gn_crossmap 4.0.2 → 4.0.3

checksums.yaml

@@ -1,7 +1,7 @@
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-  data.tar.gz: fae27bcaa9907f0eda181167d2a6f5d96f07b1f2
+  metadata.gz: 61f6c713d23eeb04135fdb9558fe16e5429ead95
+  data.tar.gz: dfe09aab9c97dc294e31050b43cce3142f590add
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data/CHANGELOG.md

@@ -1,5 +1,9 @@
 # ``gn_crossmap`` CHANGELOG
 
+## 4.0.3
+
+* @dimus - Update gems, remove deprecated gems
+
 ## 4.0.2
 
 * @dimus - Add resolution span_time to stats

data/exe/crossmap

@@ -1,7 +1,7 @@
 #!/usr/bin/env ruby
 # frozen_string_literal: true
 
-require "trollop"
+require "optimist"
 require "gn_crossmap"
 
 puts "This program requires Ruby >= v. 2.4.1" if RUBY_VERSION < "2.4.1"
@@ -9,7 +9,7 @@ puts "This program requires Ruby >= v. 2.4.1" if RUBY_VERSION < "2.4.1"
 CATALOGUE_OF_LIFE = 1
 OUTPUT = "output.csv"
 THREADS = 1
-opts = Trollop.options do
+opts = Optimist.options do
   banner "Compares a list of scientific names to scientific names from a " \
     "data source from Global Names Resolver\n\n " \
     "Usage:\n  crossmap [options]\n\noptions:" \
@@ -26,9 +26,9 @@ opts = Trollop.options do
                             "matched names", type: :boolean)
 end
 
-Trollop.die :input, "must be set" if opts[:input].nil?
+Optimist.die :input, "must be set" if opts[:input].nil?
 unless File.exist?(opts[:input]) || opts[:input] == "-"
-  Trollop.die :input, "file must exist"
+  Optimist.die :input, "file must exist"
 end
 
 begin

data/gn_crossmap.gemspec

@@ -30,19 +30,19 @@ Gem::Specification.new do |gem|
   gem.executables   = gem.files.grep(%r{^exe/}) { |f| File.basename(f) }
   gem.require_paths = ["lib"]
 
-  gem.add_dependency "biodiversity", "~> 3.1"
+  gem.add_dependency "biodiversity", "~> 3.5"
   gem.add_dependency "concurrent-ruby", "~> 1.0"
   gem.add_dependency "gn_uuid", "~> 0.5"
   gem.add_dependency "logger-colors", "~> 1.0"
   gem.add_dependency "rest-client", "~> 2.0"
-  gem.add_dependency "trollop", "~> 2.1"
+  gem.add_dependency "optimist", "~> 3.0"
 
-  gem.add_development_dependency "bundler", "~> 1.7"
-  gem.add_development_dependency "byebug", "~> 9.1"
+  gem.add_development_dependency "bundler", "~> 1.16"
+  gem.add_development_dependency "byebug", "~> 10.0"
   gem.add_development_dependency "coveralls", "~> 0.8"
-  gem.add_development_dependency "rake", "~> 12.0"
-  gem.add_development_dependency "rspec", "~> 3.2"
-  gem.add_development_dependency "rubocop", "~> 0.50"
+  gem.add_development_dependency "rake", "~> 12.3"
+  gem.add_development_dependency "rspec", "~> 3.8"
+  gem.add_development_dependency "rubocop", "~> 0.59"
 end
 
