fhir_scorecard 1.8.0 → 3.0.1
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- checksums.yaml +4 -4
- data/.travis.yml +2 -1
- data/Gemfile +3 -0
- data/Gemfile.lock +12 -12
- data/fhir_scorecard.gemspec +2 -2
- data/lib/fhir_scorecard.rb +1 -0
- data/lib/implementation_guides.rb +184 -0
- data/lib/resources/profile_indicators.json +1633 -0
- data/lib/resources/standard_health_record/CodeSystem-shr-actor-LanguageQualifierCS.json +79 -0
- data/lib/resources/standard_health_record/CodeSystem-shr-base-GenericAnswersCS.json +54 -0
- data/lib/resources/standard_health_record/CodeSystem-shr-base-MissingValueReasonCS.json +80 -0
- data/lib/resources/standard_health_record/CodeSystem-shr-behavior-AlcoholUseScreeningToolCS.json +54 -0
- data/lib/resources/standard_health_record/CodeSystem-shr-behavior-DietNutritionConcernCS.json +129 -0
- data/lib/resources/standard_health_record/CodeSystem-shr-behavior-PhysicalActivityLimitationCS.json +99 -0
- data/lib/resources/standard_health_record/CodeSystem-shr-behavior-ReligiousPracticeStatusCS.json +54 -0
- data/lib/resources/standard_health_record/CodeSystem-shr-behavior-ReligiousRestrictionCS.json +55 -0
- data/lib/resources/standard_health_record/CodeSystem-shr-behavior-SleepQualityReasonCS.json +94 -0
- data/lib/resources/standard_health_record/CodeSystem-shr-behavior-SpecialDietFollowedCS.json +69 -0
- data/lib/resources/standard_health_record/CodeSystem-shr-behavior-SubstanceAbuseTreatmentTypeCS.json +94 -0
- data/lib/resources/standard_health_record/CodeSystem-shr-core-CodingQualifierCS.json +74 -0
- data/lib/resources/standard_health_record/CodeSystem-shr-core-PerformanceGradingScaleCS.json +65 -0
- data/lib/resources/standard_health_record/CodeSystem-shr-core-QualitativeDateTimeCS.json +139 -0
- data/lib/resources/standard_health_record/CodeSystem-shr-core-QualitativeFrequencyCS.json +64 -0
- data/lib/resources/standard_health_record/CodeSystem-shr-core-QualitativeLikelihoodCS.json +70 -0
- data/lib/resources/standard_health_record/CodeSystem-shr-core-QualitativeValueScaleCS.json +64 -0
- data/lib/resources/standard_health_record/CodeSystem-shr-core-SemiquantitativeDurationCS.json +84 -0
- data/lib/resources/standard_health_record/CodeSystem-shr-core-SemiquantitativeFrequencyCS.json +104 -0
- data/lib/resources/standard_health_record/CodeSystem-shr-core-SettingCS.json +210 -0
- data/lib/resources/standard_health_record/CodeSystem-shr-core-ThreePriorityCS.json +54 -0
- data/lib/resources/standard_health_record/CodeSystem-shr-core-ThreeValueLogicCS.json +54 -0
- data/lib/resources/standard_health_record/CodeSystem-shr-demographics-AddressUseCS.json +70 -0
- data/lib/resources/standard_health_record/CodeSystem-shr-demographics-InsuranceProviderTypeCS.json +74 -0
- data/lib/resources/standard_health_record/CodeSystem-shr-demographics-TelecomQualifierCS.json +99 -0
- data/lib/resources/standard_health_record/CodeSystem-shr-demographics-TelephoneTypeCS.json +49 -0
- data/lib/resources/standard_health_record/CodeSystem-shr-device-RespiratoryAssistDeviceCS.json +64 -0
- data/lib/resources/standard_health_record/CodeSystem-shr-device-RespiratoryRateSettingCS.json +69 -0
- data/lib/resources/standard_health_record/CodeSystem-shr-encounter-EncounterTypeCS.json +69 -0
- data/lib/resources/standard_health_record/CodeSystem-shr-encounter-EpisodeOfCareCompletionCS.json +89 -0
- data/lib/resources/standard_health_record/CodeSystem-shr-encounter-ReasonEncounterDidNotHappenCS.json +59 -0
- data/lib/resources/standard_health_record/CodeSystem-shr-encounter-ReferralSourceTypeCS.json +84 -0
- data/lib/resources/standard_health_record/CodeSystem-shr-encounter-TreatmentCooperationCS.json +59 -0
- data/lib/resources/standard_health_record/CodeSystem-shr-environment-AnimalExposureCS.json +84 -0
- data/lib/resources/standard_health_record/CodeSystem-shr-environment-CoinhabitantCS.json +74 -0
- data/lib/resources/standard_health_record/CodeSystem-shr-environment-HomeEnvironmentRiskCS.json +214 -0
- data/lib/resources/standard_health_record/CodeSystem-shr-environment-IncomeSourceCS.json +109 -0
- data/lib/resources/standard_health_record/CodeSystem-shr-environment-NonCashBenefitCS.json +89 -0
- data/lib/resources/standard_health_record/CodeSystem-shr-environment-ResourceStabilityCS.json +59 -0
- data/lib/resources/standard_health_record/CodeSystem-shr-lab-RequestStatusCS.json +59 -0
- data/lib/resources/standard_health_record/CodeSystem-shr-lifehistory-EducationalAttainmentCS.json +89 -0
- data/lib/resources/standard_health_record/CodeSystem-shr-lifehistory-EmploymentStatusCS.json +104 -0
- data/lib/resources/standard_health_record/CodeSystem-shr-lifehistory-MilitaryServiceDischargeStatusCS.json +64 -0
- data/lib/resources/standard_health_record/CodeSystem-shr-lifehistory-MilitaryServiceEraCS.json +80 -0
- data/lib/resources/standard_health_record/CodeSystem-shr-lifehistory-MilitaryStatusCS.json +54 -0
- data/lib/resources/standard_health_record/CodeSystem-shr-lifehistory-TeratogenCS.json +319 -0
- data/lib/resources/standard_health_record/CodeSystem-shr-lifehistory-USMilitaryBranchCS.json +74 -0
- data/lib/resources/standard_health_record/CodeSystem-shr-medication-MedicationChangeReasonCS.json +69 -0
- data/lib/resources/standard_health_record/CodeSystem-shr-medication-MedicationChangeTypeCS.json +64 -0
- data/lib/resources/standard_health_record/CodeSystem-shr-medication-ReasonMedicationNotUsedCS.json +89 -0
- data/lib/resources/standard_health_record/CodeSystem-shr-observation-ExposureReasonCS.json +75 -0
- data/lib/resources/standard_health_record/CodeSystem-shr-observation-ObservationNotMadeReasonCS.json +65 -0
- data/lib/resources/standard_health_record/CodeSystem-shr-problem-EvidenceQualityCS.json +54 -0
- data/lib/resources/standard_health_record/CodeSystem-shr-problem-GradeOrStageCS.json +64 -0
- data/lib/resources/standard_health_record/CodeSystem-shr-problem-ProblemCategoryCS.json +69 -0
- data/lib/resources/standard_health_record/CodeSystem-shr-sex-ContraceptiveMethodCS.json +129 -0
- data/lib/resources/standard_health_record/CodeSystem-shr-sex-ContraceptiveMethodReasonCS.json +64 -0
- data/lib/resources/standard_health_record/CodeSystem-shr-sex-ContraceptiveNotUsedReasonCS.json +89 -0
- data/lib/resources/standard_health_record/CodeSystem-shr-sex-GenderIdentityCS.json +74 -0
- data/lib/resources/standard_health_record/CodeSystem-shr-skin-PressureUlcerAssociationCS.json +49 -0
- data/lib/resources/standard_health_record/CodeSystem-shr-skin-SupportSurfaceBodyPositionCS.json +49 -0
- data/lib/resources/standard_health_record/CodeSystem-shr-skin-SupportSurfaceCategoryCS.json +74 -0
- data/lib/resources/standard_health_record/CodeSystem-shr-skin-SupportSurfaceComponentCS.json +99 -0
- data/lib/resources/standard_health_record/CodeSystem-shr-skin-SupportSurfaceFeatureCS.json +74 -0
- data/lib/resources/standard_health_record/CodeSystem-shr-vital-BloodPressureMethodCS.json +60 -0
- data/lib/resources/standard_health_record/CodeSystem-shr-vital-BloodPressureQualifierCS.json +70 -0
- data/lib/resources/standard_health_record/CodeSystem-shr-vital-BodyHeightQualifierCS.json +44 -0
- data/lib/resources/standard_health_record/CodeSystem-shr-vital-BodyTemperatureQualifierCS.json +44 -0
- data/lib/resources/standard_health_record/CodeSystem-shr-vital-BodyWeightQualifierCS.json +109 -0
- data/lib/resources/standard_health_record/CodeSystem-shr-vital-HeartRateMethodCS.json +75 -0
- data/lib/resources/standard_health_record/CodeSystem-shr-vital-HeartRateQualifierCS.json +65 -0
- data/lib/resources/standard_health_record/CodeSystem-shr-vital-RespiratoryRateMethodCS.json +70 -0
- data/lib/resources/standard_health_record/CodeSystem-shr-vital-RespiratoryRateQualifierCS.json +110 -0
- data/lib/resources/standard_health_record/ImplementationGuide-1.json +7079 -0
- data/lib/resources/standard_health_record/StructureDefinition-primitive-base64Binary-extension.json +215 -0
- data/lib/resources/standard_health_record/StructureDefinition-primitive-boolean-extension.json +215 -0
- data/lib/resources/standard_health_record/StructureDefinition-primitive-code-extension.json +215 -0
- data/lib/resources/standard_health_record/StructureDefinition-primitive-date-extension.json +215 -0
- data/lib/resources/standard_health_record/StructureDefinition-primitive-dateTime-extension.json +215 -0
