
909
|
-
#
|
|
1090
|
+
# The ID of the read group this read belongs to. A read belongs to exactly one
|
|
1091
|
+
# read group. This is a server-generated ID which is distinct from SAM's RG tag (
|
|
1092
|
+
# for that value, see ReadGroup.name).
|
|
910
1093
|
# Corresponds to the JSON property `readGroupId`
|
|
911
1094
|
# @return [String]
|
|
912
1095
|
attr_accessor :read_group_id
|
|
913
1096
|
|
|
914
|
-
# The ID of the read group set this read belongs to.
|
|
915
|
-
#
|
|
1097
|
+
# The ID of the read group set this read belongs to. A read belongs to exactly
|
|
1098
|
+
# one read group set.
|
|
916
1099
|
# Corresponds to the JSON property `readGroupSetId`
|
|
917
1100
|
# @return [String]
|
|
918
1101
|
attr_accessor :read_group_set_id
|
|
@@ -923,13 +1106,13 @@ module Google
|
|
|
923
1106
|
attr_accessor :fragment_name
|
|
924
1107
|
|
|
925
1108
|
# The orientation and the distance between reads from the fragment are
|
|
926
|
-
# consistent with the sequencing protocol (SAM flag 0x2)
|
|
1109
|
+
# consistent with the sequencing protocol (SAM flag 0x2).
|
|
927
1110
|
# Corresponds to the JSON property `properPlacement`
|
|
928
1111
|
# @return [Boolean]
|
|
929
1112
|
attr_accessor :proper_placement
|
|
930
1113
|
alias_method :proper_placement?, :proper_placement
|
|
931
1114
|
|
|
932
|
-
# The fragment is a PCR or optical duplicate (SAM flag 0x400)
|
|
1115
|
+
# The fragment is a PCR or optical duplicate (SAM flag 0x400).
|
|
933
1116
|
# Corresponds to the JSON property `duplicateFragment`
|
|
934
1117
|
# @return [Boolean]
|
|
935
1118
|
attr_accessor :duplicate_fragment
|
|
@@ -951,7 +1134,8 @@ module Google
|
|
|
951
1134
|
# @return [Fixnum]
|
|
952
1135
|
attr_accessor :number_reads
|
|
953
1136
|
|
|
954
|
-
#
|
|
1137
|
+
# Whether this read did not pass filters, such as platform or vendor quality
|
|
1138
|
+
# controls (SAM flag 0x200).
|
|
955
1139
|
# Corresponds to the JSON property `failedVendorQualityChecks`
|
|
956
1140
|
# @return [Boolean]
|
|
957
1141
|
attr_accessor :failed_vendor_quality_checks
|
|
@@ -989,22 +1173,22 @@ module Google
|
|
|
989
1173
|
attr_accessor :supplementary_alignment
|
|
990
1174
|
alias_method :supplementary_alignment?, :supplementary_alignment
|
|
991
1175
|
|
|
992
|
-
# The bases of the read sequence contained in this alignment record,
|
|
993
|
-
# CIGAR operations applied
|
|
994
|
-
# shorter than the full read sequence and quality. This
|
|
995
|
-
# alignment is part of a chimeric alignment, or if the read
|
|
996
|
-
# this occurs, the CIGAR for this read will begin/end with a
|
|
997
|
-
# that will indicate the length of the excised sequence.
|
|
1176
|
+
# The bases of the read sequence contained in this alignment record, **without
|
|
1177
|
+
# CIGAR operations applied** (equivalent to SEQ in SAM). `alignedSequence` and `
|
|
1178
|
+
# alignedQuality` may be shorter than the full read sequence and quality. This
|
|
1179
|
+
# will occur if the alignment is part of a chimeric alignment, or if the read
|
|
1180
|
+
# was trimmed. When this occurs, the CIGAR for this read will begin/end with a
|
|
1181
|
+
# hard clip operator that will indicate the length of the excised sequence.
|
|
998
1182
|
# Corresponds to the JSON property `alignedSequence`
|
|
999
1183
|
# @return [String]
|
|
1000
1184
|
attr_accessor :aligned_sequence
|
|
1001
1185
|
|
|
1002
|
-
# The quality of the read sequence contained in this alignment record
|
