google-api-client 0.13.2 → 0.13.3

data/generated/google/apis/genomics_v1alpha2/representations.rb

@@ -0,0 +1,449 @@
+# Copyright 2015 Google Inc.
+#
+# Licensed under the Apache License, Version 2.0 (the "License");
+# you may not use this file except in compliance with the License.
+# You may obtain a copy of the License at
+#
+#      http://www.apache.org/licenses/LICENSE-2.0
+#
+# Unless required by applicable law or agreed to in writing, software
+# distributed under the License is distributed on an "AS IS" BASIS,
+# WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
+# See the License for the specific language governing permissions and
+# limitations under the License.
+
+require 'date'
+require 'google/apis/core/base_service'
+require 'google/apis/core/json_representation'
+require 'google/apis/core/hashable'
+require 'google/apis/errors'
+
+module Google
+  module Apis
+    module GenomicsV1alpha2
+      
+      class CancelOperationRequest
+        class Representation < Google::Apis::Core::JsonRepresentation; end
+      
+        include Google::Apis::Core::JsonObjectSupport
+      end
+      
+      class ComputeEngine
+        class Representation < Google::Apis::Core::JsonRepresentation; end
+      
+        include Google::Apis::Core::JsonObjectSupport
+      end
+      
+      class ControllerConfig
+        class Representation < Google::Apis::Core::JsonRepresentation; end
+      
+        include Google::Apis::Core::JsonObjectSupport
+      end
+      
+      class Disk
+        class Representation < Google::Apis::Core::JsonRepresentation; end
+      
+        include Google::Apis::Core::JsonObjectSupport
+      end
+      
+      class DockerExecutor
+        class Representation < Google::Apis::Core::JsonRepresentation; end
+      
+        include Google::Apis::Core::JsonObjectSupport
+      end
+      
+      class Empty
+        class Representation < Google::Apis::Core::JsonRepresentation; end
+      
+        include Google::Apis::Core::JsonObjectSupport
+      end
+      
+      class ImportReadGroupSetsResponse
+        class Representation < Google::Apis::Core::JsonRepresentation; end
+      
+        include Google::Apis::Core::JsonObjectSupport
+      end
+      
+      class ImportVariantsResponse
+        class Representation < Google::Apis::Core::JsonRepresentation; end
+      
+        include Google::Apis::Core::JsonObjectSupport
+      end
+      
+      class ListOperationsResponse
+        class Representation < Google::Apis::Core::JsonRepresentation; end
+      
+        include Google::Apis::Core::JsonObjectSupport
+      end
+      
+      class ListPipelinesResponse
+        class Representation < Google::Apis::Core::JsonRepresentation; end
+      
+        include Google::Apis::Core::JsonObjectSupport
+      end
+      
+      class LocalCopy
+        class Representation < Google::Apis::Core::JsonRepresentation; end
+      
+        include Google::Apis::Core::JsonObjectSupport
+      end
+      
+      class LoggingOptions
+        class Representation < Google::Apis::Core::JsonRepresentation; end
+      
+        include Google::Apis::Core::JsonObjectSupport
+      end
+      
+      class Operation
+        class Representation < Google::Apis::Core::JsonRepresentation; end
+      
+        include Google::Apis::Core::JsonObjectSupport
+      end
+      
+      class OperationEvent
+        class Representation < Google::Apis::Core::JsonRepresentation; end
+      
+        include Google::Apis::Core::JsonObjectSupport
+      end
+      
+      class OperationMetadata
+        class Representation < Google::Apis::Core::JsonRepresentation; end
+      
+        include Google::Apis::Core::JsonObjectSupport
+      end
+      
+      class Pipeline
+        class Representation < Google::Apis::Core::JsonRepresentation; end
+      
+        include Google::Apis::Core::JsonObjectSupport
+      end
+      
+      class PipelineParameter
+        class Representation < Google::Apis::Core::JsonRepresentation; end
+      
+        include Google::Apis::Core::JsonObjectSupport
+      end
+      
+      class PipelineResources
+        class Representation < Google::Apis::Core::JsonRepresentation; end
+      
+        include Google::Apis::Core::JsonObjectSupport
+      end
+      
+      class RepeatedString
+        class Representation < Google::Apis::Core::JsonRepresentation; end
+      
+        include Google::Apis::Core::JsonObjectSupport
+      end
+      
+      class RunPipelineArgs
+        class Representation < Google::Apis::Core::JsonRepresentation; end
+      
+        include Google::Apis::Core::JsonObjectSupport
+      end
+      
+      class RunPipelineRequest
+        class Representation < Google::Apis::Core::JsonRepresentation; end
+      
+        include Google::Apis::Core::JsonObjectSupport
+      end
+      
+      class RuntimeMetadata
+        class Representation < Google::Apis::Core::JsonRepresentation; end
+      
+        include Google::Apis::Core::JsonObjectSupport
+      end
+      
+      class ServiceAccount
+        class Representation < Google::Apis::Core::JsonRepresentation; end
+      
+        include Google::Apis::Core::JsonObjectSupport
+      end
+      
