google-api-client 0.9.4 → 0.9.5
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- checksums.yaml +4 -4
- data/CHANGELOG.md +5 -0
- data/README.md +34 -0
- data/api_names.yaml +3 -0
- data/api_names_out.yaml +1058 -20
- data/bin/generate-api +1 -1
- data/generated/google/apis/adexchangebuyer_v1_4.rb +1 -1
- data/generated/google/apis/adexchangebuyer_v1_4/classes.rb +203 -6
- data/generated/google/apis/adexchangebuyer_v1_4/representations.rb +78 -0
- data/generated/google/apis/adexchangebuyer_v1_4/service.rb +36 -0
- data/generated/google/apis/admin_directory_v1.rb +1 -1
- data/generated/google/apis/adsense_v1_4.rb +1 -1
- data/generated/google/apis/adsensehost_v4_1.rb +1 -1
- data/generated/google/apis/androidenterprise_v1.rb +2 -3
- data/generated/google/apis/androidenterprise_v1/classes.rb +11 -4
- data/generated/google/apis/androidenterprise_v1/representations.rb +1 -0
- data/generated/google/apis/androidenterprise_v1/service.rb +5 -6
- data/generated/google/apis/androidpublisher_v2.rb +1 -1
- data/generated/google/apis/androidpublisher_v2/classes.rb +47 -0
- data/generated/google/apis/androidpublisher_v2/representations.rb +6 -0
- data/generated/google/apis/appengine_v1beta5.rb +2 -3
- data/generated/google/apis/appengine_v1beta5/classes.rb +143 -8
- data/generated/google/apis/appengine_v1beta5/representations.rb +42 -0
- data/generated/google/apis/appengine_v1beta5/service.rb +48 -6
- data/generated/google/apis/appstate_v1.rb +1 -1
- data/generated/google/apis/bigquery_v2.rb +1 -1
- data/generated/google/apis/bigquery_v2/classes.rb +68 -14
- data/generated/google/apis/bigquery_v2/representations.rb +30 -0
- data/generated/google/apis/books_v1.rb +1 -1
- data/generated/google/apis/books_v1/classes.rb +68 -3
- data/generated/google/apis/books_v1/representations.rb +21 -0
- data/generated/google/apis/calendar_v3.rb +2 -2
- data/generated/google/apis/calendar_v3/service.rb +1 -1
- data/generated/google/apis/cloudbuild_v1.rb +1 -1
- data/generated/google/apis/cloudmonitoring_v2beta2.rb +1 -1
- data/generated/google/apis/cloudresourcemanager_v1.rb +1 -1
- data/generated/google/apis/cloudresourcemanager_v1/service.rb +2 -2
- data/generated/google/apis/cloudresourcemanager_v1beta1.rb +1 -1
- data/generated/google/apis/cloudresourcemanager_v1beta1/service.rb +2 -2
- data/generated/google/apis/clouduseraccounts_beta.rb +1 -1
- data/generated/google/apis/clouduseraccounts_beta/classes.rb +1 -1
- data/generated/google/apis/compute_beta.rb +1 -1
- data/generated/google/apis/compute_beta/classes.rb +138 -108
- data/generated/google/apis/compute_beta/representations.rb +16 -18
- data/generated/google/apis/compute_beta/service.rb +52 -2
- data/generated/google/apis/compute_v1.rb +1 -1
- data/generated/google/apis/compute_v1/classes.rb +55 -74
- data/generated/google/apis/compute_v1/representations.rb +14 -18
- data/generated/google/apis/compute_v1/service.rb +45 -1
- data/generated/google/apis/container_v1.rb +3 -3
- data/generated/google/apis/container_v1/classes.rb +200 -42
- data/generated/google/apis/container_v1/representations.rb +54 -0
- data/generated/google/apis/container_v1/service.rb +31 -30
- data/generated/google/apis/content_v2.rb +1 -1
- data/generated/google/apis/datastore_v1beta2.rb +2 -2
- data/generated/google/apis/datastore_v1beta2/service.rb +1 -1
- data/generated/google/apis/deploymentmanager_v2.rb +2 -3
- data/generated/google/apis/deploymentmanager_v2/classes.rb +7 -1
- data/generated/google/apis/deploymentmanager_v2/representations.rb +1 -0
- data/generated/google/apis/deploymentmanager_v2/service.rb +26 -27
- data/generated/google/apis/dfareporting_v2_3.rb +2 -2
- data/generated/google/apis/dfareporting_v2_3/classes.rb +1 -1
- data/generated/google/apis/dfareporting_v2_3/service.rb +2 -2
- data/generated/google/apis/dns_v1.rb +1 -1
- data/generated/google/apis/doubleclicksearch_v2.rb +1 -1
- data/generated/google/apis/doubleclicksearch_v2/classes.rb +6 -4
- data/generated/google/apis/drive_v2.rb +1 -1
- data/generated/google/apis/drive_v2/classes.rb +10 -4
- data/generated/google/apis/drive_v2/representations.rb +1 -0
- data/generated/google/apis/drive_v3.rb +1 -1
- data/generated/google/apis/drive_v3/classes.rb +7 -0
- data/generated/google/apis/drive_v3/representations.rb +1 -0
- data/generated/google/apis/fusiontables_v2.rb +1 -1
- data/generated/google/apis/games_configuration_v1configuration.rb +1 -1
- data/generated/google/apis/games_management_v1management.rb +1 -1
- data/generated/google/apis/games_v1.rb +1 -1
- data/generated/google/apis/genomics_v1.rb +2 -2
- data/generated/google/apis/genomics_v1/classes.rb +770 -82
- data/generated/google/apis/genomics_v1/representations.rb +287 -24
- data/generated/google/apis/genomics_v1/service.rb +412 -13
- data/generated/google/apis/gmail_v1.rb +1 -1
- data/generated/google/apis/groupssettings_v1.rb +1 -1
- data/generated/google/apis/groupssettings_v1/classes.rb +13 -6
- data/generated/google/apis/groupssettings_v1/representations.rb +1 -0
- data/generated/google/apis/identitytoolkit_v3.rb +1 -1
- data/generated/google/apis/identitytoolkit_v3/classes.rb +50 -0
- data/generated/google/apis/identitytoolkit_v3/representations.rb +10 -0
- data/generated/google/apis/logging_v2beta1.rb +2 -3
- data/generated/google/apis/logging_v2beta1/classes.rb +219 -63
- data/generated/google/apis/logging_v2beta1/representations.rb +24 -1
- data/generated/google/apis/logging_v2beta1/service.rb +25 -32
- data/generated/google/apis/oauth2_v2.rb +2 -2
- data/generated/google/apis/oauth2_v2/service.rb +1 -1
- data/generated/google/apis/plus_domains_v1.rb +1 -1
- data/generated/google/apis/plus_v1.rb +1 -1
- data/generated/google/apis/pubsub_v1.rb +1 -1
- data/generated/google/apis/pubsub_v1/classes.rb +20 -12
- data/generated/google/apis/pubsub_v1/service.rb +32 -35
- data/generated/google/apis/reseller_v1.rb +1 -1
- data/generated/google/apis/reseller_v1/classes.rb +23 -9
- data/generated/google/apis/reseller_v1/representations.rb +2 -0
- data/generated/google/apis/sheets_v1.rb +43 -0
- data/generated/google/apis/sheets_v1/classes.rb +4542 -0
- data/generated/google/apis/sheets_v1/representations.rb +1703 -0
- data/generated/google/apis/sheets_v1/service.rb +363 -0
- data/generated/google/apis/sqladmin_v1beta4.rb +3 -2
- data/generated/google/apis/sqladmin_v1beta4/classes.rb +4 -3
- data/generated/google/apis/sqladmin_v1beta4/service.rb +2 -1
- data/generated/google/apis/storage_v1.rb +1 -1
- data/generated/google/apis/vision_v1.rb +2 -2
- data/generated/google/apis/vision_v1/classes.rb +11 -11
- data/generated/google/apis/vision_v1/service.rb +1 -1
- data/generated/google/apis/webmasters_v3.rb +2 -2
- data/generated/google/apis/webmasters_v3/classes.rb +7 -0
- data/generated/google/apis/webmasters_v3/representations.rb +1 -0
- data/generated/google/apis/webmasters_v3/service.rb +1 -1
- data/generated/google/apis/youtube_partner_v1.rb +37 -0
- data/generated/google/apis/youtube_partner_v1/classes.rb +3656 -0
- data/generated/google/apis/youtube_partner_v1/representations.rb +1452 -0
- data/generated/google/apis/youtube_partner_v1/service.rb +3165 -0
- data/generated/google/apis/youtube_v3.rb +3 -2
- data/generated/google/apis/youtube_v3/classes.rb +100 -3
- data/generated/google/apis/youtube_v3/representations.rb +50 -0
- data/generated/google/apis/youtube_v3/service.rb +2 -1
- data/generated/google/apis/youtubereporting_v1.rb +1 -1
- data/generated/google/apis/youtubereporting_v1/classes.rb +17 -0
- data/generated/google/apis/youtubereporting_v1/representations.rb +2 -0
- data/generated/google/apis/youtubereporting_v1/service.rb +21 -3
- data/google-api-client.gemspec +2 -0
- data/lib/google/apis.rb +12 -2
- data/lib/google/apis/version.rb +1 -1
- data/script/generate +5 -2
- data/spec/google/apis/logging_spec.rb +55 -0
- metadata +12 -4
@@ -22,7 +22,7 @@ module Google
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module DfareportingV2_3
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# DCM/DFA Reporting And Trafficking API
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#
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# Manages your DoubleClick Campaign Manager ad campaigns and reports.
