genomer-plugin-view 0.0.3 → 0.0.4

data/.travis.yml

@@ -0,0 +1,4 @@
+language: ruby
+rvm:
+  - 1.8.7
+  - 1.9.3

data/genomer-plugin-view.gemspec

@@ -16,7 +16,7 @@ Gem::Specification.new do |s|
   s.required_rubygems_version = "~> 1.8.0"
   s.rubyforge_project         = "genomer-view-plugin"
 
-  s.add_dependency "genomer", ">= 0.0.5"
+  s.add_dependency "genomer", ">= 0.0.6"
 
   # Specs
   s.add_development_dependency "rspec",                   "~> 2.9.0"

data/lib/genomer-plugin-view/table.rb

@@ -38,7 +38,7 @@ class GenomerPluginView::Table < Genomer::Plugin
 
         if name
           name = name.clone
-          name[0] = name[0].upcase
+          name[0,1] = name[0,1].upcase
           prdt, ftn = name,prdt
         end
 

data/lib/genomer-plugin-view/version.rb

@@ -1,3 +1,3 @@
 class GenomerViewPlugin
-  VERSION = "0.0.3"
+  VERSION = "0.0.4"
 end

data/spec/genomer-view-plugin/table_spec.rb

@@ -187,7 +187,7 @@ describe GenomerPluginView::Table do
       end
 
       it "should set the capitalise value to the product key" do
-        subject.should == cds({:attributes => {'product' => 'AbcD'}})
+        subject.should have_identical_attributes cds({:attributes => {'product' => 'AbcD'}})
       end
 
     end
@@ -203,7 +203,7 @@ describe GenomerPluginView::Table do
       end
 
       it "should not change attributes" do
-        subject.should == cds({:attributes => attributes})
+        subject.should have_identical_attributes cds({:attributes => attributes})
       end
 
     end
@@ -219,7 +219,7 @@ describe GenomerPluginView::Table do
       end
 
       it "should not change attributes" do
-        subject.should == cds({:attributes => attributes})
+        subject.should have_identical_attributes cds({:attributes => attributes})
       end
 
     end
@@ -227,7 +227,7 @@ describe GenomerPluginView::Table do
     describe "passed a gene with product and function attributes" do
 
       let(:attributes) do
-        {'product' => 'abcd','function' => 'efgh'}
+        {'product' => 'abcd', 'function' => 'efgh'}
       end
 
       let(:annotations) do
@@ -235,7 +235,7 @@ describe GenomerPluginView::Table do
       end
 
       it "should not change attributes" do
-        subject.should == cds({:attributes => attributes})
+        subject.should have_identical_attributes cds({:attributes => attributes})
       end
 
     end
@@ -251,7 +251,7 @@ describe GenomerPluginView::Table do
       end
 
       it "should map Name to product and product to function" do
-        subject.should == cds({:attributes =>
+        subject.should have_identical_attributes cds({:attributes =>
           {'product' => 'AbcD','function' => 'efgh'}})
       end
 
@@ -268,7 +268,7 @@ describe GenomerPluginView::Table do
       end
 
       it "should map Name to product and product to function" do
-        subject.should == cds({:attributes =>
+        subject.should have_identical_attributes cds({:attributes =>
           {'product' => 'AbcD','function' => 'efgh'}})
       end
 

data/spec/spec_helper.rb

@@ -29,4 +29,11 @@ RSpec.configure do |config|
   def cds(opts = Hash.new)
     gene({:feature => 'CDS'}.merge(opts))
   end
+
+  class Bio::GFF::GFF3::Record
+    def has_identical_attributes?(other)
+      self.attributes.sort == other.attributes.sort
+    end
+  end
+
 end

metadata

@@ -1,7 +1,7 @@
 --- !ruby/object:Gem::Specification
 name: genomer-plugin-view
 version: !ruby/object:Gem::Version
-  version: 0.0.3
+  version: 0.0.4
   prerelease: 
 platform: ruby
 authors:
@@ -9,7 +9,7 @@ authors:
 autorequire: 
 bindir: bin
 cert_chain: []
-date: 2012-05-29 00:00:00.000000000 Z
+date: 2013-01-16 00:00:00.000000000 Z
 dependencies:
 - !ruby/object:Gem::Dependency
   name: genomer
@@ -18,7 +18,7 @@ dependencies:
     requirements:
     - - ! '>='
       - !ruby/object:Gem::Version
-        version: 0.0.5
+        version: 0.0.6
   type: :runtime
   prerelease: false
   version_requirements: !ruby/object:Gem::Requirement
@@ -26,7 +26,7 @@ dependencies:
     requirements:
     - - ! '>='
       - !ruby/object:Gem::Version
-        version: 0.0.5
+        version: 0.0.6
 - !ruby/object:Gem::Dependency
   name: rspec
   requirement: !ruby/object:Gem::Requirement
@@ -132,6 +132,7 @@ extra_rdoc_files: []
 files:
 - .document
 - .gitignore
+- .travis.yml
 - Gemfile
 - LICENSE.txt
 - README.rdoc
@@ -179,7 +180,7 @@ required_ruby_version: !ruby/object:Gem::Requirement
       version: '0'
       segments:
       - 0
-      hash: -3689932046879280024
+      hash: 2531486959390668075
 required_rubygems_version: !ruby/object:Gem::Requirement
   none: false
   requirements: