glossarist 2.5.1 → 2.6.0

checksums.yaml

@@ -1,7 +1,7 @@
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+  data.tar.gz: 56d29d76e0fc77885edcbc1c59cd533ec99029b4db957ad5772d78bf96356c1c
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data/.gitignore

@@ -22,3 +22,5 @@ localcache
 .vscode
 
 TODO*
+
+*.gem

data/.rubocop_todo.yml

@@ -1,23 +1,66 @@
 # This configuration was generated by
 # `rubocop --auto-gen-config`
-# on 2026-05-04 09:39:17 UTC using RuboCop version 1.86.1.
+# on 2026-05-06 17:07:44 UTC using RuboCop version 1.86.1.
 # The point is for the user to remove these configuration records
 # one by one as the offenses are removed from the code base.
 # Note that changes in the inspected code, or installation of new
 # versions of RuboCop, may require this file to be generated again.
 
+# Offense count: 6
+# This cop supports safe autocorrection (--autocorrect).
+# Configuration parameters: TreatCommentsAsGroupSeparators, ConsiderPunctuation.
+Bundler/OrderedGems:
+  Exclude:
+    - 'Gemfile'
+
 # Offense count: 1
 Gemspec/RequiredRubyVersion:
   Exclude:
     - 'glossarist.gemspec'
 
-# Offense count: 196
+# Offense count: 10
+# This cop supports safe autocorrection (--autocorrect).
+# Configuration parameters: EnforcedStyle, IndentationWidth.
+# SupportedStyles: with_first_argument, with_fixed_indentation
+Layout/ArgumentAlignment:
+  Exclude:
+    - 'lib/glossarist/cli/export_command.rb'
+    - 'lib/glossarist/gcr_package.rb'
+    - 'spec/unit/gcr_package_spec.rb'
+
+# Offense count: 1
+# This cop supports safe autocorrection (--autocorrect).
+Layout/EmptyLinesAroundMethodBody:
+  Exclude:
+    - 'lib/glossarist/transforms/concept_to_tbx_transform.rb'
+
+# Offense count: 1
+# This cop supports safe autocorrection (--autocorrect).
+# Configuration parameters: AllowMultipleStyles, EnforcedHashRocketStyle, EnforcedColonStyle, EnforcedLastArgumentHashStyle.
+# SupportedHashRocketStyles: key, separator, table
+# SupportedColonStyles: key, separator, table
+# SupportedLastArgumentHashStyles: always_inspect, always_ignore, ignore_implicit, ignore_explicit
+Layout/HashAlignment:
+  Exclude:
+    - 'lib/glossarist/gcr_package.rb'
+
+# Offense count: 214
 # This cop supports safe autocorrection (--autocorrect).
 # Configuration parameters: Max, AllowHeredoc, AllowURI, AllowQualifiedName, URISchemes, AllowRBSInlineAnnotation, AllowCopDirectives, AllowedPatterns, SplitStrings.
 # URISchemes: http, https
 Layout/LineLength:
   Enabled: false
 
+# Offense count: 12
+# This cop supports safe autocorrection (--autocorrect).
+# Configuration parameters: AllowInHeredoc.
+Layout/TrailingWhitespace:
+  Exclude:
+    - 'lib/glossarist/cli/export_command.rb'
+    - 'lib/glossarist/gcr_package.rb'
+    - 'lib/glossarist/transforms/concept_to_tbx_transform.rb'
+    - 'spec/unit/gcr_package_spec.rb'
+
 # Offense count: 1
 # Configuration parameters: AllowedMethods.
 # AllowedMethods: enums
@@ -30,18 +73,20 @@ Lint/DuplicateMethods:
   Exclude:
     - 'lib/glossarist/managed_concept.rb'
 
-# Offense count: 1
+# Offense count: 2
 # This cop supports safe autocorrection (--autocorrect).
 # Configuration parameters: AllowUnusedKeywordArguments, IgnoreEmptyMethods, IgnoreNotImplementedMethods, NotImplementedExceptions.
 # NotImplementedExceptions: NotImplementedError
 Lint/UnusedMethodArgument:
   Exclude:
+    - 'lib/glossarist/cli/export_command.rb'
     - 'lib/glossarist/dataset_validator.rb'
 