+      class SetOperationStatusRequest
+        class Representation < Google::Apis::Core::JsonRepresentation; end
+      
+        include Google::Apis::Core::JsonObjectSupport
+      end
+      
+      class Status
+        class Representation < Google::Apis::Core::JsonRepresentation; end
+      
+        include Google::Apis::Core::JsonObjectSupport
+      end
+      
+      class TimestampEvent
+        class Representation < Google::Apis::Core::JsonRepresentation; end
+      
+        include Google::Apis::Core::JsonObjectSupport
+      end
+      
+      class CancelOperationRequest
+        # @private
+        class Representation < Google::Apis::Core::JsonRepresentation
+        end
+      end
+      
+      class ComputeEngine
+        # @private
+        class Representation < Google::Apis::Core::JsonRepresentation
+          collection :disk_names, as: 'diskNames'
+          property :instance_name, as: 'instanceName'
+          property :machine_type, as: 'machineType'
+          property :zone, as: 'zone'
+        end
+      end
+      
+      class ControllerConfig
+        # @private
+        class Representation < Google::Apis::Core::JsonRepresentation
+          property :cmd, as: 'cmd'
+          hash :disks, as: 'disks'
+          property :gcs_log_path, as: 'gcsLogPath'
+          hash :gcs_sinks, as: 'gcsSinks', class: Google::Apis::GenomicsV1alpha2::RepeatedString, decorator: Google::Apis::GenomicsV1alpha2::RepeatedString::Representation
+      
+          hash :gcs_sources, as: 'gcsSources', class: Google::Apis::GenomicsV1alpha2::RepeatedString, decorator: Google::Apis::GenomicsV1alpha2::RepeatedString::Representation
+      
+          property :image, as: 'image'
+          property :machine_type, as: 'machineType'
+          hash :vars, as: 'vars'
+        end
+      end
+      
+      class Disk
+        # @private
+        class Representation < Google::Apis::Core::JsonRepresentation
+          property :auto_delete, as: 'autoDelete'
+          property :mount_point, as: 'mountPoint'
+          property :name, as: 'name'
+          property :read_only, as: 'readOnly'
+          property :size_gb, as: 'sizeGb'
+          property :source, as: 'source'
+          property :type, as: 'type'
+        end
+      end
+      
+      class DockerExecutor
+        # @private
+        class Representation < Google::Apis::Core::JsonRepresentation
+          property :cmd, as: 'cmd'
+          property :image_name, as: 'imageName'
+        end
+      end
+      
+      class Empty
+        # @private
+        class Representation < Google::Apis::Core::JsonRepresentation
+        end
+      end
+      
+      class ImportReadGroupSetsResponse
+        # @private
+        class Representation < Google::Apis::Core::JsonRepresentation
+          collection :read_group_set_ids, as: 'readGroupSetIds'
+        end
+      end
+      
+      class ImportVariantsResponse
+        # @private
+        class Representation < Google::Apis::Core::JsonRepresentation
+          collection :call_set_ids, as: 'callSetIds'
+        end
+      end
+      
+      class ListOperationsResponse
+        # @private
+        class Representation < Google::Apis::Core::JsonRepresentation
+          property :next_page_token, as: 'nextPageToken'
+          collection :operations, as: 'operations', class: Google::Apis::GenomicsV1alpha2::Operation, decorator: Google::Apis::GenomicsV1alpha2::Operation::Representation
+      
+        end
+      end
+      
+      class ListPipelinesResponse
+        # @private
+        class Representation < Google::Apis::Core::JsonRepresentation
+          property :next_page_token, as: 'nextPageToken'
+          collection :pipelines, as: 'pipelines', class: Google::Apis::GenomicsV1alpha2::Pipeline, decorator: Google::Apis::GenomicsV1alpha2::Pipeline::Representation
+      
+        end
+      end
+      
+      class LocalCopy
+        # @private
+        class Representation < Google::Apis::Core::JsonRepresentation
+          property :disk, as: 'disk'
+          property :path, as: 'path'
+        end
+      end
+      
+      class LoggingOptions
+        # @private
+        class Representation < Google::Apis::Core::JsonRepresentation
+          property :gcs_path, as: 'gcsPath'
+        end
+      end
+      
+      class Operation
+        # @private
+        class Representation < Google::Apis::Core::JsonRepresentation
+          property :done, as: 'done'
+          property :error, as: 'error', class: Google::Apis::GenomicsV1alpha2::Status, decorator: Google::Apis::GenomicsV1alpha2::Status::Representation
+      
+          hash :metadata, as: 'metadata'
+          property :name, as: 'name'
+          hash :response, as: 'response'
+        end
+      end
+      
+      class OperationEvent
+        # @private
+        class Representation < Google::Apis::Core::JsonRepresentation
+          property :description, as: 'description'
+          property :end_time, as: 'endTime'
+          property :start_time, as: 'startTime'
+        end
+      end
+      
+      class OperationMetadata
+        # @private
+        class Representation < Google::Apis::Core::JsonRepresentation
+          property :client_id, as: 'clientId'
