galaaz 0.5.0 → 2.0.0

data/specs/unboxing_recursion_regression_spec.rb

@@ -0,0 +1,30 @@
+# frozen_string_literal: true
+
+require 'galaaz'
+require 'tmpdir'
+
+describe 'Unboxing recursion regression' do
+  it 'unboxes Arrow/dplyr collected scalar views without stack overflow' do
+    ok = R::Support.eval("requireNamespace('arrow', quietly=TRUE) && requireNamespace('dplyr', quietly=TRUE)")
+    skip 'arrow/dplyr not available' unless ok == true
+
+    path = File.join(Dir.tmpdir, 'galaaz_unboxing_recursion.parquet')
+    df = R.data__frame(group: R.c('a', 'a', 'b', 'b'), value: R.c(1, 2, 3, 4))
+    R::Arrow.write_parquet(df, path)
+
+    ds = R::Arrow.dataset(path)
+    grouped = R.dplyr___group_by(ds, :group)
+    summarised = R.dplyr___summarise(grouped, total: E.sum(:value))
+    collected = R.dplyr___collect(summarised)
+
+    # These are scalar views represented as one-column data.frame handles in this path.
+    total_cell = collected[[1, 'total']]
+    group_cell = collected[[1, 'group']]
+    expect(total_cell).to be_a(R::DataFrame)
+    expect(group_cell).to be_a(R::DataFrame)
+
+    # Regression target: this used to recurse until stack overflow.
+    expect(total_cell >> 0).to eq 3
+    expect(group_cell >> 0).to eq 'a'
+  end
+end

data/specs/unboxing_spec.rb

@@ -0,0 +1,49 @@
+# -*- coding: utf-8 -*-
+# Specs for unboxing semantics: recurse until only Ruby values; single list → [x];
+# depth limit raises UnboxDepthError. Run with: bin/run_rspec specs/unboxing_spec.rb
+
+require 'galaaz'
+
+describe "Unboxing (>> nil / to_ruby / unboxed_get(nil))" do
+
+  context "single scalar (length-1 vector)" do
+    it "unboxes to Ruby scalar" do
+      expect(R.c(42) >> nil).to eq 42
+      expect(R.c(3.14) >> nil).to eq 3.14
+      expect(R.c(true) >> nil).to eq true
+      expect(R.c("hello") >> nil).to eq "hello"
+    end
+  end
+
+  context "single list (list of one element)" do
+    it "unboxes to Array with one element" do
+      lst = R.list(42)
+      expect(lst >> nil).to eq [42]
+    end
+
+    it "unboxes single list with vector to [array]" do
+      lst = R.list(R.c(1, 2, 3))
+      expect(lst >> nil).to eq [[1, 2, 3]]
+    end
+  end
+
+  context "nested list" do
+    it "unboxes to nested Ruby arrays" do
+      lst = R.list(R.list(1, 2), R.list(3, 4))
+      expect(lst >> nil).to eq [[1, 2], [3, 4]]
+    end
+
+    it "unboxes list of list of scalar" do
+      lst = R.list(R.list(10))
+      expect(lst >> nil).to eq [[10]]
+    end
+  end
+
+  context "list too deep" do
+    it "raises R::UnboxDepthError when depth exceeds MAX_UNBOX_DEPTH" do
+      deep = R.list(1)
+      (R::Support::MAX_UNBOX_DEPTH - 1).times { deep = R.list(deep) }
+      expect { deep >> nil }.to raise_error(R::UnboxDepthError, /list too deep/)
+    end
+  end
+end

data/specs/verify_callbacks.rb

@@ -0,0 +1,42 @@
+
+$LOAD_PATH.unshift File.expand_path('../lib', __FILE__)
+require 'galaaz'
+
+puts "Testing Galaaz 2.0 Callbacks..."
+
+# Define a Ruby callback
+my_ruby_proc = Proc.new do
+  puts "JRuby: Callback reached!"
