fhir_models 0.3.0 → 0.3.1

data/lib/fhir/types/Timing.rb

@@ -0,0 +1,69 @@
+module FHIR
+  class Timing < FHIR::Model
+    include FHIR::Hashable
+    include FHIR::Json
+    include FHIR::Xml
+
+    SEARCH_PARAMS = []
+    METADATA = {
+      'id' => {'type'=>'id', 'path'=>'Timing.id', 'min'=>0, 'max'=>1},
+      'extension' => {'type'=>'Extension', 'path'=>'Timing.extension', 'min'=>0, 'max'=>Float::INFINITY},
+      'event' => {'type'=>'dateTime', 'path'=>'Timing.event', 'min'=>0, 'max'=>Float::INFINITY},
+      'repeat' => {'type'=>'Timing::Repeat', 'path'=>'Timing.repeat', 'min'=>0, 'max'=>1},
+      'code' => {'valid_codes'=>{'http://hl7.org/fhir/timing-abbreviation'=>['QD', 'QOD', 'Q4H', 'Q6H'], 'http://hl7.org/fhir/v3/GTSAbbreviation'=>['BID', 'TID', 'QID', 'AM', 'PM']}, 'type'=>'CodeableConcept', 'path'=>'Timing.code', 'min'=>0, 'max'=>1, 'binding'=>{'strength'=>'preferred', 'uri'=>'http://hl7.org/fhir/ValueSet/timing-abbreviation'}}
+    }
+
+    class Repeat < FHIR::Model
+      include FHIR::Hashable
+      include FHIR::Json
+      include FHIR::Xml
+
+      MULTIPLE_TYPES = {
+        'bounds' => ['Quantity', 'Range', 'Period']
+      }
+      METADATA = {
+        'id' => {'type'=>'id', 'path'=>'Repeat.id', 'min'=>0, 'max'=>1},
+        'extension' => {'type'=>'Extension', 'path'=>'Repeat.extension', 'min'=>0, 'max'=>Float::INFINITY},
+        'boundsQuantity' => {'type'=>'Quantity', 'path'=>'Repeat.bounds[x]', 'min'=>0, 'max'=>1},
+        'boundsRange' => {'type'=>'Range', 'path'=>'Repeat.bounds[x]', 'min'=>0, 'max'=>1},
+        'boundsPeriod' => {'type'=>'Period', 'path'=>'Repeat.bounds[x]', 'min'=>0, 'max'=>1},
+        'count' => {'type'=>'integer', 'path'=>'Repeat.count', 'min'=>0, 'max'=>1},
+        'countMax' => {'type'=>'integer', 'path'=>'Repeat.countMax', 'min'=>0, 'max'=>1},
+        'duration' => {'type'=>'decimal', 'path'=>'Repeat.duration', 'min'=>0, 'max'=>1},
+        'durationMax' => {'type'=>'decimal', 'path'=>'Repeat.durationMax', 'min'=>0, 'max'=>1},
+        'durationUnit' => {'valid_codes'=>{'http://unitsofmeasure.org'=>['s', 'min', 'h', 'd', 'wk', 'mo', 'a']}, 'type'=>'code', 'path'=>'Repeat.durationUnit', 'min'=>0, 'max'=>1, 'binding'=>{'strength'=>'required', 'uri'=>'http://hl7.org/fhir/ValueSet/units-of-time'}},