|
1003
|
-
# alignedSequence` and `alignedQuality` may be
|
|
1004
|
-
# sequence and quality. This will occur if the
|
|
1005
|
-
# alignment, or if the read was trimmed. When
|
|
1006
|
-
# read will begin/end with a hard clip operator
|
|
1007
|
-
# the excised sequence.
|
|
1186
|
+
# The quality of the read sequence contained in this alignment record (
|
|
1187
|
+
# equivalent to QUAL in SAM). `alignedSequence` and `alignedQuality` may be
|
|
1188
|
+
# shorter than the full read sequence and quality. This will occur if the
|
|
1189
|
+
# alignment is part of a chimeric alignment, or if the read was trimmed. When
|
|
1190
|
+
# this occurs, the CIGAR for this read will begin/end with a hard clip operator
|
|
1191
|
+
# that will indicate the length of the excised sequence.
|
|
1008
1192
|
# Corresponds to the JSON property `alignedQuality`
|
|
1009
1193
|
# @return [Array<Fixnum>]
|
|
1010
1194
|
attr_accessor :aligned_quality
|
|
@@ -1063,7 +1247,8 @@ module Google
|
|
|
1063
1247
|
attr_accessor :position
|
|
1064
1248
|
|
|
1065
1249
|
# The mapping quality of this alignment. Represents how likely the read maps to
|
|
1066
|
-
# this position as opposed to other locations.
|
|
1250
|
+
# this position as opposed to other locations. Specifically, this is -10 log10
|
|
1251
|
+
# Pr(mapping position is wrong), rounded to the nearest integer.
|
|
1067
1252
|
# Corresponds to the JSON property `mappingQuality`
|
|
1068
1253
|
# @return [Fixnum]
|
|
1069
1254
|
attr_accessor :mapping_quality
|
|
@@ -1155,21 +1340,84 @@ module Google
|
|
|
1155
1340
|
end
|
|
1156
1341
|
end
|
|
1157
1342
|
|
|
1343
|
+
# The stream reads request.
|
|
1344
|
+
class StreamReadsRequest
|
|
1345
|
+
include Google::Apis::Core::Hashable
|
|
1346
|
+
|
|
1347
|
+
# The Google Developers Console project ID or number which will be billed for
|
|
1348
|
+
# this access. The caller must have WRITE access to this project. Required.
|
|
1349
|
+
# Corresponds to the JSON property `projectId`
|
|
1350
|
+
# @return [String]
|
|
1351
|
+
attr_accessor :project_id
|
|
1352
|
+
|
|
1353
|
+
# The ID of the read group set from which to stream reads.
|
|
1354
|
+
# Corresponds to the JSON property `readGroupSetId`
|
|
1355
|
+
# @return [String]
|
|
1356
|
+
attr_accessor :read_group_set_id
|
|
1357
|
+
|
|
1358
|
+
# The reference sequence name, for example `chr1`, `1`, or `chrX`. If set to *,
|
|
1359
|
+
# only unmapped reads are returned.
|
|
1360
|
+
# Corresponds to the JSON property `referenceName`
|
|
1361
|
+
# @return [String]
|
|
1362
|
+
attr_accessor :reference_name
|
|
1363
|
+
|
|
1364
|
+
# The start position of the range on the reference, 0-based inclusive. If
|
|
1365
|
+
# specified, `referenceName` must also be specified.
|
|
1366
|
+
# Corresponds to the JSON property `start`
|
|
1367
|
+
# @return [String]
|
|
1368
|
+
attr_accessor :start
|
|
1369
|
+
|
|
1370
|
+
# The end position of the range on the reference, 0-based exclusive. If
|
|
1371
|
+
# specified, `referenceName` must also be specified.
|
|
1372
|
+
# Corresponds to the JSON property `end`
|
|
1373
|
+
# @return [String]
|
|
1374
|
+
attr_accessor :end
|
|
1375
|
+
|
|
1376
|
+
def initialize(**args)
|
|
1377
|
+
update!(**args)
|
|
1378
|
+
end
|
|
1379
|
+
|
|
1380
|
+
# Update properties of this object
|
|
1381
|
+
def update!(**args)
|
|
1382
|
+
@project_id = args[:project_id] unless args[:project_id].nil?
