google-api-client 0.11.3 → 0.12.0
This diff represents the content of publicly available package versions that have been released to one of the supported registries. The information contained in this diff is provided for informational purposes only and reflects changes between package versions as they appear in their respective public registries.
- checksums.yaml +4 -4
- data/CHANGELOG.md +51 -0
- data/api_names.yaml +32317 -34465
- data/generated/google/apis/acceleratedmobilepageurl_v1/classes.rb +44 -44
- data/generated/google/apis/acceleratedmobilepageurl_v1/representations.rb +14 -14
- data/generated/google/apis/acceleratedmobilepageurl_v1/service.rb +10 -10
- data/generated/google/apis/adexchangebuyer2_v2beta1.rb +1 -1
- data/generated/google/apis/adexchangebuyer2_v2beta1/classes.rb +305 -305
- data/generated/google/apis/adexchangebuyer2_v2beta1/representations.rb +82 -82
- data/generated/google/apis/adexchangebuyer2_v2beta1/service.rb +106 -106
- data/generated/google/apis/adexchangebuyer_v1_4/classes.rb +6 -6
- data/generated/google/apis/adexchangebuyer_v1_4/representations.rb +3 -3
- data/generated/google/apis/adexchangebuyer_v1_4/service.rb +3 -3
- data/generated/google/apis/adexchangeseller_v2_0/service.rb +10 -10
- data/generated/google/apis/admin_directory_v1/service.rb +26 -26
- data/generated/google/apis/adsense_v1_4.rb +1 -1
- data/generated/google/apis/adsense_v1_4/classes.rb +2 -2
- data/generated/google/apis/adsense_v1_4/representations.rb +3 -3
- data/generated/google/apis/adsense_v1_4/service.rb +44 -44
- data/generated/google/apis/adsensehost_v4_1.rb +1 -1
- data/generated/google/apis/adsensehost_v4_1/service.rb +22 -22
- data/generated/google/apis/analytics_v3/classes.rb +3 -3
- data/generated/google/apis/analytics_v3/representations.rb +3 -3
- data/generated/google/apis/analytics_v3/service.rb +82 -82
- data/generated/google/apis/analyticsreporting_v4.rb +1 -1
- data/generated/google/apis/analyticsreporting_v4/classes.rb +916 -916
- data/generated/google/apis/analyticsreporting_v4/representations.rb +167 -167
- data/generated/google/apis/analyticsreporting_v4/service.rb +7 -7
- data/generated/google/apis/androidenterprise_v1.rb +1 -1
- data/generated/google/apis/androidenterprise_v1/classes.rb +10 -10
- data/generated/google/apis/androidenterprise_v1/representations.rb +20 -20
- data/generated/google/apis/androidenterprise_v1/service.rb +43 -43
- data/generated/google/apis/androidpublisher_v2/classes.rb +26 -26
- data/generated/google/apis/androidpublisher_v2/representations.rb +46 -46
- data/generated/google/apis/androidpublisher_v2/service.rb +95 -95
- data/generated/google/apis/appengine_v1.rb +1 -1
- data/generated/google/apis/appengine_v1/classes.rb +825 -817
- data/generated/google/apis/appengine_v1/representations.rb +185 -184
- data/generated/google/apis/appengine_v1/service.rb +220 -216
- data/generated/google/apis/appstate_v1.rb +1 -1
- data/generated/google/apis/bigquery_v2.rb +1 -1
- data/generated/google/apis/bigquery_v2/classes.rb +9 -7
- data/generated/google/apis/bigquery_v2/representations.rb +8 -8
- data/generated/google/apis/bigquery_v2/service.rb +13 -13
- data/generated/google/apis/blogger_v3/service.rb +3 -3
- data/generated/google/apis/books_v1/classes.rb +55 -55
- data/generated/google/apis/books_v1/representations.rb +67 -67
- data/generated/google/apis/books_v1/service.rb +82 -82
- data/generated/google/apis/calendar_v3.rb +1 -1
- data/generated/google/apis/calendar_v3/classes.rb +6 -6
- data/generated/google/apis/calendar_v3/representations.rb +3 -3
- data/generated/google/apis/calendar_v3/service.rb +2 -2
- data/generated/google/apis/civicinfo_v2/classes.rb +1 -1
- data/generated/google/apis/civicinfo_v2/representations.rb +2 -2
- data/generated/google/apis/civicinfo_v2/service.rb +8 -8
- data/generated/google/apis/classroom_v1.rb +24 -24
- data/generated/google/apis/classroom_v1/classes.rb +381 -381
- data/generated/google/apis/classroom_v1/representations.rb +108 -108
- data/generated/google/apis/classroom_v1/service.rb +503 -503
- data/generated/google/apis/cloudbuild_v1.rb +1 -1
- data/generated/google/apis/cloudbuild_v1/classes.rb +219 -219
- data/generated/google/apis/cloudbuild_v1/representations.rb +62 -62
- data/generated/google/apis/cloudbuild_v1/service.rb +165 -165
- data/generated/google/apis/clouddebugger_v2.rb +1 -1
- data/generated/google/apis/clouddebugger_v2/classes.rb +133 -133
- data/generated/google/apis/clouddebugger_v2/representations.rb +29 -29
- data/generated/google/apis/clouddebugger_v2/service.rb +54 -54
- data/generated/google/apis/clouderrorreporting_v1beta1.rb +1 -1
- data/generated/google/apis/clouderrorreporting_v1beta1/classes.rb +177 -177
- data/generated/google/apis/clouderrorreporting_v1beta1/representations.rb +47 -47
- data/generated/google/apis/clouderrorreporting_v1beta1/service.rb +123 -123
- data/generated/google/apis/cloudfunctions_v1.rb +1 -1
- data/generated/google/apis/cloudfunctions_v1/service.rb +6 -6
- data/generated/google/apis/cloudkms_v1.rb +3 -3
- data/generated/google/apis/cloudkms_v1/classes.rb +229 -229
- data/generated/google/apis/cloudkms_v1/representations.rb +54 -54
- data/generated/google/apis/cloudkms_v1/service.rb +224 -224
- data/generated/google/apis/cloudresourcemanager_v1.rb +3 -3
- data/generated/google/apis/cloudresourcemanager_v1/classes.rb +1199 -1199
- data/generated/google/apis/cloudresourcemanager_v1/representations.rb +192 -192
- data/generated/google/apis/cloudresourcemanager_v1/service.rb +122 -122
- data/generated/google/apis/cloudresourcemanager_v1beta1/classes.rb +495 -495
- data/generated/google/apis/cloudresourcemanager_v1beta1/representations.rb +92 -92
- data/generated/google/apis/cloudresourcemanager_v1beta1/service.rb +320 -320
- data/generated/google/apis/cloudtrace_v1.rb +4 -4
- data/generated/google/apis/cloudtrace_v1/classes.rb +44 -44
- data/generated/google/apis/cloudtrace_v1/representations.rb +13 -13
- data/generated/google/apis/cloudtrace_v1/service.rb +28 -28
- data/generated/google/apis/compute_beta.rb +1 -1
- data/generated/google/apis/compute_beta/classes.rb +57 -15
- data/generated/google/apis/compute_beta/representations.rb +30 -14
- data/generated/google/apis/compute_beta/service.rb +52 -52
- data/generated/google/apis/compute_v1.rb +1 -1
- data/generated/google/apis/compute_v1/classes.rb +223 -10
- data/generated/google/apis/compute_v1/representations.rb +85 -16
- data/generated/google/apis/compute_v1/service.rb +327 -51
- data/generated/google/apis/container_v1/classes.rb +267 -267
- data/generated/google/apis/container_v1/representations.rb +61 -61
- data/generated/google/apis/container_v1/service.rb +123 -123
- data/generated/google/apis/content_v2.rb +1 -1
- data/generated/google/apis/content_v2/classes.rb +71 -71
- data/generated/google/apis/content_v2/representations.rb +105 -105
- data/generated/google/apis/content_v2/service.rb +120 -120
- data/generated/google/apis/dataflow_v1b3.rb +4 -4
- data/generated/google/apis/dataflow_v1b3/classes.rb +3442 -3452
- data/generated/google/apis/dataflow_v1b3/representations.rb +388 -389
- data/generated/google/apis/dataflow_v1b3/service.rb +265 -265
- data/generated/google/apis/dataproc_v1.rb +1 -1
- data/generated/google/apis/dataproc_v1/classes.rb +1059 -1059
- data/generated/google/apis/dataproc_v1/representations.rb +147 -147
- data/generated/google/apis/dataproc_v1/service.rb +309 -305
- data/generated/google/apis/datastore_v1.rb +1 -1
- data/generated/google/apis/datastore_v1/classes.rb +818 -818
- data/generated/google/apis/datastore_v1/representations.rb +151 -151
- data/generated/google/apis/datastore_v1/service.rb +62 -62
- data/generated/google/apis/deploymentmanager_v2/classes.rb +5 -5
- data/generated/google/apis/deploymentmanager_v2/representations.rb +10 -10
- data/generated/google/apis/deploymentmanager_v2/service.rb +20 -20
- data/generated/google/apis/discovery_v1/classes.rb +4 -4
- data/generated/google/apis/discovery_v1/representations.rb +2 -2
- data/generated/google/apis/discovery_v1/service.rb +1 -1
- data/generated/google/apis/dns_v1.rb +1 -1
- data/generated/google/apis/dns_v1/classes.rb +3 -3
- data/generated/google/apis/dns_v1/representations.rb +6 -6
- data/generated/google/apis/dns_v1/service.rb +12 -12
- data/generated/google/apis/dns_v2beta1.rb +1 -1
- data/generated/google/apis/doubleclickbidmanager_v1.rb +1 -1
- data/generated/google/apis/doubleclickbidmanager_v1/service.rb +8 -8
- data/generated/google/apis/doubleclicksearch_v2.rb +1 -1
- data/generated/google/apis/drive_v2/service.rb +1 -1
- data/generated/google/apis/drive_v3/service.rb +1 -1
- data/generated/google/apis/firebasedynamiclinks_v1.rb +1 -1
- data/generated/google/apis/firebasedynamiclinks_v1/classes.rb +188 -188
- data/generated/google/apis/firebasedynamiclinks_v1/representations.rb +62 -62
- data/generated/google/apis/firebasedynamiclinks_v1/service.rb +4 -4
- data/generated/google/apis/firebaserules_v1.rb +1 -1
- data/generated/google/apis/firebaserules_v1/classes.rb +403 -206
- data/generated/google/apis/firebaserules_v1/representations.rb +134 -54
- data/generated/google/apis/firebaserules_v1/service.rb +89 -89
- data/generated/google/apis/fusiontables_v2/service.rb +2 -2
- data/generated/google/apis/games_configuration_v1configuration.rb +1 -1
- data/generated/google/apis/games_configuration_v1configuration/classes.rb +2 -2
- data/generated/google/apis/games_configuration_v1configuration/representations.rb +4 -4
- data/generated/google/apis/games_configuration_v1configuration/service.rb +8 -8
- data/generated/google/apis/games_management_v1management.rb +1 -1
- data/generated/google/apis/games_v1.rb +1 -1
- data/generated/google/apis/games_v1/classes.rb +23 -23
- data/generated/google/apis/games_v1/representations.rb +43 -43
- data/generated/google/apis/games_v1/service.rb +72 -72
- data/generated/google/apis/genomics_v1.rb +7 -7
- data/generated/google/apis/genomics_v1/classes.rb +2296 -2297
- data/generated/google/apis/genomics_v1/representations.rb +298 -298
- data/generated/google/apis/genomics_v1/service.rb +1160 -1160
- data/generated/google/apis/groupssettings_v1/service.rb +0 -3
- data/generated/google/apis/iam_v1.rb +1 -1
- data/generated/google/apis/iam_v1/classes.rb +235 -235
- data/generated/google/apis/iam_v1/representations.rb +72 -72
- data/generated/google/apis/iam_v1/service.rb +189 -189
- data/generated/google/apis/identitytoolkit_v3/classes.rb +15 -15
- data/generated/google/apis/identitytoolkit_v3/representations.rb +30 -30
- data/generated/google/apis/identitytoolkit_v3/service.rb +64 -64
- data/generated/google/apis/kgsearch_v1/classes.rb +6 -6
- data/generated/google/apis/kgsearch_v1/representations.rb +1 -1
- data/generated/google/apis/kgsearch_v1/service.rb +10 -10
- data/generated/google/apis/language_v1/classes.rb +220 -220
- data/generated/google/apis/language_v1/representations.rb +81 -81
- data/generated/google/apis/language_v1/service.rb +43 -43
- data/generated/google/apis/language_v1beta1/classes.rb +448 -448
- data/generated/google/apis/language_v1beta1/representations.rb +106 -106
- data/generated/google/apis/language_v1beta1/service.rb +31 -31
- data/generated/google/apis/licensing_v1/service.rb +2 -2
- data/generated/google/apis/logging_v2/classes.rb +737 -737
- data/generated/google/apis/logging_v2/representations.rb +120 -120
- data/generated/google/apis/logging_v2/service.rb +479 -479
- data/generated/google/apis/logging_v2beta1/classes.rb +293 -293
- data/generated/google/apis/logging_v2beta1/representations.rb +54 -54
- data/generated/google/apis/logging_v2beta1/service.rb +349 -349
- data/generated/google/apis/manufacturers_v1/classes.rb +423 -423
- data/generated/google/apis/manufacturers_v1/representations.rb +61 -61
- data/generated/google/apis/manufacturers_v1/service.rb +8 -8
- data/generated/google/apis/mirror_v1/classes.rb +5 -5
- data/generated/google/apis/mirror_v1/representations.rb +10 -10
- data/generated/google/apis/mirror_v1/service.rb +20 -20
- data/generated/google/apis/ml_v1.rb +1 -1
- data/generated/google/apis/ml_v1/classes.rb +1285 -1205
- data/generated/google/apis/ml_v1/representations.rb +204 -174
- data/generated/google/apis/ml_v1/service.rb +150 -145
- data/generated/google/apis/monitoring_v3.rb +1 -1
- data/generated/google/apis/monitoring_v3/classes.rb +880 -880
- data/generated/google/apis/monitoring_v3/representations.rb +154 -154
- data/generated/google/apis/monitoring_v3/service.rb +299 -299
- data/generated/google/apis/mybusiness_v3/service.rb +5 -5
- data/generated/google/apis/oauth2_v2/service.rb +1 -1
- data/generated/google/apis/pagespeedonline_v2/classes.rb +11 -11
- data/generated/google/apis/pagespeedonline_v2/representations.rb +13 -13
- data/generated/google/apis/pagespeedonline_v2/service.rb +1 -1
- data/generated/google/apis/partners_v2.rb +1 -1
- data/generated/google/apis/partners_v2/classes.rb +524 -509
- data/generated/google/apis/partners_v2/representations.rb +115 -111
- data/generated/google/apis/partners_v2/service.rb +287 -287
- data/generated/google/apis/people_v1.rb +13 -13
- data/generated/google/apis/people_v1/classes.rb +1150 -1150
- data/generated/google/apis/people_v1/representations.rb +258 -258
- data/generated/google/apis/people_v1/service.rb +7 -7
- data/generated/google/apis/plus_domains_v1.rb +1 -1
- data/generated/google/apis/plus_domains_v1/service.rb +4 -4
- data/generated/google/apis/plus_v1.rb +1 -1
- data/generated/google/apis/plus_v1/service.rb +1 -1
- data/generated/google/apis/prediction_v1_6/service.rb +8 -8
- data/generated/google/apis/proximitybeacon_v1beta1/classes.rb +554 -554
- data/generated/google/apis/proximitybeacon_v1beta1/representations.rb +108 -108
- data/generated/google/apis/proximitybeacon_v1beta1/service.rb +224 -224
- data/generated/google/apis/pubsub_v1/classes.rb +228 -228
- data/generated/google/apis/pubsub_v1/representations.rb +69 -69
- data/generated/google/apis/pubsub_v1/service.rb +182 -182
- data/generated/google/apis/qpx_express_v1/classes.rb +2 -2
- data/generated/google/apis/qpx_express_v1/representations.rb +4 -4
- data/generated/google/apis/qpx_express_v1/service.rb +8 -8
- data/generated/google/apis/replicapool_v1beta2/classes.rb +5 -5
- data/generated/google/apis/replicapool_v1beta2/representations.rb +10 -10
- data/generated/google/apis/replicapool_v1beta2/service.rb +21 -21
- data/generated/google/apis/replicapoolupdater_v1beta1/service.rb +1 -1
- data/generated/google/apis/resourceviews_v1beta2/classes.rb +5 -5
- data/generated/google/apis/resourceviews_v1beta2/representations.rb +10 -10
- data/generated/google/apis/resourceviews_v1beta2/service.rb +20 -20
- data/generated/google/apis/runtimeconfig_v1.rb +3 -3
- data/generated/google/apis/runtimeconfig_v1/classes.rb +19 -19
- data/generated/google/apis/runtimeconfig_v1/representations.rb +10 -10
- data/generated/google/apis/runtimeconfig_v1/service.rb +4 -4
- data/generated/google/apis/script_v1.rb +9 -9
- data/generated/google/apis/script_v1/classes.rb +94 -94
- data/generated/google/apis/script_v1/representations.rb +26 -26
- data/generated/google/apis/searchconsole_v1.rb +1 -1
- data/generated/google/apis/searchconsole_v1/classes.rb +65 -65
- data/generated/google/apis/searchconsole_v1/representations.rb +27 -27
- data/generated/google/apis/searchconsole_v1/service.rb +6 -6
- data/generated/google/apis/servicecontrol_v1/classes.rb +1131 -1131
- data/generated/google/apis/servicecontrol_v1/representations.rb +195 -195
- data/generated/google/apis/servicecontrol_v1/service.rb +57 -57
- data/generated/google/apis/servicemanagement_v1.rb +7 -7
- data/generated/google/apis/servicemanagement_v1/classes.rb +3543 -3585
- data/generated/google/apis/servicemanagement_v1/representations.rb +556 -556
- data/generated/google/apis/servicemanagement_v1/service.rb +309 -309
- data/generated/google/apis/serviceuser_v1.rb +4 -4
- data/generated/google/apis/serviceuser_v1/classes.rb +2734 -2776
- data/generated/google/apis/serviceuser_v1/representations.rb +398 -398
- data/generated/google/apis/serviceuser_v1/service.rb +16 -16
- data/generated/google/apis/sheets_v4/classes.rb +1489 -1489
- data/generated/google/apis/sheets_v4/representations.rb +324 -324
- data/generated/google/apis/sheets_v4/service.rb +49 -49
- data/generated/google/apis/site_verification_v1/classes.rb +6 -6
- data/generated/google/apis/site_verification_v1/representations.rb +8 -8
- data/generated/google/apis/site_verification_v1/service.rb +12 -12
- data/generated/google/apis/slides_v1.rb +4 -4
- data/generated/google/apis/slides_v1/classes.rb +2907 -2907
- data/generated/google/apis/slides_v1/representations.rb +695 -695
- data/generated/google/apis/slides_v1/service.rb +40 -40
- data/generated/google/apis/sourcerepo_v1.rb +7 -1
- data/generated/google/apis/sourcerepo_v1/classes.rb +459 -452
- data/generated/google/apis/sourcerepo_v1/representations.rb +90 -89
- data/generated/google/apis/sourcerepo_v1/service.rb +101 -100
- data/generated/google/apis/spanner_v1/classes.rb +2557 -2557
- data/generated/google/apis/spanner_v1/representations.rb +205 -205
- data/generated/google/apis/spanner_v1/service.rb +525 -525
- data/generated/google/apis/speech_v1beta1.rb +1 -1
- data/generated/google/apis/speech_v1beta1/classes.rb +73 -73
- data/generated/google/apis/speech_v1beta1/representations.rb +25 -25
- data/generated/google/apis/speech_v1beta1/service.rb +33 -33
- data/generated/google/apis/sqladmin_v1beta4.rb +1 -1
- data/generated/google/apis/sqladmin_v1beta4/classes.rb +16 -15
- data/generated/google/apis/sqladmin_v1beta4/representations.rb +28 -28
- data/generated/google/apis/sqladmin_v1beta4/service.rb +58 -57
- data/generated/google/apis/storage_v1/classes.rb +6 -6
- data/generated/google/apis/storage_v1/representations.rb +4 -4
- data/generated/google/apis/storage_v1/service.rb +1 -1
- data/generated/google/apis/storagetransfer_v1.rb +1 -1
- data/generated/google/apis/storagetransfer_v1/classes.rb +357 -357
- data/generated/google/apis/storagetransfer_v1/representations.rb +87 -87
- data/generated/google/apis/storagetransfer_v1/service.rb +53 -48
- data/generated/google/apis/tagmanager_v1/service.rb +33 -33
- data/generated/google/apis/toolresults_v1beta3.rb +1 -1
- data/generated/google/apis/translate_v2.rb +1 -1
- data/generated/google/apis/translate_v2/classes.rb +46 -46
- data/generated/google/apis/translate_v2/representations.rb +22 -22
- data/generated/google/apis/translate_v2/service.rb +81 -74
- data/generated/google/apis/vision_v1/classes.rb +1290 -1290
- data/generated/google/apis/vision_v1/representations.rb +166 -166
- data/generated/google/apis/vision_v1/service.rb +6 -6
- data/generated/google/apis/webmasters_v3/classes.rb +4 -4
- data/generated/google/apis/webmasters_v3/representations.rb +8 -8
- data/generated/google/apis/webmasters_v3/service.rb +21 -21
- data/generated/google/apis/youtube_analytics_v1.rb +1 -1
- data/generated/google/apis/youtube_analytics_v1/classes.rb +2 -2
- data/generated/google/apis/youtube_analytics_v1/representations.rb +4 -4
- data/generated/google/apis/youtube_analytics_v1/service.rb +8 -8
- data/generated/google/apis/youtube_v3/classes.rb +20 -20
- data/generated/google/apis/youtube_v3/representations.rb +40 -40
- data/generated/google/apis/youtube_v3/service.rb +80 -80
- data/generated/google/apis/youtubereporting_v1.rb +1 -1
- data/generated/google/apis/youtubereporting_v1/classes.rb +127 -127
- data/generated/google/apis/youtubereporting_v1/representations.rb +36 -36
- data/generated/google/apis/youtubereporting_v1/service.rb +90 -90
- data/google-api-client.gemspec +3 -3
- data/lib/google/apis/core/base_service.rb +6 -0
- data/lib/google/apis/generator/annotator.rb +2 -2
- data/lib/google/apis/generator/model.rb +2 -2
- data/lib/google/apis/version.rb +1 -1
- metadata +11 -94
- data/dl.rb +0 -0
- data/generated/google/apis/adexchangebuyer_v1_3.rb +0 -35
- data/generated/google/apis/adexchangebuyer_v1_3/classes.rb +0 -1335
- data/generated/google/apis/adexchangebuyer_v1_3/representations.rb +0 -446
- data/generated/google/apis/adexchangebuyer_v1_3/service.rb +0 -872
- data/generated/google/apis/appengine_v1beta4.rb +0 -35
- data/generated/google/apis/appengine_v1beta4/classes.rb +0 -1585
- data/generated/google/apis/appengine_v1beta4/representations.rb +0 -542
- data/generated/google/apis/appengine_v1beta4/service.rb +0 -477
- data/generated/google/apis/appengine_v1beta5.rb +0 -40
- data/generated/google/apis/appengine_v1beta5/classes.rb +0 -2094
- data/generated/google/apis/appengine_v1beta5/representations.rb +0 -802
- data/generated/google/apis/appengine_v1beta5/service.rb +0 -867
- data/generated/google/apis/autoscaler_v1beta2.rb +0 -38
- data/generated/google/apis/autoscaler_v1beta2/classes.rb +0 -710
- data/generated/google/apis/autoscaler_v1beta2/representations.rb +0 -296
- data/generated/google/apis/autoscaler_v1beta2/service.rb +0 -478
- data/generated/google/apis/classroom_v1beta1.rb +0 -49
- data/generated/google/apis/classroom_v1beta1/classes.rb +0 -447
- data/generated/google/apis/classroom_v1beta1/representations.rb +0 -190
- data/generated/google/apis/classroom_v1beta1/service.rb +0 -791
- data/generated/google/apis/cloudkms_v1beta1.rb +0 -35
- data/generated/google/apis/cloudkms_v1beta1/classes.rb +0 -1039
- data/generated/google/apis/cloudkms_v1beta1/representations.rb +0 -448
- data/generated/google/apis/cloudkms_v1beta1/service.rb +0 -933
- data/generated/google/apis/cloudlatencytest_v2.rb +0 -34
- data/generated/google/apis/cloudlatencytest_v2/classes.rb +0 -195
- data/generated/google/apis/cloudlatencytest_v2/representations.rb +0 -127
- data/generated/google/apis/cloudlatencytest_v2/service.rb +0 -135
- data/generated/google/apis/container_v1beta1.rb +0 -35
- data/generated/google/apis/container_v1beta1/classes.rb +0 -466
- data/generated/google/apis/container_v1beta1/representations.rb +0 -177
- data/generated/google/apis/container_v1beta1/service.rb +0 -394
- data/generated/google/apis/coordinate_v1.rb +0 -37
- data/generated/google/apis/coordinate_v1/classes.rb +0 -669
- data/generated/google/apis/coordinate_v1/representations.rb +0 -321
- data/generated/google/apis/coordinate_v1/service.rb +0 -678
- data/generated/google/apis/datastore_v1beta2.rb +0 -40
- data/generated/google/apis/datastore_v1beta2/classes.rb +0 -1186
- data/generated/google/apis/datastore_v1beta2/representations.rb +0 -594
- data/generated/google/apis/datastore_v1beta2/service.rb +0 -294
- data/generated/google/apis/datastore_v1beta3.rb +0 -38
- data/generated/google/apis/datastore_v1beta3/classes.rb +0 -1284
- data/generated/google/apis/datastore_v1beta3/representations.rb +0 -572
- data/generated/google/apis/datastore_v1beta3/service.rb +0 -259
- data/generated/google/apis/deploymentmanager_v2beta2.rb +0 -44
- data/generated/google/apis/deploymentmanager_v2beta2/classes.rb +0 -843
- data/generated/google/apis/deploymentmanager_v2beta2/representations.rb +0 -306