+        'frequency' => {'type'=>'integer', 'path'=>'Repeat.frequency', 'min'=>0, 'max'=>1},
+        'frequencyMax' => {'type'=>'integer', 'path'=>'Repeat.frequencyMax', 'min'=>0, 'max'=>1},
+        'period' => {'type'=>'decimal', 'path'=>'Repeat.period', 'min'=>0, 'max'=>1},
+        'periodMax' => {'type'=>'decimal', 'path'=>'Repeat.periodMax', 'min'=>0, 'max'=>1},
+        'periodUnit' => {'valid_codes'=>{'http://unitsofmeasure.org'=>['s', 'min', 'h', 'd', 'wk', 'mo', 'a']}, 'type'=>'code', 'path'=>'Repeat.periodUnit', 'min'=>0, 'max'=>1, 'binding'=>{'strength'=>'required', 'uri'=>'http://hl7.org/fhir/ValueSet/units-of-time'}},
+        'when' => {'valid_codes'=>{'http://hl7.org/fhir/v3/TimingEvent'=>['HS', 'WAKE', 'C', 'CM', 'CD', 'CV', 'AC', 'ACM', 'ACD', 'ACV', 'PC', 'PCM', 'PCD', 'PCV']}, 'type'=>'code', 'path'=>'Repeat.when', 'min'=>0, 'max'=>1, 'binding'=>{'strength'=>'required', 'uri'=>'http://hl7.org/fhir/ValueSet/event-timing'}},
+        'offset' => {'type'=>'unsignedInt', 'path'=>'Repeat.offset', 'min'=>0, 'max'=>1}
+      }
+
+      attr_accessor :id             # 0-1 id
+      attr_accessor :extension      # 0-* [ Extension ]
+      attr_accessor :boundsQuantity # 0-1 Quantity
+      attr_accessor :boundsRange    # 0-1 Range
+      attr_accessor :boundsPeriod   # 0-1 Period
+      attr_accessor :count          # 0-1 integer
+      attr_accessor :countMax       # 0-1 integer
+      attr_accessor :duration       # 0-1 decimal
+      attr_accessor :durationMax    # 0-1 decimal
+      attr_accessor :durationUnit   # 0-1 code
+      attr_accessor :frequency      # 0-1 integer
+      attr_accessor :frequencyMax   # 0-1 integer
+      attr_accessor :period         # 0-1 decimal
+      attr_accessor :periodMax      # 0-1 decimal
+      attr_accessor :periodUnit     # 0-1 code
+      attr_accessor :when           # 0-1 code
+      attr_accessor :offset         # 0-1 unsignedInt
+    end
+
+    attr_accessor :id        # 0-1 id
+    attr_accessor :extension # 0-* [ Extension ]
+    attr_accessor :event     # 0-* [ dateTime ]
+    attr_accessor :repeat    # 0-1 Timing::Repeat
+    attr_accessor :code      # 0-1 CodeableConcept
+  end
+end