- data/lib/resources/standard_health_record/StructureDefinition-primitive-decimal-extension.json +215 -0
- data/lib/resources/standard_health_record/StructureDefinition-primitive-id-extension.json +215 -0
- data/lib/resources/standard_health_record/StructureDefinition-primitive-instant-extension.json +215 -0
- data/lib/resources/standard_health_record/StructureDefinition-primitive-integer-extension.json +215 -0
- data/lib/resources/standard_health_record/StructureDefinition-primitive-markdown-extension.json +215 -0
- data/lib/resources/standard_health_record/StructureDefinition-primitive-oid-extension.json +215 -0
- data/lib/resources/standard_health_record/StructureDefinition-primitive-positiveInt-extension.json +215 -0
- data/lib/resources/standard_health_record/StructureDefinition-primitive-string-extension.json +215 -0
- data/lib/resources/standard_health_record/StructureDefinition-primitive-time-extension.json +215 -0
- data/lib/resources/standard_health_record/StructureDefinition-primitive-unsignedInt-extension.json +215 -0
- data/lib/resources/standard_health_record/StructureDefinition-primitive-uri-extension.json +215 -0
- data/lib/resources/standard_health_record/StructureDefinition-primitive-xhtml-extension.json +215 -0
- data/lib/resources/standard_health_record/StructureDefinition-shr-actor-Affiliation-extension.json +218 -0
- data/lib/resources/standard_health_record/StructureDefinition-shr-actor-AgeAtDeath-extension.json +367 -0
- data/lib/resources/standard_health_record/StructureDefinition-shr-actor-Anonymized-extension.json +216 -0
- data/lib/resources/standard_health_record/StructureDefinition-shr-actor-DateOfDeath-extension.json +367 -0
- data/lib/resources/standard_health_record/StructureDefinition-shr-actor-Deceased-extension.json +447 -0
- data/lib/resources/standard_health_record/StructureDefinition-shr-actor-EmergencyContact.json +1046 -0
- data/lib/resources/standard_health_record/StructureDefinition-shr-actor-FictionalPerson-extension.json +216 -0
- data/lib/resources/standard_health_record/StructureDefinition-shr-actor-LanguageQualifier-extension.json +230 -0
- data/lib/resources/standard_health_record/StructureDefinition-shr-actor-LanguageUsed-extension.json +487 -0
- data/lib/resources/standard_health_record/StructureDefinition-shr-actor-MedicalSpecialty-extension.json +230 -0
- data/lib/resources/standard_health_record/StructureDefinition-shr-actor-NoPrimaryCareProvider.json +1417 -0
- data/lib/resources/standard_health_record/StructureDefinition-shr-actor-Organization.json +951 -0
- data/lib/resources/standard_health_record/StructureDefinition-shr-actor-Participant-extension.json +621 -0
- data/lib/resources/standard_health_record/StructureDefinition-shr-actor-ParticipationType-extension.json +218 -0
- data/lib/resources/standard_health_record/StructureDefinition-shr-actor-Practitioner-extension.json +218 -0
- data/lib/resources/standard_health_record/StructureDefinition-shr-actor-Practitioner.json +1205 -0
- data/lib/resources/standard_health_record/StructureDefinition-shr-actor-PrimaryCareProvider.json +986 -0
- data/lib/resources/standard_health_record/StructureDefinition-shr-actor-ProviderRelationship.json +1028 -0
- data/lib/resources/standard_health_record/StructureDefinition-shr-actor-RelatedPerson-extension.json +218 -0
- data/lib/resources/standard_health_record/StructureDefinition-shr-actor-RelatedPerson.json +900 -0
- data/lib/resources/standard_health_record/StructureDefinition-shr-actor-SpokenLanguageProficiency-extension.json +230 -0
- data/lib/resources/standard_health_record/StructureDefinition-shr-actor-WrittenLanguageProficiency-extension.json +230 -0
- data/lib/resources/standard_health_record/StructureDefinition-shr-adverse-AdverseReaction-extension.json +218 -0
- data/lib/resources/standard_health_record/StructureDefinition-shr-adverse-AdverseReaction.json +1927 -0
- data/lib/resources/standard_health_record/StructureDefinition-shr-adverse-AdverseReactionAttribution-extension.json +407 -0
- data/lib/resources/standard_health_record/StructureDefinition-shr-adverse-AttributionCertainty-extension.json +230 -0
- data/lib/resources/standard_health_record/StructureDefinition-shr-allergy-AllergyIntolerance.json +1471 -0
- data/lib/resources/standard_health_record/StructureDefinition-shr-allergy-DrugAllergy.json +1487 -0
- data/lib/resources/standard_health_record/StructureDefinition-shr-allergy-FoodAllergy-extension.json +218 -0
- data/lib/resources/standard_health_record/StructureDefinition-shr-allergy-FoodAllergy.json +1487 -0
- data/lib/resources/standard_health_record/StructureDefinition-shr-allergy-NoKnownAllergy.json +1902 -0
- data/lib/resources/standard_health_record/StructureDefinition-shr-allergy-NoKnownDrugAllergy.json +1780 -0
- data/lib/resources/standard_health_record/StructureDefinition-shr-allergy-NoKnownEnvironmentalAllergy.json +1780 -0
- data/lib/resources/standard_health_record/StructureDefinition-shr-allergy-NoKnownFoodAllergy.json +1780 -0
- data/lib/resources/standard_health_record/StructureDefinition-shr-base-ActionCode-extension.json +218 -0
- data/lib/resources/standard_health_record/StructureDefinition-shr-base-AssociatedEncounter-extension.json +218 -0
- data/lib/resources/standard_health_record/StructureDefinition-shr-base-Author-extension.json +242 -0
- data/lib/resources/standard_health_record/StructureDefinition-shr-base-Entry.json +911 -0
- data/lib/resources/standard_health_record/StructureDefinition-shr-base-FocalSubject-extension.json +234 -0
- data/lib/resources/standard_health_record/StructureDefinition-shr-base-Informant-extension.json +234 -0
- data/lib/resources/standard_health_record/StructureDefinition-shr-base-Language-extension.json +230 -0
- data/lib/resources/standard_health_record/StructureDefinition-shr-base-Narrative.json +223 -0
- data/lib/resources/standard_health_record/StructureDefinition-shr-base-NonOccurrenceModifier-extension.json +407 -0
- data/lib/resources/standard_health_record/StructureDefinition-shr-base-OriginalCreationDate-extension.json +216 -0
- data/lib/resources/standard_health_record/StructureDefinition-shr-base-PatientInstructions-extension.json +216 -0
- data/lib/resources/standard_health_record/StructureDefinition-shr-base-PerformerInstructions-extension.json +216 -0
- data/lib/resources/standard_health_record/StructureDefinition-shr-base-ShrId-extension.json +216 -0
- data/lib/resources/standard_health_record/StructureDefinition-shr-base-SubjectIsThirdPartyModifier-extension.json +216 -0
- data/lib/resources/standard_health_record/StructureDefinition-shr-behavior-AlcoholBingeFrequency-extension.json +534 -0
- data/lib/resources/standard_health_record/StructureDefinition-shr-behavior-AlcoholUse.json +3337 -0
- data/lib/resources/standard_health_record/StructureDefinition-shr-behavior-AssessmentTool-extension.json +218 -0
- data/lib/resources/standard_health_record/StructureDefinition-shr-behavior-BehavioralObservation.json +2461 -0
- data/lib/resources/standard_health_record/StructureDefinition-shr-behavior-DietAndNutrition.json +2721 -0
- data/lib/resources/standard_health_record/StructureDefinition-shr-behavior-DietNutritionConcern-extension.json +230 -0
- data/lib/resources/standard_health_record/StructureDefinition-shr-behavior-ExerciseHoursPerWeek-extension.json +216 -0
- data/lib/resources/standard_health_record/StructureDefinition-shr-behavior-HasSufficientFood-extension.json +229 -0
- data/lib/resources/standard_health_record/StructureDefinition-shr-behavior-HoursSleepPerNight-extension.json +216 -0
- data/lib/resources/standard_health_record/StructureDefinition-shr-behavior-IntravenousDrugUse.json +3360 -0
- data/lib/resources/standard_health_record/StructureDefinition-shr-behavior-NicotineUse.json +3344 -0
- data/lib/resources/standard_health_record/StructureDefinition-shr-behavior-ONCSmokingStatus.json +2373 -0
- data/lib/resources/standard_health_record/StructureDefinition-shr-behavior-PhysicalActivityLevel.json +2635 -0
- data/lib/resources/standard_health_record/StructureDefinition-shr-behavior-PhysicalActivityLimitation-extension.json +230 -0
- data/lib/resources/standard_health_record/StructureDefinition-shr-behavior-ReadinessToChange-extension.json +230 -0
- data/lib/resources/standard_health_record/StructureDefinition-shr-behavior-ReligiousPractice.json +2702 -0
- data/lib/resources/standard_health_record/StructureDefinition-shr-behavior-ReligiousPracticeStatus-extension.json +230 -0