- data/generated/google/apis/deploymentmanager_v2beta2/service.rb +0 -689
- data/generated/google/apis/dfareporting_v2_1.rb +0 -37
- data/generated/google/apis/dfareporting_v2_1/classes.rb +0 -10770
- data/generated/google/apis/dfareporting_v2_1/representations.rb +0 -3438
- data/generated/google/apis/dfareporting_v2_1/service.rb +0 -8585
- data/generated/google/apis/dfareporting_v2_3.rb +0 -37
- data/generated/google/apis/dfareporting_v2_3/classes.rb +0 -10839
- data/generated/google/apis/dfareporting_v2_3/representations.rb +0 -3829
- data/generated/google/apis/dfareporting_v2_3/service.rb +0 -8581
- data/generated/google/apis/dfareporting_v2_5.rb +0 -40
- data/generated/google/apis/dfareporting_v2_5/classes.rb +0 -11225
- data/generated/google/apis/dfareporting_v2_5/representations.rb +0 -3982
- data/generated/google/apis/dfareporting_v2_5/service.rb +0 -8755
- data/generated/google/apis/dfareporting_v2_6.rb +0 -40
- data/generated/google/apis/dfareporting_v2_6/classes.rb +0 -11599
- data/generated/google/apis/dfareporting_v2_6/representations.rb +0 -4119
- data/generated/google/apis/dfareporting_v2_6/service.rb +0 -9026
- data/generated/google/apis/gan_v1beta1.rb +0 -31
- data/generated/google/apis/gan_v1beta1/classes.rb +0 -1428
- data/generated/google/apis/gan_v1beta1/representations.rb +0 -462
- data/generated/google/apis/gan_v1beta1/service.rb +0 -682
- data/generated/google/apis/genomics_v1beta2.rb +0 -46
- data/generated/google/apis/genomics_v1beta2/classes.rb +0 -3288
- data/generated/google/apis/genomics_v1beta2/representations.rb +0 -1194
- data/generated/google/apis/genomics_v1beta2/service.rb +0 -2392
- data/generated/google/apis/logging_v1beta3.rb +0 -47
- data/generated/google/apis/logging_v1beta3/classes.rb +0 -1079
- data/generated/google/apis/logging_v1beta3/representations.rb +0 -366
- data/generated/google/apis/logging_v1beta3/service.rb +0 -1001
- data/generated/google/apis/manager_v1beta2.rb +0 -53
- data/generated/google/apis/manager_v1beta2/classes.rb +0 -1287
- data/generated/google/apis/manager_v1beta2/representations.rb +0 -606
- data/generated/google/apis/manager_v1beta2/service.rb +0 -372
- data/generated/google/apis/pubsub_v1beta2.rb +0 -37
- data/generated/google/apis/pubsub_v1beta2/classes.rb +0 -620
- data/generated/google/apis/pubsub_v1beta2/representations.rb +0 -282
- data/generated/google/apis/pubsub_v1beta2/service.rb +0 -774
- data/generated/google/apis/tracing_v1.rb +0 -40
- data/generated/google/apis/tracing_v1/classes.rb +0 -664
- data/generated/google/apis/tracing_v1/representations.rb +0 -279
- data/generated/google/apis/tracing_v1/service.rb +0 -226
@@ -1,2392 +0,0 @@
|
|
1
|
-
# Copyright 2015 Google Inc.
|
2
|
-
#
|
3
|
-
# Licensed under the Apache License, Version 2.0 (the "License");
|
4
|
-
# you may not use this file except in compliance with the License.
|
5
|
-
# You may obtain a copy of the License at
|
6
|
-
#
|
7
|
-
# http://www.apache.org/licenses/LICENSE-2.0
|
8
|
-
#
|
9
|
-
# Unless required by applicable law or agreed to in writing, software
|
10
|
-
# distributed under the License is distributed on an "AS IS" BASIS,
|
11
|
-
# WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
|
12
|
-
# See the License for the specific language governing permissions and
|
13
|
-
# limitations under the License.
|
14
|
-
|
15
|
-
require 'google/apis/core/base_service'
|
16
|
-
require 'google/apis/core/json_representation'
|
17
|
-
require 'google/apis/core/hashable'
|
18
|
-
require 'google/apis/errors'
|
19
|
-
|
20
|
-
module Google
|
21
|
-
module Apis
|
22
|
-
module GenomicsV1beta2
|
23
|
-
# Genomics API
|
24
|
-
#
|
25
|
-
# Provides access to Genomics data.
|
26
|
-
#
|
27
|
-
# @example
|
28
|
-
# require 'google/apis/genomics_v1beta2'
|
29
|
-
#
|
30
|
-
# Genomics = Google::Apis::GenomicsV1beta2 # Alias the module
|
31
|
-
# service = Genomics::GenomicsService.new
|
32
|
-
#
|
33
|
-
# @see https://developers.google.com/genomics/v1beta2/reference
|
34
|
-
class GenomicsService < Google::Apis::Core::BaseService
|
35
|
-
# @return [String]
|
36
|
-
# API key. Your API key identifies your project and provides you with API access,
|
37
|
-
# quota, and reports. Required unless you provide an OAuth 2.0 token.
|
38
|
-
attr_accessor :key
|
39
|
-
|
40
|
-
# @return [String]
|
41
|
-
# Available to use for quota purposes for server-side applications. Can be any
|
42
|
-
# arbitrary string assigned to a user, but should not exceed 40 characters.
|
43
|
-
# Overrides userIp if both are provided.
|
44
|
-
attr_accessor :quota_user
|
45
|
-
|
46
|
-
# @return [String]
|
47
|
-
# IP address of the site where the request originates. Use this if you want to
|
48
|
-
# enforce per-user limits.
|
49
|
-
attr_accessor :user_ip
|
50
|
-
|
51
|
-
def initialize
|
52
|
-
super('https://www.googleapis.com/', 'genomics/v1beta2/')
|
53
|
-
end
|
54
|
-
|
55
|
-
# Creates a new annotation set. Caller must have WRITE permission for the
|
56
|
-
# associated dataset.
|
57
|
-
# @param [Google::Apis::GenomicsV1beta2::AnnotationSet] annotation_set_object
|
58
|
-
# @param [String] fields
|
59
|
-
# Selector specifying which fields to include in a partial response.
|
60
|
-
# @param [String] quota_user
|
61
|
-
# Available to use for quota purposes for server-side applications. Can be any
|
62
|
-
# arbitrary string assigned to a user, but should not exceed 40 characters.
|
63
|
-
# Overrides userIp if both are provided.
|
64
|
-
# @param [String] user_ip
|
65
|
-
# IP address of the site where the request originates. Use this if you want to
|
66
|
-
# enforce per-user limits.
|
67
|
-
# @param [Google::Apis::RequestOptions] options
|
68
|
-
# Request-specific options
|
69
|
-
#
|
70
|
-
# @yield [result, err] Result & error if block supplied
|
71
|
-
# @yieldparam result [Google::Apis::GenomicsV1beta2::AnnotationSet] parsed result object
|
72
|
-
# @yieldparam err [StandardError] error object if request failed
|
73
|
-
#
|
74
|
-
# @return [Google::Apis::GenomicsV1beta2::AnnotationSet]
|
75
|
-
#
|
76
|
-
# @raise [Google::Apis::ServerError] An error occurred on the server and the request can be retried
|
77
|
-
# @raise [Google::Apis::ClientError] The request is invalid and should not be retried without modification
|
78
|
-
# @raise [Google::Apis::AuthorizationError] Authorization is required
|
79
|
-
def create_annotation_set(annotation_set_object = nil, fields: nil, quota_user: nil, user_ip: nil, options: nil, &block)
|
80
|
-
path = 'annotationSets'
|
81
|
-
command = make_simple_command(:post, path, options)
|
82
|
-
command.request_representation = Google::Apis::GenomicsV1beta2::AnnotationSet::Representation
|
83
|
-
command.request_object = annotation_set_object
|
84
|
-
command.response_representation = Google::Apis::GenomicsV1beta2::AnnotationSet::Representation
|
85
|
-
command.response_class = Google::Apis::GenomicsV1beta2::AnnotationSet
|
86
|
-
command.query['fields'] = fields unless fields.nil?
|
87
|
-
command.query['quotaUser'] = quota_user unless quota_user.nil?
|
88
|
-
command.query['userIp'] = user_ip unless user_ip.nil?
|
89
|
-
execute_or_queue_command(command, &block)
|
90
|
-
end
|
91
|
-
|
92
|
-
# Deletes an annotation set. Caller must have WRITE permission for the
|
93
|
-
# associated annotation set.
|
94
|
-
# @param [String] annotation_set_id
|
95
|
-
# The ID of the annotation set to be deleted.
|
96
|
-
# @param [String] fields
|
97
|
-
# Selector specifying which fields to include in a partial response.
|
98
|
-
# @param [String] quota_user
|
99
|
-
# Available to use for quota purposes for server-side applications. Can be any
|
100
|
-
# arbitrary string assigned to a user, but should not exceed 40 characters.
|
101
|
-
# Overrides userIp if both are provided.
|
102
|
-
# @param [String] user_ip
|
103
|
-
# IP address of the site where the request originates. Use this if you want to
|
104
|
-
# enforce per-user limits.
|
105
|
-
# @param [Google::Apis::RequestOptions] options
|
106
|
-
# Request-specific options
|
107
|
-
#
|
108
|
-
# @yield [result, err] Result & error if block supplied
|
109
|
-
# @yieldparam result [NilClass] No result returned for this method
|
110
|
-
# @yieldparam err [StandardError] error object if request failed
|
111
|
-
#
|
112
|
-
# @return [void]
|
113
|
-
#
|
114
|
-
# @raise [Google::Apis::ServerError] An error occurred on the server and the request can be retried
|
115
|
-
# @raise [Google::Apis::ClientError] The request is invalid and should not be retried without modification
|
116
|
-
# @raise [Google::Apis::AuthorizationError] Authorization is required
|
117
|
-
def delete_annotation_set(annotation_set_id, fields: nil, quota_user: nil, user_ip: nil, options: nil, &block)
|
118
|
-
path = 'annotationSets/{annotationSetId}'
|
119
|
-
command = make_simple_command(:delete, path, options)
|
120
|
-
command.params['annotationSetId'] = annotation_set_id unless annotation_set_id.nil?
|
121
|
-
command.query['fields'] = fields unless fields.nil?
|
122
|
-
command.query['quotaUser'] = quota_user unless quota_user.nil?
|
123
|
-
command.query['userIp'] = user_ip unless user_ip.nil?
|
124
|
-
execute_or_queue_command(command, &block)
|
125
|
-
end
|
126
|
-
|
127
|
-
# Gets an annotation set. Caller must have READ permission for the associated
|
128
|
-
# dataset.
|
129
|
-
# @param [String] annotation_set_id
|
130
|
-
# The ID of the annotation set to be retrieved.
|
131
|
-
# @param [String] fields
|
132
|
-
# Selector specifying which fields to include in a partial response.
|
133
|
-
# @param [String] quota_user
|
134
|
-
# Available to use for quota purposes for server-side applications. Can be any
|
135
|
-
# arbitrary string assigned to a user, but should not exceed 40 characters.
|
136
|
-
# Overrides userIp if both are provided.
|
137
|
-
# @param [String] user_ip
|
138
|
-
# IP address of the site where the request originates. Use this if you want to
|
139
|
-
# enforce per-user limits.
|
140
|
-
# @param [Google::Apis::RequestOptions] options
|
141
|
-
# Request-specific options
|
142
|
-
#
|
143
|
-
# @yield [result, err] Result & error if block supplied
|
144
|
-
# @yieldparam result [Google::Apis::GenomicsV1beta2::AnnotationSet] parsed result object
|
145
|
-
# @yieldparam err [StandardError] error object if request failed
|
146
|
-
#
|
147
|
-
# @return [Google::Apis::GenomicsV1beta2::AnnotationSet]
|
148
|
-
#
|
149
|
-
# @raise [Google::Apis::ServerError] An error occurred on the server and the request can be retried
|
150
|
-
# @raise [Google::Apis::ClientError] The request is invalid and should not be retried without modification
|
151
|
-
# @raise [Google::Apis::AuthorizationError] Authorization is required
|
152
|
-
def get_annotation_set(annotation_set_id, fields: nil, quota_user: nil, user_ip: nil, options: nil, &block)
|
153
|
-
path = 'annotationSets/{annotationSetId}'
|
154
|
-
command = make_simple_command(:get, path, options)
|
155
|
-
command.response_representation = Google::Apis::GenomicsV1beta2::AnnotationSet::Representation
|
156
|
-
command.response_class = Google::Apis::GenomicsV1beta2::AnnotationSet
|
157
|
-
command.params['annotationSetId'] = annotation_set_id unless annotation_set_id.nil?
|
158
|
-
command.query['fields'] = fields unless fields.nil?
|
159
|
-
command.query['quotaUser'] = quota_user unless quota_user.nil?
|
160
|
-
command.query['userIp'] = user_ip unless user_ip.nil?
|
161
|
-
execute_or_queue_command(command, &block)
|
162
|
-
end
|
163
|
-
|
164
|
-
# Updates an annotation set. The update must respect all mutability restrictions
|
165
|
-
# and other invariants described on the annotation set resource. Caller must
|
166
|
-
# have WRITE permission for the associated dataset. This method supports patch
|
167
|
-
# semantics.
|
168
|
-
# @param [String] annotation_set_id
|
169
|
-
# The ID of the annotation set to be updated.
|
170
|
-
# @param [Google::Apis::GenomicsV1beta2::AnnotationSet] annotation_set_object
|
171
|
-
# @param [String] fields
|
172
|
-
# Selector specifying which fields to include in a partial response.
|
173
|
-
# @param [String] quota_user
|
174
|
-
# Available to use for quota purposes for server-side applications. Can be any
|
175
|
-
# arbitrary string assigned to a user, but should not exceed 40 characters.
|
176
|
-
# Overrides userIp if both are provided.
|
177
|
-
# @param [String] user_ip
|
178
|
-
# IP address of the site where the request originates. Use this if you want to
|
179
|
-
# enforce per-user limits.
|
180
|
-
# @param [Google::Apis::RequestOptions] options
|
181
|
-
# Request-specific options
|
182
|
-
#
|
183
|
-
# @yield [result, err] Result & error if block supplied
|
184
|
-
# @yieldparam result [Google::Apis::GenomicsV1beta2::AnnotationSet] parsed result object
|
185
|
-
# @yieldparam err [StandardError] error object if request failed
|
186
|
-
#
|
187
|
-
# @return [Google::Apis::GenomicsV1beta2::AnnotationSet]
|
188
|
-
#
|
189
|
-
# @raise [Google::Apis::ServerError] An error occurred on the server and the request can be retried
|
190
|
-
# @raise [Google::Apis::ClientError] The request is invalid and should not be retried without modification
|
191
|
-
# @raise [Google::Apis::AuthorizationError] Authorization is required
|
192
|
-
def patch_annotation_set(annotation_set_id, annotation_set_object = nil, fields: nil, quota_user: nil, user_ip: nil, options: nil, &block)
|
193
|
-
path = 'annotationSets/{annotationSetId}'
|
194
|
-
command = make_simple_command(:patch, path, options)
|
195
|
-
command.request_representation = Google::Apis::GenomicsV1beta2::AnnotationSet::Representation
|
196
|
-
command.request_object = annotation_set_object
|
197
|
-
command.response_representation = Google::Apis::GenomicsV1beta2::AnnotationSet::Representation
|
198
|
-
command.response_class = Google::Apis::GenomicsV1beta2::AnnotationSet
|
199
|
-
command.params['annotationSetId'] = annotation_set_id unless annotation_set_id.nil?
|
200
|
-
command.query['fields'] = fields unless fields.nil?
|
201
|
-
command.query['quotaUser'] = quota_user unless quota_user.nil?
|
202
|
-
command.query['userIp'] = user_ip unless user_ip.nil?
|
203
|
-
execute_or_queue_command(command, &block)
|
204
|
-
end
|
205
|
-
|
206
|
-
# Searches for annotation sets that match the given criteria. Results are
|
207
|
-
# returned in a deterministic order. Caller must have READ permission for the
|
208
|
-
# queried datasets.
|
209
|
-
# @param [Google::Apis::GenomicsV1beta2::SearchAnnotationSetsRequest] search_annotation_sets_request_object
|
210
|
-
# @param [String] fields
|
211
|
-
# Selector specifying which fields to include in a partial response.
|
212
|
-
# @param [String] quota_user
|
213
|
-
# Available to use for quota purposes for server-side applications. Can be any
|
214
|
-
# arbitrary string assigned to a user, but should not exceed 40 characters.
|
215
|
-
# Overrides userIp if both are provided.
|
216
|
-
# @param [String] user_ip
|
217
|
-
# IP address of the site where the request originates. Use this if you want to
|
218
|
-
# enforce per-user limits.
|
219
|
-
# @param [Google::Apis::RequestOptions] options
|
220
|
-
# Request-specific options
|
221
|
-
#
|
222
|
-
# @yield [result, err] Result & error if block supplied
|
223
|
-
# @yieldparam result [Google::Apis::GenomicsV1beta2::SearchAnnotationSetsResponse] parsed result object
|
224
|
-
# @yieldparam err [StandardError] error object if request failed
|
225
|
-
#
|
226
|
-
# @return [Google::Apis::GenomicsV1beta2::SearchAnnotationSetsResponse]
|
227
|
-
#
|
228
|
-
# @raise [Google::Apis::ServerError] An error occurred on the server and the request can be retried
|
229
|
-
# @raise [Google::Apis::ClientError] The request is invalid and should not be retried without modification
|
230
|
-
# @raise [Google::Apis::AuthorizationError] Authorization is required
|
231
|
-
def search_annotation_sets(search_annotation_sets_request_object = nil, fields: nil, quota_user: nil, user_ip: nil, options: nil, &block)
|
232
|
-
path = 'annotationSets/search'
|
233
|
-
command = make_simple_command(:post, path, options)
|
234
|
-
command.request_representation = Google::Apis::GenomicsV1beta2::SearchAnnotationSetsRequest::Representation
|
235
|
-
command.request_object = search_annotation_sets_request_object
|
236
|
-
command.response_representation = Google::Apis::GenomicsV1beta2::SearchAnnotationSetsResponse::Representation
|
237
|
-
command.response_class = Google::Apis::GenomicsV1beta2::SearchAnnotationSetsResponse
|
238
|
-
command.query['fields'] = fields unless fields.nil?
|
239
|
-
command.query['quotaUser'] = quota_user unless quota_user.nil?
|
240
|
-
command.query['userIp'] = user_ip unless user_ip.nil?
|
241
|
-
execute_or_queue_command(command, &block)
|
242
|
-
end
|
243
|
-
|
244
|
-
# Updates an annotation set. The update must respect all mutability restrictions
|
245
|
-
# and other invariants described on the annotation set resource. Caller must
|
246
|
-
# have WRITE permission for the associated dataset.
|
247
|
-
# @param [String] annotation_set_id
|
248
|
-
# The ID of the annotation set to be updated.
|
249
|
-
# @param [Google::Apis::GenomicsV1beta2::AnnotationSet] annotation_set_object
|
250
|
-
# @param [String] fields
|
251
|
-
# Selector specifying which fields to include in a partial response.
|
252
|
-
# @param [String] quota_user
|
253
|
-
# Available to use for quota purposes for server-side applications. Can be any
|
254
|
-
# arbitrary string assigned to a user, but should not exceed 40 characters.
|
255
|
-
# Overrides userIp if both are provided.
|
256
|
-
# @param [String] user_ip
|
257
|
-
# IP address of the site where the request originates. Use this if you want to
|
258
|
-
# enforce per-user limits.
|
259
|
-
# @param [Google::Apis::RequestOptions] options
|
260
|
-
# Request-specific options
|
261
|
-
#
|
262
|
-
# @yield [result, err] Result & error if block supplied
|
263
|
-
# @yieldparam result [Google::Apis::GenomicsV1beta2::AnnotationSet] parsed result object
|
264
|
-
# @yieldparam err [StandardError] error object if request failed
|
265
|
-
#
|
266
|
-
# @return [Google::Apis::GenomicsV1beta2::AnnotationSet]
|
267
|
-
#
|
268
|
-
# @raise [Google::Apis::ServerError] An error occurred on the server and the request can be retried
|
269
|
-
# @raise [Google::Apis::ClientError] The request is invalid and should not be retried without modification
|
270
|
-
# @raise [Google::Apis::AuthorizationError] Authorization is required
|
271
|
-
def update_annotation_set(annotation_set_id, annotation_set_object = nil, fields: nil, quota_user: nil, user_ip: nil, options: nil, &block)
|
272
|
-
path = 'annotationSets/{annotationSetId}'
|
273
|
-
command = make_simple_command(:put, path, options)
|
274
|
-
command.request_representation = Google::Apis::GenomicsV1beta2::AnnotationSet::Representation
|
275
|
-
command.request_object = annotation_set_object
|
276
|
-
command.response_representation = Google::Apis::GenomicsV1beta2::AnnotationSet::Representation
|
277
|
-
command.response_class = Google::Apis::GenomicsV1beta2::AnnotationSet
|
278
|
-
command.params['annotationSetId'] = annotation_set_id unless annotation_set_id.nil?
|
279
|
-
command.query['fields'] = fields unless fields.nil?
|
280
|
-
command.query['quotaUser'] = quota_user unless quota_user.nil?
|
281
|
-
command.query['userIp'] = user_ip unless user_ip.nil?