-# Offense count: 18
+# Offense count: 23
 # Configuration parameters: AllowedMethods, AllowedPatterns, CountRepeatedAttributes, Max.
 Metrics/AbcSize:
   Exclude:
+    - 'lib/glossarist/cli/export_command.rb'
     - 'lib/glossarist/cli/package_command.rb'
     - 'lib/glossarist/cli/validate_command.rb'
     - 'lib/glossarist/concept_manager.rb'
@@ -51,6 +96,8 @@ Metrics/AbcSize:
     - 'lib/glossarist/reference_resolver.rb'
     - 'lib/glossarist/resolution_adapter/local.rb'
     - 'lib/glossarist/schema_migration.rb'
+    - 'lib/glossarist/transforms/concept_to_skos_transform.rb'
+    - 'lib/glossarist/transforms/concept_to_tbx_transform.rb'
     - 'lib/glossarist/utilities/uuid.rb'
     - 'spec/unit/concept_collector_spec.rb'
 
@@ -60,25 +107,34 @@ Metrics/AbcSize:
 Metrics/BlockLength:
   Max: 28
 
-# Offense count: 15
+# Offense count: 19
 # Configuration parameters: AllowedMethods, AllowedPatterns, Max.
 Metrics/CyclomaticComplexity:
   Exclude:
+    - 'lib/glossarist/cli/export_command.rb'
     - 'lib/glossarist/concept_validator.rb'
     - 'lib/glossarist/designation/expression.rb'
     - 'lib/glossarist/gcr_metadata.rb'
+    - 'lib/glossarist/gcr_statistics.rb'
     - 'lib/glossarist/managed_concept.rb'
     - 'lib/glossarist/reference_extractor.rb'
     - 'lib/glossarist/reference_resolver.rb'
     - 'lib/glossarist/resolution_adapter/local.rb'
     - 'lib/glossarist/schema_migration.rb'
+    - 'lib/glossarist/transforms/concept_to_skos_transform.rb'
+    - 'lib/glossarist/transforms/concept_to_tbx_transform.rb'
 
-# Offense count: 31
+# Offense count: 35
 # Configuration parameters: CountComments, CountAsOne, AllowedMethods, AllowedPatterns.
 Metrics/MethodLength:
   Max: 42
 
-# Offense count: 12
+# Offense count: 4
+# Configuration parameters: CountKeywordArgs, MaxOptionalParameters.
+Metrics/ParameterLists:
+  Max: 6
+
+# Offense count: 13
 # Configuration parameters: AllowedMethods, AllowedPatterns, Max.
 Metrics/PerceivedComplexity:
   Exclude:
@@ -89,6 +145,8 @@ Metrics/PerceivedComplexity:
     - 'lib/glossarist/reference_resolver.rb'
     - 'lib/glossarist/resolution_adapter/local.rb'
     - 'lib/glossarist/schema_migration.rb'
+    - 'lib/glossarist/transforms/concept_to_skos_transform.rb'
+    - 'lib/glossarist/transforms/concept_to_tbx_transform.rb'
 
 # Offense count: 6
 # Configuration parameters: MinNameLength, AllowNamesEndingInNumbers, AllowedNames, ForbiddenNames.
@@ -97,6 +155,14 @@ Naming/MethodParameterName:
   Exclude:
     - 'lib/glossarist/schema_migration.rb'
 
+# Offense count: 3
+# Configuration parameters: EnforcedStyle, CheckMethodNames, CheckSymbols, AllowedIdentifiers, AllowedPatterns.
+# SupportedStyles: snake_case, normalcase, non_integer
+# AllowedIdentifiers: TLS1_1, TLS1_2, capture3, iso8601, rfc1123_date, rfc822, rfc2822, rfc3339, x86_64
+Naming/VariableNumber:
+  Exclude:
+    - 'spec/unit/rdf/skos_vocabulary_spec.rb'
+
 # Offense count: 6
 # This cop supports safe autocorrection (--autocorrect).
 # Configuration parameters: MaxUnannotatedPlaceholdersAllowed, Mode, AllowedMethods, AllowedPatterns.
@@ -104,6 +170,12 @@ Naming/MethodParameterName:
 Style/FormatStringToken:
   EnforcedStyle: unannotated
 
