gfa 0.1.1 → 0.2.0
This diff represents the content of publicly available package versions that have been released to one of the supported registries. The information contained in this diff is provided for informational purposes only and reflects changes between package versions as they appear in their respective public registries.
- checksums.yaml +5 -5
- data/Gemfile +9 -0
- data/LICENSE +201 -0
- data/README.md +108 -0
- data/Rakefile +17 -0
- data/lib/gfa/common.rb +39 -0
- data/lib/gfa/field/char.rb +9 -0
- data/lib/gfa/field/float.rb +9 -0
- data/lib/gfa/field/hex.rb +9 -0
- data/lib/gfa/field/json.rb +9 -0
- data/lib/gfa/field/numarray.rb +24 -0
- data/lib/gfa/field/sigint.rb +9 -0
- data/lib/gfa/field/string.rb +9 -0
- data/lib/gfa/field.rb +47 -0
- data/lib/gfa/generator.rb +35 -0
- data/lib/gfa/graph.rb +99 -0
- data/lib/gfa/parser.rb +46 -0
- data/lib/gfa/record/comment.rb +10 -0
- data/lib/gfa/record/containment.rb +29 -0
- data/lib/gfa/record/header.rb +12 -0
- data/lib/gfa/record/jump.rb +45 -0
- data/lib/gfa/record/link.rb +49 -0
- data/lib/gfa/record/path.rb +19 -0
- data/lib/gfa/record/segment.rb +25 -0
- data/lib/gfa/record/walk.rb +20 -0
- data/lib/gfa/record.rb +96 -0
- data/lib/gfa/version.rb +7 -0
- data/lib/gfa.rb +4 -0
- data/test/common_test.rb +34 -0
- data/test/field_test.rb +50 -0
- data/test/parser_test.rb +47 -0
- data/test/record_test.rb +73 -0
- data/test/test_helper.rb +6 -0
- metadata +56 -18
metadata
CHANGED
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@@ -1,84 +1,122 @@
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--- !ruby/object:Gem::Specification
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name: gfa
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version: !ruby/object:Gem::Version
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-
version: 0.
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version: 0.2.0
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platform: ruby
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authors:
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- Luis M. Rodriguez-R
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-
autorequire:
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autorequire:
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bindir: bin
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cert_chain: []
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date:
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date: 2023-02-22 00:00:00.000000000 Z
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dependencies:
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- !ruby/object:Gem::Dependency
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name: rgl
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requirement: !ruby/object:Gem::Requirement
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requirements:
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-
- - ~>
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+
- - "~>"
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- !ruby/object:Gem::Version
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version: '0.5'
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type: :runtime
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prerelease: false
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version_requirements: !ruby/object:Gem::Requirement
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requirements:
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-
- - ~>
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- - "~>"
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- !ruby/object:Gem::Version
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version: '0.5'
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- !ruby/object:Gem::Dependency
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name: rake
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requirement: !ruby/object:Gem::Requirement
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requirements:
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-
- -
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- - ">="
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- !ruby/object:Gem::Version
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version: '0'
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type: :development
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prerelease: false
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version_requirements: !ruby/object:Gem::Requirement
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requirements:
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-
- -
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+
- - ">="
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- !ruby/object:Gem::Version
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version: '0'
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- !ruby/object:Gem::Dependency
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name: test-unit
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requirement: !ruby/object:Gem::Requirement
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requirements:
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-
- -
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- - ">="
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- !ruby/object:Gem::Version
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version: '0'
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type: :development
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prerelease: false
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version_requirements: !ruby/object:Gem::Requirement
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requirements:
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-
- -
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- - ">="
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- !ruby/object:Gem::Version
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version: '0'
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description: GFA is a graph representation of fragment assemblies
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email: lmrodriguezr@gmail.com
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executables: []
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extensions: []
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extra_rdoc_files:
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-
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extra_rdoc_files:
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- README.md
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files:
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- Gemfile
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- LICENSE
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- README.md
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- Rakefile
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- lib/gfa.rb
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- lib/gfa/common.rb
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- lib/gfa/field.rb
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- lib/gfa/field/char.rb
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- lib/gfa/field/float.rb
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- lib/gfa/field/hex.rb
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- lib/gfa/field/json.rb
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- lib/gfa/field/numarray.rb
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- lib/gfa/field/sigint.rb
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- lib/gfa/field/string.rb
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- lib/gfa/generator.rb
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- lib/gfa/graph.rb
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- lib/gfa/parser.rb
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- lib/gfa/record.rb
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- lib/gfa/record/comment.rb
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- lib/gfa/record/containment.rb
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- lib/gfa/record/header.rb
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- lib/gfa/record/jump.rb
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- lib/gfa/record/link.rb
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- lib/gfa/record/path.rb
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- lib/gfa/record/segment.rb
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- lib/gfa/record/walk.rb
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- lib/gfa/version.rb
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- test/common_test.rb
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- test/field_test.rb
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- test/parser_test.rb
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- test/record_test.rb
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- test/test_helper.rb
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homepage: https://github.com/lmrodriguezr/gfa
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licenses: []
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metadata: {}
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post_install_message:
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rdoc_options:
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post_install_message:
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rdoc_options:
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- lib
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- README.md
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- "--main"
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- README.md
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- "--title"
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- Graphical Fragment Assembly (GFA) for Ruby
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require_paths:
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- lib
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required_ruby_version: !ruby/object:Gem::Requirement
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requirements:
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-
- -
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- - ">="
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- !ruby/object:Gem::Version
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version: '0'
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required_rubygems_version: !ruby/object:Gem::Requirement
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requirements:
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-
- -
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- - ">="
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- !ruby/object:Gem::Version
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version: '0'
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requirements: []
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-
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signing_key:
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rubygems_version: 3.2.3
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signing_key:
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specification_version: 4
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summary: Graphical Fragment Assembly (GFA) for Ruby
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test_files: []
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