+  42.0
+end
+
+# In R, we'll use 'lapply' or a simple call to trigger the callback
+# parse_arg will wrap my_ruby_proc in an R function
+begin
+  # A better way: define a helper in R that calls its argument
+  puts "Defining R helper function 'call_me'..."
+  R.bridge.eval_r("call_me <- function(f) { f() }")
+  
+  puts "Calling R 'call_me' with Ruby Proc..."
+  # R.call_me will trigger method_missing -> process_missing -> exec_function
+  # which will then call call_me(wrapper_function)
+  result = R.call_me(my_ruby_proc)
+  
+  puts "Handle from R: #{result.r_interop}"
+  puts "String representation from R: #{result.to_s}"
+  
+  unboxed = result >> nil
+  puts "Unboxed result from R: #{unboxed.inspect}"
+  
+  if unboxed == 42.0 || unboxed == 42
+    puts "SUCCESS: Callback worked!"
+  else
+    puts "FAILURE: Unexpected unboxed result: #{unboxed.inspect}"
+  end
+
+rescue => e
+  puts "Error during callback test: #{e.message}"
+  puts e.backtrace.join("\n")
+ensure
+  R.bridge.close
+end

data/version.rb

@@ -1,2 +1,2 @@
 $gem_name = "galaaz"
-$version="0.5.0"
+$version="2.0.0"

metadata

@@ -1,24 +1,37 @@
 --- !ruby/object:Gem::Specification
 name: galaaz
 version: !ruby/object:Gem::Version
-  version: 0.5.0
+  version: 2.0.0
 platform: ruby
 authors:
 - Rodrigo Botafogo
-autorequire: 
 bindir: bin
 cert_chain: []
-date: 2020-06-06 00:00:00.000000000 Z
+date: 2026-08-17 00:00:00.000000000 Z
 dependencies:
 - !ruby/object:Gem::Dependency
-  name: rspec
+  name: msgpack
+  requirement: !ruby/object:Gem::Requirement
+    requirements:
+    - - "~>"
+      - !ruby/object:Gem::Version
+        version: '1.0'
+  type: :runtime
   prerelease: false
+  version_requirements: !ruby/object:Gem::Requirement
+    requirements:
+    - - "~>"
+      - !ruby/object:Gem::Version
+        version: '1.0'
+- !ruby/object:Gem::Dependency
+  name: rspec
   requirement: !ruby/object:Gem::Requirement
     requirements:
     - - "~>"
       - !ruby/object:Gem::Version
         version: '3.8'
   type: :development
+  prerelease: false
   version_requirements: !ruby/object:Gem::Requirement
     requirements:
     - - "~>"
@@ -26,13 +39,13 @@ dependencies:
         version: '3.8'
 - !ruby/object:Gem::Dependency
   name: simplecov
-  prerelease: false
   requirement: !ruby/object:Gem::Requirement
     requirements:
     - - "~>"
       - !ruby/object:Gem::Version
         version: '0.16'
   type: :development
+  prerelease: false
   version_requirements: !ruby/object:Gem::Requirement
     requirements:
     - - "~>"
@@ -40,46 +53,52 @@ dependencies:
         version: '0.16'
 - !ruby/object:Gem::Dependency
   name: rdoc
-  prerelease: false
   requirement: !ruby/object:Gem::Requirement
     requirements:
-    - - "~>"
+    - - ">="
       - !ruby/object:Gem::Version
-        version: '5.0'
+        version: 6.1.2.1
   type: :development
+  prerelease: false
   version_requirements: !ruby/object:Gem::Requirement
     requirements:
-    - - "~>"
+    - - ">="
       - !ruby/object:Gem::Version
-        version: '5.0'
-description: "Galaaz brings the power of R to the Ruby community. Galaaz \nis based
-  on TruffleRuby and FastR, GraalVM-based interpreters for Ruby and the R language
-  \nfor statistical computing respectively.\n\nOver the past two decades, the R language
-  for statistical computing has emerged as the de \nfacto standard for analysts, statisticians,
-  and scientists. Today, a wide range of \nenterprises – from pharmaceuticals to insurance
-  – depend on R for key business uses. FastR \nis a new implementation of the R language
-  and environment for the Graal Virtual Machine.\n\nGalaaz tightly couples Ruby and
-  R and allows the use of R inside a Ruby script. In a sense, \nGalaaz is similar
-  to other solutions such as RinRuby, Rpy2, PipeR, and reticulate \n(https://blog.rstudio.com/2018/03/26/reticulate-r-interface-to-python/).