- data/lib/resources/standard_health_record/StructureDefinition-shr-behavior-ReligiousRestriction-extension.json +230 -0
- data/lib/resources/standard_health_record/StructureDefinition-shr-behavior-SleepQuality.json +2782 -0
- data/lib/resources/standard_health_record/StructureDefinition-shr-behavior-SleepQualityReason-extension.json +230 -0
- data/lib/resources/standard_health_record/StructureDefinition-shr-behavior-SpecialDietFollowed-extension.json +230 -0
- data/lib/resources/standard_health_record/StructureDefinition-shr-behavior-SubstanceAbuseTreatment.json +1668 -0
- data/lib/resources/standard_health_record/StructureDefinition-shr-behavior-SubstanceUse.json +3048 -0
- data/lib/resources/standard_health_record/StructureDefinition-shr-behavior-TroubleFallingAsleep-extension.json +230 -0
- data/lib/resources/standard_health_record/StructureDefinition-shr-behavior-TroubleStayingAsleep-extension.json +230 -0
- data/lib/resources/standard_health_record/StructureDefinition-shr-behavior-ViolentBehaviorRisk.json +617 -0
- data/lib/resources/standard_health_record/StructureDefinition-shr-behavior-ViolentRiskToOthers-extension.json +419 -0
- data/lib/resources/standard_health_record/StructureDefinition-shr-behavior-ViolentRiskToSelf-extension.json +419 -0
- data/lib/resources/standard_health_record/StructureDefinition-shr-behavior-WakeFeelingRested-extension.json +230 -0
- data/lib/resources/standard_health_record/StructureDefinition-shr-core-Address.json +600 -0
- data/lib/resources/standard_health_record/StructureDefinition-shr-core-Age-extension.json +218 -0
- data/lib/resources/standard_health_record/StructureDefinition-shr-core-Age.json +358 -0
- data/lib/resources/standard_health_record/StructureDefinition-shr-core-AgeGroup-extension.json +230 -0
- data/lib/resources/standard_health_record/StructureDefinition-shr-core-AgeRange-extension.json +407 -0
- data/lib/resources/standard_health_record/StructureDefinition-shr-core-Annotation.json +255 -0
- data/lib/resources/standard_health_record/StructureDefinition-shr-core-Area-extension.json +226 -0
- data/lib/resources/standard_health_record/StructureDefinition-shr-core-BodySite-extension.json +218 -0
- data/lib/resources/standard_health_record/StructureDefinition-shr-core-BodySite.json +799 -0
- data/lib/resources/standard_health_record/StructureDefinition-shr-core-Circumference-extension.json +327 -0
- data/lib/resources/standard_health_record/StructureDefinition-shr-core-ClockDirection-extension.json +230 -0
- data/lib/resources/standard_health_record/StructureDefinition-shr-core-CodeableConcept-extension.json +218 -0
- data/lib/resources/standard_health_record/StructureDefinition-shr-core-CodeableConcept.json +252 -0
- data/lib/resources/standard_health_record/StructureDefinition-shr-core-Coding.json +393 -0
- data/lib/resources/standard_health_record/StructureDefinition-shr-core-CodingQualifier-extension.json +228 -0
- data/lib/resources/standard_health_record/StructureDefinition-shr-core-Count-extension.json +216 -0
- data/lib/resources/standard_health_record/StructureDefinition-shr-core-Country-extension.json +216 -0
- data/lib/resources/standard_health_record/StructureDefinition-shr-core-Depth-extension.json +226 -0
- data/lib/resources/standard_health_record/StructureDefinition-shr-core-Details-extension.json +216 -0
- data/lib/resources/standard_health_record/StructureDefinition-shr-core-DollarAmount.json +337 -0
- data/lib/resources/standard_health_record/StructureDefinition-shr-core-Duration-extension.json +218 -0
- data/lib/resources/standard_health_record/StructureDefinition-shr-core-Duration.json +358 -0
- data/lib/resources/standard_health_record/StructureDefinition-shr-core-EffectiveDate-extension.json +216 -0
- data/lib/resources/standard_health_record/StructureDefinition-shr-core-EffectiveTimePeriod-extension.json +218 -0
- data/lib/resources/standard_health_record/StructureDefinition-shr-core-EffectiveTimePeriod.json +235 -0
- data/lib/resources/standard_health_record/StructureDefinition-shr-core-Explanation-extension.json +216 -0
- data/lib/resources/standard_health_record/StructureDefinition-shr-core-Frequency-extension.json +407 -0
- data/lib/resources/standard_health_record/StructureDefinition-shr-core-GeneralizedAge-extension.json +461 -0
- data/lib/resources/standard_health_record/StructureDefinition-shr-core-GeneralizedDateTime-extension.json +461 -0
- data/lib/resources/standard_health_record/StructureDefinition-shr-core-GeneralizedLikelihood-extension.json +421 -0
- data/lib/resources/standard_health_record/StructureDefinition-shr-core-GeneralizedTemporalContext-extension.json +461 -0
- data/lib/resources/standard_health_record/StructureDefinition-shr-core-GeopoliticalLocation.json +606 -0
- data/lib/resources/standard_health_record/StructureDefinition-shr-core-Geoposition.json +909 -0
- data/lib/resources/standard_health_record/StructureDefinition-shr-core-GestationalAge-extension.json +218 -0
- data/lib/resources/standard_health_record/StructureDefinition-shr-core-GestationalTemporalContext-extension.json +421 -0
- data/lib/resources/standard_health_record/StructureDefinition-shr-core-GestationalTimePeriod-extension.json +218 -0
- data/lib/resources/standard_health_record/StructureDefinition-shr-core-HumanName.json +417 -0
- data/lib/resources/standard_health_record/StructureDefinition-shr-core-Identifier.json +412 -0
- data/lib/resources/standard_health_record/StructureDefinition-shr-core-Length-extension.json +226 -0
- data/lib/resources/standard_health_record/StructureDefinition-shr-core-Likelihood-extension.json +216 -0
- data/lib/resources/standard_health_record/StructureDefinition-shr-core-Location-extension.json +234 -0
- data/lib/resources/standard_health_record/StructureDefinition-shr-core-LowerBound-extension.json +218 -0
- data/lib/resources/standard_health_record/StructureDefinition-shr-core-LowerBound.json +336 -0
- data/lib/resources/standard_health_record/StructureDefinition-shr-core-OccurrenceTime-extension.json +224 -0
- data/lib/resources/standard_health_record/StructureDefinition-shr-core-Percentage-extension.json +216 -0
- data/lib/resources/standard_health_record/StructureDefinition-shr-core-PeriodOfUse.json +235 -0
- data/lib/resources/standard_health_record/StructureDefinition-shr-core-Priority-extension.json +216 -0
- data/lib/resources/standard_health_record/StructureDefinition-shr-core-QualitativeDateTime-extension.json +230 -0
- data/lib/resources/standard_health_record/StructureDefinition-shr-core-QualitativeLikelihood-extension.json +230 -0
- data/lib/resources/standard_health_record/StructureDefinition-shr-core-Quantity-extension.json +218 -0
- data/lib/resources/standard_health_record/StructureDefinition-shr-core-Quantity.json +331 -0
- data/lib/resources/standard_health_record/StructureDefinition-shr-core-Reason-extension.json +224 -0
- data/lib/resources/standard_health_record/StructureDefinition-shr-core-Setting-extension.json +230 -0
- data/lib/resources/standard_health_record/StructureDefinition-shr-core-State-extension.json +216 -0
- data/lib/resources/standard_health_record/StructureDefinition-shr-core-Statistic.json +390 -0
- data/lib/resources/standard_health_record/StructureDefinition-shr-core-StatisticType-extension.json +230 -0
- data/lib/resources/standard_health_record/StructureDefinition-shr-core-Substance-extension.json +218 -0
- data/lib/resources/standard_health_record/StructureDefinition-shr-core-TimePeriod-extension.json +218 -0
- data/lib/resources/standard_health_record/StructureDefinition-shr-core-TimePeriod.json +235 -0
- data/lib/resources/standard_health_record/StructureDefinition-shr-core-UnitedStatesAddress.json +606 -0
- data/lib/resources/standard_health_record/StructureDefinition-shr-core-UpperBound-extension.json +218 -0
- data/lib/resources/standard_health_record/StructureDefinition-shr-core-UpperBound.json +336 -0
- data/lib/resources/standard_health_record/StructureDefinition-shr-core-Volume-extension.json +226 -0
- data/lib/resources/standard_health_record/StructureDefinition-shr-core-Width-extension.json +226 -0
- data/lib/resources/standard_health_record/StructureDefinition-shr-demographics-CountryOfIssue-extension.json +367 -0
- data/lib/resources/standard_health_record/StructureDefinition-shr-demographics-DriversLicenseNumber-extension.json +447 -0
