fhir_client 1.6.3 → 1.6.7

data/lib/ext/reference.rb

@@ -1,11 +0,0 @@
-module FHIR
-  class Reference
-    def read
-      # TODO: how to follow contained references?
-      type, id = reference.to_s.split("/")
-      return unless [type, id].all?(&:present?)
-      klass = "FHIR::#{type}".constantize
-      klass.read(id, client)
-    end
-  end
-end

data/lib/patch_format.rb

@@ -1,10 +0,0 @@
-module FHIR
-  module Formats
-    class PatchFormat
-
-      PATCH_XML = "application/xml-patch+xml"
-      PATCH_JSON = "application/json-patch+json"
-
-    end
-  end
-end

data/lib/resource_format.rb

@@ -1,13 +0,0 @@
-module FHIR
-  module Formats
-    class ResourceFormat
-
-      RESOURCE_XML = "application/fhir+xml"
-      RESOURCE_JSON = "application/fhir+json"
-
-      RESOURCE_XML_DSTU2 = "application/xml+fhir"
-      RESOURCE_JSON_DSTU2 = "application/json+fhir"
-
-    end
-  end
-end

data/lib/sections/search.rb

@@ -1,53 +0,0 @@
-module FHIR
-  module Sections
-    module Search
-
-      #
-      # Search a set of resources of a given type.
-      #
-      # @param klass The type of resource to be searched.
-      # @param options A hash of options used to construct the search query.
-      # @return FHIR::ClientReply
-      #
-      def search(klass, options={}, format=@default_format)
-        options.merge!({ resource: klass, format: format })
-
-        if options[:search] && options[:search][:flag]
-          reply = post resource_url(options), nil, fhir_headers(options)
-        else
-          reply = get resource_url(options), fhir_headers(options)
-        end
-        # reply = get resource_url(options), fhir_headers(options)
-        reply.resource = parse_reply(klass, format, reply)
-        reply.resource_class = klass
-        reply
-      end
-
-      def search_existing(klass, id, options={}, format=@default_format)
-        options.merge!({ resource: klass, id: id, format: format })
-        #if options[:search][:flag]
-        if options[:search] && options[:search][:flag]
-          reply = post resource_url(options), nil, fhir_headers(options)
-        else
-          reply = get resource_url(options), fhir_headers(options)
-        end
-        reply.resource = parse_reply(klass, format, reply)
-        reply.resource_class = klass
-        reply
-      end
-
-      def search_all(options={}, format=@default_format)
-        options.merge!({ format: format })
-        if options[:search] && options[:search][:flag]
-          reply = post resource_url(options), nil, fhir_headers(options)
-        else
-          reply = get resource_url(options), fhir_headers(options)
-        end
-        reply.resource = parse_reply(nil, format, reply)
-        reply.resource_class = nil
-        reply
-      end
-
-    end
-  end
-end

data/test/fixtures/bundle-example.xml

@@ -1,79 +0,0 @@
-<Bundle xmlns="http://hl7.org/fhir">
-  <id value="example"/>
-  <meta>
-    <versionId value="1"/>
-    <lastUpdated value="2014-08-18T01:43:30Z"/>
-  </meta>
-  <type value="transaction"/>
-  <base value="http://example.com/base"/>
-  <total value="3"/>
-  <link>
-    <relation value="next"/>
-    <url value="https://example.com/base/MedicationOrder?patient=347&amp;searchId=ff15fd40-ff71-4b48-b366-09c
-      706bed9d0&amp;page=2"/>
-    </link>
-    <link>
-      <relation value="self"/>
-      <url value="https://example.com/base/MedicationOrder?patient=347"/>
-    </link>
-    <entry>
-      <status value="update"/>
-      <resource>
-        <MedicationOrder>
-          <id value="3123"/>
-          <meta>
-            <versionId value="1"/>
-            <lastUpdated value="2014-08-16T05:31:17Z"/>
-          </meta>
-          <text>
-            <status value="generated"/>
-            <div xmlns="http://www.w3.org/1999/xhtml"><!-- Snipped for brevity --></div>
-          </text>
-          <status value="active"/>
-          <patient>
-            <reference value="Patient/example"/>
-          </patient>
-          <prescriber>
-            <reference value="Practitioner/example"/>
-          </prescriber>
-
-          <medicationReference>
-            <reference value="Medication/example"/>
-          </medicationReference>
-
-          <dosageInstruction>
-            <timing>
-              <repeat>
-                <frequency value="3"/>
-                <duration value="1"/>
-                <units value="d"/>
-              </repeat>
-            </timing>
-            <route>
-              <coding>
-                <system value="http://snomed.info/sct"/>
-                <code value="394899003"/>
-                <display value="oral administration of treatment"/>
-              </coding>
-            </route>
-            <doseQuantity>
-              <value value="5"/>
-              <units value="ml"/>
-              <system value="http://unitsofmeasure.org"/>
-              <code value="ml"/>
-            </doseQuantity>
-          </dosageInstruction>
-
-          <dispenseRequest>
-            <quantity>
-              <value value="100"/>
-              <units value="ml"/>
-              <system value="http://unitsofmeasure.org"/>
-              <code value="ml"/>
-            </quantity>
-          </dispenseRequest>
-
-        </MedicationOrder>
-      </resource>
-    </entry>
-  </Bundle>

data/test/fixtures/parameters-example.json

@@ -1,18 +0,0 @@
-{
-  "resourceType": "Parameters",
-  "id": "example",
-  "parameter": [
-    {
-      "name": "start",
-      "valueDate": "2010-01-01"
-    },
-    {
-      "name": "end",
-      "resource": {
-        "resourceType": "Binary",
-        "contentType": "text/plain",
-        "content": "VGhpcyBpcyBhIHRlc3QgZXhhbXBsZQ=="
-      }
-    }
-  ]
-}

data/test/fixtures/parameters-example.xml

@@ -1,17 +0,0 @@
-<?xml version="1.0" encoding="UTF-8"?>
-<Parameters xmlns="http://hl7.org/fhir">
-  <id value="example"/>
-  <parameter>
-    <name value="start"/>
-    <valueDate value="2010-01-01"/>
-  </parameter> 
-  <parameter>
-    <name value="end"/>
-    <resource>
-      <Binary>
-        <contentType value="text/plain"/>
-        <content value="VGhpcyBpcyBhIHRlc3QgZXhhbXBsZQ=="/>
-      </Binary>
-    </resource>
-  </parameter> 
-</Parameters>

data/test/test_helper.rb

@@ -1,8 +0,0 @@
-require 'simplecov'
-require_relative '../lib/fhir_client'
-
-require 'pry'
-require 'minitest/autorun'
-require 'bundler/setup'
-require 'test/unit'
-require 'turn'

data/test/unit/basic_test.rb

@@ -1,17 +0,0 @@
-require_relative '../test_helper'
-
-class BasicTest < Test::Unit::TestCase
-
-  TESTING_ENDPOINT = 'http://fhirtest.uhn.ca/baseDstu3'
-
-  def test_client_initialization
-    client = FHIR::Client.new(TESTING_ENDPOINT)
-    assert !client.use_format_param, "Using _format instead of [Accept] headers."
-  end
-
-  def test_conformance
-    client = FHIR::Client.new(TESTING_ENDPOINT)
-    assert !client.conformanceStatement.nil?, "Unable to retrieve conformance statement."
-  end
-
-end

data/test/unit/bundle_test.rb

@@ -1,21 +0,0 @@
-require_relative '../test_helper'
-
-class BundleTest < Test::Unit::TestCase
-
-  def test_example_bundle
-    client = FHIR::Client.new("feed-test")
-    root = File.expand_path '..', File.dirname(File.absolute_path(__FILE__))
-    bundle_xml = File.read(File.join(root, 'fixtures', 'bundle-example.xml'))
-    response = {
-      :code => '200',
-      :headers => {},
-      :body => bundle_xml
-    }
-    clientReply = FHIR::ClientReply.new('feed-test', response)
-
-    bundle = client.parse_reply(FHIR::Bundle, FHIR::Formats::ResourceFormat::RESOURCE_XML, clientReply)
-
-    assert !bundle.nil?, "Failed to parse example Bundle."
-  end
-
-end

data/test/unit/parameters_test.rb

@@ -1,44 +0,0 @@
-require_relative '../test_helper'
-
-class ParametersTest < Test::Unit::TestCase
-# <?xml version="1.0" encoding="UTF-8"?>
-# <Parameters xmlns="http://hl7.org/fhir">
-#   <id value="example"/>
-#   <parameter>
-#     <name value="start"/>
-#     <valueDate value="2010-01-01"/>
-#   </parameter> 
-#   <parameter>
-#     <name value="end"/>
-#     <resource>
-#       <Binary>
-#         <contentType value="text/plain"/>
-#         <content value="VGhpcyBpcyBhIHRlc3QgZXhhbXBsZQ=="/>
-#       </Binary>
-#     </resource>
-#   </parameter> 
-# </Parameters>
-  def test_example_parameters_xml
-    root = File.expand_path '..', File.dirname(File.absolute_path(__FILE__))
-    xml = File.read(File.join(root, 'fixtures', 'parameters-example.xml'))
-    parameters = FHIR::Xml.from_xml(xml)
-    check_params(parameters)
-   end
-
-  def test_example_parameters_json
-    root = File.expand_path '..', File.dirname(File.absolute_path(__FILE__))
-    json = File.read(File.join(root, 'fixtures', 'parameters-example.json'))
-    parameters = FHIR::Json.from_json(json)
-    check_params(parameters)
-  end
-
-  def check_params(parameters)
-    message = "Failed to parse example Parameters."
-    assert parameters.parameter.length==2, message
-    assert parameters.parameter[0].name=='start', message
-    assert parameters.parameter[0].valueDate=='2010-01-01', message
-    assert parameters.parameter[1].name=='end', message
-    assert !parameters.parameter[1].resource.nil? && parameters.parameter[1].resource.class==FHIR::Binary, message
-  end
-
-end