-  However, since \nGalaaz couples TruffleRuby and FastR that both target the JVM there
-  is no need to integrate \nboth solutions and there is no need to send data between
-  Ruby and R, as it all resides in \nthe same VM. \n\nFurther, installation of Galaaz
-  does not require the installation of GNU R. When installing\nGraalVM, just install
-  TruffleRuby and FastR.\n"
+        version: 6.1.2.1
+description: |
+  Galaaz brings the full R ecosystem to Ruby developers. Galaaz 2.0 runs Ruby on JRuby and
+  talks to standard GNU R—the same R you use with CRAN and Bioconductor—in a separate
+  process. A bridge handles requests, results, and typing so you can drive R from Ruby
+  (for example calling R functions, loading packages, and working with R objects) without
+  giving up multithreaded JRuby for application code.
+
+  Like RinRuby, rpy2, or reticulate, Galaaz is a cross-language bridge; unlike embedding a
+  second interpreter in one VM, using GNU R means compiled R packages and Bioconductor work
+  as usual. Large tables can optionally flow through Apache Arrow on the R side when you use
+  the helpers described in the project documentation.
+
+  You need both JRuby and a working GNU R installation in PATH for the bridge to run.
+  Build the native gatekeeper after install with: make -C ext/new_bridge all
 email: rodrigo.a.botafogo@gmail.com
 executables:
 - galaaz
-- gstudio
+- gbookdown
 - gknit
-- grun
 - gknit-draft
+- grun
+- gstudio
 extensions: []
 extra_rdoc_files: []
 files:
+- CHANGELOG.md
 - LICENSE
 - README.md
 - Rakefile
 - bin/galaaz
+- bin/galaaz-bootstrap
+- bin/galaaz-jruby
+- bin/galaaz_jruby_env.inc.sh
+- bin/gbookdown
 - bin/gknit
 - bin/gknit-draft
 - bin/gknit-draft.rb
@@ -88,45 +107,56 @@ files:
 - bin/gstudio
 - bin/gstudio_irb.rb
 - bin/gstudio_pry.rb
+- bin/install-tinytex
+- bin/run_all_rspec
+- bin/run_example
+- bin/run_old_rspec
+- bin/run_rspec
+- bin/run_rspec_subset
+- bin/run_slow_rspec
+- blogs/R-on-Rails-Planning-Document.md
+- blogs/README.md
 - blogs/galaaz_ggplot/galaaz_ggplot.Rmd
-- blogs/galaaz_ggplot/galaaz_ggplot.html
+- blogs/galaaz_ggplot/galaaz_ggplot.log
 - blogs/galaaz_ggplot/galaaz_ggplot.md
-- blogs/galaaz_ggplot/galaaz_ggplot.pdf
+- blogs/galaaz_ggplot/galaaz_ggplot.tex
 - blogs/galaaz_ggplot/galaaz_ggplot_files/figure-html/midwest_rb.png
 - blogs/galaaz_ggplot/galaaz_ggplot_files/figure-html/scatter_plot_rb.png
+- blogs/galaaz_ggplot/galaaz_ggplot_files/figure-markdown_github/midwest_rb.png
+- blogs/galaaz_ggplot/galaaz_ggplot_files/figure-markdown_github/scatter_plot_rb.png
 - blogs/galaaz_ggplot/midwest.Rmd
-- blogs/galaaz_ggplot/midwest.html
 - blogs/galaaz_ggplot/midwest_external_png
 - blogs/gknit/gknit.Rmd
-- blogs/gknit/gknit.html
-- blogs/gknit/gknit.pdf
+- blogs/gknit/gknit.md