- data/lib/resources/standard_health_record/StructureDefinition-shr-demographics-FamilialRelationship-extension.json +513 -0
- data/lib/resources/standard_health_record/StructureDefinition-shr-demographics-FathersName-extension.json +218 -0
- data/lib/resources/standard_health_record/StructureDefinition-shr-demographics-HealthInsurance.json +1271 -0
- data/lib/resources/standard_health_record/StructureDefinition-shr-demographics-HomeTelephoneNumber.json +486 -0
- data/lib/resources/standard_health_record/StructureDefinition-shr-demographics-PassportNumber-extension.json +447 -0
- data/lib/resources/standard_health_record/StructureDefinition-shr-demographics-PersonOfRecord-extension.json +218 -0
- data/lib/resources/standard_health_record/StructureDefinition-shr-demographics-PersonOfRecord.json +2554 -0
- data/lib/resources/standard_health_record/StructureDefinition-shr-demographics-SocialSecurityNumber-extension.json +216 -0
- data/lib/resources/standard_health_record/StructureDefinition-shr-demographics-StateOfIssue-extension.json +367 -0
- data/lib/resources/standard_health_record/StructureDefinition-shr-demographics-Telecom.json +434 -0
- data/lib/resources/standard_health_record/StructureDefinition-shr-demographics-TelecomTypeOther-extension.json +216 -0
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- data/lib/resources/standard_health_record/ValueSet-shr-environment-ResourceStabilityVS.json +61 -0
- data/lib/resources/standard_health_record/ValueSet-shr-immunization-ImmunizationNotGivenReasonVS.json +62 -0
- data/lib/resources/standard_health_record/ValueSet-shr-lab-ChangeFlagVS.json +65 -0
- data/lib/resources/standard_health_record/ValueSet-shr-lab-HIVScreeningTestCodeVS.json +36 -0
- data/lib/resources/standard_health_record/ValueSet-shr-lab-HIVScreeningTestResultVS.json +61 -0
- data/lib/resources/standard_health_record/ValueSet-shr-lab-HIVSupplementalTestCodeVS.json +36 -0
- data/lib/resources/standard_health_record/ValueSet-shr-lab-HIVSupplementalTestResultVS.json +89 -0
- data/lib/resources/standard_health_record/ValueSet-shr-lab-RequestStatusVS.json +61 -0
- data/lib/resources/standard_health_record/ValueSet-shr-lab-TestInterpretationVS.json +73 -0
- data/lib/resources/standard_health_record/ValueSet-shr-lifehistory-CongenitalAbnormalitiesVS.json +50 -0
- data/lib/resources/standard_health_record/ValueSet-shr-lifehistory-EducationalAttainmentVS.json +85 -0
- data/lib/resources/standard_health_record/ValueSet-shr-lifehistory-EmploymentStatusVS.json +97 -0
- data/lib/resources/standard_health_record/ValueSet-shr-lifehistory-MilitaryServiceDischargeStatusVS.json +65 -0
- data/lib/resources/standard_health_record/ValueSet-shr-lifehistory-MilitaryServiceEraVS.json +78 -0
- data/lib/resources/standard_health_record/ValueSet-shr-lifehistory-MilitaryStatusVS.json +57 -0
- data/lib/resources/standard_health_record/ValueSet-shr-lifehistory-TeratogenVS.json +269 -0
- data/lib/resources/standard_health_record/ValueSet-shr-lifehistory-USMilitaryBranchVS.json +73 -0
- data/lib/resources/standard_health_record/ValueSet-shr-medication-MedicationChangeReasonVS.json +69 -0
- data/lib/resources/standard_health_record/ValueSet-shr-medication-MedicationChangeTypeVS.json +65 -0
- data/lib/resources/standard_health_record/ValueSet-shr-medication-MedicationNonAdherenceReasonVS.json +89 -0
- data/lib/resources/standard_health_record/ValueSet-shr-medication-MedicationVS.json +43 -0
- data/lib/resources/standard_health_record/ValueSet-shr-medication-ReasonMedicationNotUsedVS.json +85 -0
- data/lib/resources/standard_health_record/ValueSet-shr-observation-ExposureReasonVS.json +74 -0
- data/lib/resources/standard_health_record/ValueSet-shr-observation-NonLabObservationStatusVS.json +58 -0
- data/lib/resources/standard_health_record/ValueSet-shr-observation-ObservationNotMadeReasonVS.json +66 -0
- data/lib/resources/standard_health_record/ValueSet-shr-problem-DSMVS.json +43 -0
- data/lib/resources/standard_health_record/ValueSet-shr-problem-EvidenceQualityVS.json +57 -0
- data/lib/resources/standard_health_record/ValueSet-shr-problem-GradeOrStageVS.json +65 -0
- data/lib/resources/standard_health_record/ValueSet-shr-problem-ProblemCategoryVS.json +69 -0
- data/lib/resources/standard_health_record/ValueSet-shr-sex-CommonPregnancyComplicationVS.json +101 -0
- data/lib/resources/standard_health_record/ValueSet-shr-sex-ContraceptiveMethodReasonVS.json +65 -0
- data/lib/resources/standard_health_record/ValueSet-shr-sex-ContraceptiveMethodVS.json +117 -0
- data/lib/resources/standard_health_record/ValueSet-shr-sex-ContraceptiveNotUsedReasonVS.json +85 -0
- data/lib/resources/standard_health_record/ValueSet-shr-sex-DifficultyWithIntercourseVS.json +93 -0
- data/lib/resources/standard_health_record/ValueSet-shr-sex-GenderIdentityVS.json +73 -0
- data/lib/resources/standard_health_record/ValueSet-shr-sex-SexualActivityVS.json +97 -0
- data/lib/resources/standard_health_record/ValueSet-shr-sex-SexualOrientationVS.json +50 -0
- data/lib/resources/standard_health_record/ValueSet-shr-skin-PressureUlcerAssociationVS.json +53 -0
- data/lib/resources/standard_health_record/ValueSet-shr-skin-PressureUlcerBodySiteVS.json +109 -0
- data/lib/resources/standard_health_record/ValueSet-shr-skin-SupportSurfaceBodyPositionVS.json +53 -0
- data/lib/resources/standard_health_record/ValueSet-shr-skin-SupportSurfaceCategoryVS.json +73 -0
- data/lib/resources/standard_health_record/ValueSet-shr-skin-SupportSurfaceComponentVS.json +93 -0
- data/lib/resources/standard_health_record/ValueSet-shr-skin-SupportSurfaceFeatureVS.json +73 -0
- data/lib/resources/standard_health_record/ValueSet-shr-skin-SupportSurfaceVS.json +50 -0
- data/lib/resources/standard_health_record/ValueSet-shr-skin-VisibleInternalStructureVS.json +77 -0
- data/lib/resources/standard_health_record/ValueSet-shr-skin-WoundEdgeAppearanceVS.json +65 -0
- data/lib/resources/standard_health_record/ValueSet-shr-vital-BloodPressureBodySiteVS.json +53 -0
- data/lib/resources/standard_health_record/ValueSet-shr-vital-BloodPressureMethodVS.json +62 -0
- data/lib/resources/standard_health_record/ValueSet-shr-vital-BloodPressureQualifierVS.json +79 -0
- data/lib/resources/standard_health_record/ValueSet-shr-vital-BodyHeightQualifierVS.json +78 -0
- data/lib/resources/standard_health_record/ValueSet-shr-vital-BodyTemperatureBodySiteVS.json +89 -0
- data/lib/resources/standard_health_record/ValueSet-shr-vital-BodyTemperatureQualifierVS.json +49 -0
- data/lib/resources/standard_health_record/ValueSet-shr-vital-BodyWeightQualifierVS.json +101 -0
- data/lib/resources/standard_health_record/ValueSet-shr-vital-HeartRateMethodVS.json +74 -0
- data/lib/resources/standard_health_record/ValueSet-shr-vital-HeartRateQualifierVS.json +66 -0
- data/lib/resources/standard_health_record/ValueSet-shr-vital-OxygenSaturationBodySiteVS.json +65 -0
- data/lib/resources/standard_health_record/ValueSet-shr-vital-RespiratoryRateMethodVS.json +70 -0
- data/lib/resources/standard_health_record/ValueSet-shr-vital-RespiratoryRateQualifierVS.json +102 -0
- data/lib/resources/standard_health_record/spec.internals +3281 -0
- data/lib/resources/us_core/CapabilityStatement-client.json +996 -0
- data/lib/resources/us_core/CapabilityStatement-server.json +1825 -0
- data/lib/resources/us_core/CodeSystem-careplan-category.json +25 -0
- data/lib/resources/us_core/CodeSystem-cdcrec.json +4883 -0
- data/lib/resources/us_core/CodeSystem-condition-category.json +30 -0
- data/lib/resources/us_core/ConceptMap-ndc-cvx.json +2127 -0
- data/lib/resources/us_core/ImplementationGuide-ig.json +1617 -0
- data/lib/resources/us_core/StructureDefinition-us-core-allergyintolerance.json +1425 -0
- data/lib/resources/us_core/StructureDefinition-us-core-birthsex.json +257 -0
- data/lib/resources/us_core/StructureDefinition-us-core-careplan.json +2366 -0
- data/lib/resources/us_core/StructureDefinition-us-core-careteam.json +1091 -0
- data/lib/resources/us_core/StructureDefinition-us-core-condition.json +1605 -0
- data/lib/resources/us_core/StructureDefinition-us-core-device.json +1375 -0
- data/lib/resources/us_core/StructureDefinition-us-core-diagnosticreport.json +1746 -0
- data/lib/resources/us_core/StructureDefinition-us-core-direct.json +244 -0
- data/lib/resources/us_core/StructureDefinition-us-core-ethnicity.json +882 -0