+          property :create_time, as: 'createTime'
+          property :end_time, as: 'endTime'
+          collection :events, as: 'events', class: Google::Apis::GenomicsV1alpha2::OperationEvent, decorator: Google::Apis::GenomicsV1alpha2::OperationEvent::Representation
+      
+          hash :labels, as: 'labels'
+          property :project_id, as: 'projectId'
+          hash :request, as: 'request'
+          hash :runtime_metadata, as: 'runtimeMetadata'
+          property :start_time, as: 'startTime'
+        end
+      end
+      
+      class Pipeline
+        # @private
+        class Representation < Google::Apis::Core::JsonRepresentation
+          property :description, as: 'description'
+          property :docker, as: 'docker', class: Google::Apis::GenomicsV1alpha2::DockerExecutor, decorator: Google::Apis::GenomicsV1alpha2::DockerExecutor::Representation
+      
+          collection :input_parameters, as: 'inputParameters', class: Google::Apis::GenomicsV1alpha2::PipelineParameter, decorator: Google::Apis::GenomicsV1alpha2::PipelineParameter::Representation
+      
+          property :name, as: 'name'
+          collection :output_parameters, as: 'outputParameters', class: Google::Apis::GenomicsV1alpha2::PipelineParameter, decorator: Google::Apis::GenomicsV1alpha2::PipelineParameter::Representation
+      
+          property :pipeline_id, as: 'pipelineId'
+          property :project_id, as: 'projectId'
+          property :resources, as: 'resources', class: Google::Apis::GenomicsV1alpha2::PipelineResources, decorator: Google::Apis::GenomicsV1alpha2::PipelineResources::Representation
+      
+        end
+      end
+      
+      class PipelineParameter
+        # @private
+        class Representation < Google::Apis::Core::JsonRepresentation
+          property :default_value, as: 'defaultValue'
+          property :description, as: 'description'
+          property :local_copy, as: 'localCopy', class: Google::Apis::GenomicsV1alpha2::LocalCopy, decorator: Google::Apis::GenomicsV1alpha2::LocalCopy::Representation
+      
+          property :name, as: 'name'
+        end
+      end
+      
+      class PipelineResources
+        # @private
+        class Representation < Google::Apis::Core::JsonRepresentation
+          property :boot_disk_size_gb, as: 'bootDiskSizeGb'
+          collection :disks, as: 'disks', class: Google::Apis::GenomicsV1alpha2::Disk, decorator: Google::Apis::GenomicsV1alpha2::Disk::Representation
+      
+          property :minimum_cpu_cores, as: 'minimumCpuCores'
+          property :minimum_ram_gb, as: 'minimumRamGb'
+          property :no_address, as: 'noAddress'
+          property :preemptible, as: 'preemptible'
+          collection :zones, as: 'zones'
+        end
+      end
+      
+      class RepeatedString
+        # @private
+        class Representation < Google::Apis::Core::JsonRepresentation
+          collection :values, as: 'values'
+        end
+      end
+      
+      class RunPipelineArgs
+        # @private
+        class Representation < Google::Apis::Core::JsonRepresentation
+          property :client_id, as: 'clientId'
+          hash :inputs, as: 'inputs'
+          property :keep_vm_alive_on_failure_duration, as: 'keepVmAliveOnFailureDuration'
+          hash :labels, as: 'labels'
+          property :logging, as: 'logging', class: Google::Apis::GenomicsV1alpha2::LoggingOptions, decorator: Google::Apis::GenomicsV1alpha2::LoggingOptions::Representation
+      
+          hash :outputs, as: 'outputs'
+          property :project_id, as: 'projectId'
+          property :resources, as: 'resources', class: Google::Apis::GenomicsV1alpha2::PipelineResources, decorator: Google::Apis::GenomicsV1alpha2::PipelineResources::Representation
+      
+          property :service_account, as: 'serviceAccount', class: Google::Apis::GenomicsV1alpha2::ServiceAccount, decorator: Google::Apis::GenomicsV1alpha2::ServiceAccount::Representation
+      
+        end
+      end
+      
+      class RunPipelineRequest
+        # @private
+        class Representation < Google::Apis::Core::JsonRepresentation
+          property :ephemeral_pipeline, as: 'ephemeralPipeline', class: Google::Apis::GenomicsV1alpha2::Pipeline, decorator: Google::Apis::GenomicsV1alpha2::Pipeline::Representation
+      
+          property :pipeline_args, as: 'pipelineArgs', class: Google::Apis::GenomicsV1alpha2::RunPipelineArgs, decorator: Google::Apis::GenomicsV1alpha2::RunPipelineArgs::Representation
+      
+          property :pipeline_id, as: 'pipelineId'
+        end
+      end
+      
+      class RuntimeMetadata
+        # @private
+        class Representation < Google::Apis::Core::JsonRepresentation
+          property :compute_engine, as: 'computeEngine', class: Google::Apis::GenomicsV1alpha2::ComputeEngine, decorator: Google::Apis::GenomicsV1alpha2::ComputeEngine::Representation
+      
+        end
+      end
+      
+      class ServiceAccount
+        # @private
+        class Representation < Google::Apis::Core::JsonRepresentation
+          property :email, as: 'email'
+          collection :scopes, as: 'scopes'
+        end
+      end
+      
+      class SetOperationStatusRequest
+        # @private