data/lib/fhir/types/TriggerDefinition.rb

@@ -0,0 +1,33 @@
+module FHIR
+  class TriggerDefinition < FHIR::Model
+    include FHIR::Hashable
+    include FHIR::Json
+    include FHIR::Xml
+
+    MULTIPLE_TYPES = {
+      'eventTiming' => ['Timing', 'Reference', 'date', 'dateTime']
+    }
+    SEARCH_PARAMS = []
+    METADATA = {
+      'id' => {'type'=>'id', 'path'=>'TriggerDefinition.id', 'min'=>0, 'max'=>1},
+      'extension' => {'type'=>'Extension', 'path'=>'TriggerDefinition.extension', 'min'=>0, 'max'=>Float::INFINITY},
+      'type' => {'valid_codes'=>{'http://hl7.org/fhir/trigger-type'=>['named-event', 'periodic', 'data-added', 'data-modified', 'data-removed', 'data-accessed', 'data-access-ended']}, 'type'=>'code', 'path'=>'TriggerDefinition.type', 'min'=>1, 'max'=>1, 'binding'=>{'strength'=>'required', 'uri'=>'http://hl7.org/fhir/ValueSet/trigger-type'}},
+      'eventName' => {'type'=>'string', 'path'=>'TriggerDefinition.eventName', 'min'=>0, 'max'=>1},
+      'eventTimingTiming' => {'type'=>'Timing', 'path'=>'TriggerDefinition.eventTiming[x]', 'min'=>0, 'max'=>1},
+      'eventTimingReference' => {'type_profiles'=>['http://hl7.org/fhir/StructureDefinition/Schedule'], 'type'=>'Reference', 'path'=>'TriggerDefinition.eventTiming[x]', 'min'=>0, 'max'=>1},
+      'eventTimingDate' => {'type'=>'date', 'path'=>'TriggerDefinition.eventTiming[x]', 'min'=>0, 'max'=>1},
+      'eventTimingDateTime' => {'type'=>'dateTime', 'path'=>'TriggerDefinition.eventTiming[x]', 'min'=>0, 'max'=>1},
+      'eventData' => {'type'=>'DataRequirement', 'path'=>'TriggerDefinition.eventData', 'min'=>0, 'max'=>1}
+    }
+
+    attr_accessor :id                   # 0-1 id
+    attr_accessor :extension            # 0-* [ Extension ]
+    attr_accessor :type                 # 1-1 code
+    attr_accessor :eventName            # 0-1 string
+    attr_accessor :eventTimingTiming    # 0-1 Timing
+    attr_accessor :eventTimingReference # 0-1 Reference(Schedule)
+    attr_accessor :eventTimingDate      # 0-1 date
+    attr_accessor :eventTimingDateTime  # 0-1 dateTime
+    attr_accessor :eventData            # 0-1 DataRequirement
+  end
+end

data/lib/fhir_models.rb

@@ -29,9 +29,9 @@ require File.join(root, 'lib','fhir.rb')
 
 # Require the generated code
 Dir.glob(File.join(root, 'lib','fhir','*.rb')).each do |file|
-  load file
+  require file
 end
 Dir.glob(File.join(root, 'lib','fhir','**','*.rb')).each do |file|
-  load file
+  require file
 end
 

data/lib/tasks/tasks.rake

@@ -83,6 +83,35 @@ namespace :fhir do
     puts 'Done.'
   end
 
+  desc 'output invariant expressions from definitions'
+  task :invariants, [] do |t, args|
+    # create a generator and load the definitions
+    generator = FHIR::Boot::Generator.new
+    defs = generator.types + generator.resources + generator.extensions + generator.profiles
+    invariants = {}
+    defs.each do |structureDef|
+      structureDef['snapshot']['element'].each do |element|
+        if element['constraint']
+          element['constraint'].each do |constraint|
+            if constraint['expression']
+              invariants[constraint['key']] = { 
+                :path => element['path'],
+                :expression => constraint['expression'],
+                :human => constraint['human']
+              }
+            end
+          end
+        end
+      end
+    end
+    file = File.open('invariants.txt','w:UTF-8')
+    invariants.each do |key,value|
+      file.write "#{key}|#{value[:path]}|#{value[:expression]}|#{value[:human]}\n"
+    end
+    file.close
+    puts "Wrote invariants into pipe-delimited file: invariants.txt"
+  end
+
   def copy_artifacts(artifacts,src_folder,dest_folder,verbose=true)
     artifacts.each do |artifact|
       puts "  Copying #{artifact}..." if verbose