|
282
|
-
execute_or_queue_command(command, &block)
|
283
|
-
end
|
284
|
-
|
285
|
-
# Creates one or more new annotations atomically. All annotations must belong to
|
286
|
-
# the same annotation set. Caller must have WRITE permission for this annotation
|
287
|
-
# set. For optimal performance, batch positionally adjacent annotations together.
|
288
|
-
# If the request has a systemic issue, such as an attempt to write to an
|
289
|
-
# inaccessible annotation set, the entire RPC will fail accordingly. For lesser
|
290
|
-
# data issues, when possible an error will be isolated to the corresponding
|
291
|
-
# batch entry in the response; the remaining well formed annotations will be
|
292
|
-
# created normally.
|
293
|
-
# @param [Google::Apis::GenomicsV1beta2::BatchCreateAnnotationsRequest] batch_create_annotations_request_object
|
294
|
-
# @param [String] fields
|
295
|
-
# Selector specifying which fields to include in a partial response.
|
296
|
-
# @param [String] quota_user
|
297
|
-
# Available to use for quota purposes for server-side applications. Can be any
|
298
|
-
# arbitrary string assigned to a user, but should not exceed 40 characters.
|
299
|
-
# Overrides userIp if both are provided.
|
300
|
-
# @param [String] user_ip
|
301
|
-
# IP address of the site where the request originates. Use this if you want to
|
302
|
-
# enforce per-user limits.
|
303
|
-
# @param [Google::Apis::RequestOptions] options
|
304
|
-
# Request-specific options
|
305
|
-
#
|
306
|
-
# @yield [result, err] Result & error if block supplied
|
307
|
-
# @yieldparam result [Google::Apis::GenomicsV1beta2::BatchAnnotationsResponse] parsed result object
|
308
|
-
# @yieldparam err [StandardError] error object if request failed
|
309
|
-
#
|
310
|
-
# @return [Google::Apis::GenomicsV1beta2::BatchAnnotationsResponse]
|
311
|
-
#
|
312
|
-
# @raise [Google::Apis::ServerError] An error occurred on the server and the request can be retried
|
313
|
-
# @raise [Google::Apis::ClientError] The request is invalid and should not be retried without modification
|
314
|
-
# @raise [Google::Apis::AuthorizationError] Authorization is required
|
315
|
-
def batch_create_annotations(batch_create_annotations_request_object = nil, fields: nil, quota_user: nil, user_ip: nil, options: nil, &block)
|
316
|
-
path = 'annotations:batchCreate'
|
317
|
-
command = make_simple_command(:post, path, options)
|
318
|
-
command.request_representation = Google::Apis::GenomicsV1beta2::BatchCreateAnnotationsRequest::Representation
|
319
|
-
command.request_object = batch_create_annotations_request_object
|
320
|
-
command.response_representation = Google::Apis::GenomicsV1beta2::BatchAnnotationsResponse::Representation
|
321
|
-
command.response_class = Google::Apis::GenomicsV1beta2::BatchAnnotationsResponse
|
322
|
-
command.query['fields'] = fields unless fields.nil?
|
323
|
-
command.query['quotaUser'] = quota_user unless quota_user.nil?
|
324
|
-
command.query['userIp'] = user_ip unless user_ip.nil?
|
325
|
-
execute_or_queue_command(command, &block)
|
326
|
-
end
|
327
|
-
|
328
|
-
# Creates a new annotation. Caller must have WRITE permission for the associated
|
329
|
-
# annotation set.
|
330
|
-
# @param [Google::Apis::GenomicsV1beta2::Annotation] annotation_object
|
331
|
-
# @param [String] fields
|
332
|
-
# Selector specifying which fields to include in a partial response.
|
333
|
-
# @param [String] quota_user
|
334
|
-
# Available to use for quota purposes for server-side applications. Can be any
|
335
|
-
# arbitrary string assigned to a user, but should not exceed 40 characters.
|
336
|
-
# Overrides userIp if both are provided.
|
337
|
-
# @param [String] user_ip
|
338
|
-
# IP address of the site where the request originates. Use this if you want to
|
339
|
-
# enforce per-user limits.
|
340
|
-
# @param [Google::Apis::RequestOptions] options
|
341
|
-
# Request-specific options
|
342
|
-
#
|
343
|
-
# @yield [result, err] Result & error if block supplied
|
344
|
-
# @yieldparam result [Google::Apis::GenomicsV1beta2::Annotation] parsed result object
|
345
|
-
# @yieldparam err [StandardError] error object if request failed
|
346
|
-
#
|
347
|
-
# @return [Google::Apis::GenomicsV1beta2::Annotation]
|
348
|
-
#
|
349
|
-
# @raise [Google::Apis::ServerError] An error occurred on the server and the request can be retried
|
350
|
-
# @raise [Google::Apis::ClientError] The request is invalid and should not be retried without modification
|
351
|
-
# @raise [Google::Apis::AuthorizationError] Authorization is required
|
352
|
-
def create_annotation(annotation_object = nil, fields: nil, quota_user: nil, user_ip: nil, options: nil, &block)
|
353
|
-
path = 'annotations'
|
354
|
-
command = make_simple_command(:post, path, options)
|
355
|
-
command.request_representation = Google::Apis::GenomicsV1beta2::Annotation::Representation
|
356
|
-
command.request_object = annotation_object
|
357
|
-
command.response_representation = Google::Apis::GenomicsV1beta2::Annotation::Representation
|
358
|
-
command.response_class = Google::Apis::GenomicsV1beta2::Annotation
|
359
|
-
command.query['fields'] = fields unless fields.nil?
|
360
|
-
command.query['quotaUser'] = quota_user unless quota_user.nil?
|
361
|
-
command.query['userIp'] = user_ip unless user_ip.nil?
|
362
|
-
execute_or_queue_command(command, &block)
|
363
|
-
end
|
364
|
-
|
365
|
-
# Deletes an annotation. Caller must have WRITE permission for the associated
|
366
|
-
# annotation set.
|
367
|
-
# @param [String] annotation_id
|
368
|
-
# The ID of the annotation set to be deleted.
|
369
|
-
# @param [String] fields
|
370
|
-
# Selector specifying which fields to include in a partial response.
|
371
|
-
# @param [String] quota_user
|
372
|
-
# Available to use for quota purposes for server-side applications. Can be any
|
373
|
-
# arbitrary string assigned to a user, but should not exceed 40 characters.
|
374
|
-
# Overrides userIp if both are provided.
|
375
|
-
# @param [String] user_ip
|
376
|
-
# IP address of the site where the request originates. Use this if you want to
|
377
|
-
# enforce per-user limits.
|
378
|
-
# @param [Google::Apis::RequestOptions] options
|
379
|
-
# Request-specific options
|
380
|
-
#
|
381
|
-
# @yield [result, err] Result & error if block supplied
|
382
|
-
# @yieldparam result [NilClass] No result returned for this method
|
383
|
-
# @yieldparam err [StandardError] error object if request failed
|
384
|
-
#
|
385
|
-
# @return [void]
|
386
|
-
#
|
387
|
-
# @raise [Google::Apis::ServerError] An error occurred on the server and the request can be retried
|
388
|
-
# @raise [Google::Apis::ClientError] The request is invalid and should not be retried without modification
|
389
|
-
# @raise [Google::Apis::AuthorizationError] Authorization is required
|
390
|
-
def delete_annotation(annotation_id, fields: nil, quota_user: nil, user_ip: nil, options: nil, &block)
|
391
|
-
path = 'annotations/{annotationId}'
|
392
|
-
command = make_simple_command(:delete, path, options)
|
393
|
-
command.params['annotationId'] = annotation_id unless annotation_id.nil?
|
394
|
-
command.query['fields'] = fields unless fields.nil?
|
395
|
-
command.query['quotaUser'] = quota_user unless quota_user.nil?
|
396
|
-
command.query['userIp'] = user_ip unless user_ip.nil?
|
397
|
-
execute_or_queue_command(command, &block)
|
398
|
-
end
|
399
|
-
|
400
|
-
# Gets an annotation. Caller must have READ permission for the associated
|
401
|
-
# annotation set.
|
402
|
-
# @param [String] annotation_id
|
403
|
-
# The ID of the annotation set to be retrieved.
|
404
|
-
# @param [String] fields
|
405
|
-
# Selector specifying which fields to include in a partial response.
|
406
|
-
# @param [String] quota_user
|
407
|
-
# Available to use for quota purposes for server-side applications. Can be any
|
408
|
-
# arbitrary string assigned to a user, but should not exceed 40 characters.
|
409
|
-
# Overrides userIp if both are provided.
|
410
|
-
# @param [String] user_ip
|
411
|
-
# IP address of the site where the request originates. Use this if you want to
|
412
|
-
# enforce per-user limits.
|
413
|
-
# @param [Google::Apis::RequestOptions] options
|
414
|
-
# Request-specific options
|
415
|
-
#
|
416
|
-
# @yield [result, err] Result & error if block supplied
|
417
|
-
# @yieldparam result [Google::Apis::GenomicsV1beta2::Annotation] parsed result object
|
418
|
-
# @yieldparam err [StandardError] error object if request failed
|
419
|
-
#
|
420
|
-
# @return [Google::Apis::GenomicsV1beta2::Annotation]
|
421
|
-
#
|
422
|
-
# @raise [Google::Apis::ServerError] An error occurred on the server and the request can be retried
|
423
|
-
# @raise [Google::Apis::ClientError] The request is invalid and should not be retried without modification
|
424
|
-
# @raise [Google::Apis::AuthorizationError] Authorization is required
|
425
|
-
def get_annotation(annotation_id, fields: nil, quota_user: nil, user_ip: nil, options: nil, &block)
|
426
|
-
path = 'annotations/{annotationId}'
|
427
|
-
command = make_simple_command(:get, path, options)
|
428
|
-
command.response_representation = Google::Apis::GenomicsV1beta2::Annotation::Representation
|
429
|
-
command.response_class = Google::Apis::GenomicsV1beta2::Annotation
|
430
|
-
command.params['annotationId'] = annotation_id unless annotation_id.nil?
|
431
|
-
command.query['fields'] = fields unless fields.nil?
|
432
|
-
command.query['quotaUser'] = quota_user unless quota_user.nil?
|
433
|
-
command.query['userIp'] = user_ip unless user_ip.nil?
|
434
|
-
execute_or_queue_command(command, &block)
|
435
|
-
end
|
436
|
-
|
437
|
-
# Updates an annotation. The update must respect all mutability restrictions and
|
438
|
-
# other invariants described on the annotation resource. Caller must have WRITE
|
439
|
-
# permission for the associated dataset. This method supports patch semantics.
|
440
|
-
# @param [String] annotation_id
|
441
|
-
# The ID of the annotation set to be updated.
|
442
|
-
# @param [Google::Apis::GenomicsV1beta2::Annotation] annotation_object
|
443
|
-
# @param [String] fields
|
444
|
-
# Selector specifying which fields to include in a partial response.
|
445
|
-
# @param [String] quota_user
|
446
|
-
# Available to use for quota purposes for server-side applications. Can be any
|
447
|
-
# arbitrary string assigned to a user, but should not exceed 40 characters.
|
448
|
-
# Overrides userIp if both are provided.
|
449
|
-
# @param [String] user_ip
|
450
|
-
# IP address of the site where the request originates. Use this if you want to
|
451
|
-
# enforce per-user limits.
|
452
|
-
# @param [Google::Apis::RequestOptions] options
|
453
|
-
# Request-specific options
|
454
|
-
#
|
455
|
-
# @yield [result, err] Result & error if block supplied
|
456
|
-
# @yieldparam result [Google::Apis::GenomicsV1beta2::Annotation] parsed result object
|
457
|
-
# @yieldparam err [StandardError] error object if request failed
|
458
|
-
#
|
459
|
-
# @return [Google::Apis::GenomicsV1beta2::Annotation]
|
460
|
-
#
|
461
|
-
# @raise [Google::Apis::ServerError] An error occurred on the server and the request can be retried
|
462
|
-
# @raise [Google::Apis::ClientError] The request is invalid and should not be retried without modification
|
463
|
-
# @raise [Google::Apis::AuthorizationError] Authorization is required
|
464
|
-
def patch_annotation(annotation_id, annotation_object = nil, fields: nil, quota_user: nil, user_ip: nil, options: nil, &block)
|
465
|
-
path = 'annotations/{annotationId}'
|
466
|
-
command = make_simple_command(:patch, path, options)
|
467
|
-
command.request_representation = Google::Apis::GenomicsV1beta2::Annotation::Representation
|
468
|
-
command.request_object = annotation_object
|
469
|
-
command.response_representation = Google::Apis::GenomicsV1beta2::Annotation::Representation
|
470
|
-
command.response_class = Google::Apis::GenomicsV1beta2::Annotation
|
471
|
-
command.params['annotationId'] = annotation_id unless annotation_id.nil?
|
472
|
-
command.query['fields'] = fields unless fields.nil?
|
473
|
-
command.query['quotaUser'] = quota_user unless quota_user.nil?
|
474
|
-
command.query['userIp'] = user_ip unless user_ip.nil?
|
475
|
-
execute_or_queue_command(command, &block)
|
476
|
-
end
|
477
|
-
|
478
|
-
# Searches for annotations that match the given criteria. Results are returned
|
479
|
-
# ordered by start position. Annotations that have matching start positions are
|
480
|
-
# ordered deterministically. Caller must have READ permission for the queried
|
481
|
-
# annotation sets.
|
482
|
-
# @param [Google::Apis::GenomicsV1beta2::SearchAnnotationsRequest] search_annotations_request_object
|
483
|
-
# @param [String] fields
|
484
|
-
# Selector specifying which fields to include in a partial response.
|
485
|
-
# @param [String] quota_user
|
486
|
-
# Available to use for quota purposes for server-side applications. Can be any
|
487
|
-
# arbitrary string assigned to a user, but should not exceed 40 characters.
|
488
|
-
# Overrides userIp if both are provided.
|
489
|
-
# @param [String] user_ip
|
490
|
-
# IP address of the site where the request originates. Use this if you want to
|
491
|
-
# enforce per-user limits.
|
492
|
-
# @param [Google::Apis::RequestOptions] options
|
493
|
-
# Request-specific options
|
494
|
-
#
|
495
|
-
# @yield [result, err] Result & error if block supplied
|
496
|
-
# @yieldparam result [Google::Apis::GenomicsV1beta2::SearchAnnotationsResponse] parsed result object
|
497
|
-
# @yieldparam err [StandardError] error object if request failed
|
498
|
-
#
|
499
|
-
# @return [Google::Apis::GenomicsV1beta2::SearchAnnotationsResponse]
|
500
|
-
#
|
501
|
-
# @raise [Google::Apis::ServerError] An error occurred on the server and the request can be retried
|
502
|
-
# @raise [Google::Apis::ClientError] The request is invalid and should not be retried without modification
|
503
|
-
# @raise [Google::Apis::AuthorizationError] Authorization is required
|
504
|
-
def search_annotations(search_annotations_request_object = nil, fields: nil, quota_user: nil, user_ip: nil, options: nil, &block)
|
505
|
-
path = 'annotations/search'
|
506
|
-
command = make_simple_command(:post, path, options)
|
507
|
-
command.request_representation = Google::Apis::GenomicsV1beta2::SearchAnnotationsRequest::Representation
|
508
|
-
command.request_object = search_annotations_request_object
|
509
|
-
command.response_representation = Google::Apis::GenomicsV1beta2::SearchAnnotationsResponse::Representation
|
510
|
-
command.response_class = Google::Apis::GenomicsV1beta2::SearchAnnotationsResponse
|
511
|
-
command.query['fields'] = fields unless fields.nil?
|
512
|
-
command.query['quotaUser'] = quota_user unless quota_user.nil?
|
513
|
-
command.query['userIp'] = user_ip unless user_ip.nil?
|
514
|
-
execute_or_queue_command(command, &block)
|
515
|
-
end
|
516
|
-
|
517
|
-
# Updates an annotation. The update must respect all mutability restrictions and
|
518
|
-
# other invariants described on the annotation resource. Caller must have WRITE
|
519
|
-
# permission for the associated dataset.
|
520
|
-
# @param [String] annotation_id
|
521
|
-
# The ID of the annotation set to be updated.
|
522
|
-
# @param [Google::Apis::GenomicsV1beta2::Annotation] annotation_object
|
523
|
-
# @param [String] fields
|
524
|
-
# Selector specifying which fields to include in a partial response.
|
525
|
-
# @param [String] quota_user
|
526
|
-
# Available to use for quota purposes for server-side applications. Can be any
|
527
|
-
# arbitrary string assigned to a user, but should not exceed 40 characters.
|
528
|
-
# Overrides userIp if both are provided.
|
529
|
-
# @param [String] user_ip
|
530
|
-
# IP address of the site where the request originates. Use this if you want to
|
531
|
-
# enforce per-user limits.
|
532
|
-
# @param [Google::Apis::RequestOptions] options
|
533
|
-
# Request-specific options
|
534
|
-
#
|
535
|
-
# @yield [result, err] Result & error if block supplied
|
536
|
-
# @yieldparam result [Google::Apis::GenomicsV1beta2::Annotation] parsed result object
|
537
|
-
# @yieldparam err [StandardError] error object if request failed
|
538
|
-
#
|
539
|
-
# @return [Google::Apis::GenomicsV1beta2::Annotation]
|
540
|
-
#
|
541
|
-
# @raise [Google::Apis::ServerError] An error occurred on the server and the request can be retried
|
542
|
-
# @raise [Google::Apis::ClientError] The request is invalid and should not be retried without modification
|
543
|
-
# @raise [Google::Apis::AuthorizationError] Authorization is required
|
544
|
-
def update_annotation(annotation_id, annotation_object = nil, fields: nil, quota_user: nil, user_ip: nil, options: nil, &block)
|
545
|
-
path = 'annotations/{annotationId}'
|
546
|
-
command = make_simple_command(:put, path, options)
|
547
|
-
command.request_representation = Google::Apis::GenomicsV1beta2::Annotation::Representation
|
548
|
-
command.request_object = annotation_object
|
549
|
-
command.response_representation = Google::Apis::GenomicsV1beta2::Annotation::Representation
|
550
|
-
command.response_class = Google::Apis::GenomicsV1beta2::Annotation
|
551
|
-
command.params['annotationId'] = annotation_id unless annotation_id.nil?
|
552
|
-
command.query['fields'] = fields unless fields.nil?
|
553
|
-
command.query['quotaUser'] = quota_user unless quota_user.nil?
|
554
|
-
command.query['userIp'] = user_ip unless user_ip.nil?
|
555
|
-
execute_or_queue_command(command, &block)
|
556
|
-
end
|
557
|
-
|
558
|
-
# Creates a new call set.
|
559
|
-
# @param [Google::Apis::GenomicsV1beta2::CallSet] call_set_object
|
560
|
-
# @param [String] fields
|
561
|
-
# Selector specifying which fields to include in a partial response.
|
562
|
-
# @param [String] quota_user
|
563
|
-
# Available to use for quota purposes for server-side applications. Can be any
|
564
|
-
# arbitrary string assigned to a user, but should not exceed 40 characters.
|
565
|
-
# Overrides userIp if both are provided.
|
566
|
-
# @param [String] user_ip
|
567
|
-
# IP address of the site where the request originates. Use this if you want to
|
568
|
-
# enforce per-user limits.
|
569
|
-
# @param [Google::Apis::RequestOptions] options
|
570
|
-
# Request-specific options
|
571
|
-
#
|
572
|
-
# @yield [result, err] Result & error if block supplied
|
573
|
-
# @yieldparam result [Google::Apis::GenomicsV1beta2::CallSet] parsed result object
|
574
|
-
# @yieldparam err [StandardError] error object if request failed
|
575
|
-
#
|
576
|
-
# @return [Google::Apis::GenomicsV1beta2::CallSet]
|
577
|
-
#
|
578
|
-
# @raise [Google::Apis::ServerError] An error occurred on the server and the request can be retried
|
579
|
-
# @raise [Google::Apis::ClientError] The request is invalid and should not be retried without modification
|
580
|
-
# @raise [Google::Apis::AuthorizationError] Authorization is required
|
581
|
-
def create_call_set(call_set_object = nil, fields: nil, quota_user: nil, user_ip: nil, options: nil, &block)
|
582
|
-
path = 'callsets'
|
583
|
-
command = make_simple_command(:post, path, options)
|
584
|
-
command.request_representation = Google::Apis::GenomicsV1beta2::CallSet::Representation
|
585
|
-
command.request_object = call_set_object
|
586
|
-
command.response_representation = Google::Apis::GenomicsV1beta2::CallSet::Representation
|
587
|
-
command.response_class = Google::Apis::GenomicsV1beta2::CallSet
|
588
|
-
command.query['fields'] = fields unless fields.nil?
|
589
|
-
command.query['quotaUser'] = quota_user unless quota_user.nil?
|
590
|
-
command.query['userIp'] = user_ip unless user_ip.nil?
|
591
|
-
execute_or_queue_command(command, &block)
|
592
|
-
end
|
593
|
-
|
594
|
-
# Deletes a call set.
|
595
|
-
# @param [String] call_set_id
|
596
|
-
# The ID of the call set to be deleted.
|
597
|
-
# @param [String] fields
|
598
|
-
# Selector specifying which fields to include in a partial response.
|
599
|
-
# @param [String] quota_user
|
600
|
-
# Available to use for quota purposes for server-side applications. Can be any
|
601
|
-
# arbitrary string assigned to a user, but should not exceed 40 characters.
|
602
|
-
# Overrides userIp if both are provided.
|
603
|
-
# @param [String] user_ip
|
604
|
-
# IP address of the site where the request originates. Use this if you want to
|
605
|
-
# enforce per-user limits.
|
606
|
-
# @param [Google::Apis::RequestOptions] options
|
607
|
-
# Request-specific options
|
608
|
-
#
|
609
|
-
# @yield [result, err] Result & error if block supplied
|
610
|
-
# @yieldparam result [NilClass] No result returned for this method
|
611
|
-
# @yieldparam err [StandardError] error object if request failed
|
612
|
-
#
|
613
|
-
# @return [void]
|
614
|
-
#
|
615
|
-
# @raise [Google::Apis::ServerError] An error occurred on the server and the request can be retried
|
616
|
-
# @raise [Google::Apis::ClientError] The request is invalid and should not be retried without modification
|
617
|
-
# @raise [Google::Apis::AuthorizationError] Authorization is required
|
618
|
-
def delete_call_set(call_set_id, fields: nil, quota_user: nil, user_ip: nil, options: nil, &block)
|
619
|
-
path = 'callsets/{callSetId}'
|
620
|
-
command = make_simple_command(:delete, path, options)
|
621
|
-
command.params['callSetId'] = call_set_id unless call_set_id.nil?
|
622
|
-
command.query['fields'] = fields unless fields.nil?
|
623
|
-
command.query['quotaUser'] = quota_user unless quota_user.nil?
|
624
|
-
command.query['userIp'] = user_ip unless user_ip.nil?
|
625
|
-
execute_or_queue_command(command, &block)
|
626
|
-
end
|
627
|
-
|
628
|
-
# Gets a call set by ID.
|
629
|
-
# @param [String] call_set_id
|
630
|
-
# The ID of the call set.
|
631
|
-
# @param [String] fields
|
632
|
-
# Selector specifying which fields to include in a partial response.
|
633
|
-
# @param [String] quota_user
|
634
|
-
# Available to use for quota purposes for server-side applications. Can be any
|
635
|
-
# arbitrary string assigned to a user, but should not exceed 40 characters.
|
636
|
-
# Overrides userIp if both are provided.
|
637
|
-
# @param [String] user_ip
|
638
|
-
# IP address of the site where the request originates. Use this if you want to
|
639
|
-
# enforce per-user limits.
|
640
|
-
# @param [Google::Apis::RequestOptions] options
|
641
|
-
# Request-specific options
|
642
|
-
#
|
643
|
-
# @yield [result, err] Result & error if block supplied
|
644
|
-
# @yieldparam result [Google::Apis::GenomicsV1beta2::CallSet] parsed result object
|
645
|
-
# @yieldparam err [StandardError] error object if request failed
|
646
|
-
#
|
647
|
-
# @return [Google::Apis::GenomicsV1beta2::CallSet]
|
648
|
-
#
|
649
|
-
# @raise [Google::Apis::ServerError] An error occurred on the server and the request can be retried
|
650
|
-
# @raise [Google::Apis::ClientError] The request is invalid and should not be retried without modification
|
651
|
-
# @raise [Google::Apis::AuthorizationError] Authorization is required
|
652
|
-
def get_call_set(call_set_id, fields: nil, quota_user: nil, user_ip: nil, options: nil, &block)
|
653
|
-
path = 'callsets/{callSetId}'
|
654
|
-
command = make_simple_command(:get, path, options)
|
655
|
-
command.response_representation = Google::Apis::GenomicsV1beta2::CallSet::Representation
|
656
|
-
command.response_class = Google::Apis::GenomicsV1beta2::CallSet
|
657
|
-
command.params['callSetId'] = call_set_id unless call_set_id.nil?