+        class Representation < Google::Apis::Core::JsonRepresentation
+          property :error_code, as: 'errorCode'
+          property :error_message, as: 'errorMessage'
+          property :operation_id, as: 'operationId'
+          collection :timestamp_events, as: 'timestampEvents', class: Google::Apis::GenomicsV1alpha2::TimestampEvent, decorator: Google::Apis::GenomicsV1alpha2::TimestampEvent::Representation
+      
+          property :validation_token, :numeric_string => true, as: 'validationToken'
+        end
+      end
+      
+      class Status
+        # @private
+        class Representation < Google::Apis::Core::JsonRepresentation
+          property :code, as: 'code'
+          collection :details, as: 'details'
+          property :message, as: 'message'
+        end
+      end
+      
+      class TimestampEvent
+        # @private
+        class Representation < Google::Apis::Core::JsonRepresentation
+          property :description, as: 'description'
+          property :timestamp, as: 'timestamp'
+        end
+      end
+    end
+  end
+end

data/generated/google/apis/genomics_v1alpha2/service.rb

@@ -0,0 +1,426 @@
+# Copyright 2015 Google Inc.
+#
+# Licensed under the Apache License, Version 2.0 (the "License");
+# you may not use this file except in compliance with the License.
+# You may obtain a copy of the License at
+#
+#      http://www.apache.org/licenses/LICENSE-2.0
+#
+# Unless required by applicable law or agreed to in writing, software
+# distributed under the License is distributed on an "AS IS" BASIS,
+# WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
+# See the License for the specific language governing permissions and
+# limitations under the License.
+
+require 'google/apis/core/base_service'
+require 'google/apis/core/json_representation'
+require 'google/apis/core/hashable'
+require 'google/apis/errors'
+
+module Google
+  module Apis
+    module GenomicsV1alpha2
+      # Genomics API
+      #
+      # Upload, process, query, and search Genomics data in the cloud.
+      #
+      # @example
+      #    require 'google/apis/genomics_v1alpha2'
+      #
+      #    Genomics = Google::Apis::GenomicsV1alpha2 # Alias the module
+      #    service = Genomics::GenomicsService.new
+      #
+      # @see https://cloud.google.com/genomics
+      class GenomicsService < Google::Apis::Core::BaseService
+        # @return [String]
+        #  API key. Your API key identifies your project and provides you with API access,
+        #  quota, and reports. Required unless you provide an OAuth 2.0 token.
+        attr_accessor :key
+
+        # @return [String]
+        #  Available to use for quota purposes for server-side applications. Can be any
+        #  arbitrary string assigned to a user, but should not exceed 40 characters.
+        attr_accessor :quota_user
+
+        def initialize
+          super('https://genomics.googleapis.com/', '')
+          @batch_path = 'batch'
+        end
+        
+        # Starts asynchronous cancellation on a long-running operation. The server makes
+        # a best effort to cancel the operation, but success is not guaranteed. Clients
+        # may use Operations.GetOperation or Operations.ListOperations to check whether
+        # the cancellation succeeded or the operation completed despite cancellation.
+        # @param [String] name
+        #   The name of the operation resource to be cancelled.
+        # @param [Google::Apis::GenomicsV1alpha2::CancelOperationRequest] cancel_operation_request_object
+        # @param [String] fields
+        #   Selector specifying which fields to include in a partial response.
+        # @param [String] quota_user
+        #   Available to use for quota purposes for server-side applications. Can be any
+        #   arbitrary string assigned to a user, but should not exceed 40 characters.
+        # @param [Google::Apis::RequestOptions] options
+        #   Request-specific options
+        #
+        # @yield [result, err] Result & error if block supplied
+        # @yieldparam result [Google::Apis::GenomicsV1alpha2::Empty] parsed result object
+        # @yieldparam err [StandardError] error object if request failed
+        #
+        # @return [Google::Apis::GenomicsV1alpha2::Empty]
+        #
+        # @raise [Google::Apis::ServerError] An error occurred on the server and the request can be retried
+        # @raise [Google::Apis::ClientError] The request is invalid and should not be retried without modification
+        # @raise [Google::Apis::AuthorizationError] Authorization is required
+        def cancel_operation(name, cancel_operation_request_object = nil, fields: nil, quota_user: nil, options: nil, &block)
+          command =  make_simple_command(:post, 'v1alpha2/{+name}:cancel', options)
+          command.request_representation = Google::Apis::GenomicsV1alpha2::CancelOperationRequest::Representation
+          command.request_object = cancel_operation_request_object
+          command.response_representation = Google::Apis::GenomicsV1alpha2::Empty::Representation
+          command.response_class = Google::Apis::GenomicsV1alpha2::Empty
+          command.params['name'] = name unless name.nil?