- data/lib/resources/us_core/StructureDefinition-us-core-goal.json +1179 -0
- data/lib/resources/us_core/StructureDefinition-us-core-immunization.json +2286 -0
- data/lib/resources/us_core/StructureDefinition-us-core-location.json +1694 -0
- data/lib/resources/us_core/StructureDefinition-us-core-medication.json +1421 -0
- data/lib/resources/us_core/StructureDefinition-us-core-medicationrequest.json +2062 -0
- data/lib/resources/us_core/StructureDefinition-us-core-medicationstatement.json +1248 -0
- data/lib/resources/us_core/StructureDefinition-us-core-observationresults.json +2488 -0
- data/lib/resources/us_core/StructureDefinition-us-core-organization.json +2011 -0
- data/lib/resources/us_core/StructureDefinition-us-core-patient.json +3045 -0
- data/lib/resources/us_core/StructureDefinition-us-core-practitioner.json +1679 -0
- data/lib/resources/us_core/StructureDefinition-us-core-procedure.json +1797 -0
- data/lib/resources/us_core/StructureDefinition-us-core-profile-link.json +259 -0
- data/lib/resources/us_core/StructureDefinition-us-core-race.json +882 -0
- data/lib/resources/us_core/StructureDefinition-us-core-smokingstatus.json +2342 -0
- data/lib/resources/us_core/StructureDefinition-us-core-vitalsigns.json +3125 -0
- data/lib/resources/us_core/ValueSet-detailed-ethnicity.json +42 -0
- data/lib/resources/us_core/ValueSet-detailed-race.json +51 -0
- data/lib/resources/us_core/ValueSet-omb-ethnicity-category.json +32 -0
- data/lib/resources/us_core/ValueSet-omb-race-category.json +81 -0
- data/lib/resources/us_core/ValueSet-simple-language.json +59 -0
- data/lib/resources/us_core/ValueSet-us-core-birthsex.json +51 -0
- data/lib/resources/us_core/ValueSet-us-core-careteam-provider-roles.json +54 -0
- data/lib/resources/us_core/ValueSet-us-core-condition-category.json +36 -0
- data/lib/resources/us_core/ValueSet-us-core-cvx.json +38 -0
- data/lib/resources/us_core/ValueSet-us-core-medication-codes.json +51 -0
- data/lib/resources/us_core/ValueSet-us-core-narrative-status.json +43 -0
- data/lib/resources/us_core/ValueSet-us-core-ndc-vaccine-codes.json +2052 -0
- data/lib/resources/us_core/ValueSet-us-core-observation-ccdasmokingstatus.json +79 -0
- data/lib/resources/us_core/ValueSet-us-core-observation-value-codes.json +38 -0
- data/lib/resources/us_core/ValueSet-us-core-problem.json +70 -0
- data/lib/resources/us_core/ValueSet-us-core-procedure-code.json +55 -0
- data/lib/resources/us_core/ValueSet-us-core-procedure-icd10pcs.json +39 -0
- data/lib/resources/us_core/ValueSet-us-core-provider-role.json +33 -0
- data/lib/resources/us_core/ValueSet-us-core-provider-specialty.json +33 -0
- data/lib/resources/us_core/ValueSet-us-core-substance-ndfrt.json +68 -0
- data/lib/resources/us_core/ValueSet-us-core-substance-rxnorm.json +60 -0
- data/lib/resources/us_core/ValueSet-us-core-substance-sct.json +108 -0
- data/lib/resources/us_core/ValueSet-us-core-substance.json +51 -0
- data/lib/resources/us_core/spec.internals +698 -0
- data/lib/rubrics.rb +10 -1
- data/lib/rubrics/standard_health_record.rb +39 -0
- data/lib/rubrics/us_core.rb +39 -0
- data/lib/scorecard.rb +8 -0
- data/lib/tasks/tasks.rake +98 -9
- metadata +610 -6
data/lib/rubrics.rb
CHANGED
@@ -1,12 +1,13 @@
|
|
1
1
|
module FHIR
|
2
2
|
class Rubrics
|
3
3
|
|
4
|
+
@@disabled = [:us_core, :standard_health_record]
|
4
5
|
@@rubrics = {}
|
5
6
|
|
6
7
|
def self.apply(record)
|
7
8
|
report = {}
|
8
9
|
@@rubrics.each do |key,rubric|
|
9
|
-
report[key] = rubric.call(record)
|
10
|
+
report[key] = rubric.call(record) unless @@disabled.include?(key)
|
10
11
|
end
|
11
12
|
report
|
12
13
|
end
|
@@ -19,5 +20,13 @@ module FHIR
|
|
19
20
|
{:points=>points,:message=>message}
|
20
21
|
end
|
21
22
|
|
23
|
+
def self.enable(rubric)
|
24
|
+
@@disabled.delete(rubric)
|
25
|
+
end
|
26
|
+
|
27
|
+
def self.disable(rubric)
|
28
|
+
@@disabled << rubric unless @@disabled.include?(rubric)
|
29
|
+
end
|
30
|
+
|
22
31
|
end
|
23
32
|
end
|
@@ -0,0 +1,39 @@
|
|
1
|
+
module FHIR
|
2
|
+
class StandardHealthRecordRubric < FHIR::Rubrics
|
3
|
+
|
4
|
+
# Resources should adhere to the Standard Health Record (SHR) Implementation Guide (IG)
|
5
|
+
rubric :standard_health_record do |record|
|
6
|
+
results = {
|
7
|
+
:eligible_resources => 0,
|
8
|
+
:validated_resources => 0
|
9
|
+
}
|
10
|
+
|
11
|
+
resources = record.entry.map{|e|e.resource}
|
12
|
+
resources.each_with_index do |resource, index|
|
13
|
+
profile = FHIR::ImplementationGuideLookup.guess_shr_profile(resource)
|
14
|
+
if profile
|
15
|
+
results[:eligible_resources] += 1
|
16
|
+
errors = profile.validate_resource(resource)
|
17
|
+
if errors.empty?
|
18
|
+
results[:validated_resources] += 1
|
19
|
+
else
|
20
|
+
puts "------------------------------"
|
21
|
+
puts "#{index+1} of #{resources.size}"
|
22
|
+
puts "Profile: #{profile.id}"
|
23
|
+
puts "ERRORS"
|
24
|
+
puts errors
|
25
|
+
puts "WARNINGS"
|
26
|
+
puts profile.warnings
|
27
|
+
end
|
28
|
+
end
|
29
|
+
end
|
30
|
+
|
31
|
+
percentage = results[:validated_resources].to_f / results[:eligible_resources].to_f
|
32
|
+
percentage = 0.0 if percentage.nan?
|
33
|
+
points = 10.0 * percentage
|
34
|
+
message = "#{(100 * percentage).to_i}% (#{results[:validated_resources]}/#{results[:eligible_resources]}) of eligible resources conform to the Standard Health Record (SHR) Implementation Guide."
|
35
|
+
response(points.to_i,message)
|
36
|
+
end
|
37
|
+
|
38
|
+
end
|
39
|
+
end
|
@@ -0,0 +1,39 @@
|
|
1
|
+
module FHIR
|
2
|
+
class USCoreRubric < FHIR::Rubrics
|
3
|
+
|
4
|
+
# Resources should adhere to the US Core Implementation Guide (IG)
|
5
|
+
rubric :us_core do |record|
|
6
|
+
results = {
|
7
|
+
:eligible_resources => 0,
|
8
|
+
:validated_resources => 0
|
9
|
+
}
|
10
|
+
|
11
|
+
resources = record.entry.map{|e|e.resource}
|
12
|
+
resources.each_with_index do |resource, index|
|
13
|
+
profile = FHIR::ImplementationGuideLookup.guess_uscore_profile(resource)
|
14
|
+
if profile
|
15
|
+
results[:eligible_resources] += 1
|
16
|
+
errors = profile.validate_resource(resource)
|
17
|
+
if errors.empty?
|
18
|
+
results[:validated_resources] += 1
|
19
|
+
else
|
20
|
+
puts "------------------------------"
|
21
|
+
puts "#{index+1} of #{resources.size}"
|
22
|
+
puts "Profile: #{profile.id}"
|
23
|
+
puts "ERRORS"
|
24
|
+
puts errors
|
25
|
+
puts "WARNINGS"
|
26
|
+
puts profile.warnings
|
27
|
+
end
|
28
|
+
end
|
29
|
+
end
|
30
|
+
|
31
|
+
percentage = results[:validated_resources].to_f / results[:eligible_resources].to_f
|
32
|
+
percentage = 0.0 if percentage.nan?
|
33
|
+
points = 10.0 * percentage
|
34
|
+
message = "#{(100 * percentage).to_i}% (#{results[:validated_resources]}/#{results[:eligible_resources]}) of eligible resources conform to the US Core Implementation Guide."
|
35
|
+
response(points.to_i,message)
|
36
|
+
end
|
37
|
+
|
38
|
+
end
|
39
|
+
end
|
data/lib/scorecard.rb
CHANGED
data/lib/tasks/tasks.rake
CHANGED
@@ -12,17 +12,20 @@ namespace :fhir do
|
|
12
12
|
puts 'A path to FHIR Bundle is required!'
|
13
13
|
else
|
14
14
|
contents = File.open(bundle_path,'r:UTF-8',&:read)
|
15
|
+
FHIR.logger.level = Logger::INFO
|
15
16
|
scorecard = FHIR::Scorecard.new
|
17
|
+
scorecard.enable_us_core
|
18
|
+
scorecard.enable_shr
|
16
19
|
report = scorecard.score(contents)
|
17
20
|
puts
|
18
21
|
puts " POINTS CATEGORY MESSAGE"
|
19
22
|
puts " ------ -------- -------"
|
20
23
|
report.each do |key,value|
|
21
24
|
next if key==:points
|
22
|
-
printf(" %3d %
|
25
|
+
printf(" %3d %22s %s\n", value[:points], key, value[:message])
|
23
26
|
end
|
24
27
|
puts " ------"
|
25
|
-
printf(" %3d %
|
28
|
+
printf(" %3d %22s\n", report[:points], 'TOTAL')
|
26
29
|
puts
|
27
30
|
end
|
28
31
|
end
|
@@ -159,10 +162,14 @@ namespace :fhir do
|
|
159
162
|
include_code = (row[12]=='PT')
|
160
163
|
when 'ICD10PCS'
|
161
164
|
codeSystem = 'ICD10'
|
162
|
-
include_code = (row[12]=='PT')
|
165
|
+
include_code = (row[12]=='PT')
|
163
166
|
when 'ICD9CM'
|
164
167
|
codeSystem = 'ICD9'
|
165
168
|
include_code = (row[12]=='PT')
|
169
|
+
when 'CPT'
|
170
|
+
include_code = (row[12]=='PT')
|
171
|
+
when 'HCPCS'
|
172
|
+
include_code = (row[12]=='PT')
|
166
173
|
when 'MTHICD9'
|
167
174
|
codeSystem = 'ICD9'
|
168
175
|
include_code = true
|
@@ -196,12 +203,94 @@ namespace :fhir do
|
|
196
203
|
puts "Completed in #{minutes.floor} minute(s) #{seconds.floor} second(s)."