+# Offense count: 2
+# This cop supports safe autocorrection (--autocorrect).
+Style/MultilineIfModifier:
+  Exclude:
+    - 'lib/glossarist/gcr_package.rb'
+
 # Offense count: 1
 # Configuration parameters: AllowedClasses.
 Style/OneClassPerFile:
@@ -113,7 +185,15 @@ Style/OneClassPerFile:
     - 'lib/glossarist.rb'
 
 # Offense count: 1
+# This cop supports safe autocorrection (--autocorrect).
+Style/RedundantAssignment:
+  Exclude:
+    - 'lib/glossarist/transforms/concept_to_tbx_transform.rb'
+
+# Offense count: 4
 # Configuration parameters: Max.
 Style/SafeNavigationChainLength:
   Exclude:
     - 'lib/glossarist/managed_concept.rb'
+    - 'lib/glossarist/transforms/concept_to_skos_transform.rb'
+    - 'lib/glossarist/transforms/concept_to_tbx_transform.rb'

data/CLAUDE.md

@@ -67,11 +67,24 @@ Three classes handle glossary concept registry (GCR) ZIP packages:
 
 ### CLI
 
-The `exe/glossarist` executable uses Thor. Currently provides `generate_latex` which converts concepts to LaTeX glossary entries via `ConceptSet`.
+The `exe/glossarist` executable uses Thor. Commands:
+- `generate_latex` — converts concepts to LaTeX glossary entries
+- `package` — creates `.gcr` ZIP archives with optional compiled formats (`--compiled-formats tbx,jsonld,turtle,jsonl`)
+- `export` — exports concepts in json/tbx/jsonld/turtle/jsonl formats
+- `validate` — validates datasets and `.gcr` files
+- `upgrade` — migrates datasets to current schema version
+
+### Export Transforms
+
+- **`ConceptToTbxTransform`** (`transforms/concept_to_tbx_transform.rb`) — converts ManagedConcept to TBX-XML using the tbx gem (ISO 30042:2019). Produces `Tbx::ConceptEntry` per concept or `Tbx::Document` for full export.
+- **`ConceptToSkosTransform`** (`transforms/concept_to_skos_transform.rb`) — converts ManagedConcept to SKOS RDF using `Glossarist::Rdf::SkosConcept`. Has `transform` (single) and `transform_document` (batch, returns `SkosVocabulary`). Produces JSON-LD and Turtle via the unified `rdf` DSL.
+- **SKOS/RDF models** (`lib/glossarist/rdf/`) — `SkosConcept`, `SkosVocabulary` (ConceptScheme container), `LocalizedLiteral` (language-tagged value), namespace classes.
+- TBX, Turtle, JSON-LD, JSONL export all write a single document file; JSON writes per-concept files.
 
 ### Dependencies
 
-- `lutaml-model` (~> 0.8) — serialization framework (YAML/XML)
+- `lutaml-model` (~> 0.8.5) — serialization framework (YAML/XML/JSON-LD/Turtle)
+- `tbx` — ISO 30042:2019 TBX model classes
 - `relaton` (>= 2.0.0, < 3) — bibliography database integration
 - `thor` — CLI commands
 

data/Gemfile

@@ -7,6 +7,7 @@ gemspec
 gem "canon"
 gem "lutaml-model", "~> 0.8.0"
 gem "rake", "~> 13.0"
+gem "tbx", "~> 0.1"
 gem "rspec", "~> 3.0"
 gem "rubocop"
 gem "rubocop-performance"
@@ -15,20 +16,19 @@ gem "rubocop-rspec"
 