+          command.query['fields'] = fields unless fields.nil?
+          command.query['quotaUser'] = quota_user unless quota_user.nil?
+          execute_or_queue_command(command, &block)
+        end
+        
+        # Gets the latest state of a long-running operation.  Clients can use this
+        # method to poll the operation result at intervals as recommended by the API
+        # service.
+        # @param [String] name
+        #   The name of the operation resource.
+        # @param [String] fields
+        #   Selector specifying which fields to include in a partial response.
+        # @param [String] quota_user
+        #   Available to use for quota purposes for server-side applications. Can be any
+        #   arbitrary string assigned to a user, but should not exceed 40 characters.
+        # @param [Google::Apis::RequestOptions] options
+        #   Request-specific options
+        #
+        # @yield [result, err] Result & error if block supplied
+        # @yieldparam result [Google::Apis::GenomicsV1alpha2::Operation] parsed result object
+        # @yieldparam err [StandardError] error object if request failed
+        #
+        # @return [Google::Apis::GenomicsV1alpha2::Operation]
+        #
+        # @raise [Google::Apis::ServerError] An error occurred on the server and the request can be retried
+        # @raise [Google::Apis::ClientError] The request is invalid and should not be retried without modification
+        # @raise [Google::Apis::AuthorizationError] Authorization is required
+        def get_operation(name, fields: nil, quota_user: nil, options: nil, &block)
+          command =  make_simple_command(:get, 'v1alpha2/{+name}', options)
+          command.response_representation = Google::Apis::GenomicsV1alpha2::Operation::Representation
+          command.response_class = Google::Apis::GenomicsV1alpha2::Operation
+          command.params['name'] = name unless name.nil?
+          command.query['fields'] = fields unless fields.nil?
+          command.query['quotaUser'] = quota_user unless quota_user.nil?
+          execute_or_queue_command(command, &block)
+        end
+        
+        # Lists operations that match the specified filter in the request.
+        # @param [String] name
+        #   The name of the operation's parent resource.
+        # @param [String] filter
+        #   A string for filtering Operations.
+        #   The following filter fields are supported&#58;
+        #   * projectId&#58; Required. Corresponds to
+        #   OperationMetadata.projectId.
+        #   * createTime&#58; The time this job was created, in seconds from the
+        #   [epoch](http://en.wikipedia.org/wiki/Unix_time). Can use `>=` and/or `<=`
+        #   operators.
+        #   * status&#58; Can be `RUNNING`, `SUCCESS`, `FAILURE`, or `CANCELED`. Only
+        #   one status may be specified.
+        #   * labels.key where key is a label key.
+        #   Examples&#58;
+        #   * `projectId = my-project AND createTime >= 1432140000`
+        #   * `projectId = my-project AND createTime >= 1432140000 AND createTime <=
+        #   1432150000 AND status = RUNNING`
+        #   * `projectId = my-project AND labels.color = *`
+        #   * `projectId = my-project AND labels.color = red`
+        # @param [Fixnum] page_size
+        #   The maximum number of results to return. If unspecified, defaults to
+        #   256. The maximum value is 2048.
+        # @param [String] page_token
+        #   The standard list page token.
+        # @param [String] fields
+        #   Selector specifying which fields to include in a partial response.
+        # @param [String] quota_user
+        #   Available to use for quota purposes for server-side applications. Can be any
+        #   arbitrary string assigned to a user, but should not exceed 40 characters.
+        # @param [Google::Apis::RequestOptions] options
+        #   Request-specific options
+        #
+        # @yield [result, err] Result & error if block supplied
+        # @yieldparam result [Google::Apis::GenomicsV1alpha2::ListOperationsResponse] parsed result object
+        # @yieldparam err [StandardError] error object if request failed
+        #
+        # @return [Google::Apis::GenomicsV1alpha2::ListOperationsResponse]
+        #
+        # @raise [Google::Apis::ServerError] An error occurred on the server and the request can be retried
+        # @raise [Google::Apis::ClientError] The request is invalid and should not be retried without modification
+        # @raise [Google::Apis::AuthorizationError] Authorization is required
+        def list_operations(name, filter: nil, page_size: nil, page_token: nil, fields: nil, quota_user: nil, options: nil, &block)
+          command =  make_simple_command(:get, 'v1alpha2/{+name}', options)
+          command.response_representation = Google::Apis::GenomicsV1alpha2::ListOperationsResponse::Representation
+          command.response_class = Google::Apis::GenomicsV1alpha2::ListOperationsResponse
+          command.params['name'] = name unless name.nil?