|
658
|
-
command.query['fields'] = fields unless fields.nil?
|
659
|
-
command.query['quotaUser'] = quota_user unless quota_user.nil?
|
660
|
-
command.query['userIp'] = user_ip unless user_ip.nil?
|
661
|
-
execute_or_queue_command(command, &block)
|
662
|
-
end
|
663
|
-
|
664
|
-
# Updates a call set. This method supports patch semantics.
|
665
|
-
# @param [String] call_set_id
|
666
|
-
# The ID of the call set to be updated.
|
667
|
-
# @param [Google::Apis::GenomicsV1beta2::CallSet] call_set_object
|
668
|
-
# @param [String] fields
|
669
|
-
# Selector specifying which fields to include in a partial response.
|
670
|
-
# @param [String] quota_user
|
671
|
-
# Available to use for quota purposes for server-side applications. Can be any
|
672
|
-
# arbitrary string assigned to a user, but should not exceed 40 characters.
|
673
|
-
# Overrides userIp if both are provided.
|
674
|
-
# @param [String] user_ip
|
675
|
-
# IP address of the site where the request originates. Use this if you want to
|
676
|
-
# enforce per-user limits.
|
677
|
-
# @param [Google::Apis::RequestOptions] options
|
678
|
-
# Request-specific options
|
679
|
-
#
|
680
|
-
# @yield [result, err] Result & error if block supplied
|
681
|
-
# @yieldparam result [Google::Apis::GenomicsV1beta2::CallSet] parsed result object
|
682
|
-
# @yieldparam err [StandardError] error object if request failed
|
683
|
-
#
|
684
|
-
# @return [Google::Apis::GenomicsV1beta2::CallSet]
|
685
|
-
#
|
686
|
-
# @raise [Google::Apis::ServerError] An error occurred on the server and the request can be retried
|
687
|
-
# @raise [Google::Apis::ClientError] The request is invalid and should not be retried without modification
|
688
|
-
# @raise [Google::Apis::AuthorizationError] Authorization is required
|
689
|
-
def patch_call_set(call_set_id, call_set_object = nil, fields: nil, quota_user: nil, user_ip: nil, options: nil, &block)
|
690
|
-
path = 'callsets/{callSetId}'
|
691
|
-
command = make_simple_command(:patch, path, options)
|
692
|
-
command.request_representation = Google::Apis::GenomicsV1beta2::CallSet::Representation
|
693
|
-
command.request_object = call_set_object
|
694
|
-
command.response_representation = Google::Apis::GenomicsV1beta2::CallSet::Representation
|
695
|
-
command.response_class = Google::Apis::GenomicsV1beta2::CallSet
|
696
|
-
command.params['callSetId'] = call_set_id unless call_set_id.nil?
|
697
|
-
command.query['fields'] = fields unless fields.nil?
|
698
|
-
command.query['quotaUser'] = quota_user unless quota_user.nil?
|
699
|
-
command.query['userIp'] = user_ip unless user_ip.nil?
|
700
|
-
execute_or_queue_command(command, &block)
|
701
|
-
end
|
702
|
-
|
703
|
-
# Gets a list of call sets matching the criteria.
|
704
|
-
# Implements GlobalAllianceApi.searchCallSets.
|
705
|
-
# @param [Google::Apis::GenomicsV1beta2::SearchCallSetsRequest] search_call_sets_request_object
|
706
|
-
# @param [String] fields
|
707
|
-
# Selector specifying which fields to include in a partial response.
|
708
|
-
# @param [String] quota_user
|
709
|
-
# Available to use for quota purposes for server-side applications. Can be any
|
710
|
-
# arbitrary string assigned to a user, but should not exceed 40 characters.
|
711
|
-
# Overrides userIp if both are provided.
|
712
|
-
# @param [String] user_ip
|
713
|
-
# IP address of the site where the request originates. Use this if you want to
|
714
|
-
# enforce per-user limits.
|
715
|
-
# @param [Google::Apis::RequestOptions] options
|
716
|
-
# Request-specific options
|
717
|
-
#
|
718
|
-
# @yield [result, err] Result & error if block supplied
|
719
|
-
# @yieldparam result [Google::Apis::GenomicsV1beta2::SearchCallSetsResponse] parsed result object
|
720
|
-
# @yieldparam err [StandardError] error object if request failed
|
721
|
-
#
|
722
|
-
# @return [Google::Apis::GenomicsV1beta2::SearchCallSetsResponse]
|
723
|
-
#
|
724
|
-
# @raise [Google::Apis::ServerError] An error occurred on the server and the request can be retried
|
725
|
-
# @raise [Google::Apis::ClientError] The request is invalid and should not be retried without modification
|
726
|
-
# @raise [Google::Apis::AuthorizationError] Authorization is required
|
727
|
-
def search_call_sets(search_call_sets_request_object = nil, fields: nil, quota_user: nil, user_ip: nil, options: nil, &block)
|
728
|
-
path = 'callsets/search'
|
729
|
-
command = make_simple_command(:post, path, options)
|
730
|
-
command.request_representation = Google::Apis::GenomicsV1beta2::SearchCallSetsRequest::Representation
|
731
|
-
command.request_object = search_call_sets_request_object
|
732
|
-
command.response_representation = Google::Apis::GenomicsV1beta2::SearchCallSetsResponse::Representation
|
733
|
-
command.response_class = Google::Apis::GenomicsV1beta2::SearchCallSetsResponse
|
734
|
-
command.query['fields'] = fields unless fields.nil?
|
735
|
-
command.query['quotaUser'] = quota_user unless quota_user.nil?
|
736
|
-
command.query['userIp'] = user_ip unless user_ip.nil?
|
737
|
-
execute_or_queue_command(command, &block)
|
738
|
-
end
|
739
|
-
|
740
|
-
# Updates a call set.
|
741
|
-
# @param [String] call_set_id
|
742
|
-
# The ID of the call set to be updated.
|
743
|
-
# @param [Google::Apis::GenomicsV1beta2::CallSet] call_set_object
|
744
|
-
# @param [String] fields
|
745
|
-
# Selector specifying which fields to include in a partial response.
|
746
|
-
# @param [String] quota_user
|
747
|
-
# Available to use for quota purposes for server-side applications. Can be any
|
748
|
-
# arbitrary string assigned to a user, but should not exceed 40 characters.
|
749
|
-
# Overrides userIp if both are provided.
|
750
|
-
# @param [String] user_ip
|
751
|
-
# IP address of the site where the request originates. Use this if you want to
|
752
|
-
# enforce per-user limits.
|
753
|
-
# @param [Google::Apis::RequestOptions] options
|
754
|
-
# Request-specific options
|
755
|
-
#
|
756
|
-
# @yield [result, err] Result & error if block supplied
|
757
|
-
# @yieldparam result [Google::Apis::GenomicsV1beta2::CallSet] parsed result object
|
758
|
-
# @yieldparam err [StandardError] error object if request failed
|
759
|
-
#
|
760
|
-
# @return [Google::Apis::GenomicsV1beta2::CallSet]
|
761
|
-
#
|
762
|
-
# @raise [Google::Apis::ServerError] An error occurred on the server and the request can be retried
|
763
|
-
# @raise [Google::Apis::ClientError] The request is invalid and should not be retried without modification
|
764
|
-
# @raise [Google::Apis::AuthorizationError] Authorization is required
|
765
|
-
def update_call_set(call_set_id, call_set_object = nil, fields: nil, quota_user: nil, user_ip: nil, options: nil, &block)
|
766
|
-
path = 'callsets/{callSetId}'
|
767
|
-
command = make_simple_command(:put, path, options)
|
768
|
-
command.request_representation = Google::Apis::GenomicsV1beta2::CallSet::Representation
|
769
|
-
command.request_object = call_set_object
|
770
|
-
command.response_representation = Google::Apis::GenomicsV1beta2::CallSet::Representation
|
771
|
-
command.response_class = Google::Apis::GenomicsV1beta2::CallSet
|
772
|
-
command.params['callSetId'] = call_set_id unless call_set_id.nil?
|
773
|
-
command.query['fields'] = fields unless fields.nil?
|
774
|
-
command.query['quotaUser'] = quota_user unless quota_user.nil?
|
775
|
-
command.query['userIp'] = user_ip unless user_ip.nil?
|
776
|
-
execute_or_queue_command(command, &block)
|
777
|
-
end
|
778
|
-
|
779
|
-
# Creates a new dataset.
|
780
|
-
# @param [Google::Apis::GenomicsV1beta2::Dataset] dataset_object
|
781
|
-
# @param [String] fields
|
782
|
-
# Selector specifying which fields to include in a partial response.
|
783
|
-
# @param [String] quota_user
|
784
|
-
# Available to use for quota purposes for server-side applications. Can be any
|
785
|
-
# arbitrary string assigned to a user, but should not exceed 40 characters.
|
786
|
-
# Overrides userIp if both are provided.
|
787
|
-
# @param [String] user_ip
|
788
|
-
# IP address of the site where the request originates. Use this if you want to
|
789
|
-
# enforce per-user limits.
|
790
|
-
# @param [Google::Apis::RequestOptions] options
|
791
|
-
# Request-specific options
|
792
|
-
#
|
793
|
-
# @yield [result, err] Result & error if block supplied
|
794
|
-
# @yieldparam result [Google::Apis::GenomicsV1beta2::Dataset] parsed result object
|
795
|
-
# @yieldparam err [StandardError] error object if request failed
|
796
|
-
#
|
797
|
-
# @return [Google::Apis::GenomicsV1beta2::Dataset]
|
798
|
-
#
|
799
|
-
# @raise [Google::Apis::ServerError] An error occurred on the server and the request can be retried
|
800
|
-
# @raise [Google::Apis::ClientError] The request is invalid and should not be retried without modification
|
801
|
-
# @raise [Google::Apis::AuthorizationError] Authorization is required
|
802
|
-
def create_dataset(dataset_object = nil, fields: nil, quota_user: nil, user_ip: nil, options: nil, &block)
|
803
|
-
path = 'datasets'
|
804
|
-
command = make_simple_command(:post, path, options)
|
805
|
-
command.request_representation = Google::Apis::GenomicsV1beta2::Dataset::Representation
|
806
|
-
command.request_object = dataset_object
|
807
|
-
command.response_representation = Google::Apis::GenomicsV1beta2::Dataset::Representation
|
808
|
-
command.response_class = Google::Apis::GenomicsV1beta2::Dataset
|
809
|
-
command.query['fields'] = fields unless fields.nil?
|
810
|
-
command.query['quotaUser'] = quota_user unless quota_user.nil?
|
811
|
-
command.query['userIp'] = user_ip unless user_ip.nil?
|
812
|
-
execute_or_queue_command(command, &block)
|
813
|
-
end
|
814
|
-
|
815
|
-
# Deletes a dataset.
|
816
|
-
# @param [String] dataset_id
|
817
|
-
# The ID of the dataset to be deleted.
|
818
|
-
# @param [String] fields
|
819
|
-
# Selector specifying which fields to include in a partial response.
|
820
|
-
# @param [String] quota_user
|
821
|
-
# Available to use for quota purposes for server-side applications. Can be any
|
822
|
-
# arbitrary string assigned to a user, but should not exceed 40 characters.
|
823
|
-
# Overrides userIp if both are provided.
|
824
|
-
# @param [String] user_ip
|
825
|
-
# IP address of the site where the request originates. Use this if you want to
|
826
|
-
# enforce per-user limits.
|
827
|
-
# @param [Google::Apis::RequestOptions] options
|
828
|
-
# Request-specific options
|
829
|
-
#
|
830
|
-
# @yield [result, err] Result & error if block supplied
|
831
|
-
# @yieldparam result [NilClass] No result returned for this method
|
832
|
-
# @yieldparam err [StandardError] error object if request failed
|
833
|
-
#
|
834
|
-
# @return [void]
|
835
|
-
#
|
836
|
-
# @raise [Google::Apis::ServerError] An error occurred on the server and the request can be retried
|
837
|
-
# @raise [Google::Apis::ClientError] The request is invalid and should not be retried without modification
|
838
|
-
# @raise [Google::Apis::AuthorizationError] Authorization is required
|
839
|
-
def delete_dataset(dataset_id, fields: nil, quota_user: nil, user_ip: nil, options: nil, &block)
|
840
|
-
path = 'datasets/{datasetId}'
|
841
|
-
command = make_simple_command(:delete, path, options)
|
842
|
-
command.params['datasetId'] = dataset_id unless dataset_id.nil?
|
843
|
-
command.query['fields'] = fields unless fields.nil?
|
844
|
-
command.query['quotaUser'] = quota_user unless quota_user.nil?
|
845
|
-
command.query['userIp'] = user_ip unless user_ip.nil?
|
846
|
-
execute_or_queue_command(command, &block)
|
847
|
-
end
|
848
|
-
|
849
|
-
# Gets a dataset by ID.
|
850
|
-
# @param [String] dataset_id
|
851
|
-
# The ID of the dataset.
|
852
|
-
# @param [String] fields
|
853
|
-
# Selector specifying which fields to include in a partial response.
|
854
|
-
# @param [String] quota_user
|
855
|
-
# Available to use for quota purposes for server-side applications. Can be any
|
856
|
-
# arbitrary string assigned to a user, but should not exceed 40 characters.
|
857
|
-
# Overrides userIp if both are provided.
|
858
|
-
# @param [String] user_ip
|
859
|
-
# IP address of the site where the request originates. Use this if you want to
|
860
|
-
# enforce per-user limits.
|
861
|
-
# @param [Google::Apis::RequestOptions] options
|
862
|
-
# Request-specific options
|
863
|
-
#
|
864
|
-
# @yield [result, err] Result & error if block supplied
|
865
|
-
# @yieldparam result [Google::Apis::GenomicsV1beta2::Dataset] parsed result object
|
866
|
-
# @yieldparam err [StandardError] error object if request failed
|
867
|
-
#
|
868
|
-
# @return [Google::Apis::GenomicsV1beta2::Dataset]
|
869
|
-
#
|
870
|
-
# @raise [Google::Apis::ServerError] An error occurred on the server and the request can be retried
|
871
|
-
# @raise [Google::Apis::ClientError] The request is invalid and should not be retried without modification
|
872
|
-
# @raise [Google::Apis::AuthorizationError] Authorization is required
|
873
|
-
def get_dataset(dataset_id, fields: nil, quota_user: nil, user_ip: nil, options: nil, &block)
|
874
|
-
path = 'datasets/{datasetId}'
|
875
|
-
command = make_simple_command(:get, path, options)
|
876
|
-
command.response_representation = Google::Apis::GenomicsV1beta2::Dataset::Representation
|
877
|
-
command.response_class = Google::Apis::GenomicsV1beta2::Dataset
|
878
|
-
command.params['datasetId'] = dataset_id unless dataset_id.nil?
|
879
|
-
command.query['fields'] = fields unless fields.nil?
|
880
|
-
command.query['quotaUser'] = quota_user unless quota_user.nil?
|
881
|
-
command.query['userIp'] = user_ip unless user_ip.nil?
|
882
|
-
execute_or_queue_command(command, &block)
|
883
|
-
end
|
884
|
-
|
885
|
-
# Lists datasets within a project.
|
886
|
-
# @param [Fixnum] page_size
|
887
|
-
# The maximum number of results returned by this request. If unspecified,
|
888
|
-
# defaults to 50.
|
889
|
-
# @param [String] page_token
|
890
|
-
# The continuation token, which is used to page through large result sets. To
|
891
|
-
# get the next page of results, set this parameter to the value of nextPageToken
|
892
|
-
# from the previous response.
|
893
|
-
# @param [String] project_number
|
894
|
-
# Required. The project to list datasets for.
|
895
|
-
# @param [String] fields
|
896
|
-
# Selector specifying which fields to include in a partial response.
|
897
|
-
# @param [String] quota_user
|
898
|
-
# Available to use for quota purposes for server-side applications. Can be any
|
899
|
-
# arbitrary string assigned to a user, but should not exceed 40 characters.
|
900
|
-
# Overrides userIp if both are provided.
|
901
|
-
# @param [String] user_ip
|
902
|
-
# IP address of the site where the request originates. Use this if you want to
|
903
|
-
# enforce per-user limits.
|
904
|
-
# @param [Google::Apis::RequestOptions] options
|
905
|
-
# Request-specific options
|
906
|
-
#
|
907
|
-
# @yield [result, err] Result & error if block supplied
|
908
|
-
# @yieldparam result [Google::Apis::GenomicsV1beta2::ListDatasetsResponse] parsed result object
|
909
|
-
# @yieldparam err [StandardError] error object if request failed
|
910
|
-
#
|
911
|
-
# @return [Google::Apis::GenomicsV1beta2::ListDatasetsResponse]
|
912
|
-
#
|
913
|
-
# @raise [Google::Apis::ServerError] An error occurred on the server and the request can be retried
|
914
|
-
# @raise [Google::Apis::ClientError] The request is invalid and should not be retried without modification
|
915
|
-
# @raise [Google::Apis::AuthorizationError] Authorization is required
|
916
|
-
def list_datasets(page_size: nil, page_token: nil, project_number: nil, fields: nil, quota_user: nil, user_ip: nil, options: nil, &block)
|
917
|
-
path = 'datasets'
|
918
|
-
command = make_simple_command(:get, path, options)
|
919
|
-
command.response_representation = Google::Apis::GenomicsV1beta2::ListDatasetsResponse::Representation
|
920
|
-
command.response_class = Google::Apis::GenomicsV1beta2::ListDatasetsResponse
|
921
|
-
command.query['pageSize'] = page_size unless page_size.nil?
|
922
|
-
command.query['pageToken'] = page_token unless page_token.nil?
|
923
|
-
command.query['projectNumber'] = project_number unless project_number.nil?
|
924
|
-
command.query['fields'] = fields unless fields.nil?
|
925
|
-
command.query['quotaUser'] = quota_user unless quota_user.nil?
|
926
|
-
command.query['userIp'] = user_ip unless user_ip.nil?
|
927
|
-
execute_or_queue_command(command, &block)
|
928
|
-
end
|
929
|
-
|
930
|
-
# Updates a dataset. This method supports patch semantics.
|
931
|
-
# @param [String] dataset_id
|
932
|
-
# The ID of the dataset to be updated.
|
933
|
-
# @param [Google::Apis::GenomicsV1beta2::Dataset] dataset_object
|
934
|
-
# @param [String] fields
|
935
|
-
# Selector specifying which fields to include in a partial response.
|
936
|
-
# @param [String] quota_user
|
937
|
-
# Available to use for quota purposes for server-side applications. Can be any
|
938
|
-
# arbitrary string assigned to a user, but should not exceed 40 characters.
|
939
|
-
# Overrides userIp if both are provided.
|
940
|
-
# @param [String] user_ip
|
941
|
-
# IP address of the site where the request originates. Use this if you want to
|
942
|
-
# enforce per-user limits.
|
943
|
-
# @param [Google::Apis::RequestOptions] options
|
944
|
-
# Request-specific options
|
945
|
-
#
|
946
|
-
# @yield [result, err] Result & error if block supplied
|
947
|
-
# @yieldparam result [Google::Apis::GenomicsV1beta2::Dataset] parsed result object
|
948
|
-
# @yieldparam err [StandardError] error object if request failed
|
949
|
-
#
|
950
|
-
# @return [Google::Apis::GenomicsV1beta2::Dataset]
|
951
|
-
#
|
952
|
-
# @raise [Google::Apis::ServerError] An error occurred on the server and the request can be retried
|
953
|
-
# @raise [Google::Apis::ClientError] The request is invalid and should not be retried without modification
|
954
|
-
# @raise [Google::Apis::AuthorizationError] Authorization is required
|
955
|
-
def patch_dataset(dataset_id, dataset_object = nil, fields: nil, quota_user: nil, user_ip: nil, options: nil, &block)
|
956
|
-
path = 'datasets/{datasetId}'
|
957
|
-
command = make_simple_command(:patch, path, options)
|
958
|
-
command.request_representation = Google::Apis::GenomicsV1beta2::Dataset::Representation
|
959
|
-
command.request_object = dataset_object
|
960
|
-
command.response_representation = Google::Apis::GenomicsV1beta2::Dataset::Representation
|
961
|
-
command.response_class = Google::Apis::GenomicsV1beta2::Dataset
|
962
|
-
command.params['datasetId'] = dataset_id unless dataset_id.nil?
|
963
|
-
command.query['fields'] = fields unless fields.nil?
|
964
|
-
command.query['quotaUser'] = quota_user unless quota_user.nil?
|
965
|
-
command.query['userIp'] = user_ip unless user_ip.nil?
|
966
|
-
execute_or_queue_command(command, &block)
|
967
|
-
end
|
968
|
-
|
969
|
-
# Undeletes a dataset by restoring a dataset which was deleted via this API.
|
970
|
-
# This operation is only possible for a week after the deletion occurred.
|
971
|
-
# @param [String] dataset_id
|
972
|
-
# The ID of the dataset to be undeleted.
|
973
|
-
# @param [String] fields
|
974
|
-
# Selector specifying which fields to include in a partial response.
|
975
|
-
# @param [String] quota_user
|
976
|
-
# Available to use for quota purposes for server-side applications. Can be any
|
977
|
-
# arbitrary string assigned to a user, but should not exceed 40 characters.
|
978
|
-
# Overrides userIp if both are provided.
|
979
|
-
# @param [String] user_ip
|
980
|
-
# IP address of the site where the request originates. Use this if you want to
|
981
|
-
# enforce per-user limits.
|
982
|
-
# @param [Google::Apis::RequestOptions] options
|
983
|
-
# Request-specific options
|
984
|
-
#
|
985
|
-
# @yield [result, err] Result & error if block supplied
|
986
|
-
# @yieldparam result [Google::Apis::GenomicsV1beta2::Dataset] parsed result object
|
987
|
-
# @yieldparam err [StandardError] error object if request failed
|
988
|
-
#
|
989
|
-
# @return [Google::Apis::GenomicsV1beta2::Dataset]
|
990
|
-
#
|
991
|
-
# @raise [Google::Apis::ServerError] An error occurred on the server and the request can be retried
|
992
|
-
# @raise [Google::Apis::ClientError] The request is invalid and should not be retried without modification
|
993
|
-
# @raise [Google::Apis::AuthorizationError] Authorization is required
|
994
|
-
def undelete_dataset(dataset_id, fields: nil, quota_user: nil, user_ip: nil, options: nil, &block)
|
995
|
-
path = 'datasets/{datasetId}/undelete'
|
996
|
-
command = make_simple_command(:post, path, options)
|
997
|
-
command.response_representation = Google::Apis::GenomicsV1beta2::Dataset::Representation
|
998
|
-
command.response_class = Google::Apis::GenomicsV1beta2::Dataset
|
999
|
-
command.params['datasetId'] = dataset_id unless dataset_id.nil?
|
1000
|
-
command.query['fields'] = fields unless fields.nil?
|
1001
|
-
command.query['quotaUser'] = quota_user unless quota_user.nil?
|
1002
|
-
command.query['userIp'] = user_ip unless user_ip.nil?
|
1003
|
-
execute_or_queue_command(command, &block)
|
1004
|
-
end
|
1005
|
-
|
1006
|
-
# Updates a dataset.
|
1007
|
-
# @param [String] dataset_id
|
1008
|
-
# The ID of the dataset to be updated.
|
1009
|
-
# @param [Google::Apis::GenomicsV1beta2::Dataset] dataset_object
|
1010
|
-
# @param [String] fields
|
1011
|
-
# Selector specifying which fields to include in a partial response.
|
1012
|
-
# @param [String] quota_user
|
1013
|
-
# Available to use for quota purposes for server-side applications. Can be any
|
1014
|
-
# arbitrary string assigned to a user, but should not exceed 40 characters.
|
1015
|
-
# Overrides userIp if both are provided.
|
1016
|
-
# @param [String] user_ip
|
1017
|
-
# IP address of the site where the request originates. Use this if you want to
|
1018
|
-
# enforce per-user limits.
|
1019
|
-
# @param [Google::Apis::RequestOptions] options
|
1020
|
-
# Request-specific options
|
1021
|
-
#
|
1022
|
-
# @yield [result, err] Result & error if block supplied
|
1023
|
-
# @yieldparam result [Google::Apis::GenomicsV1beta2::Dataset] parsed result object
|
1024
|
-
# @yieldparam err [StandardError] error object if request failed
|
1025
|
-
#
|
1026
|
-
# @return [Google::Apis::GenomicsV1beta2::Dataset]
|
1027
|
-
#
|
1028
|
-
# @raise [Google::Apis::ServerError] An error occurred on the server and the request can be retried
|
1029
|
-
# @raise [Google::Apis::ClientError] The request is invalid and should not be retried without modification
|
1030
|
-
# @raise [Google::Apis::AuthorizationError] Authorization is required
|
1031
|
-
def update_dataset(dataset_id, dataset_object = nil, fields: nil, quota_user: nil, user_ip: nil, options: nil, &block)
|
1032
|
-
path = 'datasets/{datasetId}'
|
1033
|
-
command = make_simple_command(:put, path, options)
|
1034
|
-
command.request_representation = Google::Apis::GenomicsV1beta2::Dataset::Representation
|
1035
|
-
command.request_object = dataset_object
|
1036
|
-
command.response_representation = Google::Apis::GenomicsV1beta2::Dataset::Representation
|
1037
|
-
command.response_class = Google::Apis::GenomicsV1beta2::Dataset
|
1038
|
-
command.params['datasetId'] = dataset_id unless dataset_id.nil?