|
|
1383
|
+
@read_group_set_id = args[:read_group_set_id] unless args[:read_group_set_id].nil?
|
|
1384
|
+
@reference_name = args[:reference_name] unless args[:reference_name].nil?
|
|
1385
|
+
@start = args[:start] unless args[:start].nil?
|
|
1386
|
+
@end = args[:end] unless args[:end].nil?
|
|
1387
|
+
end
|
|
1388
|
+
end
|
|
1389
|
+
|
|
1390
|
+
#
|
|
1391
|
+
class StreamReadsResponse
|
|
1392
|
+
include Google::Apis::Core::Hashable
|
|
1393
|
+
|
|
1394
|
+
#
|
|
1395
|
+
# Corresponds to the JSON property `alignments`
|
|
1396
|
+
# @return [Array<Google::Apis::GenomicsV1::Read>]
|
|
1397
|
+
attr_accessor :alignments
|
|
1398
|
+
|
|
1399
|
+
def initialize(**args)
|
|
1400
|
+
update!(**args)
|
|
1401
|
+
end
|
|
1402
|
+
|
|
1403
|
+
# Update properties of this object
|
|
1404
|
+
def update!(**args)
|
|
1405
|
+
@alignments = args[:alignments] unless args[:alignments].nil?
|
|
1406
|
+
end
|
|
1407
|
+
end
|
|
1408
|
+
|
|
1158
1409
|
#
|
|
1159
1410
|
class SearchReferenceSetsRequest
|
|
1160
1411
|
include Google::Apis::Core::Hashable
|
|
1161
1412
|
|
|
1162
|
-
# If present, return
|
|
1163
|
-
# ReferenceSet.md5checksum` for details.
|
|
1413
|
+
# If present, return reference sets for which the md5checksum matches exactly.
|
|
1164
1414
|
# Corresponds to the JSON property `md5checksums`
|
|
1165
1415
|
# @return [Array<String>]
|
|
1166
1416
|
attr_accessor :md5checksums
|
|
1167
1417
|
|
|
1168
|
-
# If present, return
|
|
1169
|
-
#
|
|
1170
|
-
#
|
|
1171
|
-
# accession will be returned, whichever version. Note that different versions
|
|
1172
|
-
# will have different sequences.
|
|
1418
|
+
# If present, return reference sets for which a prefix of any of
|
|
1419
|
+
# sourceAccessions match any of these strings. Accession numbers typically have
|
|
1420
|
+
# a main number and a version, for example `NC_000001.11`.
|
|
1173
1421
|
# Corresponds to the JSON property `accessions`
|
|
1174
1422
|
# @return [Array<String>]
|
|
1175
1423
|
attr_accessor :accessions
|
|
@@ -1187,7 +1435,8 @@ module Google
|
|
|
1187
1435
|
# @return [String]
|
|
1188
1436
|
attr_accessor :page_token
|
|
1189
1437
|
|
|
1190
|
-
#
|
|
1438
|
+
# The maximum number of results to return in a single page. If unspecified,
|
|
1439
|
+
# defaults to 1024. The maximum value is 4096.
|
|
1191
1440
|
# Corresponds to the JSON property `pageSize`
|
|
1192
1441
|
# @return [Fixnum]
|
|
1193
1442
|
attr_accessor :page_size
|
|
@@ -1237,7 +1486,9 @@ module Google
|
|
|
1237
1486
|
# assembly for a species, such as `GRCh38` which is representative of the human
|
|
1238
1487
|
# genome. A reference set defines a common coordinate space for comparing
|
|
1239
1488
|
# reference-aligned experimental data. A reference set contains 1 or more
|
|
1240
|
-
# references.
|
|
1489
|
+
# references. For more genomics resource definitions, see [Fundamentals of
|
|
1490
|
+
# Google Genomics](https://cloud.google.com/genomics/fundamentals-of-google-
|
|
1491
|
+
# genomics)
|
|
1241
1492
|
class ReferenceSet
|
|
1242
1493
|
include Google::Apis::Core::Hashable
|
|
1243
1494
|
|
|
@@ -1261,11 +1512,11 @@ module Google
|
|
|
1261
1512
|
# @return [String]
|
|