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#
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# @example
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# require 'google/apis/dfareporting_v2_3'
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# Select only placements that are associated with these compatibilities. WEB and
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# WEB_INTERSTITIAL refer to rendering either on desktop or on mobile devices for
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# regular or interstitial ads respectively. APP and APP_INTERSTITIAL are for
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# rendering in mobile apps.IN_STREAM_VIDEO refers to rendering in in-stream
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# rendering in mobile apps. IN_STREAM_VIDEO refers to rendering in in-stream
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# video ads developed with the VAST standard.
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# @param [Array<String>, String] content_category_ids
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# Select only placements that are associated with these content categories.
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# @see https://developers.google.com/cloud-dns
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module DnsV1
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VERSION = 'V1'
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REVISION = '
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REVISION = '20160224'
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# View and manage your data across Google Cloud Platform services
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AUTH_CLOUD_PLATFORM = 'https://www.googleapis.com/auth/cloud-platform'
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# @see https://developers.google.com/doubleclick-search/
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module DoubleclicksearchV2
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VERSION = 'V2'
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REVISION = '
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REVISION = '20160407'
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# View and manage your advertising data in DoubleClick Search
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AUTH_DOUBLECLICKSEARCH = 'https://www.googleapis.com/auth/doubleclicksearch'
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# @return [String]
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attr_accessor :agency_id
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# Available to advertisers only after contacting DoubleClick Search customer
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# support.
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# Corresponds to the JSON property `attributionModel`
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# @return [String]
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attr_accessor :attribution_model
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# @return [String]
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attr_accessor :conversion_timestamp
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# Available to advertisers only after contacting DoubleClick Search customer
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# support.
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# Corresponds to the JSON property `countMillis`
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# @return [String]
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attr_accessor :count_millis
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attr_accessor :quantity_millis
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# The revenue amount of this TRANSACTION conversion, in micros (value multiplied
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# by 1000000, no decimal). For example, to specify a revenue value of "10" enter
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# "10000000" (10 million) in your request.
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attr_accessor :revenue_micros
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# @return [Google::Apis::DriveV2::File::IndexableText]
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attr_accessor :indexable_text
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# Whether the file was created or opened by the requesting app.
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# Corresponds to the JSON property `isAppAuthorized`
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attr_accessor :is_app_authorized
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alias_method :is_app_authorized?, :is_app_authorized
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# The type of file. This is always drive#file.
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# @return [Hash<String,String>]
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# content stored in Drive; it is not populated for Google Docs or shortcut files.
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# The original filename of the uploaded content if available, or else the
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# original value of the title field. This is only available for files with
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# binary content in Drive.
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@id = args[:id] if args.key?(:id)
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@image_media_metadata = args[:image_media_metadata] if args.key?(:image_media_metadata)
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@indexable_text = args[:indexable_text] if args.key?(:indexable_text)
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@is_app_authorized = args[:is_app_authorized] if args.key?(:is_app_authorized)
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@kind = args[:kind] if args.key?(:kind)
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@labels = args[:labels] if args.key?(:labels)
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@last_modifying_user = args[:last_modifying_user] if args.key?(:last_modifying_user)
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property :indexable_text, as: 'indexableText', class: Google::Apis::DriveV2::File::IndexableText, decorator: Google::Apis::DriveV2::File::IndexableText::Representation
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property :is_app_authorized, as: 'isAppAuthorized'
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property :kind, as: 'kind'
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property :labels, as: 'labels', class: Google::Apis::DriveV2::File::Labels, decorator: Google::Apis::DriveV2::File::Labels::Representation
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# @return [Google::Apis::DriveV3::File::ImageMediaMetadata]
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attr_accessor :image_media_metadata
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# Whether the file was created or opened by the requesting app.
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# Corresponds to the JSON property `isAppAuthorized`
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# @return [Boolean]
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attr_accessor :is_app_authorized
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alias_method :is_app_authorized?, :is_app_authorized
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# This is always drive#file.
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# Corresponds to the JSON property `kind`
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@icon_link = args[:icon_link] if args.key?(:icon_link)
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@id = args[:id] if args.key?(:id)
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@is_app_authorized = args[:is_app_authorized] if args.key?(:is_app_authorized)
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@kind = args[:kind] if args.key?(:kind)
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@last_modifying_user = args[:last_modifying_user] if args.key?(:last_modifying_user)
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@md5_checksum = args[:md5_checksum] if args.key?(:md5_checksum)
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property :id, as: 'id'
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property :image_media_metadata, as: 'imageMediaMetadata', class: Google::Apis::DriveV3::File::ImageMediaMetadata, decorator: Google::Apis::DriveV3::File::ImageMediaMetadata::Representation
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property :is_app_authorized, as: 'isAppAuthorized'
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property :kind, as: 'kind'
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property :last_modifying_user, as: 'lastModifyingUser', class: Google::Apis::DriveV3::User, decorator: Google::Apis::DriveV3::User::Representation
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# @see https://developers.google.com/fusiontables
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module FusiontablesV2
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VERSION = 'V2'
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REVISION = '
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REVISION = '20160317'
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# Manage your Fusion Tables
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AUTH_FUSIONTABLES = 'https://www.googleapis.com/auth/fusiontables'
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# @see https://developers.google.com/games/services
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module GamesConfigurationV1configuration
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VERSION = 'V1configuration'
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REVISION = '
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REVISION = '20160407'
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# View and manage your Google Play Developer account
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AUTH_ANDROIDPUBLISHER = 'https://www.googleapis.com/auth/androidpublisher'
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# @see https://developers.google.com/games/services
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module GamesManagementV1management
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VERSION = 'V1management'
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REVISION = '20160407'
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# Share your Google+ profile information and view and manage your game activity
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AUTH_GAMES = 'https://www.googleapis.com/auth/games'
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# @see https://developers.google.com/games/services/
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module GamesV1
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VERSION = 'V1'
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REVISION = '
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REVISION = '20160407'
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# View and manage its own configuration data in your Google Drive
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AUTH_DRIVE_APPDATA = 'https://www.googleapis.com/auth/drive.appdata'
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# Global Alliance for Genomics and Health (GA4GH) v0.5.1 API as well as several
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# extensions.
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#
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# @see
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# @see https://cloud.google.com/genomics/
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module GenomicsV1
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VERSION = 'V1'
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REVISION = '
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REVISION = '20160411'
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# View and manage your data in Google BigQuery
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AUTH_BIGQUERY = 'https://www.googleapis.com/auth/bigquery'
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module Apis
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module GenomicsV1
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# An annotation set is a logical grouping of annotations that share consistent
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# type information and provenance. Examples of annotation sets include 'all
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# genes from refseq', and 'all variant annotations from ClinVar'.
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class AnnotationSet
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include Google::Apis::Core::Hashable
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# The server-generated annotation set ID, unique across all annotation sets.
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# Corresponds to the JSON property `id`
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# @return [String]
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attr_accessor :id
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# The dataset to which this annotation set belongs.
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# Corresponds to the JSON property `datasetId`
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# @return [String]
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attr_accessor :dataset_id
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# The ID of the reference set that defines the coordinate space for this set's
|
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+
# annotations.
|
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+
# Corresponds to the JSON property `referenceSetId`
|
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+
# @return [String]
|
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|
+
attr_accessor :reference_set_id
|
46
|
+
|
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|
+
# The display name for this annotation set.
|
48
|
+
# Corresponds to the JSON property `name`
|
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|
+
# @return [String]
|
50
|
+
attr_accessor :name
|
51
|
+
|
52
|
+
# The source URI describing the file from which this annotation set was
|
53
|
+
# generated, if any.
|
54
|
+
# Corresponds to the JSON property `sourceUri`
|
55
|
+
# @return [String]
|
56
|
+
attr_accessor :source_uri
|
57
|
+
|
58
|
+
# The type of annotations contained within this set.
|
59
|
+
# Corresponds to the JSON property `type`
|
60
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+
# @return [String]
|
61
|
+
attr_accessor :type
|
62
|
+
|
63
|
+
# A map of additional read alignment information. This must be of the form map (
|
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+
# string key mapping to a list of string values).
|
65
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+
# Corresponds to the JSON property `info`
|
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+
# @return [Hash<String,Array<Object>>]
|
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+
attr_accessor :info
|
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+
|
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|
+
def initialize(**args)
|
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+
update!(**args)
|
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+
end
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+
|
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+
# Update properties of this object
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+
def update!(**args)
|
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@id = args[:id] if args.key?(:id)
|
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+
@dataset_id = args[:dataset_id] if args.key?(:dataset_id)
|
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+
@reference_set_id = args[:reference_set_id] if args.key?(:reference_set_id)
|
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|
+
@name = args[:name] if args.key?(:name)
|
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+
@source_uri = args[:source_uri] if args.key?(:source_uri)
|
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+
@type = args[:type] if args.key?(:type)
|
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+
@info = args[:info] if args.key?(:info)
|
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|
+
end
|
83
|
+
end
|
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+
|
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+
# A generic empty message that you can re-use to avoid defining duplicated empty
|
86
|
+
# messages in your APIs. A typical example is to use it as the request or the
|
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|
+
# response type of an API method. For instance: service Foo ` rpc Bar(google.
|
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|
+
# protobuf.Empty) returns (google.protobuf.Empty); ` The JSON representation for
|
89
|
+
# `Empty` is empty JSON object ````.
|
90
|
+
class Empty
|
91
|
+
include Google::Apis::Core::Hashable
|
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+
|
93
|
+
def initialize(**args)
|
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+
update!(**args)
|
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|
+
end
|
96
|
+
|
97
|
+
# Update properties of this object
|
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|
+
def update!(**args)
|
99
|
+
end
|
100
|
+
end
|
101
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+
|
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|
+
#
|
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|
+
class SearchAnnotationSetsRequest
|
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|
+
include Google::Apis::Core::Hashable
|
105
|
+
|
106
|
+
# Required. The dataset IDs to search within. Caller must have `READ` access to
|
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|
+
# these datasets.
|
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|
+
# Corresponds to the JSON property `datasetIds`
|
109
|
+
# @return [Array<String>]
|
110
|
+
attr_accessor :dataset_ids
|
111
|
+
|
112
|
+
# If specified, only annotation sets associated with the given reference set are
|
113
|
+
# returned.
|
114
|
+
# Corresponds to the JSON property `referenceSetId`
|
115
|
+
# @return [String]
|
116
|
+
attr_accessor :reference_set_id
|
117
|
+
|
118
|
+
# Only return annotations sets for which a substring of the name matches this
|
119
|
+
# string (case insensitive).
|
120
|
+
# Corresponds to the JSON property `name`
|
121
|
+
# @return [String]
|
122
|
+
attr_accessor :name
|
123
|
+
|
124
|
+
# If specified, only annotation sets that have any of these types are returned.
|
125
|
+
# Corresponds to the JSON property `types`
|
126
|
+
# @return [Array<String>]
|
127
|
+
attr_accessor :types
|
128
|
+
|
129
|
+
# The continuation token, which is used to page through large result sets. To
|
130
|
+
# get the next page of results, set this parameter to the value of `
|
131
|
+
# nextPageToken` from the previous response.
|
132
|
+
# Corresponds to the JSON property `pageToken`
|
133
|
+
# @return [String]
|
134
|
+
attr_accessor :page_token
|
135
|
+
|
136
|
+
# The maximum number of results to return in a single page. If unspecified,
|
137
|
+
# defaults to 128. The maximum value is 1024.
|
138
|
+
# Corresponds to the JSON property `pageSize`
|
139
|
+
# @return [Fixnum]
|
140
|
+
attr_accessor :page_size
|
141
|
+
|
142
|
+
def initialize(**args)
|
143
|
+
update!(**args)
|
144
|
+
end
|
145
|
+
|
146
|
+
# Update properties of this object
|
147
|
+
def update!(**args)
|
148
|
+
@dataset_ids = args[:dataset_ids] if args.key?(:dataset_ids)
|
149
|
+
@reference_set_id = args[:reference_set_id] if args.key?(:reference_set_id)
|
150
|
+
@name = args[:name] if args.key?(:name)
|
151
|
+
@types = args[:types] if args.key?(:types)
|
152
|
+
@page_token = args[:page_token] if args.key?(:page_token)
|
153
|
+
@page_size = args[:page_size] if args.key?(:page_size)
|
154
|
+
end
|
155
|
+
end
|
156
|
+
|
157
|
+
#
|
158
|
+
class SearchAnnotationSetsResponse
|
159
|
+
include Google::Apis::Core::Hashable
|
160
|
+
|
161
|
+
# The matching annotation sets.
|
162
|
+
# Corresponds to the JSON property `annotationSets`
|
163
|
+
# @return [Array<Google::Apis::GenomicsV1::AnnotationSet>]
|
164
|
+
attr_accessor :annotation_sets
|
165
|
+
|
166
|
+
# The continuation token, which is used to page through large result sets.
|
167
|
+
# Provide this value in a subsequent request to return the next page of results.
|
168
|
+
# This field will be empty if there aren't any additional results.
|
169
|
+
# Corresponds to the JSON property `nextPageToken`
|
170
|
+
# @return [String]
|
171
|
+
attr_accessor :next_page_token
|
172
|
+
|
173
|
+
def initialize(**args)
|
174
|
+
update!(**args)
|
175
|
+
end
|
176
|
+
|
177
|
+
# Update properties of this object
|
178
|
+
def update!(**args)
|
179
|
+
@annotation_sets = args[:annotation_sets] if args.key?(:annotation_sets)
|
180
|
+
@next_page_token = args[:next_page_token] if args.key?(:next_page_token)