+- blogs/gknit/gknit_files/figure-html/bubble-1.png
+- blogs/gknit/gknit_files/figure-html/diverging_bar.png
 - blogs/gknit/lst.rds
 - blogs/gknit/model.rb
 - blogs/gknit/stats.bib
+- blogs/manual/include_model_local_repro.Rmd
+- blogs/manual/include_model_local_repro.md
 - blogs/manual/lst.rds
 - blogs/manual/manual.Rmd
-- blogs/manual/manual.html
+- blogs/manual/manual.log
 - blogs/manual/manual.md
-- blogs/manual/manual.pdf
 - blogs/manual/manual.tex
 - blogs/manual/manual_files/figure-html/bubble-1.png
 - blogs/manual/manual_files/figure-html/diverging_bar.png
 - blogs/manual/manual_files/figure-latex/bubble-1.png
-- blogs/manual/manual_files/figure-latex/diverging_bar.pdf
 - blogs/manual/model.rb
 - blogs/nse_dplyr/nse_dplyr.Rmd
-- blogs/nse_dplyr/nse_dplyr.html
+- blogs/nse_dplyr/nse_dplyr.log
 - blogs/nse_dplyr/nse_dplyr.md
-- blogs/nse_dplyr/nse_dplyr.pdf
 - blogs/oh_my/not_so.rb
 - blogs/oh_my/oh_my.Rmd
-- blogs/oh_my/oh_my.html
+- blogs/oh_my/oh_my.log
 - blogs/oh_my/oh_my.md
+- blogs/oh_my/oh_my.tex
 - blogs/oh_my/old.Rmd
 - blogs/ruby_plot/ruby_plot.Rmd
-- blogs/ruby_plot/ruby_plot.html
+- blogs/ruby_plot/ruby_plot.log
 - blogs/ruby_plot/ruby_plot.md
-- blogs/ruby_plot/ruby_plot.pdf
+- blogs/ruby_plot/ruby_plot.tex
 - blogs/ruby_plot/ruby_plot_files/figure-html/dose_len.png
 - blogs/ruby_plot/ruby_plot_files/figure-html/facet_by_delivery.png
 - blogs/ruby_plot/ruby_plot_files/figure-html/facet_by_dose.png
@@ -138,6 +168,18 @@ files:
 - blogs/ruby_plot/ruby_plot_files/figure-html/final_box_plot.png
 - blogs/ruby_plot/ruby_plot_files/figure-html/final_violin_plot.png
 - blogs/ruby_plot/ruby_plot_files/figure-html/violin_with_jitter.png
+- blogs/ruby_plot/ruby_plot_files/figure-latex/dose_len.png
+- blogs/ruby_plot/ruby_plot_files/figure-latex/facet_by_delivery.png
+- blogs/ruby_plot/ruby_plot_files/figure-latex/facet_by_dose.png
+- blogs/ruby_plot/ruby_plot_files/figure-latex/facets_by_delivery_color.png
+- blogs/ruby_plot/ruby_plot_files/figure-latex/facets_by_delivery_color2.png
+- blogs/ruby_plot/ruby_plot_files/figure-latex/facets_with_decorations.png
+- blogs/ruby_plot/ruby_plot_files/figure-latex/facets_with_jitter.png
+- blogs/ruby_plot/ruby_plot_files/figure-latex/facets_with_points.png
+- blogs/ruby_plot/ruby_plot_files/figure-latex/final_box_plot.png
+- blogs/ruby_plot/ruby_plot_files/figure-latex/final_violin_plot.png
+- blogs/ruby_plot/ruby_plot_files/figure-latex/violin_with_jitter.png
+- blogs/test/test.Rmd
 - examples/50Plots_MasterList/Images/midwest-scatterplot.PNG
 - examples/50Plots_MasterList/ScatterPlot.rb
 - examples/50Plots_MasterList/scatter_plot.rb
@@ -145,6 +187,13 @@ files:
 - examples/Bibliography/stats.bib
 - examples/R/calc.R
 - examples/R/java_interop.R
+- examples/bioconductor_deseq2_airway/Documentation/DESeq2-airway-walkthrough.md