metadata

@@ -1,7 +1,7 @@
 --- !ruby/object:Gem::Specification
 name: fhir_models
 version: !ruby/object:Gem::Version
-  version: 0.3.0
+  version: 0.3.1
 platform: ruby
 authors:
 - Jason Walonoski
@@ -10,7 +10,7 @@ authors:
 autorequire: 
 bindir: bin
 cert_chain: []
-date: 2016-05-09 00:00:00.000000000 Z
+date: 2016-06-07 00:00:00.000000000 Z
 dependencies:
 - !ruby/object:Gem::Dependency
   name: pry
@@ -958,6 +958,149 @@ files:
 - lib/bootstrap/template.rb
 - lib/bootstrap/xml.rb
 - lib/fhir.rb
+- lib/fhir/metadata.rb
+- lib/fhir/resources/Account.rb
+- lib/fhir/resources/AllergyIntolerance.rb
+- lib/fhir/resources/Appointment.rb
+- lib/fhir/resources/AppointmentResponse.rb
+- lib/fhir/resources/AuditEvent.rb
+- lib/fhir/resources/Basic.rb
+- lib/fhir/resources/Binary.rb
+- lib/fhir/resources/BodySite.rb
+- lib/fhir/resources/Bundle.rb
+- lib/fhir/resources/CarePlan.rb
+- lib/fhir/resources/CareTeam.rb
+- lib/fhir/resources/Claim.rb
+- lib/fhir/resources/ClaimResponse.rb
+- lib/fhir/resources/ClinicalImpression.rb
+- lib/fhir/resources/CodeSystem.rb
+- lib/fhir/resources/Communication.rb
+- lib/fhir/resources/CommunicationRequest.rb
+- lib/fhir/resources/CompartmentDefinition.rb
+- lib/fhir/resources/Composition.rb
+- lib/fhir/resources/ConceptMap.rb
+- lib/fhir/resources/Condition.rb
+- lib/fhir/resources/Conformance.rb
+- lib/fhir/resources/Contract.rb
+- lib/fhir/resources/Coverage.rb
+- lib/fhir/resources/DataElement.rb
+- lib/fhir/resources/DecisionSupportRule.rb
+- lib/fhir/resources/DecisionSupportServiceModule.rb
+- lib/fhir/resources/DetectedIssue.rb
+- lib/fhir/resources/Device.rb
+- lib/fhir/resources/DeviceComponent.rb
+- lib/fhir/resources/DeviceMetric.rb
+- lib/fhir/resources/DeviceUseRequest.rb
+- lib/fhir/resources/DeviceUseStatement.rb
+- lib/fhir/resources/DiagnosticOrder.rb
+- lib/fhir/resources/DiagnosticReport.rb
+- lib/fhir/resources/DocumentManifest.rb
+- lib/fhir/resources/DocumentReference.rb
+- lib/fhir/resources/DomainResource.rb
+- lib/fhir/resources/EligibilityRequest.rb
+- lib/fhir/resources/EligibilityResponse.rb
+- lib/fhir/resources/Encounter.rb
+- lib/fhir/resources/EnrollmentRequest.rb
+- lib/fhir/resources/EnrollmentResponse.rb
+- lib/fhir/resources/EpisodeOfCare.rb
+- lib/fhir/resources/ExpansionProfile.rb
+- lib/fhir/resources/ExplanationOfBenefit.rb
+- lib/fhir/resources/FamilyMemberHistory.rb
+- lib/fhir/resources/Flag.rb
+- lib/fhir/resources/Goal.rb
+- lib/fhir/resources/Group.rb
+- lib/fhir/resources/GuidanceResponse.rb
+- lib/fhir/resources/HealthcareService.rb
+- lib/fhir/resources/ImagingExcerpt.rb
+- lib/fhir/resources/ImagingObjectSelection.rb
+- lib/fhir/resources/ImagingStudy.rb
+- lib/fhir/resources/Immunization.rb
+- lib/fhir/resources/ImmunizationRecommendation.rb
+- lib/fhir/resources/ImplementationGuide.rb
+- lib/fhir/resources/Library.rb
+- lib/fhir/resources/Linkage.rb
+- lib/fhir/resources/List.rb
+- lib/fhir/resources/Location.rb