1262
1513
|
attr_accessor :md5checksum
|
|
1263
1514
|
|
|
1264
|
-
# ID from http://www.ncbi.nlm.nih.gov/taxonomy (
|
|
1265
|
-
# species which this
|
|
1266
|
-
# references may specify a different `ncbiTaxonId`, as assemblies
|
|
1267
|
-
# reference sequences which do not belong to the modeled species,
|
|
1268
|
-
# human reference genome.
|
|
1515
|
+
# ID from http://www.ncbi.nlm.nih.gov/taxonomy (for example, 9606 for human)
|
|
1516
|
+
# indicating the species which this reference set is intended to model. Note
|
|
1517
|
+
# that contained references may specify a different `ncbiTaxonId`, as assemblies
|
|
1518
|
+
# may contain reference sequences which do not belong to the modeled species,
|
|
1519
|
+
# for example EBV in a human reference genome.
|
|
1269
1520
|
# Corresponds to the JSON property `ncbiTaxonId`
|
|
1270
1521
|
# @return [Fixnum]
|
|
1271
1522
|
attr_accessor :ncbi_taxon_id
|
|
@@ -1312,17 +1563,14 @@ module Google
|
|
|
1312
1563
|
class SearchReferencesRequest
|
|
1313
1564
|
include Google::Apis::Core::Hashable
|
|
1314
1565
|
|
|
1315
|
-
# If present, return references for which the
|
|
1316
|
-
# Reference.md5checksum` for construction details.
|
|
1566
|
+
# If present, return references for which the md5checksum matches exactly.
|
|
1317
1567
|
# Corresponds to the JSON property `md5checksums`
|
|
1318
1568
|
# @return [Array<String>]
|
|
1319
1569
|
attr_accessor :md5checksums
|
|
1320
1570
|
|
|
1321
|
-
# If present, return references for which
|
|
1322
|
-
#
|
|
1323
|
-
#
|
|
1324
|
-
# be returned, whichever version. Note that different versions will have
|
|
1325
|
-
# different sequences.
|
|
1571
|
+
# If present, return references for which a prefix of any of sourceAccessions
|
|
1572
|
+
# match any of these strings. Accession numbers typically have a main number and
|
|
1573
|
+
# a version, for example `GCF_000001405.26`.
|
|
1326
1574
|
# Corresponds to the JSON property `accessions`
|
|
1327
1575
|
# @return [Array<String>]
|
|
1328
1576
|
attr_accessor :accessions
|
|
@@ -1339,7 +1587,8 @@ module Google
|
|
|
1339
1587
|
# @return [String]
|
|
1340
1588
|
attr_accessor :page_token
|
|
1341
1589
|
|
|
1342
|
-
#
|
|
1590
|
+
# The maximum number of results to return in a single page. If unspecified,
|
|
1591
|
+
# defaults to 1024. The maximum value is 4096.
|
|
1343
1592
|
# Corresponds to the JSON property `pageSize`
|
|
1344
1593
|
# @return [Fixnum]
|
|
1345
1594
|
attr_accessor :page_size
|
|
@@ -1388,7 +1637,9 @@ module Google
|
|
|
1388
1637
|
# A reference is a canonical assembled DNA sequence, intended to act as a
|
|
1389
1638
|
# reference coordinate space for other genomic annotations. A single reference
|
|
1390
1639
|
# might represent the human chromosome 1 or mitochandrial DNA, for instance. A
|
|
1391
|
-
# reference belongs to one or more reference sets.
|
|
1640
|
+
# reference belongs to one or more reference sets. For more genomics resource
|
|
1641
|
+
# definitions, see [Fundamentals of Google Genomics](https://cloud.google.com/
|
|
1642
|
+
# genomics/fundamentals-of-google-genomics)
|
|
1392
1643
|
class Reference
|
|
1393
1644
|
include Google::Apis::Core::Hashable