+- examples/bioconductor_deseq2_airway/bench_galaaz_three_same_process.rb
+- examples/bioconductor_deseq2_airway/bench_r_three_same_process.R
+- examples/bioconductor_deseq2_airway/deseq2_airway_galaaz.rb
+- examples/bioconductor_deseq2_airway/deseq2_airway_galaaz_optimized.rb
+- examples/bioconductor_deseq2_airway/deseq2_airway_minimal.R
+- examples/bioconductor_deseq2_airway/deseq2_airway_pipeline_for_bench.R
 - examples/islr/all.rb
 - examples/islr/ch2.spec.rb
 - examples/islr/ch3.spec.rb
@@ -158,39 +207,31 @@ files:
 - examples/latex_templates/Test-acm_article/sensys-abstract.cls
 - examples/latex_templates/Test-acm_article/sigproc.bib
 - examples/latex_templates/Test-acs_article/Test-acs_article.Rmd
-- examples/latex_templates/Test-acs_article/Test-acs_article.pdf
 - examples/latex_templates/Test-acs_article/acs-Test-acs_article.bib
 - examples/latex_templates/Test-acs_article/acs-my_output.bib
 - examples/latex_templates/Test-acs_article/acstest.bib
 - examples/latex_templates/Test-aea_article/AEA.cls
 - examples/latex_templates/Test-aea_article/BibFile.bib
 - examples/latex_templates/Test-aea_article/Test-aea_article.Rmd
-- examples/latex_templates/Test-aea_article/Test-aea_article.pdf
 - examples/latex_templates/Test-aea_article/aea.bst
 - examples/latex_templates/Test-aea_article/multicol.sty
 - examples/latex_templates/Test-aea_article/references.bib
 - examples/latex_templates/Test-aea_article/setspace.sty
 - examples/latex_templates/Test-amq_article/Test-amq_article.Rmd
-- examples/latex_templates/Test-amq_article/Test-amq_article.pdf
 - examples/latex_templates/Test-amq_article/Test-amq_article.pdfsync
-- examples/latex_templates/Test-amq_article/pics/Figure2.pdf
 - examples/latex_templates/Test-ams_article/Test-ams_article.Rmd
 - examples/latex_templates/Test-ams_article/amstest.bib
 - examples/latex_templates/Test-asa_article/Test-asa_article.Rmd
-- examples/latex_templates/Test-asa_article/Test-asa_article.pdf
 - examples/latex_templates/Test-asa_article/agsm.bst
 - examples/latex_templates/Test-asa_article/bibliography.bib
 - examples/latex_templates/Test-ieee_article/IEEEtran.bst
 - examples/latex_templates/Test-ieee_article/IEEEtran.cls
 - examples/latex_templates/Test-ieee_article/Test-ieee_article.Rmd
-- examples/latex_templates/Test-ieee_article/Test-ieee_article.pdf
 - examples/latex_templates/Test-ieee_article/mybibfile.bib
 - examples/latex_templates/Test-rjournal_article/RJournal.sty
 - examples/latex_templates/Test-rjournal_article/RJreferences.bib
-- examples/latex_templates/Test-rjournal_article/RJwrapper.pdf
 - examples/latex_templates/Test-rjournal_article/Test-rjournal_article.Rmd
 - examples/latex_templates/Test-springer_article/Test-springer_article.Rmd
-- examples/latex_templates/Test-springer_article/Test-springer_article.pdf