|
181
|
+
end
|
182
|
+
end
|
183
|
+
|
184
|
+
# An annotation describes a region of reference genome. The value of an
|
185
|
+
# annotation may be one of several canonical types, supplemented by arbitrary
|
186
|
+
# info tags. An annotation is not inherently associated with a specific sample
|
187
|
+
# or individual (though a client could choose to use annotations in this way).
|
188
|
+
# Example canonical annotation types are `GENE` and `VARIANT`.
|
189
|
+
class Annotation
|
190
|
+
include Google::Apis::Core::Hashable
|
191
|
+
|
192
|
+
# The server-generated annotation ID, unique across all annotations.
|
193
|
+
# Corresponds to the JSON property `id`
|
194
|
+
# @return [String]
|
195
|
+
attr_accessor :id
|
196
|
+
|
197
|
+
# The annotation set to which this annotation belongs.
|
198
|
+
# Corresponds to the JSON property `annotationSetId`
|
199
|
+
# @return [String]
|
200
|
+
attr_accessor :annotation_set_id
|
201
|
+
|
202
|
+
# The display name of this annotation.
|
203
|
+
# Corresponds to the JSON property `name`
|
204
|
+
# @return [String]
|
205
|
+
attr_accessor :name
|
206
|
+
|
207
|
+
# The ID of the Google Genomics reference associated with this range.
|
208
|
+
# Corresponds to the JSON property `referenceId`
|
209
|
+
# @return [String]
|
210
|
+
attr_accessor :reference_id
|
211
|
+
|
212
|
+
# The display name corresponding to the reference specified by `referenceId`,
|
213
|
+
# for example `chr1`, `1`, or `chrX`.
|
214
|
+
# Corresponds to the JSON property `referenceName`
|
215
|
+
# @return [String]
|
216
|
+
attr_accessor :reference_name
|
217
|
+
|
218
|
+
# The start position of the range on the reference, 0-based inclusive.
|
219
|
+
# Corresponds to the JSON property `start`
|
220
|
+
# @return [String]
|
221
|
+
attr_accessor :start
|
222
|
+
|
223
|
+
# The end position of the range on the reference, 0-based exclusive.
|
224
|
+
# Corresponds to the JSON property `end`
|
225
|
+
# @return [String]
|
226
|
+
attr_accessor :end
|
227
|
+
|
228
|
+
# Whether this range refers to the reverse strand, as opposed to the forward
|
229
|
+
# strand. Note that regardless of this field, the start/end position of the
|
230
|
+
# range always refer to the forward strand.
|
231
|
+
# Corresponds to the JSON property `reverseStrand`
|
232
|
+
# @return [Boolean]
|
233
|
+
attr_accessor :reverse_strand
|
234
|
+
alias_method :reverse_strand?, :reverse_strand
|
235
|
+
|
236
|
+
# The data type for this annotation. Must match the containing annotation set's
|
237
|
+
# type.
|
238
|
+
# Corresponds to the JSON property `type`
|
239
|
+
# @return [String]
|
240
|
+
attr_accessor :type
|
241
|
+
|
242
|
+
# A variant annotation, which describes the effect of a variant on the genome,
|
243
|
+
# the coding sequence, and/or higher level consequences at the organism level e.
|
244
|
+
# g. pathogenicity. This field is only set for annotations of type `VARIANT`.
|
245
|
+
# Corresponds to the JSON property `variant`
|
246
|
+
# @return [Google::Apis::GenomicsV1::VariantAnnotation]
|
247
|
+
attr_accessor :variant
|
248
|
+
|
249
|
+
# A transcript represents the assertion that a particular region of the
|
250
|
+
# reference genome may be transcribed as RNA.
|
251
|
+
# Corresponds to the JSON property `transcript`
|
252
|
+
# @return [Google::Apis::GenomicsV1::Transcript]
|
253
|
+
attr_accessor :transcript
|
254
|
+
|
255
|
+
# A map of additional read alignment information. This must be of the form map (
|
256
|
+
# string key mapping to a list of string values).
|
257
|
+
# Corresponds to the JSON property `info`
|
258
|
+
# @return [Hash<String,Array<Object>>]
|
259
|
+
attr_accessor :info
|
260
|
+
|
261
|
+
def initialize(**args)
|
262
|
+
update!(**args)
|
263
|
+
end
|
264
|
+
|
265
|
+
# Update properties of this object
|
266
|
+
def update!(**args)
|
267
|
+
@id = args[:id] if args.key?(:id)
|
268
|
+
@annotation_set_id = args[:annotation_set_id] if args.key?(:annotation_set_id)
|
269
|
+
@name = args[:name] if args.key?(:name)
|
270
|
+
@reference_id = args[:reference_id] if args.key?(:reference_id)
|
271
|
+
@reference_name = args[:reference_name] if args.key?(:reference_name)
|
272
|
+
@start = args[:start] if args.key?(:start)
|
273
|
+
@end = args[:end] if args.key?(:end)
|
274
|
+
@reverse_strand = args[:reverse_strand] if args.key?(:reverse_strand)
|
275
|
+
@type = args[:type] if args.key?(:type)
|
276
|
+
@variant = args[:variant] if args.key?(:variant)
|
277
|
+
@transcript = args[:transcript] if args.key?(:transcript)
|
278
|
+
@info = args[:info] if args.key?(:info)
|
279
|
+
end
|
280
|
+
end
|
281
|
+
|
282
|
+
#
|
283
|
+
class VariantAnnotation
|
284
|
+
include Google::Apis::Core::Hashable
|
285
|
+
|
286
|
+
# Type has been adapted from ClinVar's list of variant types.
|
287
|
+
# Corresponds to the JSON property `type`
|
288
|
+
# @return [String]
|
289
|
+
attr_accessor :type
|
290
|
+
|
291
|
+
# Effect of the variant on the coding sequence.
|
292
|
+
# Corresponds to the JSON property `effect`
|
293
|
+
# @return [String]
|
294
|
+
attr_accessor :effect
|
295
|
+
|
296
|
+
# The alternate allele for this variant. If multiple alternate alleles exist at
|
297
|
+
# this location, create a separate variant for each one, as they may represent
|
298
|
+
# distinct conditions.
|
299
|
+
# Corresponds to the JSON property `alternateBases`
|
300
|
+
# @return [String]
|
301
|
+
attr_accessor :alternate_bases
|
302
|
+
|
303
|
+
# Google annotation ID of the gene affected by this variant. This should be
|
304
|
+
# provided when the variant is created.
|
305
|
+
# Corresponds to the JSON property `geneId`
|
306
|
+
# @return [String]
|
307
|
+
attr_accessor :gene_id
|
308
|
+
|
309
|
+
# Google annotation IDs of the transcripts affected by this variant. These
|
310
|
+
# should be provided when the variant is created.
|
311
|
+
# Corresponds to the JSON property `transcriptIds`
|
312
|
+
# @return [Array<String>]
|
313
|
+
attr_accessor :transcript_ids
|
314
|
+
|
315
|
+
# The set of conditions associated with this variant. A condition describes the
|
316
|
+
# way a variant influences human health.
|
317
|
+
# Corresponds to the JSON property `conditions`
|
318
|
+
# @return [Array<Google::Apis::GenomicsV1::ClinicalCondition>]
|
319
|
+
attr_accessor :conditions
|
320
|
+
|
321
|
+
# Describes the clinical significance of a variant. It is adapted from the
|
322
|
+
# ClinVar controlled vocabulary for clinical significance described at: http://
|
323
|
+
# www.ncbi.nlm.nih.gov/clinvar/docs/clinsig/
|
324
|
+
# Corresponds to the JSON property `clinicalSignificance`
|
325
|
+
# @return [String]
|
326
|
+
attr_accessor :clinical_significance
|
327
|
+
|
328
|
+
def initialize(**args)
|
329
|
+
update!(**args)
|
330
|
+
end
|
331
|
+
|
332
|
+
# Update properties of this object
|
333
|
+
def update!(**args)
|
334
|
+
@type = args[:type] if args.key?(:type)
|
335
|
+
@effect = args[:effect] if args.key?(:effect)
|
336
|
+
@alternate_bases = args[:alternate_bases] if args.key?(:alternate_bases)
|
337
|
+
@gene_id = args[:gene_id] if args.key?(:gene_id)
|
338
|
+
@transcript_ids = args[:transcript_ids] if args.key?(:transcript_ids)
|
339
|
+
@conditions = args[:conditions] if args.key?(:conditions)
|
340
|
+
@clinical_significance = args[:clinical_significance] if args.key?(:clinical_significance)