|
|
1394
1645
|
|
|
@@ -1414,8 +1665,8 @@ module Google
|
|
|
1414
1665
|
# @return [String]
|
|
1415
1666
|
attr_accessor :name
|
|
1416
1667
|
|
|
1417
|
-
# The URI from which the sequence was obtained.
|
|
1418
|
-
#
|
|
1668
|
+
# The URI from which the sequence was obtained. Typically specifies a FASTA
|
|
1669
|
+
# format file.
|
|
1419
1670
|
# Corresponds to the JSON property `sourceUri`
|
|
1420
1671
|
# @return [String]
|
|
1421
1672
|
attr_accessor :source_uri
|
|
@@ -1426,8 +1677,7 @@ module Google
|
|
|
1426
1677
|
# @return [Array<String>]
|
|
1427
1678
|
attr_accessor :source_accessions
|
|
1428
1679
|
|
|
1429
|
-
# ID from http://www.ncbi.nlm.nih.gov/taxonomy
|
|
1430
|
-
# specified by the containing reference set.
|
|
1680
|
+
# ID from http://www.ncbi.nlm.nih.gov/taxonomy. For example, 9606 for human.
|
|
1431
1681
|
# Corresponds to the JSON property `ncbiTaxonId`
|
|
1432
1682
|
# @return [Fixnum]
|
|
1433
1683
|
attr_accessor :ncbi_taxon_id
|
|
@@ -1530,7 +1780,9 @@ module Google
|
|
|
1530
1780
|
end
|
|
1531
1781
|
|
|
1532
1782
|
# A variant set is a collection of call sets and variants. It contains summary
|
|
1533
|
-
# statistics of those contents. A variant set belongs to a dataset.
|
|
1783
|
+
# statistics of those contents. A variant set belongs to a dataset. For more
|
|
1784
|
+
# genomics resource definitions, see [Fundamentals of Google Genomics](https://
|
|
1785
|
+
# cloud.google.com/genomics/fundamentals-of-google-genomics)
|
|
1534
1786
|
class VariantSet
|
|
1535
1787
|
include Google::Apis::Core::Hashable
|
|
1536
1788
|
|
|
@@ -1544,6 +1796,18 @@ module Google
|
|
|
1544
1796
|
# @return [String]
|
|
1545
1797
|
attr_accessor :id
|
|
1546
1798
|
|
|
1799
|
+
# The reference set to which the variant set is mapped. The reference set
|
|
1800
|
+
# describes the alignment provenance of the variant set, while the `
|
|
1801
|
+
# referenceBounds` describe the shape of the actual variant data. The reference
|
|
1802
|
+
# set's reference names are a superset of those found in the `referenceBounds`.
|
|
1803
|
+
# For example, given a variant set that is mapped to the GRCh38 reference set
|
|
1804
|
+
# and contains a single variant on reference 'X', `referenceBounds` would
|
|
1805
|
+
# contain only an entry for 'X', while the associated reference set enumerates
|
|
1806
|
+
# all possible references: '1', '2', 'X', 'Y', 'MT', etc.
|
|
1807
|
+
# Corresponds to the JSON property `referenceSetId`
|
|
1808
|
+
# @return [String]
|
|
1809
|
+
attr_accessor :reference_set_id
|
|
1810
|
+
|
|
1547
1811
|
# A list of all references used by the variants in a variant set with associated
|
|
1548
1812
|
# coordinate upper bounds for each one.
|
|
1549
1813
|
# Corresponds to the JSON property `referenceBounds`
|
|
@@ -1563,6 +1827,7 @@ module Google
|
|
|
1563
1827
|
def update!(**args)
|
|
1564
1828
|
@dataset_id = args[:dataset_id] unless args[:dataset_id].nil?
|
|
1565
1829
|
@id = args[:id] unless args[:id].nil?
|
|
1830
|
+
@reference_set_id = args[:reference_set_id] unless args[:reference_set_id].nil?
|
|
1566
1831
|
@reference_bounds = args[:reference_bounds] unless args[:reference_bounds].nil?