 - examples/latex_templates/Test-springer_article/bibliography.bib
 - examples/latex_templates/Test-springer_article/spbasic.bst
 - examples/latex_templates/Test-springer_article/spmpsci.bst
@@ -201,19 +242,16 @@ files:
 - examples/misc/ggplot.rb
 - examples/misc/moneyball.rb
 - examples/misc/subsetting.rb
+- examples/multithread_shards_to_r/shards_to_r.rb
 - examples/rmarkdown/svm-rmarkdown-anon-ms-example/svm-rmarkdown-anon-ms-example.Rmd
-- examples/rmarkdown/svm-rmarkdown-anon-ms-example/svm-rmarkdown-anon-ms-example.pdf
 - examples/rmarkdown/svm-rmarkdown-article-example/svm-rmarkdown-article-example.Rmd
-- examples/rmarkdown/svm-rmarkdown-article-example/svm-rmarkdown-article-example.pdf
 - examples/rmarkdown/svm-rmarkdown-beamer-example/svm-rmarkdown-beamer-example.Rmd
-- examples/rmarkdown/svm-rmarkdown-beamer-example/svm-rmarkdown-beamer-example.pdf
 - examples/rmarkdown/svm-rmarkdown-cv/svm-rmarkdown-cv.Rmd
-- examples/rmarkdown/svm-rmarkdown-cv/svm-rmarkdown-cv.pdf
 - examples/rmarkdown/svm-rmarkdown-syllabus-example/attend-grade-relationships.csv
 - examples/rmarkdown/svm-rmarkdown-syllabus-example/svm-rmarkdown-syllabus-example.Rmd
-- examples/rmarkdown/svm-rmarkdown-syllabus-example/svm-rmarkdown-syllabus-example.pdf
 - examples/rmarkdown/svm-xaringan-example/svm-xaringan-example.Rmd
 - examples/sthda_ggplot/README.md
+- examples/sthda_ggplot/RUN.md
 - examples/sthda_ggplot/all.rb
 - examples/sthda_ggplot/one_variable_continuous/density_gg.rb
 - examples/sthda_ggplot/one_variable_continuous/geom_area.rb
@@ -242,13 +280,21 @@ files:
 - examples/sthda_ggplot/two_variables_disc_cont/geom_violin.rb
 - examples/sthda_ggplot/two_variables_disc_disc/geom_jitter.rb
 - examples/sthda_ggplot/two_variables_error/geom_crossbar.rb
+- ext/new_bridge/Makefile
+- ext/new_bridge/galaaz_gatekeeper_phase0.cpp
+- ext/new_bridge/galaaz_gatekeeper_phase1.cpp
+- lib/R_interface/galaaz_device.R
+- lib/R_interface/include_engine.R
+- lib/R_interface/new_bridge_adapter.rb
 - lib/R_interface/r.rb
+- lib/R_interface/r_arrow.rb
 - lib/R_interface/r_libs.R
 - lib/R_interface/r_methods.rb
 - lib/R_interface/r_module_s.rb
 - lib/R_interface/rbinary_operators.rb
 - lib/R_interface/rclosure.rb
 - lib/R_interface/rdata_frame.rb
+- lib/R_interface/rdevice.rb
 - lib/R_interface/rdevices.R
 - lib/R_interface/renvironment.rb
 - lib/R_interface/rexpression.rb
@@ -268,17 +314,65 @@ files:
 - lib/R_interface/runary_operators.rb
 - lib/R_interface/rvector.rb
 - lib/galaaz.rb
+- lib/galaaz_jruby.rb
 - lib/gknit.rb
+- lib/gknit/diagnostics.rb
 - lib/gknit/draft.rb
 - lib/gknit/include_engine.rb
 - lib/gknit/knitr_engine.rb
 - lib/gknit/rb_engine.rb
 - lib/gknit/ruby_engine.rb
+- lib/new_bridge.rb
+- lib/new_bridge/bootstrap/windows_bootstrap.rb
+- lib/new_bridge/envelope.rb
+- lib/new_bridge/eval_result.rb