|
1039
|
-
command.query['fields'] = fields unless fields.nil?
|
1040
|
-
command.query['quotaUser'] = quota_user unless quota_user.nil?
|
1041
|
-
command.query['userIp'] = user_ip unless user_ip.nil?
|
1042
|
-
execute_or_queue_command(command, &block)
|
1043
|
-
end
|
1044
|
-
|
1045
|
-
# Creates and asynchronously runs an ad-hoc job. This is an experimental call
|
1046
|
-
# and may be removed or changed at any time.
|
1047
|
-
# @param [Google::Apis::GenomicsV1beta2::ExperimentalCreateJobRequest] experimental_create_job_request_object
|
1048
|
-
# @param [String] fields
|
1049
|
-
# Selector specifying which fields to include in a partial response.
|
1050
|
-
# @param [String] quota_user
|
1051
|
-
# Available to use for quota purposes for server-side applications. Can be any
|
1052
|
-
# arbitrary string assigned to a user, but should not exceed 40 characters.
|
1053
|
-
# Overrides userIp if both are provided.
|
1054
|
-
# @param [String] user_ip
|
1055
|
-
# IP address of the site where the request originates. Use this if you want to
|
1056
|
-
# enforce per-user limits.
|
1057
|
-
# @param [Google::Apis::RequestOptions] options
|
1058
|
-
# Request-specific options
|
1059
|
-
#
|
1060
|
-
# @yield [result, err] Result & error if block supplied
|
1061
|
-
# @yieldparam result [Google::Apis::GenomicsV1beta2::ExperimentalCreateJobResponse] parsed result object
|
1062
|
-
# @yieldparam err [StandardError] error object if request failed
|
1063
|
-
#
|
1064
|
-
# @return [Google::Apis::GenomicsV1beta2::ExperimentalCreateJobResponse]
|
1065
|
-
#
|
1066
|
-
# @raise [Google::Apis::ServerError] An error occurred on the server and the request can be retried
|
1067
|
-
# @raise [Google::Apis::ClientError] The request is invalid and should not be retried without modification
|
1068
|
-
# @raise [Google::Apis::AuthorizationError] Authorization is required
|
1069
|
-
def create_experimental_job(experimental_create_job_request_object = nil, fields: nil, quota_user: nil, user_ip: nil, options: nil, &block)
|
1070
|
-
path = 'experimental/jobs/create'
|
1071
|
-
command = make_simple_command(:post, path, options)
|
1072
|
-
command.request_representation = Google::Apis::GenomicsV1beta2::ExperimentalCreateJobRequest::Representation
|
1073
|
-
command.request_object = experimental_create_job_request_object
|
1074
|
-
command.response_representation = Google::Apis::GenomicsV1beta2::ExperimentalCreateJobResponse::Representation
|
1075
|
-
command.response_class = Google::Apis::GenomicsV1beta2::ExperimentalCreateJobResponse
|
1076
|
-
command.query['fields'] = fields unless fields.nil?
|
1077
|
-
command.query['quotaUser'] = quota_user unless quota_user.nil?
|
1078
|
-
command.query['userIp'] = user_ip unless user_ip.nil?
|
1079
|
-
execute_or_queue_command(command, &block)
|
1080
|
-
end
|
1081
|
-
|
1082
|
-
# Cancels a job by ID. Note that it is possible for partial results to be
|
1083
|
-
# generated and stored for cancelled jobs.
|
1084
|
-
# @param [String] job_id
|
1085
|
-
# Required. The ID of the job.
|
1086
|
-
# @param [String] fields
|
1087
|
-
# Selector specifying which fields to include in a partial response.
|
1088
|
-
# @param [String] quota_user
|
1089
|
-
# Available to use for quota purposes for server-side applications. Can be any
|
1090
|
-
# arbitrary string assigned to a user, but should not exceed 40 characters.
|
1091
|
-
# Overrides userIp if both are provided.
|
1092
|
-
# @param [String] user_ip
|
1093
|
-
# IP address of the site where the request originates. Use this if you want to
|
1094
|
-
# enforce per-user limits.
|
1095
|
-
# @param [Google::Apis::RequestOptions] options
|
1096
|
-
# Request-specific options
|
1097
|
-
#
|
1098
|
-
# @yield [result, err] Result & error if block supplied
|
1099
|
-
# @yieldparam result [NilClass] No result returned for this method
|
1100
|
-
# @yieldparam err [StandardError] error object if request failed
|
1101
|
-
#
|
1102
|
-
# @return [void]
|
1103
|
-
#
|
1104
|
-
# @raise [Google::Apis::ServerError] An error occurred on the server and the request can be retried
|
1105
|
-
# @raise [Google::Apis::ClientError] The request is invalid and should not be retried without modification
|
1106
|
-
# @raise [Google::Apis::AuthorizationError] Authorization is required
|
1107
|
-
def cancel_job(job_id, fields: nil, quota_user: nil, user_ip: nil, options: nil, &block)
|
1108
|
-
path = 'jobs/{jobId}/cancel'
|
1109
|
-
command = make_simple_command(:post, path, options)
|
1110
|
-
command.params['jobId'] = job_id unless job_id.nil?
|
1111
|
-
command.query['fields'] = fields unless fields.nil?
|
1112
|
-
command.query['quotaUser'] = quota_user unless quota_user.nil?
|
1113
|
-
command.query['userIp'] = user_ip unless user_ip.nil?
|
1114
|
-
execute_or_queue_command(command, &block)
|
1115
|
-
end
|
1116
|
-
|
1117
|
-
# Gets a job by ID.
|
1118
|
-
# @param [String] job_id
|
1119
|
-
# Required. The ID of the job.
|
1120
|
-
# @param [String] fields
|
1121
|
-
# Selector specifying which fields to include in a partial response.
|
1122
|
-
# @param [String] quota_user
|
1123
|
-
# Available to use for quota purposes for server-side applications. Can be any
|
1124
|
-
# arbitrary string assigned to a user, but should not exceed 40 characters.
|
1125
|
-
# Overrides userIp if both are provided.
|
1126
|
-
# @param [String] user_ip
|
1127
|
-
# IP address of the site where the request originates. Use this if you want to
|
1128
|
-
# enforce per-user limits.
|
1129
|
-
# @param [Google::Apis::RequestOptions] options
|
1130
|
-
# Request-specific options
|
1131
|
-
#
|
1132
|
-
# @yield [result, err] Result & error if block supplied
|
1133
|
-
# @yieldparam result [Google::Apis::GenomicsV1beta2::Job] parsed result object
|
1134
|
-
# @yieldparam err [StandardError] error object if request failed
|
1135
|
-
#
|
1136
|
-
# @return [Google::Apis::GenomicsV1beta2::Job]
|
1137
|
-
#
|
1138
|
-
# @raise [Google::Apis::ServerError] An error occurred on the server and the request can be retried
|
1139
|
-
# @raise [Google::Apis::ClientError] The request is invalid and should not be retried without modification
|
1140
|
-
# @raise [Google::Apis::AuthorizationError] Authorization is required
|
1141
|
-
def get_job(job_id, fields: nil, quota_user: nil, user_ip: nil, options: nil, &block)
|
1142
|
-
path = 'jobs/{jobId}'
|
1143
|
-
command = make_simple_command(:get, path, options)
|
1144
|
-
command.response_representation = Google::Apis::GenomicsV1beta2::Job::Representation
|
1145
|
-
command.response_class = Google::Apis::GenomicsV1beta2::Job
|
1146
|
-
command.params['jobId'] = job_id unless job_id.nil?
|
1147
|
-
command.query['fields'] = fields unless fields.nil?
|
1148
|
-
command.query['quotaUser'] = quota_user unless quota_user.nil?
|
1149
|
-
command.query['userIp'] = user_ip unless user_ip.nil?
|
1150
|
-
execute_or_queue_command(command, &block)
|
1151
|
-
end
|
1152
|
-
|
1153
|
-
# Gets a list of jobs matching the criteria.
|
1154
|
-
# @param [Google::Apis::GenomicsV1beta2::SearchJobsRequest] search_jobs_request_object
|
1155
|
-
# @param [String] fields
|
1156
|
-
# Selector specifying which fields to include in a partial response.
|
1157
|
-
# @param [String] quota_user
|
1158
|
-
# Available to use for quota purposes for server-side applications. Can be any
|
1159
|
-
# arbitrary string assigned to a user, but should not exceed 40 characters.
|
1160
|
-
# Overrides userIp if both are provided.
|
1161
|
-
# @param [String] user_ip
|
1162
|
-
# IP address of the site where the request originates. Use this if you want to
|
1163
|
-
# enforce per-user limits.
|
1164
|
-
# @param [Google::Apis::RequestOptions] options
|
1165
|
-
# Request-specific options
|
1166
|
-
#
|
1167
|
-
# @yield [result, err] Result & error if block supplied
|
1168
|
-
# @yieldparam result [Google::Apis::GenomicsV1beta2::SearchJobsResponse] parsed result object
|
1169
|
-
# @yieldparam err [StandardError] error object if request failed
|
1170
|
-
#
|
1171
|
-
# @return [Google::Apis::GenomicsV1beta2::SearchJobsResponse]
|
1172
|
-
#
|
1173
|
-
# @raise [Google::Apis::ServerError] An error occurred on the server and the request can be retried
|
1174
|
-
# @raise [Google::Apis::ClientError] The request is invalid and should not be retried without modification
|
1175
|
-
# @raise [Google::Apis::AuthorizationError] Authorization is required
|
1176
|
-
def search_jobs(search_jobs_request_object = nil, fields: nil, quota_user: nil, user_ip: nil, options: nil, &block)
|
1177
|
-
path = 'jobs/search'
|
1178
|
-
command = make_simple_command(:post, path, options)
|
1179
|
-
command.request_representation = Google::Apis::GenomicsV1beta2::SearchJobsRequest::Representation
|
1180
|
-
command.request_object = search_jobs_request_object
|
1181
|
-
command.response_representation = Google::Apis::GenomicsV1beta2::SearchJobsResponse::Representation
|
1182
|
-
command.response_class = Google::Apis::GenomicsV1beta2::SearchJobsResponse
|
1183
|
-
command.query['fields'] = fields unless fields.nil?
|
1184
|
-
command.query['quotaUser'] = quota_user unless quota_user.nil?
|
1185
|
-
command.query['userIp'] = user_ip unless user_ip.nil?
|
1186
|
-
execute_or_queue_command(command, &block)
|
1187
|
-
end
|
1188
|
-
|
1189
|
-
# Aligns read data from existing read group sets or files from Google Cloud
|
1190
|
-
# Storage. See the alignment and variant calling documentation for more details.
|
1191
|
-
# @param [Google::Apis::GenomicsV1beta2::AlignReadGroupSetsRequest] align_read_group_sets_request_object
|
1192
|
-
# @param [String] fields
|
1193
|
-
# Selector specifying which fields to include in a partial response.
|
1194
|
-
# @param [String] quota_user
|
1195
|
-
# Available to use for quota purposes for server-side applications. Can be any
|
1196
|
-
# arbitrary string assigned to a user, but should not exceed 40 characters.
|
1197
|
-
# Overrides userIp if both are provided.
|
1198
|
-
# @param [String] user_ip
|
1199
|
-
# IP address of the site where the request originates. Use this if you want to
|
1200
|
-
# enforce per-user limits.
|
1201
|
-
# @param [Google::Apis::RequestOptions] options
|
1202
|
-
# Request-specific options
|
1203
|
-
#
|
1204
|
-
# @yield [result, err] Result & error if block supplied
|
1205
|
-
# @yieldparam result [Google::Apis::GenomicsV1beta2::AlignReadGroupSetsResponse] parsed result object
|
1206
|
-
# @yieldparam err [StandardError] error object if request failed
|
1207
|
-
#
|
1208
|
-
# @return [Google::Apis::GenomicsV1beta2::AlignReadGroupSetsResponse]
|
1209
|
-
#
|
1210
|
-
# @raise [Google::Apis::ServerError] An error occurred on the server and the request can be retried
|
1211
|
-
# @raise [Google::Apis::ClientError] The request is invalid and should not be retried without modification
|
1212
|
-
# @raise [Google::Apis::AuthorizationError] Authorization is required
|
1213
|
-
def align_read_group_sets(align_read_group_sets_request_object = nil, fields: nil, quota_user: nil, user_ip: nil, options: nil, &block)
|
1214
|
-
path = 'readgroupsets/align'
|
1215
|
-
command = make_simple_command(:post, path, options)
|
1216
|
-
command.request_representation = Google::Apis::GenomicsV1beta2::AlignReadGroupSetsRequest::Representation
|
1217
|
-
command.request_object = align_read_group_sets_request_object
|
1218
|
-
command.response_representation = Google::Apis::GenomicsV1beta2::AlignReadGroupSetsResponse::Representation
|
1219
|
-
command.response_class = Google::Apis::GenomicsV1beta2::AlignReadGroupSetsResponse
|
1220
|
-
command.query['fields'] = fields unless fields.nil?
|
1221
|
-
command.query['quotaUser'] = quota_user unless quota_user.nil?
|
1222
|
-
command.query['userIp'] = user_ip unless user_ip.nil?
|
1223
|
-
execute_or_queue_command(command, &block)
|
1224
|
-
end
|
1225
|
-
|
1226
|
-
# Calls variants on read data from existing read group sets or files from Google
|
1227
|
-
# Cloud Storage. See the alignment and variant calling documentation for more
|
1228
|
-
# details.
|
1229
|
-
# @param [Google::Apis::GenomicsV1beta2::CallReadGroupSetsRequest] call_read_group_sets_request_object
|
1230
|
-
# @param [String] fields
|
1231
|
-
# Selector specifying which fields to include in a partial response.
|
1232
|
-
# @param [String] quota_user
|
1233
|
-
# Available to use for quota purposes for server-side applications. Can be any
|
1234
|
-
# arbitrary string assigned to a user, but should not exceed 40 characters.
|
1235
|
-
# Overrides userIp if both are provided.
|
1236
|
-
# @param [String] user_ip
|
1237
|
-
# IP address of the site where the request originates. Use this if you want to
|
1238
|
-
# enforce per-user limits.
|
1239
|
-
# @param [Google::Apis::RequestOptions] options
|
1240
|
-
# Request-specific options
|
1241
|
-
#
|
1242
|
-
# @yield [result, err] Result & error if block supplied
|
1243
|
-
# @yieldparam result [Google::Apis::GenomicsV1beta2::CallReadGroupSetsResponse] parsed result object
|
1244
|
-
# @yieldparam err [StandardError] error object if request failed
|
1245
|
-
#
|
1246
|
-
# @return [Google::Apis::GenomicsV1beta2::CallReadGroupSetsResponse]
|
1247
|
-
#
|
1248
|
-
# @raise [Google::Apis::ServerError] An error occurred on the server and the request can be retried
|
1249
|
-
# @raise [Google::Apis::ClientError] The request is invalid and should not be retried without modification
|
1250
|
-
# @raise [Google::Apis::AuthorizationError] Authorization is required
|
1251
|
-
def call_read_group_sets(call_read_group_sets_request_object = nil, fields: nil, quota_user: nil, user_ip: nil, options: nil, &block)
|
1252
|
-
path = 'readgroupsets/call'
|
1253
|
-
command = make_simple_command(:post, path, options)
|
1254
|
-
command.request_representation = Google::Apis::GenomicsV1beta2::CallReadGroupSetsRequest::Representation
|
1255
|
-
command.request_object = call_read_group_sets_request_object
|
1256
|
-
command.response_representation = Google::Apis::GenomicsV1beta2::CallReadGroupSetsResponse::Representation
|
1257
|
-
command.response_class = Google::Apis::GenomicsV1beta2::CallReadGroupSetsResponse
|
1258
|
-
command.query['fields'] = fields unless fields.nil?
|
1259
|
-
command.query['quotaUser'] = quota_user unless quota_user.nil?
|
1260
|
-
command.query['userIp'] = user_ip unless user_ip.nil?
|
1261
|
-
execute_or_queue_command(command, &block)
|
1262
|
-
end
|
1263
|
-
|
1264
|
-
# Deletes a read group set.
|
1265
|
-
# @param [String] read_group_set_id
|
1266
|
-
# The ID of the read group set to be deleted. The caller must have WRITE
|
1267
|
-
# permissions to the dataset associated with this read group set.
|
1268
|
-
# @param [String] fields
|
1269
|
-
# Selector specifying which fields to include in a partial response.
|
1270
|
-
# @param [String] quota_user
|
1271
|
-
# Available to use for quota purposes for server-side applications. Can be any
|
1272
|
-
# arbitrary string assigned to a user, but should not exceed 40 characters.
|
1273
|
-
# Overrides userIp if both are provided.
|
1274
|
-
# @param [String] user_ip
|
1275
|
-
# IP address of the site where the request originates. Use this if you want to
|
1276
|
-
# enforce per-user limits.
|
1277
|
-
# @param [Google::Apis::RequestOptions] options
|
1278
|
-
# Request-specific options
|
1279
|
-
#
|
1280
|
-
# @yield [result, err] Result & error if block supplied
|
1281
|
-
# @yieldparam result [NilClass] No result returned for this method
|
1282
|
-
# @yieldparam err [StandardError] error object if request failed
|
1283
|
-
#
|
1284
|
-
# @return [void]
|
1285
|
-
#
|
1286
|
-
# @raise [Google::Apis::ServerError] An error occurred on the server and the request can be retried
|
1287
|
-
# @raise [Google::Apis::ClientError] The request is invalid and should not be retried without modification
|
1288
|
-
# @raise [Google::Apis::AuthorizationError] Authorization is required
|
1289
|
-
def delete_read_group_set(read_group_set_id, fields: nil, quota_user: nil, user_ip: nil, options: nil, &block)
|
1290
|
-
path = 'readgroupsets/{readGroupSetId}'
|
1291
|
-
command = make_simple_command(:delete, path, options)
|
1292
|
-
command.params['readGroupSetId'] = read_group_set_id unless read_group_set_id.nil?
|
1293
|
-
command.query['fields'] = fields unless fields.nil?
|
1294
|
-
command.query['quotaUser'] = quota_user unless quota_user.nil?
|
1295
|
-
command.query['userIp'] = user_ip unless user_ip.nil?
|
1296
|
-
execute_or_queue_command(command, &block)
|
1297
|
-
end
|
1298
|
-
|
1299
|
-
# Exports read group sets to a BAM file in Google Cloud Storage.
|
1300
|
-
# Note that currently there may be some differences between exported BAM files
|
1301
|
-
# and the original BAM file at the time of import. In particular, comments in
|
1302
|
-
# the input file header will not be preserved, some custom tags will be
|
1303
|
-
# converted to strings, and original reference sequence order is not necessarily
|
1304
|
-
# preserved.
|
1305
|
-
# @param [Google::Apis::GenomicsV1beta2::ExportReadGroupSetsRequest] export_read_group_sets_request_object
|
1306
|
-
# @param [String] fields
|
1307
|
-
# Selector specifying which fields to include in a partial response.
|
1308
|
-
# @param [String] quota_user
|
1309
|
-
# Available to use for quota purposes for server-side applications. Can be any
|
1310
|
-
# arbitrary string assigned to a user, but should not exceed 40 characters.
|
1311
|
-
# Overrides userIp if both are provided.
|
1312
|
-
# @param [String] user_ip
|
1313
|
-
# IP address of the site where the request originates. Use this if you want to
|
1314
|
-
# enforce per-user limits.
|
1315
|
-
# @param [Google::Apis::RequestOptions] options
|
1316
|
-
# Request-specific options
|
1317
|
-
#
|
1318
|
-
# @yield [result, err] Result & error if block supplied
|
1319
|
-
# @yieldparam result [Google::Apis::GenomicsV1beta2::ExportReadGroupSetsResponse] parsed result object
|
1320
|
-
# @yieldparam err [StandardError] error object if request failed
|
1321
|
-
#
|
1322
|
-
# @return [Google::Apis::GenomicsV1beta2::ExportReadGroupSetsResponse]
|
1323
|
-
#
|
1324
|
-
# @raise [Google::Apis::ServerError] An error occurred on the server and the request can be retried
|
1325
|
-
# @raise [Google::Apis::ClientError] The request is invalid and should not be retried without modification
|
1326
|
-
# @raise [Google::Apis::AuthorizationError] Authorization is required
|
1327
|
-
def export_read_group_sets(export_read_group_sets_request_object = nil, fields: nil, quota_user: nil, user_ip: nil, options: nil, &block)
|
1328
|
-
path = 'readgroupsets/export'
|
1329
|
-
command = make_simple_command(:post, path, options)
|
1330
|
-
command.request_representation = Google::Apis::GenomicsV1beta2::ExportReadGroupSetsRequest::Representation
|
1331
|
-
command.request_object = export_read_group_sets_request_object
|
1332
|
-
command.response_representation = Google::Apis::GenomicsV1beta2::ExportReadGroupSetsResponse::Representation
|
1333
|
-
command.response_class = Google::Apis::GenomicsV1beta2::ExportReadGroupSetsResponse
|
1334
|
-
command.query['fields'] = fields unless fields.nil?
|
1335
|
-
command.query['quotaUser'] = quota_user unless quota_user.nil?
|
1336
|
-
command.query['userIp'] = user_ip unless user_ip.nil?
|
1337
|
-
execute_or_queue_command(command, &block)
|
1338
|
-
end
|
1339
|
-
|
1340
|
-
# Gets a read group set by ID.
|
1341
|
-
# @param [String] read_group_set_id
|
1342
|
-
# The ID of the read group set.
|
1343
|
-
# @param [String] fields
|
1344
|
-
# Selector specifying which fields to include in a partial response.
|
1345
|
-
# @param [String] quota_user
|
1346
|
-
# Available to use for quota purposes for server-side applications. Can be any
|
1347
|
-
# arbitrary string assigned to a user, but should not exceed 40 characters.
|
1348
|
-
# Overrides userIp if both are provided.
|
1349
|
-
# @param [String] user_ip
|
1350
|
-
# IP address of the site where the request originates. Use this if you want to
|
1351
|
-
# enforce per-user limits.
|
1352
|
-
# @param [Google::Apis::RequestOptions] options
|
1353
|
-
# Request-specific options
|
1354
|
-
#
|
1355
|
-
# @yield [result, err] Result & error if block supplied
|
1356
|
-
# @yieldparam result [Google::Apis::GenomicsV1beta2::ReadGroupSet] parsed result object
|
1357
|
-
# @yieldparam err [StandardError] error object if request failed
|
1358
|
-
#
|
1359
|
-
# @return [Google::Apis::GenomicsV1beta2::ReadGroupSet]
|
1360
|
-
#
|
1361
|
-
# @raise [Google::Apis::ServerError] An error occurred on the server and the request can be retried
|
1362
|
-
# @raise [Google::Apis::ClientError] The request is invalid and should not be retried without modification
|
1363
|
-
# @raise [Google::Apis::AuthorizationError] Authorization is required
|
1364
|
-
def get_read_group_set(read_group_set_id, fields: nil, quota_user: nil, user_ip: nil, options: nil, &block)
|
1365
|
-
path = 'readgroupsets/{readGroupSetId}'
|
1366
|
-
command = make_simple_command(:get, path, options)
|
1367
|
-
command.response_representation = Google::Apis::GenomicsV1beta2::ReadGroupSet::Representation
|
1368
|
-
command.response_class = Google::Apis::GenomicsV1beta2::ReadGroupSet
|
1369
|
-
command.params['readGroupSetId'] = read_group_set_id unless read_group_set_id.nil?