|
|
1567
1832
|
@metadata = args[:metadata] unless args[:metadata].nil?
|
|
1568
1833
|
end
|
|
@@ -1573,7 +1838,7 @@ module Google
|
|
|
1573
1838
|
class ReferenceBound
|
|
1574
1839
|
include Google::Apis::Core::Hashable
|
|
1575
1840
|
|
|
1576
|
-
# The
|
|
1841
|
+
# The name of the reference associated with this ReferenceBound.
|
|
1577
1842
|
# Corresponds to the JSON property `referenceName`
|
|
1578
1843
|
# @return [String]
|
|
1579
1844
|
attr_accessor :reference_name
|
|
@@ -1626,7 +1891,7 @@ module Google
|
|
|
1626
1891
|
# The number of values that can be included in a field described by this
|
|
1627
1892
|
# metadata.
|
|
1628
1893
|
# Corresponds to the JSON property `number`
|
|
1629
|
-
# @return [
|
|
1894
|
+
# @return [String]
|
|
1630
1895
|
attr_accessor :number
|
|
1631
1896
|
|
|
1632
1897
|
# A textual description of this metadata.
|
|
@@ -1721,7 +1986,8 @@ module Google
|
|
|
1721
1986
|
# @return [String]
|
|
1722
1987
|
attr_accessor :page_token
|
|
1723
1988
|
|
|
1724
|
-
# The maximum number of
|
|
1989
|
+
# The maximum number of results to return in a single page. If unspecified,
|
|
1990
|
+
# defaults to 1024.
|
|
1725
1991
|
# Corresponds to the JSON property `pageSize`
|
|
1726
1992
|
# @return [Fixnum]
|
|
1727
1993
|
attr_accessor :page_size
|
|
@@ -1813,14 +2079,16 @@ module Google
|
|
|
1813
2079
|
# @return [String]
|
|
1814
2080
|
attr_accessor :page_token
|
|
1815
2081
|
|
|
1816
|
-
# The maximum number of variants to return. If unspecified,
|
|
2082
|
+
# The maximum number of variants to return in a single page. If unspecified,
|
|
2083
|
+
# defaults to 5000. The maximum value is 10000.
|
|
1817
2084
|
# Corresponds to the JSON property `pageSize`
|
|
1818
2085
|
# @return [Fixnum]
|
|
1819
2086
|
attr_accessor :page_size
|
|
1820
2087
|
|
|
1821
|
-
# The maximum number of calls to return
|
|
1822
|
-
#
|
|
1823
|
-
# defaults to 5000.
|
|
2088
|
+
# The maximum number of calls to return in a single page. Note that this limit
|
|
2089
|
+
# may be exceeded; at least one variant is always returned per page, even if it
|
|
2090
|
+
# has more calls than this limit. If unspecified, defaults to 5000. The maximum
|
|
2091
|
+
# value is 10000.
|
|
1824
2092
|
# Corresponds to the JSON property `maxCalls`
|
|
1825
2093
|
# @return [Fixnum]
|
|
1826
2094
|
attr_accessor :max_calls
|
|
@@ -1872,11 +2140,12 @@ module Google
|
|
|
1872
2140
|
|
|
1873
2141
|
# A variant represents a change in DNA sequence relative to a reference sequence.
|
|
1874
2142
|
# For example, a variant could represent a SNP or an insertion. Variants belong
|
|
1875
|
-
# to a variant set.
|
|
1876
|
-
#
|
|
1877
|
-
#
|
|
1878
|
-
#
|
|
1879
|
-
#
|
|
2143
|
+
# to a variant set. For more genomics resource definitions, see [Fundamentals of
|
|
2144
|
+
# Google Genomics](https://cloud.google.com/genomics/fundamentals-of-google-
|
|
2145
|
+
# genomics) Each of the calls on a variant represent a determination of genotype
|
|
2146
|
+
# with respect to that variant. For example, a call might assign probability of
|
|
2147
|
+
# 0.32 to the occurrence of a SNP named rs1234 in a sample named NA12345. A call
|
|
2148
|
+
# belongs to a call set, which contains related calls typically from one sample.
|
|
1880
2149
|
class Variant
|
|
1881
2150
|
include Google::Apis::Core::Hashable
|
|
1882
2151
|
|
|
@@ -2043,31 +2312,6 @@ module Google
|
|
|
2043
2312
|
end
|
|
2044
2313
|
end
|
|
2045
2314
|
|
|
2046
|
-
#
|
|
2047
|
-
class MergeVariantsRequest
|
|
2048
|
-
include Google::Apis::Core::Hashable
|
|
2049
|
-
|
|
2050
|
-
# The destination variant set.
|
|
2051
|
-
# Corresponds to the JSON property `variantSetId`
|
|
2052
|
-
# @return [String]
|
|
2053
|
-
attr_accessor :variant_set_id
|
|
2054
|
-
|
|
2055
|
-
# The variants to be merged with existing variants.
|
|
2056
|
-
# Corresponds to the JSON property `variants`
|
|
2057
|
-
# @return [Array<Google::Apis::GenomicsV1::Variant>]
|
|
2058
|
-
attr_accessor :variants
|
|
2059
|
-
|
|
2060
|
-
def initialize(**args)
|
|
2061
|
-
update!(**args)
|
|
2062
|
-
end
|
|
2063
|
-
|
|
2064
|
-
# Update properties of this object
|
|
2065
|
-
def update!(**args)
|
|
2066
|
-
@variant_set_id = args[:variant_set_id] unless args[:variant_set_id].nil?
|
|
2067
|
-
@variants = args[:variants] unless args[:variants].nil?