 # rubocop:enable Metrics/BlockLength:

data/lib/gn_crossmap/version.rb

@@ -2,7 +2,7 @@
 
 # Namespace module for crossmapping checklists to GN sources
 module GnCrossmap
-  VERSION = "4.0.2"
+  VERSION = "4.0.3"
 
   def self.version
     VERSION

metadata

@@ -1,14 +1,14 @@
 --- !ruby/object:Gem::Specification
 name: gn_crossmap
 version: !ruby/object:Gem::Version
-  version: 4.0.2
+  version: 4.0.3
 platform: ruby
 authors:
 - Dmitry Mozzherin
 autorequire: 
 bindir: exe
 cert_chain: []
-date: 2017-09-18 00:00:00.000000000 Z
+date: 2018-10-22 00:00:00.000000000 Z
 dependencies:
 - !ruby/object:Gem::Dependency
   name: biodiversity
@@ -16,14 +16,14 @@ dependencies:
     requirements:
     - - "~>"
       - !ruby/object:Gem::Version
-        version: '3.1'
+        version: '3.5'
   type: :runtime
   prerelease: false
   version_requirements: !ruby/object:Gem::Requirement
     requirements:
     - - "~>"
       - !ruby/object:Gem::Version
-        version: '3.1'
+        version: '3.5'
 - !ruby/object:Gem::Dependency
   name: concurrent-ruby
   requirement: !ruby/object:Gem::Requirement
@@ -81,47 +81,47 @@ dependencies:
       - !ruby/object:Gem::Version
         version: '2.0'
 - !ruby/object:Gem::Dependency
-  name: trollop
+  name: optimist
   requirement: !ruby/object:Gem::Requirement
     requirements:
     - - "~>"
       - !ruby/object:Gem::Version
-        version: '2.1'
+        version: '3.0'
   type: :runtime
   prerelease: false
   version_requirements: !ruby/object:Gem::Requirement
     requirements:
     - - "~>"
       - !ruby/object:Gem::Version
-        version: '2.1'
+        version: '3.0'
 - !ruby/object:Gem::Dependency
   name: bundler
   requirement: !ruby/object:Gem::Requirement
     requirements:
     - - "~>"
       - !ruby/object:Gem::Version
-        version: '1.7'
+        version: '1.16'
   type: :development
   prerelease: false
   version_requirements: !ruby/object:Gem::Requirement
     requirements:
     - - "~>"
       - !ruby/object:Gem::Version
-        version: '1.7'
+        version: '1.16'
 - !ruby/object:Gem::Dependency
   name: byebug
   requirement: !ruby/object:Gem::Requirement
     requirements:
     - - "~>"
       - !ruby/object:Gem::Version
-        version: '9.1'
+        version: '10.0'
   type: :development
   prerelease: false
   version_requirements: !ruby/object:Gem::Requirement
     requirements:
     - - "~>"
       - !ruby/object:Gem::Version
-        version: '9.1'
+        version: '10.0'
 - !ruby/object:Gem::Dependency
   name: coveralls
   requirement: !ruby/object:Gem::Requirement
@@ -142,42 +142,42 @@ dependencies:
     requirements:
     - - "~>"
       - !ruby/object:Gem::Version
-        version: '12.0'
+        version: '12.3'
   type: :development
   prerelease: false
   version_requirements: !ruby/object:Gem::Requirement
     requirements:
     - - "~>"
       - !ruby/object:Gem::Version
-        version: '12.0'
+        version: '12.3'
 - !ruby/object:Gem::Dependency
   name: rspec
   requirement: !ruby/object:Gem::Requirement
     requirements:
     - - "~>"
       - !ruby/object:Gem::Version
-        version: '3.2'
+        version: '3.8'
   type: :development
   prerelease: false
   version_requirements: !ruby/object:Gem::Requirement
     requirements:
     - - "~>"
       - !ruby/object:Gem::Version
-        version: '3.2'
+        version: '3.8'
 - !ruby/object:Gem::Dependency
   name: rubocop
   requirement: !ruby/object:Gem::Requirement
     requirements:
     - - "~>"
       - !ruby/object:Gem::Version
-        version: '0.50'
+        version: '0.59'
   type: :development
   prerelease: false
   version_requirements: !ruby/object:Gem::Requirement
     requirements:
     - - "~>"
       - !ruby/object:Gem::Version
-        version: '0.50'
+        version: '0.59'
 description: Gem uses a checklist in a comma-separated format as an input, and returns
   back a new comma-separated list crossmapping the scientific names to one of the
   data sources from http://resolver.globalnames.org