|
197
204
|
puts 'Done.'
|
198
205
|
else
|
199
|
-
|
200
|
-
|
201
|
-
|
202
|
-
|
203
|
-
|
204
|
-
|
206
|
+
download_umls_notice
|
207
|
+
end
|
208
|
+
end
|
209
|
+
|
210
|
+
def download_umls_notice
|
211
|
+
puts 'UMLS file not found.'
|
212
|
+
puts 'Download the US National Library of Medicine (NLM) Unified Medical Language System (UMLS) Full Release files'
|
213
|
+
puts ' -> https://www.nlm.nih.gov/research/umls/licensedcontent/umlsknowledgesources.html'
|
214
|
+
puts 'Install the metathesaurus with the following data sources:'
|
215
|
+
puts ' CVX|CVX;ICD10CM|ICD10CM;ICD10PCS|ICD10PCS;ICD9CM|ICD9CM;LNC|LNC;MTHICD9|ICD9CM;RXNORM|RXNORM;SNOMEDCT_US|SNOMEDCT;CPT;HCPCS'
|
216
|
+
puts 'After installation, copy `{install path}/META/MRCONSO.RRF` into your `./terminology` folder, and rerun this task.'
|
217
|
+
end
|
218
|
+
|
219
|
+
desc 'post-process UMLS terminology file for translations'
|
220
|
+
task :process_umls_translations, [] do |t, args|
|
221
|
+
require 'find'
|
222
|
+
puts 'Looking for `./terminology/MRCONSO.RRF`...'
|
223
|
+
input_file = Find.find('terminology').find{|f| f=='terminology/MRCONSO.RRF' }
|
224
|
+
if input_file
|
225
|
+
start = Time.now
|
226
|
+
output_filename = 'terminology/translations_umls.txt'
|
227
|
+
output = File.open(output_filename,'w:UTF-8')
|
228
|
+
line = 0
|
229
|
+
excluded = 0
|
230
|
+
excluded_systems = Hash.new(0)
|
231
|
+
begin
|
232
|
+
entire_file = File.read(input_file)
|
233
|
+
puts "Writing to #{output_filename}..."
|
234
|
+
current_umls_concept = nil
|
235
|
+
translation = Array.new(10)
|
236
|
+
entire_file.split("\n").each do |l|
|
237
|
+
row = l.split('|')
|
238
|
+
line += 1
|
239
|
+
include_code = false
|
240
|
+
concept = row[0]
|
241
|
+
if concept != current_umls_concept && !current_umls_concept.nil?
|
242
|
+
output.write("#{translation.join('|')}\n") unless translation[1..-2].reject(&:nil?).length < 2
|
243
|
+
translation = Array.new(10)
|
244
|
+
current_umls_concept = concept
|
245
|
+
translation[0] = current_umls_concept
|
246
|
+
elsif current_umls_concept.nil?
|
247
|
+
current_umls_concept = concept
|
248
|
+
translation[0] = current_umls_concept
|
249
|
+
end
|
250
|
+
codeSystem = row[11]
|
251
|
+
code = row[13]
|
252
|
+
translation[9] = row[14]
|
253
|
+
case codeSystem
|
254
|
+
when 'SNOMEDCT_US'
|
255
|
+
translation[1] = code if (row[4]=='PF' && ['FN','OAF'].include?(row[12]))
|
256
|
+
when 'LNC'
|
257
|
+
translation[2] = code
|
258
|
+
when 'ICD10CM'
|
259
|
+
translation[3] = code if (row[12]=='PT')
|
260
|
+
when 'ICD10PCS'
|
261
|
+
translation[3] = code if (row[12]=='PT')
|
262
|
+
when 'ICD9CM'
|
263
|
+
translation[4] = code if (row[12]=='PT')
|
264
|
+
when 'MTHICD9'
|
265
|
+
translation[4] = code
|
266
|
+
when 'RXNORM'
|
267
|
+
translation[5] = code
|
268
|
+
when 'CVX'
|
269
|
+
translation[6] = code if (['PT','OP'].include?(row[12]))
|
270
|
+
when 'CPT'
|
271
|
+
translation[7] = code if (row[12]=='PT')
|
272
|
+
when 'HCPCS'
|
273
|
+
translation[8] = code if (row[12]=='PT')
|
274
|
+
when 'SRC'
|
275
|
+
# 'SRC' rows define the data sources in the file
|
276
|
+
else
|
277
|
+
excluded_systems[codeSystem] += 1
|
278
|
+
end
|
279
|
+
end
|
280
|
+
rescue Exception => e
|
281
|
+
puts "Error at line #{line}"
|
282
|
+
puts e.message
|
283
|
+
end
|
284
|
+
output.close
|
285
|
+
puts "Processed #{line} lines."
|
286
|
+
puts "Excluded code systems: #{excluded_systems}" if !excluded_systems.empty?
|
287
|
+
finish = Time.now
|
288
|
+
minutes = ((finish-start)/60)
|
289
|
+
seconds = (minutes - minutes.floor) * 60
|
290
|
+
puts "Completed in #{minutes.floor} minute(s) #{seconds.floor} second(s)."
|
291
|
+
puts 'Done.'
|
292
|
+
else
|
293
|
+
download_umls_notice
|
205
294
|
end
|
206
295
|
end
|
207
296
|
end
|
metadata
CHANGED
@@ -1,29 +1,29 @@
|
|
1
1
|
--- !ruby/object:Gem::Specification
|
2
2
|
name: fhir_scorecard
|
3
3
|
version: !ruby/object:Gem::Version
|
4
|
-
version:
|
4
|
+
version: 3.0.1
|
5
5
|
platform: ruby
|
6
6
|
authors:
|
7
7
|
- Jason Walonoski
|
8
8
|
autorequire:
|
9
9
|
bindir: bin
|
10
10
|
cert_chain: []
|
11
|
-
date:
|
11
|
+
date: 2017-05-02 00:00:00.000000000 Z
|
12
12
|
dependencies:
|
13
13
|
- !ruby/object:Gem::Dependency
|
14
14
|
name: fhir_models
|
15
15
|
requirement: !ruby/object:Gem::Requirement
|
16
16
|
requirements:
|
17
|
-
- - "
|
17
|
+
- - ">="
|
18
18
|
- !ruby/object:Gem::Version
|
19
|
-
version:
|
19
|
+
version: 3.0.0
|
20
20
|
type: :runtime
|
21
21
|
prerelease: false
|
22
22
|
version_requirements: !ruby/object:Gem::Requirement
|
23
23
|
requirements:
|
24
|
-
- - "
|
24
|
+
- - ">="
|
25
25
|
- !ruby/object:Gem::Version
|
26
|
-
version:
|
26
|
+
version: 3.0.0
|
27
27
|
description: A Gem for scoring FHIR Patient Records (as Bundles)
|
28
28
|
email: jwalonoski@mitre.org
|
29
29
|
executables: []
|
@@ -40,6 +40,608 @@ files:
|
|
40
40
|
- Rakefile
|
41
41
|
- fhir_scorecard.gemspec
|
42
42
|
- lib/fhir_scorecard.rb
|
43
|
+
- lib/implementation_guides.rb
|
44
|
+
- lib/resources/profile_indicators.json
|
45
|
+
- lib/resources/standard_health_record/CodeSystem-shr-actor-LanguageQualifierCS.json
|
46
|
+
- lib/resources/standard_health_record/CodeSystem-shr-base-GenericAnswersCS.json
|
47
|
+
- lib/resources/standard_health_record/CodeSystem-shr-base-MissingValueReasonCS.json
|
48
|
+
- lib/resources/standard_health_record/CodeSystem-shr-behavior-AlcoholUseScreeningToolCS.json
|
49
|
+
- lib/resources/standard_health_record/CodeSystem-shr-behavior-DietNutritionConcernCS.json
|
50
|
+
- lib/resources/standard_health_record/CodeSystem-shr-behavior-PhysicalActivityLimitationCS.json
|
51
|
+
- lib/resources/standard_health_record/CodeSystem-shr-behavior-ReligiousPracticeStatusCS.json
|
52
|
+
- lib/resources/standard_health_record/CodeSystem-shr-behavior-ReligiousRestrictionCS.json
|
53
|
+
- lib/resources/standard_health_record/CodeSystem-shr-behavior-SleepQualityReasonCS.json
|
54
|
+
- lib/resources/standard_health_record/CodeSystem-shr-behavior-SpecialDietFollowedCS.json
|
55
|
+
- lib/resources/standard_health_record/CodeSystem-shr-behavior-SubstanceAbuseTreatmentTypeCS.json
|
56
|
+
- lib/resources/standard_health_record/CodeSystem-shr-core-CodingQualifierCS.json
|
57
|
+
- lib/resources/standard_health_record/CodeSystem-shr-core-PerformanceGradingScaleCS.json
|
58
|
+
- lib/resources/standard_health_record/CodeSystem-shr-core-QualitativeDateTimeCS.json
|
59
|
+
- lib/resources/standard_health_record/CodeSystem-shr-core-QualitativeFrequencyCS.json
|
60
|
+
- lib/resources/standard_health_record/CodeSystem-shr-core-QualitativeLikelihoodCS.json
|
61
|
+
- lib/resources/standard_health_record/CodeSystem-shr-core-QualitativeValueScaleCS.json
|
62
|
+
- lib/resources/standard_health_record/CodeSystem-shr-core-SemiquantitativeDurationCS.json
|
63
|
+
- lib/resources/standard_health_record/CodeSystem-shr-core-SemiquantitativeFrequencyCS.json
|
64
|
+
- lib/resources/standard_health_record/CodeSystem-shr-core-SettingCS.json
|
65
|
+
- lib/resources/standard_health_record/CodeSystem-shr-core-ThreePriorityCS.json
|
66
|
+
- lib/resources/standard_health_record/CodeSystem-shr-core-ThreeValueLogicCS.json
|
67
|
+
- lib/resources/standard_health_record/CodeSystem-shr-demographics-AddressUseCS.json
|
68
|
+
- lib/resources/standard_health_record/CodeSystem-shr-demographics-InsuranceProviderTypeCS.json
|
69
|
+
- lib/resources/standard_health_record/CodeSystem-shr-demographics-TelecomQualifierCS.json
|
70
|
+
- lib/resources/standard_health_record/CodeSystem-shr-demographics-TelephoneTypeCS.json
|
71
|
+
- lib/resources/standard_health_record/CodeSystem-shr-device-RespiratoryAssistDeviceCS.json
|
72
|
+