|
341
|
+
end
|
342
|
+
end
|
343
|
+
|
344
|
+
#
|
345
|
+
class ClinicalCondition
|
346
|
+
include Google::Apis::Core::Hashable
|
347
|
+
|
348
|
+
# A set of names for the condition.
|
349
|
+
# Corresponds to the JSON property `names`
|
350
|
+
# @return [Array<String>]
|
351
|
+
attr_accessor :names
|
352
|
+
|
353
|
+
# The set of external IDs for this condition.
|
354
|
+
# Corresponds to the JSON property `externalIds`
|
355
|
+
# @return [Array<Google::Apis::GenomicsV1::ExternalId>]
|
356
|
+
attr_accessor :external_ids
|
357
|
+
|
358
|
+
# The MedGen concept id associated with this gene. Search for these IDs at http:/
|
359
|
+
# /www.ncbi.nlm.nih.gov/medgen/
|
360
|
+
# Corresponds to the JSON property `conceptId`
|
361
|
+
# @return [String]
|
362
|
+
attr_accessor :concept_id
|
363
|
+
|
364
|
+
# The OMIM id for this condition. Search for these IDs at http://omim.org/
|
365
|
+
# Corresponds to the JSON property `omimId`
|
366
|
+
# @return [String]
|
367
|
+
attr_accessor :omim_id
|
368
|
+
|
369
|
+
def initialize(**args)
|
370
|
+
update!(**args)
|
371
|
+
end
|
372
|
+
|
373
|
+
# Update properties of this object
|
374
|
+
def update!(**args)
|
375
|
+
@names = args[:names] if args.key?(:names)
|
376
|
+
@external_ids = args[:external_ids] if args.key?(:external_ids)
|
377
|
+
@concept_id = args[:concept_id] if args.key?(:concept_id)
|
378
|
+
@omim_id = args[:omim_id] if args.key?(:omim_id)
|
379
|
+
end
|
380
|
+
end
|
381
|
+
|
382
|
+
#
|
383
|
+
class ExternalId
|
384
|
+
include Google::Apis::Core::Hashable
|
385
|
+
|
386
|
+
# The name of the source of this data.
|
387
|
+
# Corresponds to the JSON property `sourceName`
|
388
|
+
# @return [String]
|
389
|
+
attr_accessor :source_name
|
390
|
+
|
391
|
+
# The id used by the source of this data.
|
392
|
+
# Corresponds to the JSON property `id`
|
393
|
+
# @return [String]
|
394
|
+
attr_accessor :id
|
395
|
+
|
396
|
+
def initialize(**args)
|
397
|
+
update!(**args)
|
398
|
+
end
|
399
|
+
|
400
|
+
# Update properties of this object
|
401
|
+
def update!(**args)
|
402
|
+
@source_name = args[:source_name] if args.key?(:source_name)
|
403
|
+
@id = args[:id] if args.key?(:id)
|
404
|
+
end
|
405
|
+
end
|
406
|
+
|
407
|
+
# A transcript represents the assertion that a particular region of the
|
408
|
+
# reference genome may be transcribed as RNA.
|
409
|
+
class Transcript
|
410
|
+
include Google::Apis::Core::Hashable
|
411
|
+
|
412
|
+
# The annotation ID of the gene from which this transcript is transcribed.
|
413
|
+
# Corresponds to the JSON property `geneId`
|
414
|
+
# @return [String]
|
415
|
+
attr_accessor :gene_id
|
416
|
+
|
417
|
+
# The exons that compose this transcript. This field should be unset for genomes
|
418
|
+
# where transcript splicing does not occur, for example prokaryotes. Introns are
|
419
|
+
# regions of the transcript that are not included in the spliced RNA product.
|
420
|
+
# Though not explicitly modeled here, intron ranges can be deduced; all regions
|
421
|
+
# of this transcript that are not exons are introns. Exonic sequences do not
|
422
|
+
# necessarily code for a translational product (amino acids). Only the regions
|
423
|
+
# of exons bounded by the codingSequence correspond to coding DNA sequence.
|
424
|
+
# Exons are ordered by start position and may not overlap.
|
425
|
+
# Corresponds to the JSON property `exons`
|
426
|
+
# @return [Array<Google::Apis::GenomicsV1::Exon>]
|
427
|
+
attr_accessor :exons
|
428
|
+
|
429
|
+
# The range of the coding sequence for this transcript, if any. To determine the
|
430
|
+
# exact ranges of coding sequence, intersect this range with those of the exons,
|
431
|
+
# if any. If there are any exons, the codingSequence must start and end within
|
432
|
+
# them. Note that in some cases, the reference genome will not exactly match the
|
433
|
+
# observed mRNA transcript e.g. due to variance in the source genome from
|
434
|
+
# reference. In these cases, exon.frame will not necessarily match the expected
|
435
|
+
# reference reading frame and coding exon reference bases cannot necessarily be
|
436
|
+
# concatenated to produce the original transcript mRNA.
|
437
|
+
# Corresponds to the JSON property `codingSequence`
|
438
|
+
# @return [Google::Apis::GenomicsV1::CodingSequence]
|
439
|
+
attr_accessor :coding_sequence
|
440
|
+
|
441
|
+
def initialize(**args)
|
442
|
+
update!(**args)
|
443
|
+
end
|
444
|
+
|
445
|
+
# Update properties of this object
|
446
|
+
def update!(**args)
|
447
|
+
@gene_id = args[:gene_id] if args.key?(:gene_id)
|
448
|
+
@exons = args[:exons] if args.key?(:exons)
|
449
|
+
@coding_sequence = args[:coding_sequence] if args.key?(:coding_sequence)