+          command.query['filter'] = filter unless filter.nil?
+          command.query['pageSize'] = page_size unless page_size.nil?
+          command.query['pageToken'] = page_token unless page_token.nil?
+          command.query['fields'] = fields unless fields.nil?
+          command.query['quotaUser'] = quota_user unless quota_user.nil?
+          execute_or_queue_command(command, &block)
+        end
+        
+        # Creates a pipeline that can be run later. Create takes a Pipeline that
+        # has all fields other than `pipelineId` populated, and then returns
+        # the same pipeline with `pipelineId` populated. This id can be used
+        # to run the pipeline.
+        # Caller must have WRITE permission to the project.
+        # @param [Google::Apis::GenomicsV1alpha2::Pipeline] pipeline_object
+        # @param [String] fields
+        #   Selector specifying which fields to include in a partial response.
+        # @param [String] quota_user
+        #   Available to use for quota purposes for server-side applications. Can be any
+        #   arbitrary string assigned to a user, but should not exceed 40 characters.
+        # @param [Google::Apis::RequestOptions] options
+        #   Request-specific options
+        #
+        # @yield [result, err] Result & error if block supplied
+        # @yieldparam result [Google::Apis::GenomicsV1alpha2::Pipeline] parsed result object
+        # @yieldparam err [StandardError] error object if request failed
+        #
+        # @return [Google::Apis::GenomicsV1alpha2::Pipeline]
+        #
+        # @raise [Google::Apis::ServerError] An error occurred on the server and the request can be retried
+        # @raise [Google::Apis::ClientError] The request is invalid and should not be retried without modification
+        # @raise [Google::Apis::AuthorizationError] Authorization is required
+        def create_pipeline(pipeline_object = nil, fields: nil, quota_user: nil, options: nil, &block)
+          command =  make_simple_command(:post, 'v1alpha2/pipelines', options)
+          command.request_representation = Google::Apis::GenomicsV1alpha2::Pipeline::Representation
+          command.request_object = pipeline_object
+          command.response_representation = Google::Apis::GenomicsV1alpha2::Pipeline::Representation
+          command.response_class = Google::Apis::GenomicsV1alpha2::Pipeline
+          command.query['fields'] = fields unless fields.nil?
+          command.query['quotaUser'] = quota_user unless quota_user.nil?
+          execute_or_queue_command(command, &block)
+        end
+        
+        # Deletes a pipeline based on ID.
+        # Caller must have WRITE permission to the project.
+        # @param [String] pipeline_id
+        #   Caller must have WRITE access to the project in which this pipeline
+        #   is defined.
+        # @param [String] fields
+        #   Selector specifying which fields to include in a partial response.
+        # @param [String] quota_user
+        #   Available to use for quota purposes for server-side applications. Can be any
+        #   arbitrary string assigned to a user, but should not exceed 40 characters.
+        # @param [Google::Apis::RequestOptions] options
+        #   Request-specific options
+        #
+        # @yield [result, err] Result & error if block supplied
+        # @yieldparam result [Google::Apis::GenomicsV1alpha2::Empty] parsed result object
+        # @yieldparam err [StandardError] error object if request failed
+        #
+        # @return [Google::Apis::GenomicsV1alpha2::Empty]
+        #
+        # @raise [Google::Apis::ServerError] An error occurred on the server and the request can be retried
+        # @raise [Google::Apis::ClientError] The request is invalid and should not be retried without modification
+        # @raise [Google::Apis::AuthorizationError] Authorization is required
+        def delete_pipeline(pipeline_id, fields: nil, quota_user: nil, options: nil, &block)
+          command =  make_simple_command(:delete, 'v1alpha2/pipelines/{pipelineId}', options)
+          command.response_representation = Google::Apis::GenomicsV1alpha2::Empty::Representation
+          command.response_class = Google::Apis::GenomicsV1alpha2::Empty
+          command.params['pipelineId'] = pipeline_id unless pipeline_id.nil?
+          command.query['fields'] = fields unless fields.nil?
+          command.query['quotaUser'] = quota_user unless quota_user.nil?
+          execute_or_queue_command(command, &block)
+        end
+        
+        # Retrieves a pipeline based on ID.
+        # Caller must have READ permission to the project.
+        # @param [String] pipeline_id
+        #   Caller must have READ access to the project in which this pipeline
+        #   is defined.
+        # @param [String] fields
+        #   Selector specifying which fields to include in a partial response.
+        # @param [String] quota_user
+        #   Available to use for quota purposes for server-side applications. Can be any
+        #   arbitrary string assigned to a user, but should not exceed 40 characters.