- lib/resources/standard_health_record/CodeSystem-shr-device-RespiratoryRateSettingCS.json
|
73
|
+
- lib/resources/standard_health_record/CodeSystem-shr-encounter-EncounterTypeCS.json
|
74
|
+
- lib/resources/standard_health_record/CodeSystem-shr-encounter-EpisodeOfCareCompletionCS.json
|
75
|
+
- lib/resources/standard_health_record/CodeSystem-shr-encounter-ReasonEncounterDidNotHappenCS.json
|
76
|
+
- lib/resources/standard_health_record/CodeSystem-shr-encounter-ReferralSourceTypeCS.json
|
77
|
+
- lib/resources/standard_health_record/CodeSystem-shr-encounter-TreatmentCooperationCS.json
|
78
|
+
- lib/resources/standard_health_record/CodeSystem-shr-environment-AnimalExposureCS.json
|
79
|
+
- lib/resources/standard_health_record/CodeSystem-shr-environment-CoinhabitantCS.json
|
80
|
+
- lib/resources/standard_health_record/CodeSystem-shr-environment-HomeEnvironmentRiskCS.json
|
81
|
+
- lib/resources/standard_health_record/CodeSystem-shr-environment-IncomeSourceCS.json
|
82
|
+
- lib/resources/standard_health_record/CodeSystem-shr-environment-NonCashBenefitCS.json
|
83
|
+
- lib/resources/standard_health_record/CodeSystem-shr-environment-ResourceStabilityCS.json
|
84
|
+
- lib/resources/standard_health_record/CodeSystem-shr-lab-RequestStatusCS.json
|
85
|
+
- lib/resources/standard_health_record/CodeSystem-shr-lifehistory-EducationalAttainmentCS.json
|
86
|
+
- lib/resources/standard_health_record/CodeSystem-shr-lifehistory-EmploymentStatusCS.json
|
87
|
+
- lib/resources/standard_health_record/CodeSystem-shr-lifehistory-MilitaryServiceDischargeStatusCS.json
|
88
|
+
- lib/resources/standard_health_record/CodeSystem-shr-lifehistory-MilitaryServiceEraCS.json
|
89
|
+
- lib/resources/standard_health_record/CodeSystem-shr-lifehistory-MilitaryStatusCS.json
|
90
|
+
- lib/resources/standard_health_record/CodeSystem-shr-lifehistory-TeratogenCS.json
|
91
|
+
- lib/resources/standard_health_record/CodeSystem-shr-lifehistory-USMilitaryBranchCS.json
|
92
|
+
- lib/resources/standard_health_record/CodeSystem-shr-medication-MedicationChangeReasonCS.json
|
93
|
+
- lib/resources/standard_health_record/CodeSystem-shr-medication-MedicationChangeTypeCS.json
|
94
|
+
- lib/resources/standard_health_record/CodeSystem-shr-medication-ReasonMedicationNotUsedCS.json
|
95
|
+
- lib/resources/standard_health_record/CodeSystem-shr-observation-ExposureReasonCS.json
|
96
|
+
- lib/resources/standard_health_record/CodeSystem-shr-observation-ObservationNotMadeReasonCS.json
|
97
|
+
- lib/resources/standard_health_record/CodeSystem-shr-problem-EvidenceQualityCS.json
|
98
|
+
- lib/resources/standard_health_record/CodeSystem-shr-problem-GradeOrStageCS.json
|
99
|
+
- lib/resources/standard_health_record/CodeSystem-shr-problem-ProblemCategoryCS.json
|
100
|
+
- lib/resources/standard_health_record/CodeSystem-shr-sex-ContraceptiveMethodCS.json
|
101
|
+
- lib/resources/standard_health_record/CodeSystem-shr-sex-ContraceptiveMethodReasonCS.json
|
102
|
+
- lib/resources/standard_health_record/CodeSystem-shr-sex-ContraceptiveNotUsedReasonCS.json
|
103
|
+
- lib/resources/standard_health_record/CodeSystem-shr-sex-GenderIdentityCS.json
|
104
|
+
- lib/resources/standard_health_record/CodeSystem-shr-skin-PressureUlcerAssociationCS.json
|
105
|
+
- lib/resources/standard_health_record/CodeSystem-shr-skin-SupportSurfaceBodyPositionCS.json
|
106
|
+
- lib/resources/standard_health_record/CodeSystem-shr-skin-SupportSurfaceCategoryCS.json
|
107
|
+
- lib/resources/standard_health_record/CodeSystem-shr-skin-SupportSurfaceComponentCS.json
|
108
|
+
- lib/resources/standard_health_record/CodeSystem-shr-skin-SupportSurfaceFeatureCS.json
|
109
|
+
- lib/resources/standard_health_record/CodeSystem-shr-vital-BloodPressureMethodCS.json
|
110
|
+
- lib/resources/standard_health_record/CodeSystem-shr-vital-BloodPressureQualifierCS.json
|
111
|
+
- lib/resources/standard_health_record/CodeSystem-shr-vital-BodyHeightQualifierCS.json
|
112
|
+
- lib/resources/standard_health_record/CodeSystem-shr-vital-BodyTemperatureQualifierCS.json
|
113
|
+
- lib/resources/standard_health_record/CodeSystem-shr-vital-BodyWeightQualifierCS.json
|
114
|
+
- lib/resources/standard_health_record/CodeSystem-shr-vital-HeartRateMethodCS.json
|
115
|
+
- lib/resources/standard_health_record/CodeSystem-shr-vital-HeartRateQualifierCS.json
|
116
|
+
- lib/resources/standard_health_record/CodeSystem-shr-vital-RespiratoryRateMethodCS.json
|
117
|
+
- lib/resources/standard_health_record/CodeSystem-shr-vital-RespiratoryRateQualifierCS.json
|
118
|
+
- lib/resources/standard_health_record/ImplementationGuide-1.json
|
119
|
+
- lib/resources/standard_health_record/StructureDefinition-primitive-base64Binary-extension.json
|
120
|
+
- lib/resources/standard_health_record/StructureDefinition-primitive-boolean-extension.json
|
121
|
+
- lib/resources/standard_health_record/StructureDefinition-primitive-code-extension.json
|
122
|
+
- lib/resources/standard_health_record/StructureDefinition-primitive-date-extension.json
|
123
|
+
- lib/resources/standard_health_record/StructureDefinition-primitive-dateTime-extension.json
|
124
|
+
- lib/resources/standard_health_record/StructureDefinition-primitive-decimal-extension.json
|
125
|
+
- lib/resources/standard_health_record/StructureDefinition-primitive-id-extension.json
|
126
|
+
- lib/resources/standard_health_record/StructureDefinition-primitive-instant-extension.json
|
127
|
+
- lib/resources/standard_health_record/StructureDefinition-primitive-integer-extension.json
|
128
|
+
- lib/resources/standard_health_record/StructureDefinition-primitive-markdown-extension.json
|
129
|
+
- lib/resources/standard_health_record/StructureDefinition-primitive-oid-extension.json
|
130
|
+
- lib/resources/standard_health_record/StructureDefinition-primitive-positiveInt-extension.json
|
131
|
+
- lib/resources/standard_health_record/StructureDefinition-primitive-string-extension.json
|
132
|
+
- lib/resources/standard_health_record/StructureDefinition-primitive-time-extension.json
|
133
|
+
- lib/resources/standard_health_record/StructureDefinition-primitive-unsignedInt-extension.json
|
134
|
+
- lib/resources/standard_health_record/StructureDefinition-primitive-uri-extension.json
|
135
|
+
- lib/resources/standard_health_record/StructureDefinition-primitive-xhtml-extension.json
|
136
|
+
- lib/resources/standard_health_record/StructureDefinition-shr-actor-Affiliation-extension.json
|
137
|
+
- lib/resources/standard_health_record/StructureDefinition-shr-actor-AgeAtDeath-extension.json
|
138
|
+
- lib/resources/standard_health_record/StructureDefinition-shr-actor-Anonymized-extension.json
|
139
|
+
- lib/resources/standard_health_record/StructureDefinition-shr-actor-DateOfDeath-extension.json
|
140
|
+
- lib/resources/standard_health_record/StructureDefinition-shr-actor-Deceased-extension.json
|
141
|
+
- lib/resources/standard_health_record/StructureDefinition-shr-actor-EmergencyContact.json
|
142
|
+
- lib/resources/standard_health_record/StructureDefinition-shr-actor-FictionalPerson-extension.json
|
143
|
+
- lib/resources/standard_health_record/StructureDefinition-shr-actor-LanguageQualifier-extension.json
|
144
|
+
- lib/resources/standard_health_record/StructureDefinition-shr-actor-LanguageUsed-extension.json
|
145
|
+
- lib/resources/standard_health_record/StructureDefinition-shr-actor-MedicalSpecialty-extension.json
|
146
|
+
- lib/resources/standard_health_record/StructureDefinition-shr-actor-NoPrimaryCareProvider.json
|
147
|
+
- lib/resources/standard_health_record/StructureDefinition-shr-actor-Organization.json
|
148
|
+
- lib/resources/standard_health_record/StructureDefinition-shr-actor-Participant-extension.json
|
149
|
+