 # Override relaton gems with lutaml-model 0.8 compatible versions.
 # Released 2.0.0 gems have untyped lutaml-model attributes that fail with 0.8+.
-# fix/lutaml-model-0.8 branches keep version 2.0.0 (compatible) + lutaml-model ~> 0.8.
-# lutaml-integration branches also have typed attributes and work with relaton-bib ~> 2.0.0.
+# lutaml-integration branches have typed attributes and relaton-bib ~> 2.1.0.
 # TODO: Remove once relaton gems release versions with lutaml-model 0.8 support.
 gem "relaton-3gpp", github: "relaton/relaton-3gpp",
-                    branch: "fix/lutaml-model-0.8"
-gem "relaton-bib", github: "relaton/relaton-bib", branch: "fix/lutaml-model-0.8"
+                    branch: "lutaml-integration"
+gem "relaton-bib", github: "relaton/relaton-bib", branch: "lutaml-integration"
 gem "relaton-bipm", github: "relaton/relaton-bipm",
-                    branch: "fix/lutaml-model-0.8"
-gem "relaton-bsi", github: "relaton/relaton-bsi", branch: "fix/lutaml-model-0.8"
+                    branch: "lutaml-integration"
+gem "relaton-bsi", github: "relaton/relaton-bsi", branch: "lutaml-integration"
 gem "relaton-calconnect", github: "relaton/relaton-calconnect",
                           branch: "lutaml-integration"
 gem "relaton-ccsds", github: "relaton/relaton-ccsds",
                      branch: "lutaml-integration"
 gem "relaton-cen", github: "relaton/relaton-cen", branch: "lutaml-integration"
 gem "relaton-iec", github: "relaton/relaton-iec", branch: "lutaml-integration"
-gem "relaton-iso", github: "relaton/relaton-iso", branch: "fix/lutaml-model-0.8"
+gem "relaton-iso", github: "relaton/relaton-iso", branch: "lutaml-integration"
 gem "relaton-itu", github: "relaton/relaton-itu", branch: "lutaml-integration"

data/README.adoc

@@ -407,6 +407,12 @@ Options:
 
 |--tags
 |Tags for the dataset
+
+|--compiled-formats
+|Comma-separated compiled formats to bundle (tbx,jsonld,turtle,jsonl)
+
+|--concept-uri-template
+|URI template for concept URIs
 |===
 
 Ruby API:
@@ -418,9 +424,89 @@ GcrPackage.create_from_directory(
   shortname: "mydataset",
   version: "1.0.0",
   uri_prefix: "urn:iso:std:iso:19111",
+  compiled_formats: ["jsonld", "turtle"],
 )
 ----
 
+=== export
+
+Export concepts in machine-readable formats.
+
+[,bash]
+----
+glossarist export PATH --format json --output DIR
+glossarist export PATH --format jsonld --output DIR --shortname isotc211
+glossarist export PATH --format turtle --output DIR
+glossarist export PATH --format tbx --output DIR --shortname isotc211
+glossarist export PATH --format jsonl --output DIR
+glossarist export package.gcr --format json --output DIR
+----
+
+The path can be either a concept dataset directory or a `.gcr` file. When exporting from a `.gcr`, the `shortname` and `uri_prefix` are automatically resolved from the package metadata.
+
+==== Output Formats
+
+[cols="1,2,1"]
+|===
+|Format |Output |Files
+
+|`json`
+|Per-concept JSON files
+|`{concept_id}.json`
+
+|`tbx`
+|Single TBX-XML document (ISO 30042:2019)
+|`{shortname}.tbx.xml`
+
+|`jsonld`
+|Single JSON-LD file with `@graph`
+|`{shortname}.jsonld`
+
+|`turtle`
+|Single Turtle file with all concept triples
+|`{shortname}.ttl`
+
+|`jsonl`
+|JSONL file with one JSON-LD object per line
+|`{shortname}.jsonl`
+|===
+
+Options:
+[cols="1,1"]
+|===
+|--format (required)
+|Output format: `json`, `tbx`, `jsonld`, `turtle`, or `jsonl`
+
+|o, --output (required)
+|Output directory
+
+|--shortname
+|Dataset shortname for concept ID prefixing
+
+|--uri-prefix
+|URI/URN prefix for the dataset
+
+|--site-url
+|Base URL of the glossarist site
+
+|--title
+|Dataset title for document header
+|===
+
+Ruby API:
+[,ruby]
+----
+# Export to JSON-LD
+cmd = Glossarist::CLI::ExportCommand.new("path/to/dataset",
+  format: "jsonld", output: "/tmp/export", shortname: "isotc211")
+cmd.run
+
+# Transform a single concept to SKOS
+skos = Glossarist::Transforms::ConceptToSkosTransform.transform(concept)
+puts skos.to_jsonld
+puts skos.to_turtle
+----
+
 === validate
 
 Validate a dataset directory or `.gcr` file for schema compliance.