+        # @param [Google::Apis::RequestOptions] options
+        #   Request-specific options
+        #
+        # @yield [result, err] Result & error if block supplied
+        # @yieldparam result [Google::Apis::GenomicsV1alpha2::Pipeline] parsed result object
+        # @yieldparam err [StandardError] error object if request failed
+        #
+        # @return [Google::Apis::GenomicsV1alpha2::Pipeline]
+        #
+        # @raise [Google::Apis::ServerError] An error occurred on the server and the request can be retried
+        # @raise [Google::Apis::ClientError] The request is invalid and should not be retried without modification
+        # @raise [Google::Apis::AuthorizationError] Authorization is required
+        def get_pipeline(pipeline_id, fields: nil, quota_user: nil, options: nil, &block)
+          command =  make_simple_command(:get, 'v1alpha2/pipelines/{pipelineId}', options)
+          command.response_representation = Google::Apis::GenomicsV1alpha2::Pipeline::Representation
+          command.response_class = Google::Apis::GenomicsV1alpha2::Pipeline
+          command.params['pipelineId'] = pipeline_id unless pipeline_id.nil?
+          command.query['fields'] = fields unless fields.nil?
+          command.query['quotaUser'] = quota_user unless quota_user.nil?
+          execute_or_queue_command(command, &block)
+        end
+        
+        # Gets controller configuration information. Should only be called
+        # by VMs created by the Pipelines Service and not by end users.
+        # @param [String] operation_id
+        #   The operation to retrieve controller configuration for.
+        # @param [Fixnum] validation_token
+        # @param [String] fields
+        #   Selector specifying which fields to include in a partial response.
+        # @param [String] quota_user
+        #   Available to use for quota purposes for server-side applications. Can be any
+        #   arbitrary string assigned to a user, but should not exceed 40 characters.
+        # @param [Google::Apis::RequestOptions] options
+        #   Request-specific options
+        #
+        # @yield [result, err] Result & error if block supplied
+        # @yieldparam result [Google::Apis::GenomicsV1alpha2::ControllerConfig] parsed result object
+        # @yieldparam err [StandardError] error object if request failed
+        #
+        # @return [Google::Apis::GenomicsV1alpha2::ControllerConfig]
+        #
+        # @raise [Google::Apis::ServerError] An error occurred on the server and the request can be retried
+        # @raise [Google::Apis::ClientError] The request is invalid and should not be retried without modification
+        # @raise [Google::Apis::AuthorizationError] Authorization is required
+        def get_pipeline_controller_config(operation_id: nil, validation_token: nil, fields: nil, quota_user: nil, options: nil, &block)
+          command =  make_simple_command(:get, 'v1alpha2/pipelines:getControllerConfig', options)
+          command.response_representation = Google::Apis::GenomicsV1alpha2::ControllerConfig::Representation
+          command.response_class = Google::Apis::GenomicsV1alpha2::ControllerConfig
+          command.query['operationId'] = operation_id unless operation_id.nil?
+          command.query['validationToken'] = validation_token unless validation_token.nil?
+          command.query['fields'] = fields unless fields.nil?
+          command.query['quotaUser'] = quota_user unless quota_user.nil?
+          execute_or_queue_command(command, &block)
+        end
+        
+        # Lists pipelines.
+        # Caller must have READ permission to the project.
+        # @param [String] name_prefix
+        #   Pipelines with names that match this prefix should be
+        #   returned.  If unspecified, all pipelines in the project, up to
+        #   `pageSize`, will be returned.
+        # @param [Fixnum] page_size
+        #   Number of pipelines to return at once. Defaults to 256, and max
+        #   is 2048.
+        # @param [String] page_token
+        #   Token to use to indicate where to start getting results.
+        #   If unspecified, returns the first page of results.
+        # @param [String] project_id
+        #   Required. The name of the project to search for pipelines. Caller
+        #   must have READ access to this project.
+        # @param [String] fields
+        #   Selector specifying which fields to include in a partial response.
+        # @param [String] quota_user
+        #   Available to use for quota purposes for server-side applications. Can be any
+        #   arbitrary string assigned to a user, but should not exceed 40 characters.
+        # @param [Google::Apis::RequestOptions] options
+        #   Request-specific options
+        #
+        # @yield [result, err] Result & error if block supplied
+        # @yieldparam result [Google::Apis::GenomicsV1alpha2::ListPipelinesResponse] parsed result object
+        # @yieldparam err [StandardError] error object if request failed
+        #
+        # @return [Google::Apis::GenomicsV1alpha2::ListPipelinesResponse]
+        #
+        # @raise [Google::Apis::ServerError] An error occurred on the server and the request can be retried
+        # @raise [Google::Apis::ClientError] The request is invalid and should not be retried without modification
+        # @raise [Google::Apis::AuthorizationError] Authorization is required
+        def list_pipelines(name_prefix: nil, page_size: nil, page_token: nil, project_id: nil, fields: nil, quota_user: nil, options: nil, &block)
+          command =  make_simple_command(:get, 'v1alpha2/pipelines', options)
+          command.response_representation = Google::Apis::GenomicsV1alpha2::ListPipelinesResponse::Representation
+          command.response_class = Google::Apis::GenomicsV1alpha2::ListPipelinesResponse
+          command.query['namePrefix'] = name_prefix unless name_prefix.nil?