- lib/resources/standard_health_record/StructureDefinition-shr-actor-ParticipationType-extension.json
|
150
|
+
- lib/resources/standard_health_record/StructureDefinition-shr-actor-Practitioner-extension.json
|
151
|
+
- lib/resources/standard_health_record/StructureDefinition-shr-actor-Practitioner.json
|
152
|
+
- lib/resources/standard_health_record/StructureDefinition-shr-actor-PrimaryCareProvider.json
|
153
|
+
- lib/resources/standard_health_record/StructureDefinition-shr-actor-ProviderRelationship.json
|
154
|
+
- lib/resources/standard_health_record/StructureDefinition-shr-actor-RelatedPerson-extension.json
|
155
|
+
- lib/resources/standard_health_record/StructureDefinition-shr-actor-RelatedPerson.json
|
156
|
+
- lib/resources/standard_health_record/StructureDefinition-shr-actor-SpokenLanguageProficiency-extension.json
|
157
|
+
- lib/resources/standard_health_record/StructureDefinition-shr-actor-WrittenLanguageProficiency-extension.json
|
158
|
+
- lib/resources/standard_health_record/StructureDefinition-shr-adverse-AdverseReaction-extension.json
|
159
|
+
- lib/resources/standard_health_record/StructureDefinition-shr-adverse-AdverseReaction.json
|
160
|
+
- lib/resources/standard_health_record/StructureDefinition-shr-adverse-AdverseReactionAttribution-extension.json
|
161
|
+
- lib/resources/standard_health_record/StructureDefinition-shr-adverse-AttributionCertainty-extension.json
|
162
|
+
- lib/resources/standard_health_record/StructureDefinition-shr-allergy-AllergyIntolerance.json
|
163
|
+
- lib/resources/standard_health_record/StructureDefinition-shr-allergy-DrugAllergy.json
|
164
|
+
- lib/resources/standard_health_record/StructureDefinition-shr-allergy-FoodAllergy-extension.json
|
165
|
+
- lib/resources/standard_health_record/StructureDefinition-shr-allergy-FoodAllergy.json
|
166
|
+
- lib/resources/standard_health_record/StructureDefinition-shr-allergy-NoKnownAllergy.json
|
167
|
+
- lib/resources/standard_health_record/StructureDefinition-shr-allergy-NoKnownDrugAllergy.json
|
168
|
+
- lib/resources/standard_health_record/StructureDefinition-shr-allergy-NoKnownEnvironmentalAllergy.json
|
169
|
+
- lib/resources/standard_health_record/StructureDefinition-shr-allergy-NoKnownFoodAllergy.json
|
170
|
+
- lib/resources/standard_health_record/StructureDefinition-shr-base-ActionCode-extension.json
|
171
|
+
- lib/resources/standard_health_record/StructureDefinition-shr-base-AssociatedEncounter-extension.json
|
172
|
+
- lib/resources/standard_health_record/StructureDefinition-shr-base-Author-extension.json
|
173
|
+
- lib/resources/standard_health_record/StructureDefinition-shr-base-Entry.json
|
174
|
+
- lib/resources/standard_health_record/StructureDefinition-shr-base-FocalSubject-extension.json
|
175
|
+
- lib/resources/standard_health_record/StructureDefinition-shr-base-Informant-extension.json
|
176
|
+
- lib/resources/standard_health_record/StructureDefinition-shr-base-Language-extension.json
|
177
|
+
- lib/resources/standard_health_record/StructureDefinition-shr-base-Narrative.json
|
178
|
+
- lib/resources/standard_health_record/StructureDefinition-shr-base-NonOccurrenceModifier-extension.json
|
179
|
+
- lib/resources/standard_health_record/StructureDefinition-shr-base-OriginalCreationDate-extension.json
|
180
|
+
- lib/resources/standard_health_record/StructureDefinition-shr-base-PatientInstructions-extension.json
|
181
|
+
- lib/resources/standard_health_record/StructureDefinition-shr-base-PerformerInstructions-extension.json
|
182
|
+
- lib/resources/standard_health_record/StructureDefinition-shr-base-ShrId-extension.json
|
183
|
+
- lib/resources/standard_health_record/StructureDefinition-shr-base-SubjectIsThirdPartyModifier-extension.json
|
184
|
+
- lib/resources/standard_health_record/StructureDefinition-shr-behavior-AlcoholBingeFrequency-extension.json
|
185
|
+
- lib/resources/standard_health_record/StructureDefinition-shr-behavior-AlcoholUse.json
|
186
|
+
- lib/resources/standard_health_record/StructureDefinition-shr-behavior-AssessmentTool-extension.json
|
187
|
+
- lib/resources/standard_health_record/StructureDefinition-shr-behavior-BehavioralObservation.json
|
188
|
+
- lib/resources/standard_health_record/StructureDefinition-shr-behavior-DietAndNutrition.json
|
189
|
+
- lib/resources/standard_health_record/StructureDefinition-shr-behavior-DietNutritionConcern-extension.json
|
190
|
+
- lib/resources/standard_health_record/StructureDefinition-shr-behavior-ExerciseHoursPerWeek-extension.json
|
191
|
+
- lib/resources/standard_health_record/StructureDefinition-shr-behavior-HasSufficientFood-extension.json
|
192
|
+
- lib/resources/standard_health_record/StructureDefinition-shr-behavior-HoursSleepPerNight-extension.json
|
193
|
+
- lib/resources/standard_health_record/StructureDefinition-shr-behavior-IntravenousDrugUse.json
|
194
|
+
- lib/resources/standard_health_record/StructureDefinition-shr-behavior-NicotineUse.json
|
195
|
+
- lib/resources/standard_health_record/StructureDefinition-shr-behavior-ONCSmokingStatus.json
|
196
|
+
- lib/resources/standard_health_record/StructureDefinition-shr-behavior-PhysicalActivityLevel.json
|
197
|
+
- lib/resources/standard_health_record/StructureDefinition-shr-behavior-PhysicalActivityLimitation-extension.json
|
198
|
+
- lib/resources/standard_health_record/StructureDefinition-shr-behavior-ReadinessToChange-extension.json
|
199
|
+
- lib/resources/standard_health_record/StructureDefinition-shr-behavior-ReligiousPractice.json
|
200
|
+
- lib/resources/standard_health_record/StructureDefinition-shr-behavior-ReligiousPracticeStatus-extension.json
|
201
|
+
- lib/resources/standard_health_record/StructureDefinition-shr-behavior-ReligiousRestriction-extension.json
|
202
|
+
- lib/resources/standard_health_record/StructureDefinition-shr-behavior-SleepQuality.json
|
203
|
+
- lib/resources/standard_health_record/StructureDefinition-shr-behavior-SleepQualityReason-extension.json
|
204
|
+
- lib/resources/standard_health_record/StructureDefinition-shr-behavior-SpecialDietFollowed-extension.json
|
205
|
+
- lib/resources/standard_health_record/StructureDefinition-shr-behavior-SubstanceAbuseTreatment.json
|
206
|
+
- lib/resources/standard_health_record/StructureDefinition-shr-behavior-SubstanceUse.json
|
207
|
+
- lib/resources/standard_health_record/StructureDefinition-shr-behavior-TroubleFallingAsleep-extension.json
|
208
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- lib/resources/us_core/ValueSet-us-core-observation-ccdasmokingstatus.json
|
634
|
+
- lib/resources/us_core/ValueSet-us-core-observation-value-codes.json
|
635
|
+
- lib/resources/us_core/ValueSet-us-core-problem.json
|
636
|
+
- lib/resources/us_core/ValueSet-us-core-procedure-code.json
|
637
|
+
- lib/resources/us_core/ValueSet-us-core-procedure-icd10pcs.json
|
638
|
+
- lib/resources/us_core/ValueSet-us-core-provider-role.json
|
639
|
+
- lib/resources/us_core/ValueSet-us-core-provider-specialty.json
|
640
|
+
- lib/resources/us_core/ValueSet-us-core-substance-ndfrt.json
|
641
|
+
- lib/resources/us_core/ValueSet-us-core-substance-rxnorm.json
|
642
|
+
- lib/resources/us_core/ValueSet-us-core-substance-sct.json
|
643
|
+
- lib/resources/us_core/ValueSet-us-core-substance.json
|
644
|
+
- lib/resources/us_core/spec.internals
|
43
645
|
- lib/rubrics.rb
|
44
646
|
- lib/rubrics/codes_exist.rb
|
45
647
|
- lib/rubrics/codes_umls.rb
|
@@ -54,6 +656,8 @@ files:
|
|
54
656
|
- lib/rubrics/rxnorm_meds.rb
|
55
657
|
- lib/rubrics/smoking_status.rb
|
56
658
|
- lib/rubrics/snomed_conditions.rb
|
659
|
+
- lib/rubrics/standard_health_record.rb
|
660
|
+
- lib/rubrics/us_core.rb
|
57
661
|
- lib/rubrics/vital_signs.rb
|
58
662
|
- lib/scorecard.rb
|
59
663
|
- lib/tasks/tasks.rake
|