|
|
2068
|
-
end
|
|
2069
|
-
end
|
|
2070
|
-
|
|
2071
2315
|
# The call set search request.
|
|
2072
2316
|
class SearchCallSetsRequest
|
|
2073
2317
|
include Google::Apis::Core::Hashable
|
|
@@ -2090,7 +2334,8 @@ module Google
|
|
|
2090
2334
|
# @return [String]
|
|
2091
2335
|
attr_accessor :page_token
|
|
2092
2336
|
|
|
2093
|
-
# The maximum number of
|
|
2337
|
+
# The maximum number of results to return in a single page. If unspecified,
|
|
2338
|
+
# defaults to 1024.
|
|
2094
2339
|
# Corresponds to the JSON property `pageSize`
|
|
2095
2340
|
# @return [Fixnum]
|
|
2096
2341
|
attr_accessor :page_size
|
|
@@ -2136,7 +2381,9 @@ module Google
|
|
|
2136
2381
|
end
|
|
2137
2382
|
|
|
2138
2383
|
# A call set is a collection of variant calls, typically for one sample. It
|
|
2139
|
-
# belongs to a variant set.
|
|
2384
|
+
# belongs to a variant set. For more genomics resource definitions, see [
|
|
2385
|
+
# Fundamentals of Google Genomics](https://cloud.google.com/genomics/
|
|
2386
|
+
# fundamentals-of-google-genomics)
|
|
2140
2387
|
class CallSet
|
|
2141
2388
|
include Google::Apis::Core::Hashable
|
|
2142
2389
|
|
|
@@ -2189,6 +2436,78 @@ module Google
|
|
|
2189
2436
|
end
|
|
2190
2437
|
end
|
|
2191
2438
|
|
|
2439
|
+
# The stream variants request.
|
|
2440
|
+
class StreamVariantsRequest
|
|
2441
|
+
include Google::Apis::Core::Hashable
|
|
2442
|
+
|
|
2443
|
+
# The Google Developers Console project ID or number which will be billed for
|
|
2444
|
+
# this access. The caller must have WRITE access to this project. Required.
|
|
2445
|
+
# Corresponds to the JSON property `projectId`
|
|
2446
|
+
# @return [String]
|
|
2447
|
+
attr_accessor :project_id
|
|
2448
|
+
|
|
2449
|
+
# The variant set ID from which to stream variants.
|
|
2450
|
+
# Corresponds to the JSON property `variantSetId`
|
|
2451
|
+
# @return [String]
|
|
2452
|
+
attr_accessor :variant_set_id
|
|
2453
|
+
|
|
2454
|
+
# Only return variant calls which belong to call sets with these IDs. Leaving
|
|
2455
|
+
# this blank returns all variant calls.
|
|
2456
|
+
# Corresponds to the JSON property `callSetIds`
|
|
2457
|
+
# @return [Array<String>]
|
|
2458
|
+
attr_accessor :call_set_ids
|
|
2459
|
+
|
|
2460
|
+
# Required. Only return variants in this reference sequence.
|
|
2461
|
+
# Corresponds to the JSON property `referenceName`
|
|
2462
|
+
# @return [String]
|
|
2463
|
+
attr_accessor :reference_name
|
|
2464
|
+
|
|
2465
|
+
# The beginning of the window (0-based, inclusive) for which overlapping
|
|
2466
|
+
# variants should be returned.
|
|
2467
|
+
# Corresponds to the JSON property `start`
|
|
2468
|
+
# @return [String]
|
|
2469
|
+
attr_accessor :start
|
|
2470
|
+
|
|
2471
|
+
# The end of the window (0-based, exclusive) for which overlapping variants
|
|
2472
|
+
# should be returned.
|
|
2473
|
+
# Corresponds to the JSON property `end`
|
|
2474
|
+
# @return [String]
|
|
2475
|
+
attr_accessor :end
|
|
2476
|
+
|
|
2477
|
+
def initialize(**args)
|
|
2478
|
+
update!(**args)
|
|
2479
|
+
end
|
|
2480
|
+
|
|
2481
|
+