|
450
|
+
end
|
451
|
+
end
|
452
|
+
|
453
|
+
#
|
454
|
+
class Exon
|
455
|
+
include Google::Apis::Core::Hashable
|
456
|
+
|
457
|
+
# The start position of the exon on this annotation's reference sequence, 0-
|
458
|
+
# based inclusive. Note that this is relative to the reference start, and **not**
|
459
|
+
# the containing annotation start.
|
460
|
+
# Corresponds to the JSON property `start`
|
461
|
+
# @return [String]
|
462
|
+
attr_accessor :start
|
463
|
+
|
464
|
+
# The end position of the exon on this annotation's reference sequence, 0-based
|
465
|
+
# exclusive. Note that this is relative to the reference start, and *not* the
|
466
|
+
# containing annotation start.
|
467
|
+
# Corresponds to the JSON property `end`
|
468
|
+
# @return [String]
|
469
|
+
attr_accessor :end
|
470
|
+
|
471
|
+
# The frame of this exon. Contains a value of 0, 1, or 2, which indicates the
|
472
|
+
# offset of the first coding base of the exon within the reading frame of the
|
473
|
+
# coding DNA sequence, if any. This field is dependent on the strandedness of
|
474
|
+
# this annotation (see Annotation.reverse_strand). For forward stranded
|
475
|
+
# annotations, this offset is relative to the exon.start. For reverse strand
|
476
|
+
# annotations, this offset is relative to the exon.end `- 1`. Unset if this exon
|
477
|
+
# does not intersect the coding sequence. Upon creation of a transcript, the
|
478
|
+
# frame must be populated for all or none of the coding exons.
|
479
|
+
# Corresponds to the JSON property `frame`
|
480
|
+
# @return [Fixnum]
|
481
|
+
attr_accessor :frame
|
482
|
+
|
483
|
+
def initialize(**args)
|
484
|
+
update!(**args)
|
485
|
+
end
|
486
|
+
|
487
|
+
# Update properties of this object
|
488
|
+
def update!(**args)
|
489
|
+
@start = args[:start] if args.key?(:start)
|
490
|
+
@end = args[:end] if args.key?(:end)
|
491
|
+
@frame = args[:frame] if args.key?(:frame)
|
492
|
+
end
|
493
|
+
end
|
494
|
+
|
495
|
+
#
|
496
|
+
class CodingSequence
|
497
|
+
include Google::Apis::Core::Hashable
|
498
|
+
|
499
|
+
# The start of the coding sequence on this annotation's reference sequence, 0-
|
500
|
+
# based inclusive. Note that this position is relative to the reference start,
|
501
|
+
# and *not* the containing annotation start.
|
502
|
+
# Corresponds to the JSON property `start`
|
503
|
+
# @return [String]
|
504
|
+
attr_accessor :start
|
505
|
+
|
506
|
+
# The end of the coding sequence on this annotation's reference sequence, 0-
|
507
|
+
# based exclusive. Note that this position is relative to the reference start,
|
508
|
+
# and *not* the containing annotation start.
|
509
|
+
# Corresponds to the JSON property `end`
|
510
|
+
# @return [String]
|
511
|
+
attr_accessor :end
|
512
|
+
|
513
|
+
def initialize(**args)
|
514
|
+
update!(**args)
|
515
|
+
end
|
516
|
+
|
517
|
+
# Update properties of this object
|
518
|
+
def update!(**args)
|
519
|
+
@start = args[:start] if args.key?(:start)
|
520
|
+
@end = args[:end] if args.key?(:end)
|
521
|
+
end
|
522
|
+
end
|
523
|
+
|
524
|
+
#
|
525
|
+
class BatchCreateAnnotationsRequest
|
526
|
+
include Google::Apis::Core::Hashable
|
527
|
+
|
528
|
+
# The annotations to be created. At most 4096 can be specified in a single
|
529
|
+
# request.
|
530
|
+
# Corresponds to the JSON property `annotations`
|
531
|
+
# @return [Array<Google::Apis::GenomicsV1::Annotation>]
|
532
|
+
attr_accessor :annotations
|
533
|
+
|
534
|
+
def initialize(**args)
|
535
|
+
update!(**args)
|
536
|
+
end
|
537
|
+
|
538
|
+
# Update properties of this object
|
539
|
+
def update!(**args)
|
540
|
+
@annotations = args[:annotations] if args.key?(:annotations)
|
541
|
+
end
|
542
|
+
end
|
543
|
+
|
544
|
+
#
|
545
|
+
class BatchCreateAnnotationsResponse
|
546
|
+
include Google::Apis::Core::Hashable
|
547
|
+
|
548
|
+
# The resulting per-annotation entries, ordered consistently with the original
|
549
|
+
# request.
|
550
|
+
# Corresponds to the JSON property `entries`
|
551
|
+
# @return [Array<Google::Apis::GenomicsV1::Entry>]
|
552
|
+
attr_accessor :entries
|
553
|
+
|
554
|
+
def initialize(**args)
|
555
|
+
update!(**args)
|
556
|
+
end
|
557
|
+
|
558
|
+
# Update properties of this object
|
559
|
+
def update!(**args)
|
560
|
+
@entries = args[:entries] if args.key?(:entries)
|
561
|
+
end
|
562
|
+
end
|
563
|
+
|
564
|
+
#
|
565
|
+
class Entry
|
566
|
+
include Google::Apis::Core::Hashable
|
567
|
+
|
568
|
+
# The `Status` type defines a logical error model that is suitable for different
|
569
|
+
# programming environments, including REST APIs and RPC APIs. It is used by [
|
570
|
+
# gRPC](https://github.com/grpc). The error model is designed to be: - Simple to
|
571
|
+
# use and understand for most users - Flexible enough to meet unexpected needs #
|
572
|
+
# Overview The `Status` message contains three pieces of data: error code, error
|
573
|
+
# message, and error details. The error code should be an enum value of google.
|
574
|
+
# rpc.Code, but it may accept additional error codes if needed. The error
|
575
|
+
# message should be a developer-facing English message that helps developers *
|
576
|
+
# understand* and *resolve* the error. If a localized user-facing error message
|
577
|
+
# is needed, put the localized message in the error details or localize it in
|
578
|
+
# the client. The optional error details may contain arbitrary information about
|
579
|
+
# the error. There is a predefined set of error detail types in the package `
|
580
|
+
# google.rpc` which can be used for common error conditions. # Language mapping
|
581
|
+
# The `Status` message is the logical representation of the error model, but it
|
582
|
+
# is not necessarily the actual wire format. When the `Status` message is
|
583
|
+
# exposed in different client libraries and different wire protocols, it can be
|
584
|
+
# mapped differently. For example, it will likely be mapped to some exceptions
|
585
|
+
# in Java, but more likely mapped to some error codes in C. # Other uses The
|
586
|
+
# error model and the `Status` message can be used in a variety of environments,
|
587
|
+
# either with or without APIs, to provide a consistent developer experience
|
588
|
+
# across different environments. Example uses of this error model include: -
|
589
|
+
# Partial errors. If a service needs to return partial errors to the client, it
|
590
|
+
# may embed the `Status` in the normal response to indicate the partial errors. -
|
591
|
+
# Workflow errors. A typical workflow has multiple steps. Each step may have a `
|
592
|
+
# Status` message for error reporting purpose. - Batch operations. If a client
|
593
|
+
# uses batch request and batch response, the `Status` message should be used
|
594
|
+
# directly inside batch response, one for each error sub-response. -
|
595
|
+
# Asynchronous operations. If an API call embeds asynchronous operation results
|
596
|
+
# in its response, the status of those operations should be represented directly
|
597
|
+
# using the `Status` message. - Logging. If some API errors are stored in logs,
|
598
|
+
# the message `Status` could be used directly after any stripping needed for
|
599
|
+
# security/privacy reasons.
|
600
|
+
# Corresponds to the JSON property `status`
|
601
|
+
# @return [Google::Apis::GenomicsV1::Status]
|
602
|
+
attr_accessor :status
|
603
|
+
|
604
|
+
# An annotation describes a region of reference genome. The value of an
|
605
|
+
# annotation may be one of several canonical types, supplemented by arbitrary
|
606
|
+
# info tags. An annotation is not inherently associated with a specific sample
|
607
|
+
# or individual (though a client could choose to use annotations in this way).
|
608
|
+
# Example canonical annotation types are `GENE` and `VARIANT`.
|
609
|
+
# Corresponds to the JSON property `annotation`
|
610
|
+
# @return [Google::Apis::GenomicsV1::Annotation]
|
611
|
+
attr_accessor :annotation
|
612
|
+
|
613
|
+
def initialize(**args)
|
614
|
+
update!(**args)
|
615
|
+
end
|
616
|
+
|
617
|
+
# Update properties of this object
|
618
|
+
def update!(**args)
|
619
|
+
@status = args[:status] if args.key?(:status)
|
620
|
+
@annotation = args[:annotation] if args.key?(:annotation)