data/glossarist.gemspec

@@ -31,8 +31,9 @@ Gem::Specification.new do |spec|
   spec.executables   = spec.files.grep(%r{\Aexe/}) { |f| File.basename(f) }
   spec.require_paths = ["lib"]
 
-  spec.add_dependency "lutaml-model", "~> 0.8"
+  spec.add_dependency "lutaml-model", "~> 0.8.5"
   spec.add_dependency "relaton", ">= 2.0.0", "< 3"
   spec.add_dependency "rubyzip", ">= 2.3", "< 3"
+  spec.add_dependency "tbx", "~> 0.1"
   spec.add_dependency "thor"
 end

data/lib/glossarist/cli/export_command.rb

@@ -0,0 +1,109 @@
+# frozen_string_literal: true
+
+module Glossarist
+  class CLI
+    class ExportCommand
+      EXTENSIONS = {
+        "json" => "json",
+        "jsonld" => "jsonld",
+        "turtle" => "ttl",
+        "tbx" => "tbx.xml",
+        "jsonl" => "jsonl",
+      }.freeze
+
+      def initialize(path, options)
+        @path = path
+        @options = options
+      end
+
+      def run
+        format = @options[:format]
+        output_dir = File.expand_path(@options[:output])
+        FileUtils.mkdir_p(output_dir)
+
+        concepts = load_concepts
+        name = resolve_shortname(concepts)
+
+        case format
+        when "json" then export_json(concepts, output_dir)
+        when "jsonld" then export_document(concepts, name, output_dir, :jsonld)
+        when "turtle" then export_document(concepts, name, output_dir, :turtle)
+        when "tbx" then export_tbx(concepts, name, output_dir)
+        when "jsonl" then export_jsonl(concepts, name, output_dir)
+        end
+      rescue ArgumentError => e
+        warn "Error: #{e.message}"
+        exit 1
+      end
+
+      private
+
+      def load_concepts
+        if @path.end_with?(".gcr")
+          package = GcrPackage.load(@path)
+          resolve_metadata_from_package(package)
+          package.concepts
+        else
+          collection = ManagedConceptCollection.new
+          collection.load_from_files(@path)
+          collection.to_a
+        end
+      end
+
+      def resolve_metadata_from_package(package)
+        @options[:shortname] ||= package.metadata["shortname"]
+        @options[:uri_prefix] ||= package.metadata["uri_prefix"]
+      end
+
+      def resolve_shortname(_concepts)
+        @options[:shortname] || "glossary"
+      end
+
+      def transform_options
+        {
+          shortname: @options[:shortname],
+          uri_prefix: @options[:uri_prefix],
+          site_url: @options[:site_url],
+          title: @options[:title],
+        }.compact
+      end
+
+      def export_json(concepts, output_dir)
+        concepts.each do |concept|
+          id = concept.data&.id || concept.identifier
+          File.write(File.join(output_dir, "#{id}.json"), concept.to_json)
+        end
+      end
+
+      def export_document(concepts, name, output_dir, format)
+        require "glossarist/transforms/concept_to_skos_transform"
+        vocab = Transforms::ConceptToSkosTransform.transform_document(concepts,
+                                                                      transform_options)
+        ext = EXTENSIONS[format.to_s]
+        File.write(File.join(output_dir, "#{name}.#{ext}"),
+                   vocab.public_send(:"to_#{format}"))
+      end
+
+      def export_tbx(concepts, name, output_dir)
+        require "glossarist/transforms/concept_to_tbx_transform"
+        doc = Transforms::ConceptToTbxTransform.transform_document(concepts,
+                                                                   transform_options)
+        File.write(File.join(output_dir, "#{name}.#{EXTENSIONS['tbx']}"),
+                   doc.to_xml)
+      end
+
+      def export_jsonl(concepts, name, output_dir)
+        require "glossarist/transforms/concept_to_skos_transform"
+        File.open(File.join(output_dir, "#{name}.#{EXTENSIONS['jsonl']}"),
+                  "w") do |f|
+          concepts.each do |concept|
+            skos = Transforms::ConceptToSkosTransform.transform(concept,
+                                                                transform_options)
+            f.write(skos.to_jsonld)
+            f.write("\n")
+          end
+        end
+      end
+    end
+  end
+end