# Update properties of this object
|
|
2482
|
+
def update!(**args)
|
|
2483
|
+
@project_id = args[:project_id] unless args[:project_id].nil?
|
|
2484
|
+
@variant_set_id = args[:variant_set_id] unless args[:variant_set_id].nil?
|
|
2485
|
+
@call_set_ids = args[:call_set_ids] unless args[:call_set_ids].nil?
|
|
2486
|
+
@reference_name = args[:reference_name] unless args[:reference_name].nil?
|
|
2487
|
+
@start = args[:start] unless args[:start].nil?
|
|
2488
|
+
@end = args[:end] unless args[:end].nil?
|
|
2489
|
+
end
|
|
2490
|
+
end
|
|
2491
|
+
|
|
2492
|
+
#
|
|
2493
|
+
class StreamVariantsResponse
|
|
2494
|
+
include Google::Apis::Core::Hashable
|
|
2495
|
+
|
|
2496
|
+
#
|
|
2497
|
+
# Corresponds to the JSON property `variants`
|
|
2498
|
+
# @return [Array<Google::Apis::GenomicsV1::Variant>]
|
|
2499
|
+
attr_accessor :variants
|
|
2500
|
+
|
|
2501
|
+
def initialize(**args)
|
|
2502
|
+
update!(**args)
|
|
2503
|
+
end
|
|
2504
|
+
|
|
2505
|
+
# Update properties of this object
|
|
2506
|
+
def update!(**args)
|
|
2507
|
+
@variants = args[:variants] unless args[:variants].nil?
|
|
2508
|
+
end
|
|
2509
|
+
end
|
|
2510
|
+
|
|
2192
2511
|
# The read group set import response.
|
|
2193
2512
|
class ImportReadGroupSetsResponse
|
|
2194
2513
|
include Google::Apis::Core::Hashable
|
|
@@ -2212,7 +2531,7 @@ module Google
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class ImportVariantsResponse
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include Google::Apis::Core::Hashable
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-
# IDs of the call sets
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+
# IDs of the call sets created during the import.
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# Corresponds to the JSON property `callSetIds`
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# @return [Array<String>]
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attr_accessor :call_set_ids
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@@ -2227,7 +2546,7 @@ module Google
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end
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end
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-
# Metadata describing an
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+
# Metadata describing an Operation.
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class OperationMetadata
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include Google::Apis::Core::Hashable
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@@ -2267,7 +2586,7 @@ module Google
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end
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end
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-
# An event that occurred during an
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+
# An event that occurred during an Operation.
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class OperationEvent
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include Google::Apis::Core::Hashable
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