|
621
|
+
end
|
622
|
+
end
|
623
|
+
|
624
|
+
# The `Status` type defines a logical error model that is suitable for different
|
625
|
+
# programming environments, including REST APIs and RPC APIs. It is used by [
|
626
|
+
# gRPC](https://github.com/grpc). The error model is designed to be: - Simple to
|
627
|
+
# use and understand for most users - Flexible enough to meet unexpected needs #
|
628
|
+
# Overview The `Status` message contains three pieces of data: error code, error
|
629
|
+
# message, and error details. The error code should be an enum value of google.
|
630
|
+
# rpc.Code, but it may accept additional error codes if needed. The error
|
631
|
+
# message should be a developer-facing English message that helps developers *
|
632
|
+
# understand* and *resolve* the error. If a localized user-facing error message
|
633
|
+
# is needed, put the localized message in the error details or localize it in
|
634
|
+
# the client. The optional error details may contain arbitrary information about
|
635
|
+
# the error. There is a predefined set of error detail types in the package `
|
636
|
+
# google.rpc` which can be used for common error conditions. # Language mapping
|
637
|
+
# The `Status` message is the logical representation of the error model, but it
|
638
|
+
# is not necessarily the actual wire format. When the `Status` message is
|
639
|
+
# exposed in different client libraries and different wire protocols, it can be
|
640
|
+
# mapped differently. For example, it will likely be mapped to some exceptions
|
641
|
+
# in Java, but more likely mapped to some error codes in C. # Other uses The
|
642
|
+
# error model and the `Status` message can be used in a variety of environments,
|
643
|
+
# either with or without APIs, to provide a consistent developer experience
|
644
|
+
# across different environments. Example uses of this error model include: -
|
645
|
+
# Partial errors. If a service needs to return partial errors to the client, it
|
646
|
+
# may embed the `Status` in the normal response to indicate the partial errors. -
|
647
|
+
# Workflow errors. A typical workflow has multiple steps. Each step may have a `
|
648
|
+
# Status` message for error reporting purpose. - Batch operations. If a client
|
649
|
+
# uses batch request and batch response, the `Status` message should be used
|
650
|
+
# directly inside batch response, one for each error sub-response. -
|
651
|
+
# Asynchronous operations. If an API call embeds asynchronous operation results
|
652
|
+
# in its response, the status of those operations should be represented directly
|
653
|
+
# using the `Status` message. - Logging. If some API errors are stored in logs,
|
654
|
+
# the message `Status` could be used directly after any stripping needed for
|
655
|
+
# security/privacy reasons.
|
656
|
+
class Status
|
657
|
+
include Google::Apis::Core::Hashable
|
658
|
+
|
659
|
+
# The status code, which should be an enum value of google.rpc.Code.
|
660
|
+
# Corresponds to the JSON property `code`
|
661
|
+
# @return [Fixnum]
|
662
|
+
attr_accessor :code
|
663
|
+
|
664
|
+
# A developer-facing error message, which should be in English. Any user-facing
|
665
|
+
# error message should be localized and sent in the google.rpc.Status.details
|
666
|
+
# field, or localized by the client.
|
667
|
+
# Corresponds to the JSON property `message`
|
668
|
+
# @return [String]
|
669
|
+
attr_accessor :message
|
670
|
+
|
671
|
+
# A list of messages that carry the error details. There will be a common set of
|
672
|
+
# message types for APIs to use.
|
673
|
+
# Corresponds to the JSON property `details`
|
674
|
+
# @return [Array<Hash<String,Object>>]
|
675
|
+
attr_accessor :details
|
676
|
+
|
677
|
+
def initialize(**args)
|
678
|
+
update!(**args)
|
679
|
+
end
|
680
|
+
|
681
|
+
# Update properties of this object
|
682
|
+
def update!(**args)
|
683
|
+
@code = args[:code] if args.key?(:code)
|
684
|
+
@message = args[:message] if args.key?(:message)
|
685
|
+
@details = args[:details] if args.key?(:details)
|
686
|
+
end
|
687
|
+
end
|
688
|
+
|
689
|
+
#
|
690
|
+
class SearchAnnotationsRequest
|
691
|
+
include Google::Apis::Core::Hashable
|
692
|
+
|
693
|
+
# Required. The annotation sets to search within. The caller must have `READ`
|
694
|
+
# access to these annotation sets. All queried annotation sets must have the
|
695
|
+
# same type.
|
696
|
+
# Corresponds to the JSON property `annotationSetIds`
|
697
|
+
# @return [Array<String>]
|
698
|
+
attr_accessor :annotation_set_ids
|
699
|
+
|
700
|
+
# The ID of the reference to query.
|
701
|
+
# Corresponds to the JSON property `referenceId`
|
702
|
+
# @return [String]
|
703
|
+
attr_accessor :reference_id
|
704
|
+
|
705
|
+
# The name of the reference to query, within the reference set associated with
|
706
|
+
# this query.
|
707
|
+
# Corresponds to the JSON property `referenceName`
|
708
|
+
# @return [String]
|
709
|
+
attr_accessor :reference_name
|
710
|
+
|
711
|
+
# The start position of the range on the reference, 0-based inclusive. If
|
712
|
+
# specified, referenceId or referenceName must be specified. Defaults to 0.
|
713
|
+
# Corresponds to the JSON property `start`
|
714
|
+
# @return [String]
|
715
|
+
attr_accessor :start
|
716
|
+
|
717
|
+
# The end position of the range on the reference, 0-based exclusive. If
|
718
|
+
# referenceId or referenceName must be specified, Defaults to the length of the
|
719
|
+
# reference.
|
720
|
+
# Corresponds to the JSON property `end`
|
721
|
+
# @return [String]
|
722
|
+
attr_accessor :end
|
723
|
+
|
724
|
+
# The continuation token, which is used to page through large result sets. To
|
725
|
+
# get the next page of results, set this parameter to the value of `
|
726
|
+
# nextPageToken` from the previous response.
|
727
|
+
# Corresponds to the JSON property `pageToken`
|
728
|
+
# @return [String]
|
729
|
+
attr_accessor :page_token
|
730
|
+
|
731
|
+
# The maximum number of results to return in a single page. If unspecified,
|
732
|
+
# defaults to 256. The maximum value is 2048.
|
733
|
+
# Corresponds to the JSON property `pageSize`
|
734
|
+
# @return [Fixnum]
|
735
|
+
attr_accessor :page_size
|
736
|
+
|
737
|
+
def initialize(**args)
|
738
|
+
update!(**args)
|
739
|
+
end
|
740
|
+
|
741
|
+
# Update properties of this object
|
742
|
+
def update!(**args)
|
743
|
+
@annotation_set_ids = args[:annotation_set_ids] if args.key?(:annotation_set_ids)
|
744
|
+
@reference_id = args[:reference_id] if args.key?(:reference_id)
|
745
|
+
@reference_name = args[:reference_name] if args.key?(:reference_name)
|
746
|
+
@start = args[:start] if args.key?(:start)
|
747
|
+
@end = args[:end] if args.key?(:end)
|
748
|
+
@page_token = args[:page_token] if args.key?(:page_token)
|
749
|
+
@page_size = args[:page_size] if args.key?(:page_size)
|
750
|
+
end
|
751
|
+
end
|
752
|
+
|
753
|
+
#
|
754
|
+
class SearchAnnotationsResponse
|
755
|
+
include Google::Apis::Core::Hashable
|
756
|
+
|
757
|
+
# The matching annotations.
|
758
|
+
# Corresponds to the JSON property `annotations`
|
759
|
+
# @return [Array<Google::Apis::GenomicsV1::Annotation>]
|
760
|
+
attr_accessor :annotations
|
761
|
+
|
762
|
+
# The continuation token, which is used to page through large result sets.
|
763
|
+
# Provide this value in a subsequent request to return the next page of results.
|
764
|
+
# This field will be empty if there aren't any additional results.
|
765
|
+
# Corresponds to the JSON property `nextPageToken`
|
766
|
+
# @return [String]
|
767
|
+
attr_accessor :next_page_token
|
768
|
+
|
769
|
+
def initialize(**args)
|
770
|
+
update!(**args)
|
771
|
+
end
|
772
|
+
|
773
|
+
# Update properties of this object
|
774
|
+
def update!(**args)
|
775
|
+
@annotations = args[:annotations] if args.key?(:annotations)
|
776
|
+
@next_page_token = args[:next_page_token] if args.key?(:next_page_token)