data/lib/glossarist/cli/package_command.rb

@@ -20,6 +20,8 @@ module Glossarist
           tags: @options[:tags],
           register_yaml: @options[:register_yaml],
           uri_prefix: @options[:uri_prefix],
+          concept_uri_template: @options[:concept_uri_template],
+          compiled_formats: parse_compiled_formats,
         )
 
         puts "Created #{@options[:output]}"
@@ -27,6 +29,15 @@ module Glossarist
         warn "Error: #{e.message}"
         exit 1
       end
+
+      private
+
+      def parse_compiled_formats
+        raw = @options[:compiled_formats]
+        return [] unless raw
+
+        raw.split(",").map(&:strip).reject(&:empty?)
+      end
     end
   end
 end

data/lib/glossarist/cli.rb

@@ -57,6 +57,10 @@ module Glossarist
     option :register_yaml, type: :string,
                            desc: "Path to register.yaml to include in package"
     option :tags, type: :array, desc: "Tags for the dataset"
+    option :compiled_formats, type: :string,
+                              desc: "Comma-separated compiled formats to bundle (tbx,jsonld,turtle,jsonl)"
+    option :concept_uri_template, type: :string,
+                                  desc: "URI template for concept URIs"
     def package(dir)
       require_relative "cli/package_command"
       Glossarist::CLI::PackageCommand.new(dir, options).run
@@ -76,6 +80,25 @@ module Glossarist
       Glossarist::CLI::ValidateCommand.new(path, options).run
     end
 
+    desc "export PATH", "Export concepts in machine-readable formats"
+    option :format, type: :string, required: true,
+                    enum: %w[json jsonld turtle tbx jsonl],
+                    desc: "Output format"
+    option :output, aliases: :o, type: :string, required: true,
+                    desc: "Output directory"
+    option :shortname, type: :string,
+                       desc: "Dataset shortname for concept ID prefixing"
+    option :uri_prefix, type: :string,
+                        desc: "URI/URN prefix for the dataset"
+    option :site_url, type: :string,
+                      desc: "Base URL of the glossarist site"
+    option :title, type: :string,
+                   desc: "Dataset title for document header"
+    def export(path)
+      require_relative "cli/export_command"
+      Glossarist::CLI::ExportCommand.new(path, options).run
+    end
+
     def method_missing(*args)
       warn "No method found named: #{args[0]}"
       warn "Run with `--help` or `-h` to see available options"

data/lib/glossarist/concept_validator.rb

@@ -52,7 +52,6 @@ module Glossarist
     def validate_concept(concept, fname, seen_ids)
       validate_id(concept, fname, seen_ids)
       validate_localizations(concept, fname)
-      validate_definitions(concept, fname)
       validate_entry_statuses(concept, fname)
     end
 
@@ -87,18 +86,6 @@ module Glossarist
       end
     end
 
-    def validate_definitions(concept, fname)
-      (concept.localizations&.values || []).each do |l10n|
-        lang = l10n.language_code || "unknown"
-        next unless l10n.data&.definition
-
-        defs = l10n.data.definition
-        if defs.empty?
-          @errors << "#{fname}/#{lang}: definition is empty"
-        end
-      end
-    end
-
     def validate_entry_statuses(concept, fname)
       (concept.localizations&.values || []).each do |l10n|
         lang = l10n.language_code || "unknown"

data/lib/glossarist/gcr_metadata.rb

@@ -19,6 +19,7 @@ module Glossarist
     attribute :license, :string
     attribute :uri_prefix, :string
     attribute :concept_uri_template, :string
+    attribute :compiled_formats, :string, collection: true
     attribute :external_references, :hash, collection: true
 
     key_value do
@@ -39,6 +40,7 @@ module Glossarist
       map :license, to: :license
       map :uri_prefix, to: :uri_prefix
       map :concept_uri_template, to: :concept_uri_template
+      map :compiled_formats, to: :compiled_formats
       map :external_references, to: :external_references
     end
 
@@ -59,6 +61,7 @@ module Glossarist
         statistics: stats,
         uri_prefix: options[:uri_prefix],
         concept_uri_template: options[:concept_uri_template],
+        compiled_formats: options[:compiled_formats] || [],
         external_references: derive_external_references(concepts),
       )
     end