|
1370
|
-
command.query['fields'] = fields unless fields.nil?
|
1371
|
-
command.query['quotaUser'] = quota_user unless quota_user.nil?
|
1372
|
-
command.query['userIp'] = user_ip unless user_ip.nil?
|
1373
|
-
execute_or_queue_command(command, &block)
|
1374
|
-
end
|
1375
|
-
|
1376
|
-
# Creates read group sets by asynchronously importing the provided information.
|
1377
|
-
# Note that currently comments in the input file header are not imported and
|
1378
|
-
# some custom tags will be converted to strings, rather than preserving tag
|
1379
|
-
# types. The caller must have WRITE permissions to the dataset.
|
1380
|
-
# @param [Google::Apis::GenomicsV1beta2::ImportReadGroupSetsRequest] import_read_group_sets_request_object
|
1381
|
-
# @param [String] fields
|
1382
|
-
# Selector specifying which fields to include in a partial response.
|
1383
|
-
# @param [String] quota_user
|
1384
|
-
# Available to use for quota purposes for server-side applications. Can be any
|
1385
|
-
# arbitrary string assigned to a user, but should not exceed 40 characters.
|
1386
|
-
# Overrides userIp if both are provided.
|
1387
|
-
# @param [String] user_ip
|
1388
|
-
# IP address of the site where the request originates. Use this if you want to
|
1389
|
-
# enforce per-user limits.
|
1390
|
-
# @param [Google::Apis::RequestOptions] options
|
1391
|
-
# Request-specific options
|
1392
|
-
#
|
1393
|
-
# @yield [result, err] Result & error if block supplied
|
1394
|
-
# @yieldparam result [Google::Apis::GenomicsV1beta2::ImportReadGroupSetsResponse] parsed result object
|
1395
|
-
# @yieldparam err [StandardError] error object if request failed
|
1396
|
-
#
|
1397
|
-
# @return [Google::Apis::GenomicsV1beta2::ImportReadGroupSetsResponse]
|
1398
|
-
#
|
1399
|
-
# @raise [Google::Apis::ServerError] An error occurred on the server and the request can be retried
|
1400
|
-
# @raise [Google::Apis::ClientError] The request is invalid and should not be retried without modification
|
1401
|
-
# @raise [Google::Apis::AuthorizationError] Authorization is required
|
1402
|
-
def import_read_group_sets(import_read_group_sets_request_object = nil, fields: nil, quota_user: nil, user_ip: nil, options: nil, &block)
|
1403
|
-
path = 'readgroupsets/import'
|
1404
|
-
command = make_simple_command(:post, path, options)
|
1405
|
-
command.request_representation = Google::Apis::GenomicsV1beta2::ImportReadGroupSetsRequest::Representation
|
1406
|
-
command.request_object = import_read_group_sets_request_object
|
1407
|
-
command.response_representation = Google::Apis::GenomicsV1beta2::ImportReadGroupSetsResponse::Representation
|
1408
|
-
command.response_class = Google::Apis::GenomicsV1beta2::ImportReadGroupSetsResponse
|
1409
|
-
command.query['fields'] = fields unless fields.nil?
|
1410
|
-
command.query['quotaUser'] = quota_user unless quota_user.nil?
|
1411
|
-
command.query['userIp'] = user_ip unless user_ip.nil?
|
1412
|
-
execute_or_queue_command(command, &block)
|
1413
|
-
end
|
1414
|
-
|
1415
|
-
# Updates a read group set. This method supports patch semantics.
|
1416
|
-
# @param [String] read_group_set_id
|
1417
|
-
# The ID of the read group set to be updated. The caller must have WRITE
|
1418
|
-
# permissions to the dataset associated with this read group set.
|
1419
|
-
# @param [Google::Apis::GenomicsV1beta2::ReadGroupSet] read_group_set_object
|
1420
|
-
# @param [String] fields
|
1421
|
-
# Selector specifying which fields to include in a partial response.
|
1422
|
-
# @param [String] quota_user
|
1423
|
-
# Available to use for quota purposes for server-side applications. Can be any
|
1424
|
-
# arbitrary string assigned to a user, but should not exceed 40 characters.
|
1425
|
-
# Overrides userIp if both are provided.
|
1426
|
-
# @param [String] user_ip
|
1427
|
-
# IP address of the site where the request originates. Use this if you want to
|
1428
|
-
# enforce per-user limits.
|
1429
|
-
# @param [Google::Apis::RequestOptions] options
|
1430
|
-
# Request-specific options
|
1431
|
-
#
|
1432
|
-
# @yield [result, err] Result & error if block supplied
|
1433
|
-
# @yieldparam result [Google::Apis::GenomicsV1beta2::ReadGroupSet] parsed result object
|
1434
|
-
# @yieldparam err [StandardError] error object if request failed
|
1435
|
-
#
|
1436
|
-
# @return [Google::Apis::GenomicsV1beta2::ReadGroupSet]
|
1437
|
-
#
|
1438
|
-
# @raise [Google::Apis::ServerError] An error occurred on the server and the request can be retried
|
1439
|
-
# @raise [Google::Apis::ClientError] The request is invalid and should not be retried without modification
|
1440
|
-
# @raise [Google::Apis::AuthorizationError] Authorization is required
|
1441
|
-
def patch_read_group_set(read_group_set_id, read_group_set_object = nil, fields: nil, quota_user: nil, user_ip: nil, options: nil, &block)
|
1442
|
-
path = 'readgroupsets/{readGroupSetId}'
|
1443
|
-
command = make_simple_command(:patch, path, options)
|
1444
|
-
command.request_representation = Google::Apis::GenomicsV1beta2::ReadGroupSet::Representation
|
1445
|
-
command.request_object = read_group_set_object
|
1446
|
-
command.response_representation = Google::Apis::GenomicsV1beta2::ReadGroupSet::Representation
|
1447
|
-
command.response_class = Google::Apis::GenomicsV1beta2::ReadGroupSet
|
1448
|
-
command.params['readGroupSetId'] = read_group_set_id unless read_group_set_id.nil?
|
1449
|
-
command.query['fields'] = fields unless fields.nil?
|
1450
|
-
command.query['quotaUser'] = quota_user unless quota_user.nil?
|
1451
|
-
command.query['userIp'] = user_ip unless user_ip.nil?
|
1452
|
-
execute_or_queue_command(command, &block)
|
1453
|
-
end
|
1454
|
-
|
1455
|
-
# Searches for read group sets matching the criteria.
|
1456
|
-
# Implements GlobalAllianceApi.searchReadGroupSets.
|
1457
|
-
# @param [Google::Apis::GenomicsV1beta2::SearchReadGroupSetsRequest] search_read_group_sets_request_object
|
1458
|
-
# @param [String] fields
|
1459
|
-
# Selector specifying which fields to include in a partial response.
|
1460
|
-
# @param [String] quota_user
|
1461
|
-
# Available to use for quota purposes for server-side applications. Can be any
|
1462
|
-
# arbitrary string assigned to a user, but should not exceed 40 characters.
|
1463
|
-
# Overrides userIp if both are provided.
|
1464
|
-
# @param [String] user_ip
|
1465
|
-
# IP address of the site where the request originates. Use this if you want to
|
1466
|
-
# enforce per-user limits.
|
1467
|
-
# @param [Google::Apis::RequestOptions] options
|
1468
|
-
# Request-specific options
|
1469
|
-
#
|
1470
|
-
# @yield [result, err] Result & error if block supplied
|
1471
|
-
# @yieldparam result [Google::Apis::GenomicsV1beta2::SearchReadGroupSetsResponse] parsed result object
|
1472
|
-
# @yieldparam err [StandardError] error object if request failed
|
1473
|
-
#
|
1474
|
-
# @return [Google::Apis::GenomicsV1beta2::SearchReadGroupSetsResponse]
|
1475
|
-
#
|
1476
|
-
# @raise [Google::Apis::ServerError] An error occurred on the server and the request can be retried
|
1477
|
-
# @raise [Google::Apis::ClientError] The request is invalid and should not be retried without modification
|
1478
|
-
# @raise [Google::Apis::AuthorizationError] Authorization is required
|
1479
|
-
def search_read_group_sets(search_read_group_sets_request_object = nil, fields: nil, quota_user: nil, user_ip: nil, options: nil, &block)
|
1480
|
-
path = 'readgroupsets/search'
|
1481
|
-
command = make_simple_command(:post, path, options)
|
1482
|
-
command.request_representation = Google::Apis::GenomicsV1beta2::SearchReadGroupSetsRequest::Representation
|
1483
|
-
command.request_object = search_read_group_sets_request_object
|
1484
|
-
command.response_representation = Google::Apis::GenomicsV1beta2::SearchReadGroupSetsResponse::Representation
|
1485
|
-
command.response_class = Google::Apis::GenomicsV1beta2::SearchReadGroupSetsResponse
|
1486
|
-
command.query['fields'] = fields unless fields.nil?
|
1487
|
-
command.query['quotaUser'] = quota_user unless quota_user.nil?
|
1488
|
-
command.query['userIp'] = user_ip unless user_ip.nil?
|
1489
|
-
execute_or_queue_command(command, &block)
|
1490
|
-
end
|
1491
|
-
|
1492
|
-
# Updates a read group set.
|
1493
|
-
# @param [String] read_group_set_id
|
1494
|
-
# The ID of the read group set to be updated. The caller must have WRITE
|
1495
|
-
# permissions to the dataset associated with this read group set.
|
1496
|
-
# @param [Google::Apis::GenomicsV1beta2::ReadGroupSet] read_group_set_object
|
1497
|
-
# @param [String] fields
|
1498
|
-
# Selector specifying which fields to include in a partial response.
|
1499
|
-
# @param [String] quota_user
|
1500
|
-
# Available to use for quota purposes for server-side applications. Can be any
|
1501
|
-
# arbitrary string assigned to a user, but should not exceed 40 characters.
|
1502
|
-
# Overrides userIp if both are provided.
|
1503
|
-
# @param [String] user_ip
|
1504
|
-
# IP address of the site where the request originates. Use this if you want to
|
1505
|
-
# enforce per-user limits.
|
1506
|
-
# @param [Google::Apis::RequestOptions] options
|
1507
|
-
# Request-specific options
|
1508
|
-
#
|
1509
|
-
# @yield [result, err] Result & error if block supplied
|
1510
|
-
# @yieldparam result [Google::Apis::GenomicsV1beta2::ReadGroupSet] parsed result object
|
1511
|
-
# @yieldparam err [StandardError] error object if request failed
|
1512
|
-
#
|
1513
|
-
# @return [Google::Apis::GenomicsV1beta2::ReadGroupSet]
|
1514
|
-
#
|
1515
|
-
# @raise [Google::Apis::ServerError] An error occurred on the server and the request can be retried
|
1516
|
-
# @raise [Google::Apis::ClientError] The request is invalid and should not be retried without modification
|
1517
|
-
# @raise [Google::Apis::AuthorizationError] Authorization is required
|
1518
|
-
def update_read_group_set(read_group_set_id, read_group_set_object = nil, fields: nil, quota_user: nil, user_ip: nil, options: nil, &block)
|
1519
|
-
path = 'readgroupsets/{readGroupSetId}'
|
1520
|
-
command = make_simple_command(:put, path, options)
|
1521
|
-
command.request_representation = Google::Apis::GenomicsV1beta2::ReadGroupSet::Representation
|
1522
|
-
command.request_object = read_group_set_object
|
1523
|
-
command.response_representation = Google::Apis::GenomicsV1beta2::ReadGroupSet::Representation
|
1524
|
-
command.response_class = Google::Apis::GenomicsV1beta2::ReadGroupSet
|
1525
|
-
command.params['readGroupSetId'] = read_group_set_id unless read_group_set_id.nil?
|
1526
|
-
command.query['fields'] = fields unless fields.nil?
|
1527
|
-
command.query['quotaUser'] = quota_user unless quota_user.nil?
|
1528
|
-
command.query['userIp'] = user_ip unless user_ip.nil?
|
1529
|
-
execute_or_queue_command(command, &block)
|
1530
|
-
end
|
1531
|
-
|
1532
|
-
# Lists fixed width coverage buckets for a read group set, each of which
|
1533
|
-
# correspond to a range of a reference sequence. Each bucket summarizes coverage
|
1534
|
-
# information across its corresponding genomic range.
|
1535
|
-
# Coverage is defined as the number of reads which are aligned to a given base
|
1536
|
-
# in the reference sequence. Coverage buckets are available at several
|
1537
|
-
# precomputed bucket widths, enabling retrieval of various coverage 'zoom levels'
|
1538
|
-
# . The caller must have READ permissions for the target read group set.
|
1539
|
-
# @param [String] read_group_set_id
|
1540
|
-
# Required. The ID of the read group set over which coverage is requested.
|
1541
|
-
# @param [Fixnum] page_size
|
1542
|
-
# The maximum number of results to return in a single page. If unspecified,
|
1543
|
-
# defaults to 1024. The maximum value is 2048.
|
1544
|
-
# @param [String] page_token
|
1545
|
-
# The continuation token, which is used to page through large result sets. To
|
1546
|
-
# get the next page of results, set this parameter to the value of nextPageToken
|
1547
|
-
# from the previous response.
|
1548
|
-
# @param [String] range_end
|
1549
|
-
# The end position of the range on the reference, 0-based exclusive. If
|
1550
|
-
# specified, referenceName must also be specified.
|
1551
|
-
# @param [String] range_reference_name
|
1552
|
-
# The reference sequence name, for example chr1, 1, or chrX.
|
1553
|
-
# @param [String] range_start
|
1554
|
-
# The start position of the range on the reference, 0-based inclusive. If
|
1555
|
-
# specified, referenceName must also be specified.
|
1556
|
-
# @param [String] target_bucket_width
|
1557
|
-
# The desired width of each reported coverage bucket in base pairs. This will be
|
1558
|
-
# rounded down to the nearest precomputed bucket width; the value of which is
|
1559
|
-
# returned as bucketWidth in the response. Defaults to infinity (each bucket
|
1560
|
-
# spans an entire reference sequence) or the length of the target range, if
|
1561
|
-
# specified. The smallest precomputed bucketWidth is currently 2048 base pairs;
|
1562
|
-
# this is subject to change.
|
1563
|
-
# @param [String] fields
|
1564
|
-
# Selector specifying which fields to include in a partial response.
|
1565
|
-
# @param [String] quota_user
|
1566
|
-
# Available to use for quota purposes for server-side applications. Can be any
|
1567
|
-
# arbitrary string assigned to a user, but should not exceed 40 characters.
|
1568
|
-
# Overrides userIp if both are provided.
|
1569
|
-
# @param [String] user_ip
|
1570
|
-
# IP address of the site where the request originates. Use this if you want to
|
1571
|
-
# enforce per-user limits.
|
1572
|
-
# @param [Google::Apis::RequestOptions] options
|
1573
|
-
# Request-specific options
|
1574
|
-
#
|
1575
|
-
# @yield [result, err] Result & error if block supplied
|
1576
|
-
# @yieldparam result [Google::Apis::GenomicsV1beta2::ListCoverageBucketsResponse] parsed result object
|
1577
|
-
# @yieldparam err [StandardError] error object if request failed
|
1578
|
-
#
|
1579
|
-
# @return [Google::Apis::GenomicsV1beta2::ListCoverageBucketsResponse]
|
1580
|
-
#
|
1581
|
-
# @raise [Google::Apis::ServerError] An error occurred on the server and the request can be retried
|
1582
|
-
# @raise [Google::Apis::ClientError] The request is invalid and should not be retried without modification
|
1583
|
-
# @raise [Google::Apis::AuthorizationError] Authorization is required
|
1584
|
-
def list_coverage_buckets(read_group_set_id, page_size: nil, page_token: nil, range_end: nil, range_reference_name: nil, range_start: nil, target_bucket_width: nil, fields: nil, quota_user: nil, user_ip: nil, options: nil, &block)
|
1585
|
-
path = 'readgroupsets/{readGroupSetId}/coveragebuckets'
|
1586
|
-
command = make_simple_command(:get, path, options)
|
1587
|
-
command.response_representation = Google::Apis::GenomicsV1beta2::ListCoverageBucketsResponse::Representation
|
1588
|
-
command.response_class = Google::Apis::GenomicsV1beta2::ListCoverageBucketsResponse
|
1589
|
-
command.params['readGroupSetId'] = read_group_set_id unless read_group_set_id.nil?
|
1590
|
-
command.query['pageSize'] = page_size unless page_size.nil?
|
1591
|
-
command.query['pageToken'] = page_token unless page_token.nil?
|
1592
|
-
command.query['range.end'] = range_end unless range_end.nil?
|
1593
|
-
command.query['range.referenceName'] = range_reference_name unless range_reference_name.nil?
|
1594
|
-
command.query['range.start'] = range_start unless range_start.nil?
|
1595
|
-
command.query['targetBucketWidth'] = target_bucket_width unless target_bucket_width.nil?
|
1596
|
-
command.query['fields'] = fields unless fields.nil?
|
1597
|
-
command.query['quotaUser'] = quota_user unless quota_user.nil?
|
1598
|
-
command.query['userIp'] = user_ip unless user_ip.nil?
|
1599
|
-
execute_or_queue_command(command, &block)
|
1600
|
-
end
|
1601
|
-
|
1602
|
-
# Gets a list of reads for one or more read group sets. Reads search operates
|
1603
|
-
# over a genomic coordinate space of reference sequence & position defined over
|
1604
|
-
# the reference sequences to which the requested read group sets are aligned.
|
1605
|
-
# If a target positional range is specified, search returns all reads whose
|
1606
|
-
# alignment to the reference genome overlap the range. A query which specifies
|
1607
|
-
# only read group set IDs yields all reads in those read group sets, including
|
1608
|
-
# unmapped reads.
|
1609
|
-
# All reads returned (including reads on subsequent pages) are ordered by
|
1610
|
-
# genomic coordinate (reference sequence & position). Reads with equivalent
|
1611
|
-
# genomic coordinates are returned in a deterministic order.
|
1612
|
-
# Implements GlobalAllianceApi.searchReads.
|
1613
|
-
# @param [Google::Apis::GenomicsV1beta2::SearchReadsRequest] search_reads_request_object
|
1614
|
-
# @param [String] fields
|
1615
|
-
# Selector specifying which fields to include in a partial response.
|
1616
|
-
# @param [String] quota_user
|
1617
|
-
# Available to use for quota purposes for server-side applications. Can be any
|
1618
|
-
# arbitrary string assigned to a user, but should not exceed 40 characters.
|
1619
|
-
# Overrides userIp if both are provided.
|
1620
|
-
# @param [String] user_ip
|
1621
|
-
# IP address of the site where the request originates. Use this if you want to
|
1622
|
-
# enforce per-user limits.
|
1623
|
-
# @param [Google::Apis::RequestOptions] options
|
1624
|
-
# Request-specific options
|
1625
|
-
#
|
1626
|
-
# @yield [result, err] Result & error if block supplied
|
1627
|
-
# @yieldparam result [Google::Apis::GenomicsV1beta2::SearchReadsResponse] parsed result object
|
1628
|
-
# @yieldparam err [StandardError] error object if request failed
|
1629
|
-
#
|
1630
|
-
# @return [Google::Apis::GenomicsV1beta2::SearchReadsResponse]
|
1631
|
-
#
|
1632
|
-
# @raise [Google::Apis::ServerError] An error occurred on the server and the request can be retried
|
1633
|
-
# @raise [Google::Apis::ClientError] The request is invalid and should not be retried without modification
|
1634
|
-
# @raise [Google::Apis::AuthorizationError] Authorization is required
|
1635
|
-
def search_reads(search_reads_request_object = nil, fields: nil, quota_user: nil, user_ip: nil, options: nil, &block)
|
1636
|
-
path = 'reads/search'
|
1637
|
-
command = make_simple_command(:post, path, options)
|
1638
|
-
command.request_representation = Google::Apis::GenomicsV1beta2::SearchReadsRequest::Representation
|
1639
|
-
command.request_object = search_reads_request_object
|
1640
|
-
command.response_representation = Google::Apis::GenomicsV1beta2::SearchReadsResponse::Representation
|
1641
|
-
command.response_class = Google::Apis::GenomicsV1beta2::SearchReadsResponse
|
1642
|
-
command.query['fields'] = fields unless fields.nil?
|
1643
|
-
command.query['quotaUser'] = quota_user unless quota_user.nil?
|
1644
|
-
command.query['userIp'] = user_ip unless user_ip.nil?
|
1645
|
-
execute_or_queue_command(command, &block)
|
1646
|
-
end
|
1647
|
-
|
1648
|
-
# Gets a reference.
|
1649
|
-
# Implements GlobalAllianceApi.getReference.
|
1650
|
-
# @param [String] reference_id
|
1651
|
-
# The ID of the reference.
|
1652
|
-
# @param [String] fields
|
1653
|
-
# Selector specifying which fields to include in a partial response.
|
1654
|
-
# @param [String] quota_user
|
1655
|
-
# Available to use for quota purposes for server-side applications. Can be any
|
1656
|
-
# arbitrary string assigned to a user, but should not exceed 40 characters.
|
1657
|
-
# Overrides userIp if both are provided.
|
1658
|
-
# @param [String] user_ip
|
1659
|
-
# IP address of the site where the request originates. Use this if you want to
|
1660
|
-
# enforce per-user limits.
|
1661
|
-
# @param [Google::Apis::RequestOptions] options
|
1662
|
-
# Request-specific options
|
1663
|
-
#
|
1664
|
-
# @yield [result, err] Result & error if block supplied
|
1665
|
-
# @yieldparam result [Google::Apis::GenomicsV1beta2::Reference] parsed result object
|
1666
|
-
# @yieldparam err [StandardError] error object if request failed
|
1667
|
-
#
|
1668
|
-
# @return [Google::Apis::GenomicsV1beta2::Reference]
|
1669
|
-
#
|
1670
|
-
# @raise [Google::Apis::ServerError] An error occurred on the server and the request can be retried
|
1671
|
-
# @raise [Google::Apis::ClientError] The request is invalid and should not be retried without modification
|
1672
|
-
# @raise [Google::Apis::AuthorizationError] Authorization is required
|
1673
|
-
def get_reference(reference_id, fields: nil, quota_user: nil, user_ip: nil, options: nil, &block)
|
1674
|
-
path = 'references/{referenceId}'
|
1675
|
-
command = make_simple_command(:get, path, options)
|
1676
|
-
command.response_representation = Google::Apis::GenomicsV1beta2::Reference::Representation
|
1677
|
-
command.response_class = Google::Apis::GenomicsV1beta2::Reference
|
1678
|
-
command.params['referenceId'] = reference_id unless reference_id.nil?
|
1679
|
-
command.query['fields'] = fields unless fields.nil?
|
1680
|
-
command.query['quotaUser'] = quota_user unless quota_user.nil?
|
1681
|
-
command.query['userIp'] = user_ip unless user_ip.nil?