+          command.query['pageSize'] = page_size unless page_size.nil?
+          command.query['pageToken'] = page_token unless page_token.nil?
+          command.query['projectId'] = project_id unless project_id.nil?
+          command.query['fields'] = fields unless fields.nil?
+          command.query['quotaUser'] = quota_user unless quota_user.nil?
+          execute_or_queue_command(command, &block)
+        end
+        
+        # Runs a pipeline. If `pipelineId` is specified in the request, then
+        # run a saved pipeline. If `ephemeralPipeline` is specified, then run
+        # that pipeline once without saving a copy.
+        # The caller must have READ permission to the project where the pipeline
+        # is stored and WRITE permission to the project where the pipeline will be
+        # run, as VMs will be created and storage will be used.
+        # If a pipeline operation is still running after 6 days, it will be canceled.
+        # @param [Google::Apis::GenomicsV1alpha2::RunPipelineRequest] run_pipeline_request_object
+        # @param [String] fields
+        #   Selector specifying which fields to include in a partial response.
+        # @param [String] quota_user
+        #   Available to use for quota purposes for server-side applications. Can be any
+        #   arbitrary string assigned to a user, but should not exceed 40 characters.
+        # @param [Google::Apis::RequestOptions] options
+        #   Request-specific options
+        #
+        # @yield [result, err] Result & error if block supplied
+        # @yieldparam result [Google::Apis::GenomicsV1alpha2::Operation] parsed result object
+        # @yieldparam err [StandardError] error object if request failed
+        #
+        # @return [Google::Apis::GenomicsV1alpha2::Operation]
+        #
+        # @raise [Google::Apis::ServerError] An error occurred on the server and the request can be retried
+        # @raise [Google::Apis::ClientError] The request is invalid and should not be retried without modification
+        # @raise [Google::Apis::AuthorizationError] Authorization is required
+        def run_pipeline(run_pipeline_request_object = nil, fields: nil, quota_user: nil, options: nil, &block)
+          command =  make_simple_command(:post, 'v1alpha2/pipelines:run', options)
+          command.request_representation = Google::Apis::GenomicsV1alpha2::RunPipelineRequest::Representation
+          command.request_object = run_pipeline_request_object
+          command.response_representation = Google::Apis::GenomicsV1alpha2::Operation::Representation
+          command.response_class = Google::Apis::GenomicsV1alpha2::Operation
+          command.query['fields'] = fields unless fields.nil?
+          command.query['quotaUser'] = quota_user unless quota_user.nil?
+          execute_or_queue_command(command, &block)
+        end
+        
+        # Sets status of a given operation. Any new timestamps (as determined by
+        # description) are appended to TimestampEvents. Should only be called by VMs
+        # created by the Pipelines Service and not by end users.
+        # @param [Google::Apis::GenomicsV1alpha2::SetOperationStatusRequest] set_operation_status_request_object
+        # @param [String] fields
+        #   Selector specifying which fields to include in a partial response.
+        # @param [String] quota_user
+        #   Available to use for quota purposes for server-side applications. Can be any
+        #   arbitrary string assigned to a user, but should not exceed 40 characters.
+        # @param [Google::Apis::RequestOptions] options
+        #   Request-specific options
+        #
+        # @yield [result, err] Result & error if block supplied
+        # @yieldparam result [Google::Apis::GenomicsV1alpha2::Empty] parsed result object
+        # @yieldparam err [StandardError] error object if request failed
+        #
+        # @return [Google::Apis::GenomicsV1alpha2::Empty]
+        #
+        # @raise [Google::Apis::ServerError] An error occurred on the server and the request can be retried
+        # @raise [Google::Apis::ClientError] The request is invalid and should not be retried without modification
+        # @raise [Google::Apis::AuthorizationError] Authorization is required
+        def set_pipeline_operation_status(set_operation_status_request_object = nil, fields: nil, quota_user: nil, options: nil, &block)
+          command =  make_simple_command(:put, 'v1alpha2/pipelines:setOperationStatus', options)
+          command.request_representation = Google::Apis::GenomicsV1alpha2::SetOperationStatusRequest::Representation
+          command.request_object = set_operation_status_request_object
+          command.response_representation = Google::Apis::GenomicsV1alpha2::Empty::Representation
+          command.response_class = Google::Apis::GenomicsV1alpha2::Empty
+          command.query['fields'] = fields unless fields.nil?
+          command.query['quotaUser'] = quota_user unless quota_user.nil?
+          execute_or_queue_command(command, &block)
+        end
+
+        protected
+
+        def apply_command_defaults(command)
+          command.query['key'] = key unless key.nil?
+          command.query['quotaUser'] = quota_user unless quota_user.nil?
+        end
+      end
+    end
+  end
+end