+- lib/fhir/resources/Measure.rb
+- lib/fhir/resources/MeasureReport.rb
+- lib/fhir/resources/Media.rb
+- lib/fhir/resources/Medication.rb
+- lib/fhir/resources/MedicationAdministration.rb
+- lib/fhir/resources/MedicationDispense.rb
+- lib/fhir/resources/MedicationOrder.rb
+- lib/fhir/resources/MedicationStatement.rb
+- lib/fhir/resources/MessageHeader.rb
+- lib/fhir/resources/ModuleDefinition.rb
+- lib/fhir/resources/NamingSystem.rb
+- lib/fhir/resources/NutritionOrder.rb
+- lib/fhir/resources/Observation.rb
+- lib/fhir/resources/OperationDefinition.rb
+- lib/fhir/resources/OperationOutcome.rb
+- lib/fhir/resources/Order.rb
+- lib/fhir/resources/OrderResponse.rb
+- lib/fhir/resources/OrderSet.rb
+- lib/fhir/resources/Organization.rb
+- lib/fhir/resources/Parameters.rb
+- lib/fhir/resources/Patient.rb
+- lib/fhir/resources/PaymentNotice.rb
+- lib/fhir/resources/PaymentReconciliation.rb
+- lib/fhir/resources/Person.rb
+- lib/fhir/resources/Practitioner.rb
+- lib/fhir/resources/PractitionerRole.rb
+- lib/fhir/resources/Procedure.rb
+- lib/fhir/resources/ProcedureRequest.rb
+- lib/fhir/resources/ProcessRequest.rb
+- lib/fhir/resources/ProcessResponse.rb
+- lib/fhir/resources/Protocol.rb
+- lib/fhir/resources/Provenance.rb
+- lib/fhir/resources/Questionnaire.rb
+- lib/fhir/resources/QuestionnaireResponse.rb
+- lib/fhir/resources/ReferralRequest.rb
+- lib/fhir/resources/RelatedPerson.rb
+- lib/fhir/resources/Resource.rb
+- lib/fhir/resources/RiskAssessment.rb
+- lib/fhir/resources/Schedule.rb
+- lib/fhir/resources/SearchParameter.rb
+- lib/fhir/resources/Sequence.rb
+- lib/fhir/resources/Slot.rb
+- lib/fhir/resources/Specimen.rb
+- lib/fhir/resources/StructureDefinition.rb
+- lib/fhir/resources/StructureMap.rb
+- lib/fhir/resources/Subscription.rb
+- lib/fhir/resources/Substance.rb
+- lib/fhir/resources/SupplyDelivery.rb
+- lib/fhir/resources/SupplyRequest.rb
+- lib/fhir/resources/Task.rb
+- lib/fhir/resources/TestScript.rb
+- lib/fhir/resources/ValueSet.rb
+- lib/fhir/resources/VisionPrescription.rb
+- lib/fhir/types/ActionDefinition.rb
+- lib/fhir/types/Address.rb
+- lib/fhir/types/Annotation.rb
+- lib/fhir/types/Attachment.rb
+- lib/fhir/types/BackboneElement.rb
+- lib/fhir/types/CodeableConcept.rb
+- lib/fhir/types/Coding.rb
+- lib/fhir/types/ContactPoint.rb
+- lib/fhir/types/DataRequirement.rb
+- lib/fhir/types/Element.rb
+- lib/fhir/types/ElementDefinition.rb
+- lib/fhir/types/Extension.rb
+- lib/fhir/types/HumanName.rb
+- lib/fhir/types/Identifier.rb
+- lib/fhir/types/Meta.rb
+- lib/fhir/types/ModuleMetadata.rb
+- lib/fhir/types/Narrative.rb
+- lib/fhir/types/ParameterDefinition.rb
+- lib/fhir/types/Period.rb
+- lib/fhir/types/Quantity.rb
+- lib/fhir/types/Range.rb
+- lib/fhir/types/Ratio.rb
+- lib/fhir/types/Reference.rb
+- lib/fhir/types/SampledData.rb
+- lib/fhir/types/Signature.rb
+- lib/fhir/types/Timing.rb
+- lib/fhir/types/TriggerDefinition.rb
 - lib/fhir_models.rb
 - lib/tasks/tasks.rake
 - test/simplecov.rb