|
1682
|
-
execute_or_queue_command(command, &block)
|
1683
|
-
end
|
1684
|
-
|
1685
|
-
# Searches for references which match the given criteria.
|
1686
|
-
# Implements GlobalAllianceApi.searchReferences.
|
1687
|
-
# @param [Google::Apis::GenomicsV1beta2::SearchReferencesRequest] search_references_request_object
|
1688
|
-
# @param [String] fields
|
1689
|
-
# Selector specifying which fields to include in a partial response.
|
1690
|
-
# @param [String] quota_user
|
1691
|
-
# Available to use for quota purposes for server-side applications. Can be any
|
1692
|
-
# arbitrary string assigned to a user, but should not exceed 40 characters.
|
1693
|
-
# Overrides userIp if both are provided.
|
1694
|
-
# @param [String] user_ip
|
1695
|
-
# IP address of the site where the request originates. Use this if you want to
|
1696
|
-
# enforce per-user limits.
|
1697
|
-
# @param [Google::Apis::RequestOptions] options
|
1698
|
-
# Request-specific options
|
1699
|
-
#
|
1700
|
-
# @yield [result, err] Result & error if block supplied
|
1701
|
-
# @yieldparam result [Google::Apis::GenomicsV1beta2::SearchReferencesResponse] parsed result object
|
1702
|
-
# @yieldparam err [StandardError] error object if request failed
|
1703
|
-
#
|
1704
|
-
# @return [Google::Apis::GenomicsV1beta2::SearchReferencesResponse]
|
1705
|
-
#
|
1706
|
-
# @raise [Google::Apis::ServerError] An error occurred on the server and the request can be retried
|
1707
|
-
# @raise [Google::Apis::ClientError] The request is invalid and should not be retried without modification
|
1708
|
-
# @raise [Google::Apis::AuthorizationError] Authorization is required
|
1709
|
-
def search_references(search_references_request_object = nil, fields: nil, quota_user: nil, user_ip: nil, options: nil, &block)
|
1710
|
-
path = 'references/search'
|
1711
|
-
command = make_simple_command(:post, path, options)
|
1712
|
-
command.request_representation = Google::Apis::GenomicsV1beta2::SearchReferencesRequest::Representation
|
1713
|
-
command.request_object = search_references_request_object
|
1714
|
-
command.response_representation = Google::Apis::GenomicsV1beta2::SearchReferencesResponse::Representation
|
1715
|
-
command.response_class = Google::Apis::GenomicsV1beta2::SearchReferencesResponse
|
1716
|
-
command.query['fields'] = fields unless fields.nil?
|
1717
|
-
command.query['quotaUser'] = quota_user unless quota_user.nil?
|
1718
|
-
command.query['userIp'] = user_ip unless user_ip.nil?
|
1719
|
-
execute_or_queue_command(command, &block)
|
1720
|
-
end
|
1721
|
-
|
1722
|
-
# Lists the bases in a reference, optionally restricted to a range.
|
1723
|
-
# Implements GlobalAllianceApi.getReferenceBases.
|
1724
|
-
# @param [String] reference_id
|
1725
|
-
# The ID of the reference.
|
1726
|
-
# @param [String] end_position
|
1727
|
-
# The end position (0-based, exclusive) of this query. Defaults to the length of
|
1728
|
-
# this reference.
|
1729
|
-
# @param [Fixnum] page_size
|
1730
|
-
# Specifies the maximum number of bases to return in a single page.
|
1731
|
-
# @param [String] page_token
|
1732
|
-
# The continuation token, which is used to page through large result sets. To
|
1733
|
-
# get the next page of results, set this parameter to the value of nextPageToken
|
1734
|
-
# from the previous response.
|
1735
|
-
# @param [String] start_position
|
1736
|
-
# The start position (0-based) of this query. Defaults to 0.
|
1737
|
-
# @param [String] fields
|
1738
|
-
# Selector specifying which fields to include in a partial response.
|
1739
|
-
# @param [String] quota_user
|
1740
|
-
# Available to use for quota purposes for server-side applications. Can be any
|
1741
|
-
# arbitrary string assigned to a user, but should not exceed 40 characters.
|
1742
|
-
# Overrides userIp if both are provided.
|
1743
|
-
# @param [String] user_ip
|
1744
|
-
# IP address of the site where the request originates. Use this if you want to
|
1745
|
-
# enforce per-user limits.
|
1746
|
-
# @param [Google::Apis::RequestOptions] options
|
1747
|
-
# Request-specific options
|
1748
|
-
#
|
1749
|
-
# @yield [result, err] Result & error if block supplied
|
1750
|
-
# @yieldparam result [Google::Apis::GenomicsV1beta2::ListBasesResponse] parsed result object
|
1751
|
-
# @yieldparam err [StandardError] error object if request failed
|
1752
|
-
#
|
1753
|
-
# @return [Google::Apis::GenomicsV1beta2::ListBasesResponse]
|
1754
|
-
#
|
1755
|
-
# @raise [Google::Apis::ServerError] An error occurred on the server and the request can be retried
|
1756
|
-
# @raise [Google::Apis::ClientError] The request is invalid and should not be retried without modification
|
1757
|
-
# @raise [Google::Apis::AuthorizationError] Authorization is required
|
1758
|
-
def list_reference_bases(reference_id, end_position: nil, page_size: nil, page_token: nil, start_position: nil, fields: nil, quota_user: nil, user_ip: nil, options: nil, &block)
|
1759
|
-
path = 'references/{referenceId}/bases'
|
1760
|
-
command = make_simple_command(:get, path, options)
|
1761
|
-
command.response_representation = Google::Apis::GenomicsV1beta2::ListBasesResponse::Representation
|
1762
|
-
command.response_class = Google::Apis::GenomicsV1beta2::ListBasesResponse
|
1763
|
-
command.params['referenceId'] = reference_id unless reference_id.nil?
|
1764
|
-
command.query['end'] = end_position unless end_position.nil?
|
1765
|
-
command.query['pageSize'] = page_size unless page_size.nil?
|
1766
|
-
command.query['pageToken'] = page_token unless page_token.nil?
|
1767
|
-
command.query['start'] = start_position unless start_position.nil?
|
1768
|
-
command.query['fields'] = fields unless fields.nil?
|
1769
|
-
command.query['quotaUser'] = quota_user unless quota_user.nil?
|
1770
|
-
command.query['userIp'] = user_ip unless user_ip.nil?
|
1771
|
-
execute_or_queue_command(command, &block)
|
1772
|
-
end
|
1773
|
-
|
1774
|
-
# Gets a reference set.
|
1775
|
-
# Implements GlobalAllianceApi.getReferenceSet.
|
1776
|
-
# @param [String] reference_set_id
|
1777
|
-
# The ID of the reference set.
|
1778
|
-
# @param [String] fields
|
1779
|
-
# Selector specifying which fields to include in a partial response.
|
1780
|
-
# @param [String] quota_user
|
1781
|
-
# Available to use for quota purposes for server-side applications. Can be any
|
1782
|
-
# arbitrary string assigned to a user, but should not exceed 40 characters.
|
1783
|
-
# Overrides userIp if both are provided.
|
1784
|
-
# @param [String] user_ip
|
1785
|
-
# IP address of the site where the request originates. Use this if you want to
|
1786
|
-
# enforce per-user limits.
|
1787
|
-
# @param [Google::Apis::RequestOptions] options
|
1788
|
-
# Request-specific options
|
1789
|
-
#
|
1790
|
-
# @yield [result, err] Result & error if block supplied
|
1791
|
-
# @yieldparam result [Google::Apis::GenomicsV1beta2::ReferenceSet] parsed result object
|
1792
|
-
# @yieldparam err [StandardError] error object if request failed
|
1793
|
-
#
|
1794
|
-
# @return [Google::Apis::GenomicsV1beta2::ReferenceSet]
|
1795
|
-
#
|
1796
|
-
# @raise [Google::Apis::ServerError] An error occurred on the server and the request can be retried
|
1797
|
-
# @raise [Google::Apis::ClientError] The request is invalid and should not be retried without modification
|
1798
|
-
# @raise [Google::Apis::AuthorizationError] Authorization is required
|
1799
|
-
def get_reference_set(reference_set_id, fields: nil, quota_user: nil, user_ip: nil, options: nil, &block)
|
1800
|
-
path = 'referencesets/{referenceSetId}'
|
1801
|
-
command = make_simple_command(:get, path, options)
|
1802
|
-
command.response_representation = Google::Apis::GenomicsV1beta2::ReferenceSet::Representation
|
1803
|
-
command.response_class = Google::Apis::GenomicsV1beta2::ReferenceSet
|
1804
|
-
command.params['referenceSetId'] = reference_set_id unless reference_set_id.nil?
|
1805
|
-
command.query['fields'] = fields unless fields.nil?
|
1806
|
-
command.query['quotaUser'] = quota_user unless quota_user.nil?
|
1807
|
-
command.query['userIp'] = user_ip unless user_ip.nil?
|
1808
|
-
execute_or_queue_command(command, &block)
|
1809
|
-
end
|
1810
|
-
|
1811
|
-
# Searches for reference sets which match the given criteria.
|
1812
|
-
# Implements GlobalAllianceApi.searchReferenceSets.
|
1813
|
-
# @param [Google::Apis::GenomicsV1beta2::SearchReferenceSetsRequest] search_reference_sets_request_object
|
1814
|
-
# @param [String] fields
|
1815
|
-
# Selector specifying which fields to include in a partial response.
|
1816
|
-
# @param [String] quota_user
|
1817
|
-
# Available to use for quota purposes for server-side applications. Can be any
|
1818
|
-
# arbitrary string assigned to a user, but should not exceed 40 characters.
|
1819
|
-
# Overrides userIp if both are provided.
|
1820
|
-
# @param [String] user_ip
|
1821
|
-
# IP address of the site where the request originates. Use this if you want to
|
1822
|
-
# enforce per-user limits.
|
1823
|
-
# @param [Google::Apis::RequestOptions] options
|
1824
|
-
# Request-specific options
|
1825
|
-
#
|
1826
|
-
# @yield [result, err] Result & error if block supplied
|
1827
|
-
# @yieldparam result [Google::Apis::GenomicsV1beta2::SearchReferenceSetsResponse] parsed result object
|
1828
|
-
# @yieldparam err [StandardError] error object if request failed
|
1829
|
-
#
|
1830
|
-
# @return [Google::Apis::GenomicsV1beta2::SearchReferenceSetsResponse]
|
1831
|
-
#
|
1832
|
-
# @raise [Google::Apis::ServerError] An error occurred on the server and the request can be retried
|
1833
|
-
# @raise [Google::Apis::ClientError] The request is invalid and should not be retried without modification
|
1834
|
-
# @raise [Google::Apis::AuthorizationError] Authorization is required
|
1835
|
-
def search_reference_sets(search_reference_sets_request_object = nil, fields: nil, quota_user: nil, user_ip: nil, options: nil, &block)
|
1836
|
-
path = 'referencesets/search'
|
1837
|
-
command = make_simple_command(:post, path, options)
|
1838
|
-
command.request_representation = Google::Apis::GenomicsV1beta2::SearchReferenceSetsRequest::Representation
|
1839
|
-
command.request_object = search_reference_sets_request_object
|
1840
|
-
command.response_representation = Google::Apis::GenomicsV1beta2::SearchReferenceSetsResponse::Representation
|
1841
|
-
command.response_class = Google::Apis::GenomicsV1beta2::SearchReferenceSetsResponse
|
1842
|
-
command.query['fields'] = fields unless fields.nil?
|
1843
|
-
command.query['quotaUser'] = quota_user unless quota_user.nil?
|
1844
|
-
command.query['userIp'] = user_ip unless user_ip.nil?
|
1845
|
-
execute_or_queue_command(command, &block)
|
1846
|
-
end
|
1847
|
-
|
1848
|
-
# Creates a new variant.
|
1849
|
-
# @param [Google::Apis::GenomicsV1beta2::Variant] variant_object
|
1850
|
-
# @param [String] fields
|
1851
|
-
# Selector specifying which fields to include in a partial response.
|
1852
|
-
# @param [String] quota_user
|
1853
|
-
# Available to use for quota purposes for server-side applications. Can be any
|
1854
|
-
# arbitrary string assigned to a user, but should not exceed 40 characters.
|
1855
|
-
# Overrides userIp if both are provided.
|
1856
|
-
# @param [String] user_ip
|
1857
|
-
# IP address of the site where the request originates. Use this if you want to
|
1858
|
-
# enforce per-user limits.
|
1859
|
-
# @param [Google::Apis::RequestOptions] options
|
1860
|
-
# Request-specific options
|
1861
|
-
#
|
1862
|
-
# @yield [result, err] Result & error if block supplied
|
1863
|
-
# @yieldparam result [Google::Apis::GenomicsV1beta2::Variant] parsed result object
|
1864
|
-
# @yieldparam err [StandardError] error object if request failed
|
1865
|
-
#
|
1866
|
-
# @return [Google::Apis::GenomicsV1beta2::Variant]
|
1867
|
-
#
|
1868
|
-
# @raise [Google::Apis::ServerError] An error occurred on the server and the request can be retried
|
1869
|
-
# @raise [Google::Apis::ClientError] The request is invalid and should not be retried without modification
|
1870
|
-
# @raise [Google::Apis::AuthorizationError] Authorization is required
|
1871
|
-
def create_variant(variant_object = nil, fields: nil, quota_user: nil, user_ip: nil, options: nil, &block)
|
1872
|
-
path = 'variants'
|
1873
|
-
command = make_simple_command(:post, path, options)
|
1874
|
-
command.request_representation = Google::Apis::GenomicsV1beta2::Variant::Representation
|
1875
|
-
command.request_object = variant_object
|
1876
|
-
command.response_representation = Google::Apis::GenomicsV1beta2::Variant::Representation
|
1877
|
-
command.response_class = Google::Apis::GenomicsV1beta2::Variant
|
1878
|
-
command.query['fields'] = fields unless fields.nil?
|
1879
|
-
command.query['quotaUser'] = quota_user unless quota_user.nil?
|
1880
|
-
command.query['userIp'] = user_ip unless user_ip.nil?
|
1881
|
-
execute_or_queue_command(command, &block)
|
1882
|
-
end
|
1883
|
-
|
1884
|
-
# Deletes a variant.
|
1885
|
-
# @param [String] variant_id
|
1886
|
-
# The ID of the variant to be deleted.
|
1887
|
-
# @param [String] fields
|
1888
|
-
# Selector specifying which fields to include in a partial response.
|
1889
|
-
# @param [String] quota_user
|
1890
|
-
# Available to use for quota purposes for server-side applications. Can be any
|
1891
|
-
# arbitrary string assigned to a user, but should not exceed 40 characters.
|
1892
|
-
# Overrides userIp if both are provided.
|
1893
|
-
# @param [String] user_ip
|
1894
|
-
# IP address of the site where the request originates. Use this if you want to
|
1895
|
-
# enforce per-user limits.
|
1896
|
-
# @param [Google::Apis::RequestOptions] options
|
1897
|
-
# Request-specific options
|
1898
|
-
#
|
1899
|
-
# @yield [result, err] Result & error if block supplied
|
1900
|
-
# @yieldparam result [NilClass] No result returned for this method
|
1901
|
-
# @yieldparam err [StandardError] error object if request failed
|
1902
|
-
#
|
1903
|
-
# @return [void]
|
1904
|
-
#
|
1905
|
-
# @raise [Google::Apis::ServerError] An error occurred on the server and the request can be retried
|
1906
|
-
# @raise [Google::Apis::ClientError] The request is invalid and should not be retried without modification
|
1907
|
-
# @raise [Google::Apis::AuthorizationError] Authorization is required
|
1908
|
-
def delete_variant(variant_id, fields: nil, quota_user: nil, user_ip: nil, options: nil, &block)
|
1909
|
-
path = 'variants/{variantId}'
|
1910
|
-
command = make_simple_command(:delete, path, options)
|
1911
|
-
command.params['variantId'] = variant_id unless variant_id.nil?
|
1912
|
-
command.query['fields'] = fields unless fields.nil?
|
1913
|
-
command.query['quotaUser'] = quota_user unless quota_user.nil?
|
1914
|
-
command.query['userIp'] = user_ip unless user_ip.nil?
|
1915
|
-
execute_or_queue_command(command, &block)
|
1916
|
-
end
|
1917
|
-
|
1918
|
-
# Gets a variant by ID.
|
1919
|
-
# @param [String] variant_id
|
1920
|
-
# The ID of the variant.
|
1921
|
-
# @param [String] fields
|
1922
|
-
# Selector specifying which fields to include in a partial response.
|
1923
|
-
# @param [String] quota_user
|
1924
|
-
# Available to use for quota purposes for server-side applications. Can be any
|
1925
|
-
# arbitrary string assigned to a user, but should not exceed 40 characters.
|
1926
|
-
# Overrides userIp if both are provided.
|
1927
|
-
# @param [String] user_ip
|
1928
|
-
# IP address of the site where the request originates. Use this if you want to
|
1929
|
-
# enforce per-user limits.
|
1930
|
-
# @param [Google::Apis::RequestOptions] options
|
1931
|
-
# Request-specific options
|
1932
|
-
#
|
1933
|
-
# @yield [result, err] Result & error if block supplied
|
1934
|
-
# @yieldparam result [Google::Apis::GenomicsV1beta2::Variant] parsed result object
|
1935
|
-
# @yieldparam err [StandardError] error object if request failed
|
1936
|
-
#
|
1937
|
-
# @return [Google::Apis::GenomicsV1beta2::Variant]
|
1938
|
-
#
|
1939
|
-
# @raise [Google::Apis::ServerError] An error occurred on the server and the request can be retried
|
1940
|
-
# @raise [Google::Apis::ClientError] The request is invalid and should not be retried without modification
|
1941
|
-
# @raise [Google::Apis::AuthorizationError] Authorization is required
|
1942
|
-
def get_variant(variant_id, fields: nil, quota_user: nil, user_ip: nil, options: nil, &block)
|
1943
|
-
path = 'variants/{variantId}'
|
1944
|
-
command = make_simple_command(:get, path, options)
|
1945
|
-
command.response_representation = Google::Apis::GenomicsV1beta2::Variant::Representation
|
1946
|
-
command.response_class = Google::Apis::GenomicsV1beta2::Variant
|
1947
|
-
command.params['variantId'] = variant_id unless variant_id.nil?
|
1948
|
-
command.query['fields'] = fields unless fields.nil?
|
1949
|
-
command.query['quotaUser'] = quota_user unless quota_user.nil?
|
1950
|
-
command.query['userIp'] = user_ip unless user_ip.nil?
|
1951
|
-
execute_or_queue_command(command, &block)
|
1952
|
-
end
|
1953
|
-
|
1954
|
-
# Gets a list of variants matching the criteria.
|
1955
|
-
# Implements GlobalAllianceApi.searchVariants.
|
1956
|
-
# @param [Google::Apis::GenomicsV1beta2::SearchVariantsRequest] search_variants_request_object
|
1957
|
-
# @param [String] fields
|
1958
|
-
# Selector specifying which fields to include in a partial response.
|
1959
|
-
# @param [String] quota_user
|
1960
|
-
# Available to use for quota purposes for server-side applications. Can be any
|
1961
|
-
# arbitrary string assigned to a user, but should not exceed 40 characters.
|
1962
|
-
# Overrides userIp if both are provided.
|
1963
|
-
# @param [String] user_ip
|
1964
|
-
# IP address of the site where the request originates. Use this if you want to
|
1965
|
-
# enforce per-user limits.
|
1966
|
-
# @param [Google::Apis::RequestOptions] options
|
1967
|
-
# Request-specific options
|
1968
|
-
#
|
1969
|
-
# @yield [result, err] Result & error if block supplied
|
1970
|
-
# @yieldparam result [Google::Apis::GenomicsV1beta2::SearchVariantsResponse] parsed result object
|
1971
|
-
# @yieldparam err [StandardError] error object if request failed
|
1972
|
-
#
|
1973
|
-
# @return [Google::Apis::GenomicsV1beta2::SearchVariantsResponse]
|
1974
|
-
#
|
1975
|
-
# @raise [Google::Apis::ServerError] An error occurred on the server and the request can be retried
|
1976
|
-
# @raise [Google::Apis::ClientError] The request is invalid and should not be retried without modification
|
1977
|
-
# @raise [Google::Apis::AuthorizationError] Authorization is required
|
1978
|
-
def search_variants(search_variants_request_object = nil, fields: nil, quota_user: nil, user_ip: nil, options: nil, &block)
|
1979
|
-
path = 'variants/search'
|
1980
|
-
command = make_simple_command(:post, path, options)
|
1981
|
-
command.request_representation = Google::Apis::GenomicsV1beta2::SearchVariantsRequest::Representation
|
1982
|
-
command.request_object = search_variants_request_object
|
1983
|
-
command.response_representation = Google::Apis::GenomicsV1beta2::SearchVariantsResponse::Representation
|
1984
|
-
command.response_class = Google::Apis::GenomicsV1beta2::SearchVariantsResponse
|
1985
|
-
command.query['fields'] = fields unless fields.nil?
|
1986
|
-
command.query['quotaUser'] = quota_user unless quota_user.nil?
|
1987
|
-
command.query['userIp'] = user_ip unless user_ip.nil?
|
1988
|
-
execute_or_queue_command(command, &block)
|
1989
|
-
end
|
1990
|
-
|
1991
|
-
# Updates a variant's names and info fields. All other modifications are
|
1992
|
-
# silently ignored. Returns the modified variant without its calls.
|
1993
|
-
# @param [String] variant_id
|
1994
|
-
# The ID of the variant to be updated.
|
1995
|
-
# @param [Google::Apis::GenomicsV1beta2::Variant] variant_object
|
1996
|
-
# @param [String] fields
|
1997
|
-
# Selector specifying which fields to include in a partial response.
|
1998
|
-
# @param [String] quota_user
|
1999
|
-
# Available to use for quota purposes for server-side applications. Can be any
|
2000
|
-
# arbitrary string assigned to a user, but should not exceed 40 characters.
|
2001
|
-
# Overrides userIp if both are provided.
|
2002
|
-
# @param [String] user_ip
|
2003
|
-
# IP address of the site where the request originates. Use this if you want to
|
2004
|
-
# enforce per-user limits.
|
2005
|
-
# @param [Google::Apis::RequestOptions] options
|
2006
|
-
# Request-specific options
|
2007
|
-
#
|
2008
|
-
# @yield [result, err] Result & error if block supplied
|
2009
|
-
# @yieldparam result [Google::Apis::GenomicsV1beta2::Variant] parsed result object
|
2010
|
-
# @yieldparam err [StandardError] error object if request failed
|
2011
|
-
#
|
2012
|
-
# @return [Google::Apis::GenomicsV1beta2::Variant]
|
2013
|
-
#
|
2014
|
-
# @raise [Google::Apis::ServerError] An error occurred on the server and the request can be retried
|
2015
|
-
# @raise [Google::Apis::ClientError] The request is invalid and should not be retried without modification
|
2016
|
-
# @raise [Google::Apis::AuthorizationError] Authorization is required
|
2017
|
-
def update_variant(variant_id, variant_object = nil, fields: nil, quota_user: nil, user_ip: nil, options: nil, &block)
|
2018
|
-
path = 'variants/{variantId}'
|
2019
|
-
command = make_simple_command(:put, path, options)
|
2020
|
-
command.request_representation = Google::Apis::GenomicsV1beta2::Variant::Representation
|
2021
|
-
command.request_object = variant_object
|
2022
|
-
command.response_representation = Google::Apis::GenomicsV1beta2::Variant::Representation
|
2023
|
-
command.response_class = Google::Apis::GenomicsV1beta2::Variant
|
2024
|
-
command.params['variantId'] = variant_id unless variant_id.nil?
|
2025
|
-
command.query['fields'] = fields unless fields.nil?
|
2026
|
-
command.query['quotaUser'] = quota_user unless quota_user.nil?
|
2027
|
-
command.query['userIp'] = user_ip unless user_ip.nil?
|
2028
|
-
execute_or_queue_command(command, &block)
|
2029
|
-
end
|
2030
|
-
|
2031
|
-
# Creates a new variant set (only necessary in v1).
|
2032
|
-
# @param [Google::Apis::GenomicsV1beta2::VariantSet] variant_set_object
|
2033
|
-
# @param [String] fields
|
2034
|
-
# Selector specifying which fields to include in a partial response.
|
2035
|
-
# @param [String] quota_user
|
2036
|
-
# Available to use for quota purposes for server-side applications. Can be any
|
2037
|
-
# arbitrary string assigned to a user, but should not exceed 40 characters.
|
2038
|
-
# Overrides userIp if both are provided.
|
2039
|
-
# @param [String] user_ip
|
2040
|
-
# IP address of the site where the request originates. Use this if you want to
|
2041
|
-
# enforce per-user limits.
|
2042
|
-
# @param [Google::Apis::RequestOptions] options
|
2043
|
-
# Request-specific options
|
2044
|
-
#
|
2045
|
-
# @yield [result, err] Result & error if block supplied
|
2046
|
-
# @yieldparam result [Google::Apis::GenomicsV1beta2::VariantSet] parsed result object
|
2047
|
-
# @yieldparam err [StandardError] error object if request failed
|
2048
|
-
#
|
2049
|
-
# @return [Google::Apis::GenomicsV1beta2::VariantSet]
|
2050
|
-
#
|
2051
|
-
# @raise [Google::Apis::ServerError] An error occurred on the server and the request can be retried
|
2052
|
-
# @raise [Google::Apis::ClientError] The request is invalid and should not be retried without modification
|
2053
|
-
# @raise [Google::Apis::AuthorizationError] Authorization is required
|
2054
|
-
def create_variantset(variant_set_object = nil, fields: nil, quota_user: nil, user_ip: nil, options: nil, &block)
|
2055
|
-
path = 'variantsets'
|
2056
|
-
command = make_simple_command(:post, path, options)
|
2057
|
-
command.request_representation = Google::Apis::GenomicsV1beta2::VariantSet::Representation
|
2058
|
-
command.request_object = variant_set_object
|
2059
|
-
command.response_representation = Google::Apis::GenomicsV1beta2::VariantSet::Representation
|
2060
|
-
command.response_class = Google::Apis::GenomicsV1beta2::VariantSet
|
2061
|
-
command.query['fields'] = fields unless fields.nil?