+- lib/new_bridge/framing.rb
+- lib/new_bridge/instance_pool_client.rb
+- lib/new_bridge/r_instance_manager.rb
+- lib/new_bridge/session_client.rb
+- lib/new_bridge/tcp_framed.rb
 - lib/util/exec_ruby.rb
 - lib/util/inline_file.rb
+- new_bridge_specs/benchmark_phase5_5_unboxing_spec.rb
+- new_bridge_specs/eval_r_async_spec.rb
+- new_bridge_specs/integration_phase5_1_concurrent_spec.rb
+- new_bridge_specs/integration_phase5_1_eval_spec.rb
+- new_bridge_specs/integration_phase5_1_r_api_spec.rb
+- new_bridge_specs/integration_phase5_1_smoke_spec.rb
+- new_bridge_specs/integration_phase5_2_dataframe_unboxing_spec.rb
+- new_bridge_specs/integration_phase5_2_handle_eval_unboxing_spec.rb
+- new_bridge_specs/integration_phase5_3_callback_args_spec.rb
+- new_bridge_specs/integration_phase5_3_callback_error_spec.rb
+- new_bridge_specs/integration_phase5_3_callback_timeout_spec.rb
+- new_bridge_specs/integration_phase5_3_callbacks_smoke_spec.rb
+- new_bridge_specs/integration_phase5_3_edge_cases_spec.rb
+- new_bridge_specs/integration_phase5_3_nested_spec.rb
+- new_bridge_specs/integration_phase5_4_concurrent_sessions_spec.rb
+- new_bridge_specs/integration_phase5_4_nested_session_callbacks_spec.rb
+- new_bridge_specs/integration_phase5_4_session_routing_spec.rb
+- new_bridge_specs/integration_phase5_5_stress_concurrency_spec.rb
+- new_bridge_specs/integration_phase5_5_unbox_walk_spec.rb
+- new_bridge_specs/phase0_protocol_spec.rb
+- new_bridge_specs/phase1_req_ret_spec.rb
+- new_bridge_specs/phase2_multi_instance_spec.rb
+- new_bridge_specs/phase3_callbacks_spec.rb
+- new_bridge_specs/phase4_2_hardening_spec.rb
+- new_bridge_specs/phase4_3_r_instance_manager_spec.rb
+- new_bridge_specs/phase4_nested_callbacks_spec.rb
 - r_requires/ggplot.rb
 - r_requires/knitr.rb
 - specs/all.rb
+- specs/arrow_from_ruby_batches_spec.rb
+- specs/arrow_semantics_spec.rb
+- specs/bridge_concurrent_spec.rb
+- specs/bridge_nested_spec.rb
+- specs/dataframe_semantics_spec.rb
+- specs/dataframe_single_index_logical_filter_spec.rb
+- specs/dispatch_probe_cache_spec.rb
+- specs/dispatch_probe_error_class_fallback_spec.rb
+- specs/dispatch_probe_fallback_spec.rb
+- specs/environment_semantics_spec.rb
+- specs/field_access_spec.rb
 - specs/figures/bg.jpeg
 - specs/figures/bg.png
 - specs/figures/bg.svg
@@ -292,33 +386,70 @@ files:
 - specs/figures/width_height_units1.png
 - specs/figures/width_height_units2.jpeg
 - specs/figures/width_height_units2.png
-- specs/r_dataframe.spec.rb
+- specs/formula_semantics_spec.rb
+- specs/galaaz_util_exec_ruby_spec.rb
+- specs/galaaz_util_inline_file_spec.rb
+- specs/gknit_cli_option_permutation_spec.rb
+- specs/gknit_include_engine_spec.rb
+- specs/gknit_install_timeout_report_spec.rb
+- specs/gknit_internal_error_report_spec.rb
+- specs/gknit_vector_map_output_spec.rb