|
777
|
+
end
|
778
|
+
end
|
779
|
+
|
25
780
|
# The dataset list response.
|
26
781
|
class ListDatasetsResponse
|
27
782
|
include Google::Apis::Core::Hashable
|
@@ -88,23 +843,6 @@ module Google
|
|
88
843
|
end
|
89
844
|
end
|
90
845
|
|
91
|
-
# A generic empty message that you can re-use to avoid defining duplicated empty
|
92
|
-
# messages in your APIs. A typical example is to use it as the request or the
|
93
|
-
# response type of an API method. For instance: service Foo ` rpc Bar(google.
|
94
|
-
# protobuf.Empty) returns (google.protobuf.Empty); ` The JSON representation for
|
95
|
-
# `Empty` is empty JSON object ````.
|
96
|
-
class Empty
|
97
|
-
include Google::Apis::Core::Hashable
|
98
|
-
|
99
|
-
def initialize(**args)
|
100
|
-
update!(**args)
|
101
|
-
end
|
102
|
-
|
103
|
-
# Update properties of this object
|
104
|
-
def update!(**args)
|
105
|
-
end
|
106
|
-
end
|
107
|
-
|
108
846
|
#
|
109
847
|
class UndeleteDatasetRequest
|
110
848
|
include Google::Apis::Core::Hashable
|
@@ -368,71 +1106,6 @@ module Google
|
|
368
1106
|
end
|
369
1107
|
end
|
370
1108
|
|
371
|
-
# The `Status` type defines a logical error model that is suitable for different
|
372
|
-
# programming environments, including REST APIs and RPC APIs. It is used by [
|
373
|
-
# gRPC](https://github.com/grpc). The error model is designed to be: - Simple to
|
374
|
-
# use and understand for most users - Flexible enough to meet unexpected needs #
|
375
|
-
# Overview The `Status` message contains three pieces of data: error code, error
|
376
|
-
# message, and error details. The error code should be an enum value of google.
|
377
|
-
# rpc.Code, but it may accept additional error codes if needed. The error
|
378
|
-
# message should be a developer-facing English message that helps developers *
|
379
|
-
# understand* and *resolve* the error. If a localized user-facing error message
|
380
|
-
# is needed, put the localized message in the error details or localize it in
|
381
|
-
# the client. The optional error details may contain arbitrary information about
|
382
|
-
# the error. There is a predefined set of error detail types in the package `
|
383
|
-
# google.rpc` which can be used for common error conditions. # Language mapping
|
384
|
-
# The `Status` message is the logical representation of the error model, but it
|
385
|
-
# is not necessarily the actual wire format. When the `Status` message is
|
386
|
-
# exposed in different client libraries and different wire protocols, it can be
|
387
|
-
# mapped differently. For example, it will likely be mapped to some exceptions
|
388
|
-
# in Java, but more likely mapped to some error codes in C. # Other uses The
|
389
|
-
# error model and the `Status` message can be used in a variety of environments,
|
390
|
-
# either with or without APIs, to provide a consistent developer experience
|
391
|
-
# across different environments. Example uses of this error model include: -
|
392
|
-
# Partial errors. If a service needs to return partial errors to the client, it
|
393
|
-
# may embed the `Status` in the normal response to indicate the partial errors. -
|
394
|
-
# Workflow errors. A typical workflow has multiple steps. Each step may have a `
|
395
|
-
# Status` message for error reporting purpose. - Batch operations. If a client
|
396
|
-
# uses batch request and batch response, the `Status` message should be used
|
397
|
-
# directly inside batch response, one for each error sub-response. -
|
398
|
-
# Asynchronous operations. If an API call embeds asynchronous operation results
|
399
|
-
# in its response, the status of those operations should be represented directly
|
400
|
-
# using the `Status` message. - Logging. If some API errors are stored in logs,
|
401
|
-
# the message `Status` could be used directly after any stripping needed for
|
402
|
-
# security/privacy reasons.
|
403
|
-
class Status
|
404
|
-
include Google::Apis::Core::Hashable
|
405
|
-
|
406
|
-
# The status code, which should be an enum value of google.rpc.Code.
|
407
|
-
# Corresponds to the JSON property `code`
|
408
|
-
# @return [Fixnum]
|
409
|
-
attr_accessor :code
|
410
|
-
|
411
|
-
# A developer-facing error message, which should be in English. Any user-facing
|
412
|
-
# error message should be localized and sent in the google.rpc.Status.details
|
413
|
-
# field, or localized by the client.
|
414
|
-
# Corresponds to the JSON property `message`
|
415
|
-
# @return [String]
|
416
|
-
attr_accessor :message
|
417
|
-
|
418
|
-
# A list of messages that carry the error details. There will be a common set of
|
419
|
-
# message types for APIs to use.
|
420
|
-
# Corresponds to the JSON property `details`
|
421
|
-
# @return [Array<Hash<String,Object>>]
|
422
|
-
attr_accessor :details
|
423
|
-
|
424
|
-
def initialize(**args)
|
425
|
-
update!(**args)
|
426
|
-
end
|
427
|
-
|
428
|
-
# Update properties of this object
|
429
|
-
def update!(**args)
|
430
|
-
@code = args[:code] if args.key?(:code)
|
431
|
-
@message = args[:message] if args.key?(:message)
|
432
|
-
@details = args[:details] if args.key?(:details)
|
433
|
-
end
|
434
|
-
end
|
435
|
-
|
436
1109
|
# The response message for Operations.ListOperations.
|
437
1110
|
class ListOperationsResponse
|
438
1111
|
include Google::Apis::Core::Hashable
|
@@ -1792,6 +2465,13 @@ module Google
|
|
1792
2465
|
attr_accessor :normalize_reference_names
|
1793
2466
|
alias_method :normalize_reference_names?, :normalize_reference_names
|
1794
2467
|
|
2468
|
+
# A mapping between info field keys and the InfoMergeOperations to be performed
|
2469
|
+
# on them. This is plumbed down to the MergeVariantRequests generated by the
|
2470
|
+
# resulting import job.
|
2471
|
+
# Corresponds to the JSON property `infoMergeConfig`
|
2472
|
+
# @return [Hash<String,String>]
|
2473
|
+
attr_accessor :info_merge_config
|
2474
|
+
|
1795
2475
|
def initialize(**args)
|
1796
2476
|
update!(**args)
|
1797
2477
|
end
|
@@ -1802,6 +2482,7 @@ module Google
|
|
1802
2482
|
@source_uris = args[:source_uris] if args.key?(:source_uris)
|
1803
2483
|
@format = args[:format] if args.key?(:format)
|
1804
2484
|
@normalize_reference_names = args[:normalize_reference_names] if args.key?(:normalize_reference_names)
|
2485
|
+
@info_merge_config = args[:info_merge_config] if args.key?(:info_merge_config)
|
1805
2486
|
end
|
1806
2487
|
end
|
1807
2488
|
|
@@ -2352,6 +3033,12 @@ module Google
|
|
2352
3033
|
# @return [Array<Google::Apis::GenomicsV1::Variant>]
|
2353
3034
|
attr_accessor :variants
|
2354
3035
|
|
3036
|
+
# A mapping between info field keys and the InfoMergeOperations to be performed
|
3037
|
+
# on them.
|
3038
|
+
# Corresponds to the JSON property `infoMergeConfig`
|
3039
|
+
# @return [Hash<String,String>]
|
3040
|
+
attr_accessor :info_merge_config
|
3041
|
+
|
2355
3042
|
def initialize(**args)
|
2356
3043
|
update!(**args)
|
2357
3044
|
end
|
@@ -2360,6 +3047,7 @@ module Google
|
|
2360
3047
|
def update!(**args)
|
2361
3048
|
@variant_set_id = args[:variant_set_id] if args.key?(:variant_set_id)
|
2362
3049
|
@variants = args[:variants] if args.key?(:variants)
|
3050
|
+
@info_merge_config = args[:info_merge_config] if args.key?(:info_merge_config)
|
2363
3051
|
end
|
2364
3052
|
end
|
2365
3053
|
|