|
2062
|
-
command.query['quotaUser'] = quota_user unless quota_user.nil?
|
2063
|
-
command.query['userIp'] = user_ip unless user_ip.nil?
|
2064
|
-
execute_or_queue_command(command, &block)
|
2065
|
-
end
|
2066
|
-
|
2067
|
-
# Deletes the contents of a variant set. The variant set object is not deleted.
|
2068
|
-
# @param [String] variant_set_id
|
2069
|
-
# The ID of the variant set to be deleted.
|
2070
|
-
# @param [String] fields
|
2071
|
-
# Selector specifying which fields to include in a partial response.
|
2072
|
-
# @param [String] quota_user
|
2073
|
-
# Available to use for quota purposes for server-side applications. Can be any
|
2074
|
-
# arbitrary string assigned to a user, but should not exceed 40 characters.
|
2075
|
-
# Overrides userIp if both are provided.
|
2076
|
-
# @param [String] user_ip
|
2077
|
-
# IP address of the site where the request originates. Use this if you want to
|
2078
|
-
# enforce per-user limits.
|
2079
|
-
# @param [Google::Apis::RequestOptions] options
|
2080
|
-
# Request-specific options
|
2081
|
-
#
|
2082
|
-
# @yield [result, err] Result & error if block supplied
|
2083
|
-
# @yieldparam result [NilClass] No result returned for this method
|
2084
|
-
# @yieldparam err [StandardError] error object if request failed
|
2085
|
-
#
|
2086
|
-
# @return [void]
|
2087
|
-
#
|
2088
|
-
# @raise [Google::Apis::ServerError] An error occurred on the server and the request can be retried
|
2089
|
-
# @raise [Google::Apis::ClientError] The request is invalid and should not be retried without modification
|
2090
|
-
# @raise [Google::Apis::AuthorizationError] Authorization is required
|
2091
|
-
def delete_variantset(variant_set_id, fields: nil, quota_user: nil, user_ip: nil, options: nil, &block)
|
2092
|
-
path = 'variantsets/{variantSetId}'
|
2093
|
-
command = make_simple_command(:delete, path, options)
|
2094
|
-
command.params['variantSetId'] = variant_set_id unless variant_set_id.nil?
|
2095
|
-
command.query['fields'] = fields unless fields.nil?
|
2096
|
-
command.query['quotaUser'] = quota_user unless quota_user.nil?
|
2097
|
-
command.query['userIp'] = user_ip unless user_ip.nil?
|
2098
|
-
execute_or_queue_command(command, &block)
|
2099
|
-
end
|
2100
|
-
|
2101
|
-
# Exports variant set data to an external destination.
|
2102
|
-
# @param [String] variant_set_id
|
2103
|
-
# Required. The ID of the variant set that contains variant data which should be
|
2104
|
-
# exported. The caller must have READ access to this variant set.
|
2105
|
-
# @param [Google::Apis::GenomicsV1beta2::ExportVariantSetRequest] export_variant_set_request_object
|
2106
|
-
# @param [String] fields
|
2107
|
-
# Selector specifying which fields to include in a partial response.
|
2108
|
-
# @param [String] quota_user
|
2109
|
-
# Available to use for quota purposes for server-side applications. Can be any
|
2110
|
-
# arbitrary string assigned to a user, but should not exceed 40 characters.
|
2111
|
-
# Overrides userIp if both are provided.
|
2112
|
-
# @param [String] user_ip
|
2113
|
-
# IP address of the site where the request originates. Use this if you want to
|
2114
|
-
# enforce per-user limits.
|
2115
|
-
# @param [Google::Apis::RequestOptions] options
|
2116
|
-
# Request-specific options
|
2117
|
-
#
|
2118
|
-
# @yield [result, err] Result & error if block supplied
|
2119
|
-
# @yieldparam result [Google::Apis::GenomicsV1beta2::ExportVariantSetResponse] parsed result object
|
2120
|
-
# @yieldparam err [StandardError] error object if request failed
|
2121
|
-
#
|
2122
|
-
# @return [Google::Apis::GenomicsV1beta2::ExportVariantSetResponse]
|
2123
|
-
#
|
2124
|
-
# @raise [Google::Apis::ServerError] An error occurred on the server and the request can be retried
|
2125
|
-
# @raise [Google::Apis::ClientError] The request is invalid and should not be retried without modification
|
2126
|
-
# @raise [Google::Apis::AuthorizationError] Authorization is required
|
2127
|
-
def export_variant_set(variant_set_id, export_variant_set_request_object = nil, fields: nil, quota_user: nil, user_ip: nil, options: nil, &block)
|
2128
|
-
path = 'variantsets/{variantSetId}/export'
|
2129
|
-
command = make_simple_command(:post, path, options)
|
2130
|
-
command.request_representation = Google::Apis::GenomicsV1beta2::ExportVariantSetRequest::Representation
|
2131
|
-
command.request_object = export_variant_set_request_object
|
2132
|
-
command.response_representation = Google::Apis::GenomicsV1beta2::ExportVariantSetResponse::Representation
|
2133
|
-
command.response_class = Google::Apis::GenomicsV1beta2::ExportVariantSetResponse
|
2134
|
-
command.params['variantSetId'] = variant_set_id unless variant_set_id.nil?
|
2135
|
-
command.query['fields'] = fields unless fields.nil?
|
2136
|
-
command.query['quotaUser'] = quota_user unless quota_user.nil?
|
2137
|
-
command.query['userIp'] = user_ip unless user_ip.nil?
|
2138
|
-
execute_or_queue_command(command, &block)
|
2139
|
-
end
|
2140
|
-
|
2141
|
-
# Gets a variant set by ID.
|
2142
|
-
# @param [String] variant_set_id
|
2143
|
-
# Required. The ID of the variant set.
|
2144
|
-
# @param [String] fields
|
2145
|
-
# Selector specifying which fields to include in a partial response.
|
2146
|
-
# @param [String] quota_user
|
2147
|
-
# Available to use for quota purposes for server-side applications. Can be any
|
2148
|
-
# arbitrary string assigned to a user, but should not exceed 40 characters.
|
2149
|
-
# Overrides userIp if both are provided.
|
2150
|
-
# @param [String] user_ip
|
2151
|
-
# IP address of the site where the request originates. Use this if you want to
|
2152
|
-
# enforce per-user limits.
|
2153
|
-
# @param [Google::Apis::RequestOptions] options
|
2154
|
-
# Request-specific options
|
2155
|
-
#
|
2156
|
-
# @yield [result, err] Result & error if block supplied
|
2157
|
-
# @yieldparam result [Google::Apis::GenomicsV1beta2::VariantSet] parsed result object
|
2158
|
-
# @yieldparam err [StandardError] error object if request failed
|
2159
|
-
#
|
2160
|
-
# @return [Google::Apis::GenomicsV1beta2::VariantSet]
|
2161
|
-
#
|
2162
|
-
# @raise [Google::Apis::ServerError] An error occurred on the server and the request can be retried
|
2163
|
-
# @raise [Google::Apis::ClientError] The request is invalid and should not be retried without modification
|
2164
|
-
# @raise [Google::Apis::AuthorizationError] Authorization is required
|
2165
|
-
def get_variantset(variant_set_id, fields: nil, quota_user: nil, user_ip: nil, options: nil, &block)
|
2166
|
-
path = 'variantsets/{variantSetId}'
|
2167
|
-
command = make_simple_command(:get, path, options)
|
2168
|
-
command.response_representation = Google::Apis::GenomicsV1beta2::VariantSet::Representation
|
2169
|
-
command.response_class = Google::Apis::GenomicsV1beta2::VariantSet
|
2170
|
-
command.params['variantSetId'] = variant_set_id unless variant_set_id.nil?
|
2171
|
-
command.query['fields'] = fields unless fields.nil?
|
2172
|
-
command.query['quotaUser'] = quota_user unless quota_user.nil?
|
2173
|
-
command.query['userIp'] = user_ip unless user_ip.nil?
|
2174
|
-
execute_or_queue_command(command, &block)
|
2175
|
-
end
|
2176
|
-
|
2177
|
-
# Creates variant data by asynchronously importing the provided information.
|
2178
|
-
# The variants for import will be merged with any existing data and each other
|
2179
|
-
# according to the behavior of mergeVariants. In particular, this means for
|
2180
|
-
# merged VCF variants that have conflicting INFO fields, some data will be
|
2181
|
-
# arbitrarily discarded. As a special case, for single-sample VCF files, QUAL
|
2182
|
-
# and FILTER fields will be moved to the call level; these are sometimes
|
2183
|
-
# interpreted in a call-specific context. Imported VCF headers are appended to
|
2184
|
-
# the metadata already in a variant set.
|
2185
|
-
# @param [String] variant_set_id
|
2186
|
-
# Required. The variant set to which variant data should be imported.
|
2187
|
-
# @param [Google::Apis::GenomicsV1beta2::ImportVariantsRequest] import_variants_request_object
|
2188
|
-
# @param [String] fields
|
2189
|
-
# Selector specifying which fields to include in a partial response.
|
2190
|
-
# @param [String] quota_user
|
2191
|
-
# Available to use for quota purposes for server-side applications. Can be any
|
2192
|
-
# arbitrary string assigned to a user, but should not exceed 40 characters.
|
2193
|
-
# Overrides userIp if both are provided.
|
2194
|
-
# @param [String] user_ip
|
2195
|
-
# IP address of the site where the request originates. Use this if you want to
|
2196
|
-
# enforce per-user limits.
|
2197
|
-
# @param [Google::Apis::RequestOptions] options
|
2198
|
-
# Request-specific options
|
2199
|
-
#
|
2200
|
-
# @yield [result, err] Result & error if block supplied
|
2201
|
-
# @yieldparam result [Google::Apis::GenomicsV1beta2::ImportVariantsResponse] parsed result object
|
2202
|
-
# @yieldparam err [StandardError] error object if request failed
|
2203
|
-
#
|
2204
|
-
# @return [Google::Apis::GenomicsV1beta2::ImportVariantsResponse]
|
2205
|
-
#
|
2206
|
-
# @raise [Google::Apis::ServerError] An error occurred on the server and the request can be retried
|
2207
|
-
# @raise [Google::Apis::ClientError] The request is invalid and should not be retried without modification
|
2208
|
-
# @raise [Google::Apis::AuthorizationError] Authorization is required
|
2209
|
-
def import_variants(variant_set_id, import_variants_request_object = nil, fields: nil, quota_user: nil, user_ip: nil, options: nil, &block)
|
2210
|
-
path = 'variantsets/{variantSetId}/importVariants'
|
2211
|
-
command = make_simple_command(:post, path, options)
|
2212
|
-
command.request_representation = Google::Apis::GenomicsV1beta2::ImportVariantsRequest::Representation
|
2213
|
-
command.request_object = import_variants_request_object
|
2214
|
-
command.response_representation = Google::Apis::GenomicsV1beta2::ImportVariantsResponse::Representation
|
2215
|
-
command.response_class = Google::Apis::GenomicsV1beta2::ImportVariantsResponse
|
2216
|
-
command.params['variantSetId'] = variant_set_id unless variant_set_id.nil?
|
2217
|
-
command.query['fields'] = fields unless fields.nil?
|
2218
|
-
command.query['quotaUser'] = quota_user unless quota_user.nil?
|
2219
|
-
command.query['userIp'] = user_ip unless user_ip.nil?
|
2220
|
-
execute_or_queue_command(command, &block)
|
2221
|
-
end
|
2222
|
-
|
2223
|
-
# Merges the given variants with existing variants. Each variant will be merged
|
2224
|
-
# with an existing variant that matches its reference sequence, start, end,
|
2225
|
-
# reference bases, and alternative bases. If no such variant exists, a new one
|
2226
|
-
# will be created.
|
2227
|
-
# When variants are merged, the call information from the new variant is added
|
2228
|
-
# to the existing variant, and other fields (such as key/value pairs) are
|
2229
|
-
# discarded.
|
2230
|
-
# @param [String] variant_set_id
|
2231
|
-
# The destination variant set.
|
2232
|
-
# @param [Google::Apis::GenomicsV1beta2::MergeVariantsRequest] merge_variants_request_object
|
2233
|
-
# @param [String] fields
|
2234
|
-
# Selector specifying which fields to include in a partial response.
|
2235
|
-
# @param [String] quota_user
|
2236
|
-
# Available to use for quota purposes for server-side applications. Can be any
|
2237
|
-
# arbitrary string assigned to a user, but should not exceed 40 characters.
|
2238
|
-
# Overrides userIp if both are provided.
|
2239
|
-
# @param [String] user_ip
|
2240
|
-
# IP address of the site where the request originates. Use this if you want to
|
2241
|
-
# enforce per-user limits.
|
2242
|
-
# @param [Google::Apis::RequestOptions] options
|
2243
|
-
# Request-specific options
|
2244
|
-
#
|
2245
|
-
# @yield [result, err] Result & error if block supplied
|
2246
|
-
# @yieldparam result [NilClass] No result returned for this method
|
2247
|
-
# @yieldparam err [StandardError] error object if request failed
|
2248
|
-
#
|
2249
|
-
# @return [void]
|
2250
|
-
#
|
2251
|
-
# @raise [Google::Apis::ServerError] An error occurred on the server and the request can be retried
|
2252
|
-
# @raise [Google::Apis::ClientError] The request is invalid and should not be retried without modification
|
2253
|
-
# @raise [Google::Apis::AuthorizationError] Authorization is required
|
2254
|
-
def merge_variants(variant_set_id, merge_variants_request_object = nil, fields: nil, quota_user: nil, user_ip: nil, options: nil, &block)
|
2255
|
-
path = 'variantsets/{variantSetId}/mergeVariants'
|
2256
|
-
command = make_simple_command(:post, path, options)
|
2257
|
-
command.request_representation = Google::Apis::GenomicsV1beta2::MergeVariantsRequest::Representation
|
2258
|
-
command.request_object = merge_variants_request_object
|
2259
|
-
command.params['variantSetId'] = variant_set_id unless variant_set_id.nil?
|
2260
|
-
command.query['fields'] = fields unless fields.nil?
|
2261
|
-
command.query['quotaUser'] = quota_user unless quota_user.nil?
|
2262
|
-
command.query['userIp'] = user_ip unless user_ip.nil?
|
2263
|
-
execute_or_queue_command(command, &block)
|
2264
|
-
end
|
2265
|
-
|
2266
|
-
# Updates a variant set's metadata. All other modifications are silently ignored.
|
2267
|
-
# This method supports patch semantics.
|
2268
|
-
# @param [String] variant_set_id
|
2269
|
-
# The ID of the variant to be updated (must already exist).
|
2270
|
-
# @param [Google::Apis::GenomicsV1beta2::VariantSet] variant_set_object
|
2271
|
-
# @param [String] fields
|
2272
|
-
# Selector specifying which fields to include in a partial response.
|
2273
|
-
# @param [String] quota_user
|
2274
|
-
# Available to use for quota purposes for server-side applications. Can be any
|
2275
|
-
# arbitrary string assigned to a user, but should not exceed 40 characters.
|
2276
|
-
# Overrides userIp if both are provided.
|
2277
|
-
# @param [String] user_ip
|
2278
|
-
# IP address of the site where the request originates. Use this if you want to
|
2279
|
-
# enforce per-user limits.
|
2280
|
-
# @param [Google::Apis::RequestOptions] options
|
2281
|
-
# Request-specific options
|
2282
|
-
#
|
2283
|
-
# @yield [result, err] Result & error if block supplied
|
2284
|
-
# @yieldparam result [Google::Apis::GenomicsV1beta2::VariantSet] parsed result object
|
2285
|
-
# @yieldparam err [StandardError] error object if request failed
|
2286
|
-
#
|
2287
|
-
# @return [Google::Apis::GenomicsV1beta2::VariantSet]
|
2288
|
-
#
|
2289
|
-
# @raise [Google::Apis::ServerError] An error occurred on the server and the request can be retried
|
2290
|
-
# @raise [Google::Apis::ClientError] The request is invalid and should not be retried without modification
|
2291
|
-
# @raise [Google::Apis::AuthorizationError] Authorization is required
|
2292
|
-
def patch_variantset(variant_set_id, variant_set_object = nil, fields: nil, quota_user: nil, user_ip: nil, options: nil, &block)
|
2293
|
-
path = 'variantsets/{variantSetId}'
|
2294
|
-
command = make_simple_command(:patch, path, options)
|
2295
|
-
command.request_representation = Google::Apis::GenomicsV1beta2::VariantSet::Representation
|
2296
|
-
command.request_object = variant_set_object
|
2297
|
-
command.response_representation = Google::Apis::GenomicsV1beta2::VariantSet::Representation
|
2298
|
-
command.response_class = Google::Apis::GenomicsV1beta2::VariantSet
|
2299
|
-
command.params['variantSetId'] = variant_set_id unless variant_set_id.nil?
|
2300
|
-
command.query['fields'] = fields unless fields.nil?
|
2301
|
-
command.query['quotaUser'] = quota_user unless quota_user.nil?
|
2302
|
-
command.query['userIp'] = user_ip unless user_ip.nil?
|
2303
|
-
execute_or_queue_command(command, &block)
|
2304
|
-
end
|
2305
|
-
|
2306
|
-
# Returns a list of all variant sets matching search criteria.
|
2307
|
-
# Implements GlobalAllianceApi.searchVariantSets.
|
2308
|
-
# @param [Google::Apis::GenomicsV1beta2::SearchVariantSetsRequest] search_variant_sets_request_object
|
2309
|
-
# @param [String] fields
|
2310
|
-
# Selector specifying which fields to include in a partial response.
|
2311
|
-
# @param [String] quota_user
|
2312
|
-
# Available to use for quota purposes for server-side applications. Can be any
|
2313
|
-
# arbitrary string assigned to a user, but should not exceed 40 characters.
|
2314
|
-
# Overrides userIp if both are provided.
|
2315
|
-
# @param [String] user_ip
|
2316
|
-
# IP address of the site where the request originates. Use this if you want to
|
2317
|
-
# enforce per-user limits.
|
2318
|
-
# @param [Google::Apis::RequestOptions] options
|
2319
|
-
# Request-specific options
|
2320
|
-
#
|
2321
|
-
# @yield [result, err] Result & error if block supplied
|
2322
|
-
# @yieldparam result [Google::Apis::GenomicsV1beta2::SearchVariantSetsResponse] parsed result object
|
2323
|
-
# @yieldparam err [StandardError] error object if request failed
|
2324
|
-
#
|
2325
|
-
# @return [Google::Apis::GenomicsV1beta2::SearchVariantSetsResponse]
|
2326
|
-
#
|
2327
|
-
# @raise [Google::Apis::ServerError] An error occurred on the server and the request can be retried
|
2328
|
-
# @raise [Google::Apis::ClientError] The request is invalid and should not be retried without modification
|
2329
|
-
# @raise [Google::Apis::AuthorizationError] Authorization is required
|
2330
|
-
def search_variant_sets(search_variant_sets_request_object = nil, fields: nil, quota_user: nil, user_ip: nil, options: nil, &block)
|
2331
|
-
path = 'variantsets/search'
|
2332
|
-
command = make_simple_command(:post, path, options)
|
2333
|
-
command.request_representation = Google::Apis::GenomicsV1beta2::SearchVariantSetsRequest::Representation
|
2334
|
-
command.request_object = search_variant_sets_request_object
|
2335
|
-
command.response_representation = Google::Apis::GenomicsV1beta2::SearchVariantSetsResponse::Representation
|
2336
|
-
command.response_class = Google::Apis::GenomicsV1beta2::SearchVariantSetsResponse
|
2337
|
-
command.query['fields'] = fields unless fields.nil?
|
2338
|
-
command.query['quotaUser'] = quota_user unless quota_user.nil?
|
2339
|
-
command.query['userIp'] = user_ip unless user_ip.nil?
|
2340
|
-
execute_or_queue_command(command, &block)
|
2341
|
-
end
|
2342
|
-
|
2343
|
-
# Updates a variant set's metadata. All other modifications are silently ignored.
|
2344
|
-
# @param [String] variant_set_id
|
2345
|
-
# The ID of the variant to be updated (must already exist).
|
2346
|
-
# @param [Google::Apis::GenomicsV1beta2::VariantSet] variant_set_object
|
2347
|
-
# @param [String] fields
|
2348
|
-
# Selector specifying which fields to include in a partial response.
|
2349
|
-
# @param [String] quota_user
|
2350
|
-
# Available to use for quota purposes for server-side applications. Can be any
|
2351
|
-
# arbitrary string assigned to a user, but should not exceed 40 characters.
|
2352
|
-
# Overrides userIp if both are provided.
|
2353
|
-
# @param [String] user_ip
|
2354
|
-
# IP address of the site where the request originates. Use this if you want to
|
2355
|
-
# enforce per-user limits.
|
2356
|
-
# @param [Google::Apis::RequestOptions] options
|
2357
|
-
# Request-specific options
|
2358
|
-
#
|
2359
|
-
# @yield [result, err] Result & error if block supplied
|
2360
|
-
# @yieldparam result [Google::Apis::GenomicsV1beta2::VariantSet] parsed result object
|
2361
|
-
# @yieldparam err [StandardError] error object if request failed
|
2362
|
-
#
|
2363
|
-
# @return [Google::Apis::GenomicsV1beta2::VariantSet]
|
2364
|
-
#
|
2365
|
-
# @raise [Google::Apis::ServerError] An error occurred on the server and the request can be retried
|
2366
|
-
# @raise [Google::Apis::ClientError] The request is invalid and should not be retried without modification
|
2367
|
-
# @raise [Google::Apis::AuthorizationError] Authorization is required
|
2368
|
-
def update_variantset(variant_set_id, variant_set_object = nil, fields: nil, quota_user: nil, user_ip: nil, options: nil, &block)
|
2369
|
-
path = 'variantsets/{variantSetId}'
|
2370
|
-
command = make_simple_command(:put, path, options)
|
2371
|
-
command.request_representation = Google::Apis::GenomicsV1beta2::VariantSet::Representation
|
2372
|
-
command.request_object = variant_set_object
|
2373
|
-
command.response_representation = Google::Apis::GenomicsV1beta2::VariantSet::Representation
|
2374
|
-
command.response_class = Google::Apis::GenomicsV1beta2::VariantSet
|
2375
|
-
command.params['variantSetId'] = variant_set_id unless variant_set_id.nil?
|
2376
|
-
command.query['fields'] = fields unless fields.nil?
|
2377
|
-
command.query['quotaUser'] = quota_user unless quota_user.nil?
|
2378
|
-
command.query['userIp'] = user_ip unless user_ip.nil?
|
2379
|
-
execute_or_queue_command(command, &block)
|
2380
|
-
end
|
2381
|
-
|
2382
|
-
protected
|
2383
|
-
|
2384
|
-
def apply_command_defaults(command)
|
2385
|
-
command.query['key'] = key unless key.nil?
|
2386
|
-
command.query['quotaUser'] = quota_user unless quota_user.nil?
|
2387
|
-
command.query['userIp'] = user_ip unless user_ip.nil?
|
2388
|
-
end
|
2389
|
-
end
|
2390
|
-
end
|
2391
|
-
end
|
2392
|
-
end
|