+- specs/globalenv_guardrail_spec.rb
+- specs/language_expression_semantics_spec.rb
+- specs/list_semantics_spec.rb
+- specs/new_bridge_bulk_dataframe_transfer_spec.rb
+- specs/new_bridge_bulk_vector_transfer_spec.rb
+- specs/new_bridge_callback_timeout_spec.rb
+- specs/new_bridge_eval_r_fallback_spec.rb
+- specs/nil_null_spec.rb
+- specs/object_build_phase2_spec.rb
+- specs/phase1_callback_bridge_spec.rb
+- specs/phase2_gknit_generic_rendering_guardrail_spec.rb
+- specs/phase2_gknit_no_raw_code_leakage_spec.rb
+- specs/phase3_gknit_generic_graphics_capture_spec.rb
+- specs/plot_device_semantics_spec.rb
+- specs/plot_snapshot_semantics_spec.rb
+- specs/protocol_result_spec.rb
+- specs/r_batch_fail_fast_spec.rb
+- specs/r_bridge_bootstrap_spec.rb
 - specs/r_devices.spec.rb
-- specs/r_environment.spec.rb
 - specs/r_eval.spec.rb
-- specs/r_formula.spec.rb
 - specs/r_function.spec.rb
-- specs/r_language.spec.rb
-- specs/r_list.spec.rb
+- specs/r_instance_manager_spec.rb
 - specs/r_list_apply.spec.rb
 - specs/r_matrix.spec.rb
 - specs/r_nse.spec.rb
-- specs/r_plots.spec.rb
+- specs/r_object_send_dispatch_spec.rb
+- specs/r_vector_comparator_spec.rb
 - specs/r_vector_creation.spec.rb
 - specs/r_vector_functions.spec.rb
 - specs/r_vector_object.spec.rb
 - specs/r_vector_operators.spec.rb
+- specs/r_vector_structured_scalar_reads_spec.rb
 - specs/r_vector_subsetting.spec.rb
-- specs/ruby_expression.spec.rb
+- specs/range_helper_spec.rb
+- specs/rsupport_scope_spec.rb
+- specs/rsupport_var_name_thread_safety_spec.rb
+- specs/scalar_character_spec.rb
+- specs/scoped_symbol_dsl_refinement_spec.rb
+- specs/session_env_bridge_spec.rb
+- specs/simplecov_bootstrap_spec.rb
+- specs/spec_helper.rb
 - specs/tmp.rb
+- specs/unboxing_recursion_regression_spec.rb
+- specs/unboxing_spec.rb
+- specs/verify_callbacks.rb
 - sty/galaaz.sty
 - version.rb
-homepage: http://github.com/rbotafogo/galaaz/wiki
+homepage: https://github.com/rbotafogo/galaaz
 licenses:
 - BSD-2-Clause
 metadata:
+  homepage_uri: https://github.com/rbotafogo/galaaz
+  source_code_uri: https://github.com/rbotafogo/galaaz
+  documentation_uri: https://rbotafogo.github.io/galaaz/
+  changelog_uri: https://github.com/rbotafogo/galaaz/blob/galaaz2_0/CHANGELOG.md
   yard.run: yri
-post_install_message: 
 rdoc_options: []
 require_paths:
 - lib
@@ -326,15 +457,14 @@ required_ruby_version: !ruby/object:Gem::Requirement
   requirements:
   - - ">="
     - !ruby/object:Gem::Version
-      version: '0'
+      version: '3.1'
 required_rubygems_version: !ruby/object:Gem::Requirement
   requirements:
   - - ">="
     - !ruby/object:Gem::Version
       version: '0'
 requirements: []
-rubygems_version: 3.0.3
-signing_key: 
+rubygems_version: 4.0.3
 specification_version: 4
 summary: Tightly coupling Ruby and R
 test_files: []