glydevkit 0.2.6-java → 0.2.8-java
This diff represents the content of publicly available package versions that have been released to one of the supported registries. The information contained in this diff is provided for informational purposes only and reflects changes between package versions as they appear in their respective public registries.
- checksums.yaml +4 -4
- data/jar.yml +2 -2
- data/lib/glydevkit/gly_tou_can.rb +3 -1
- data/lib/glydevkit/glytoucan_data_handler.rb +1 -5
- metadata +3 -3
checksums.yaml
CHANGED
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@@ -1,7 +1,7 @@
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1
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---
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SHA256:
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-
metadata.gz:
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-
data.tar.gz:
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3
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+
metadata.gz: c2cfe602e38bea8da384c31f3b05f4c44d6f49c89546d1744ebc182ed3afa485
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4
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data.tar.gz: 6907536c3d76c209323b21f2f79ea7428cde677af518c9de97275334a9ef3685
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SHA512:
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-
metadata.gz:
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7
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-
data.tar.gz:
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metadata.gz: 923084fd7a30fcee176661fc3bf142e3d5496bdcfcc71250c14bdfe03bded8be8ac3aa587aded445f198fe0efd277c893d57684fc3bae5223c88735ae2e8d5ce
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7
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data.tar.gz: 390041063992036e39969d527a162ce0262d7fd72a19da3ca577a7117623dd8c2246689addbb335bef63fa62763eb946f743a2f55f921708b8a23159c142917a
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data/jar.yml
CHANGED
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@@ -68,8 +68,8 @@ libraries:
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- name: archetype
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info: "https://gitlab.glyco.info/glycosmos/glytoucangroup/archetype/lib"
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-
version: 0.1.
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url: "https://gitlab.glyco.info/glycosmos/glytoucangroup/archetype/lib/-/package_files/
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version: 0.1.8
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url: "https://gitlab.glyco.info/glycosmos/glytoucangroup/archetype/lib/-/package_files/850/download"
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file: "jar/archetype.jar"
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- name: glycanformatconverter
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@@ -4,6 +4,7 @@ require_relative '../jar/archetype.jar'
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require_relative '../jar/wurcsframework.jar'
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java_import 'org.glytoucan.Archetype'
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java_import 'org.glytoucan.util.Result'
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java_import 'org.glycoinfo.WURCSFramework.wurcs.graph.WURCSGraph'
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java_import 'org.glycoinfo.WURCSFramework.util.WURCSException'
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@@ -19,7 +20,8 @@ module GlyDevKit
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# glytoucan = GlyDevKit::GlyTouCan.new
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# archetype = glytoucan.archetype("WURCS=2.0/...")
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def archetype(w)
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-
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result = Archetype.beBorn(w)
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Hash[result.get_map_result]
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end
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end
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end
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@@ -32,11 +32,6 @@ module GlyDevKit
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@all_data["encode-wurcs-key"][encode(w)]
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end
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-
private
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-
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require 'zlib'
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java_import 'java.util.Base64'
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-
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def encode(input_string)
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compressed_data = Zlib::Deflate.deflate(input_string)
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encoder = Base64.getUrlEncoder()
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@@ -49,6 +44,7 @@ module GlyDevKit
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Zlib::Inflate.inflate(String.from_java_bytes(compressed_data))
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end
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+
private
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def sparql_query
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<<-EOS
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metadata
CHANGED
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@@ -1,14 +1,14 @@
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--- !ruby/object:Gem::Specification
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name: glydevkit
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version: !ruby/object:Gem::Version
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-
version: 0.2.
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version: 0.2.8
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platform: java
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authors:
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- Akihiro Fujita
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autorequire:
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bindir: bin
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cert_chain: []
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date: 2024-
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date: 2024-12-05 00:00:00.000000000 Z
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dependencies:
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- !ruby/object:Gem::Dependency
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name: java
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@@ -109,7 +109,7 @@ required_rubygems_version: !ruby/object:Gem::Requirement
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- !ruby/object:Gem::Version
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version: '0'
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requirements: []
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rubygems_version: 3.5.
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rubygems_version: 3.5.23
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signing_key:
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specification_version: 4
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summary: The Glycoscience Development Kit (GlyDevKit) is a JRuby library for glyco-informatics
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