ezgff 0.0.3 → 0.0.4

This diff represents the content of publicly available package versions that have been released to one of the supported registries. The information contained in this diff is provided for informational purposes only and reflects changes between package versions as they appear in their respective public registries.
Files changed (6) hide show
  1. checksums.yaml +4 -4
  2. data/README.md +5 -0
  3. data/lib/ezgff/version.rb +1 -1
  4. metadata +1 -3
  5. data/dev/gff_examples/ApL_HF_liftover_Refseq.gff.gz +0 -0
  6. data/dev/gff_examples/ref_pea_aphid_22Mar2018_4r6ur_top_level.chrNamed.gff3.gz +0 -0
checksums.yaml CHANGED
@@ -1,7 +1,7 @@
1
1
  ---
2
2
  SHA256:
3
- metadata.gz: 41359bae3e4ab808ddb7a5c3ffcca53b7dc5a52d17f95ed1627f536a0f02ad04
4
- data.tar.gz: ae3b7db2d9653c324e8d3e790f179b822be844903a9cce2751fb4b319884e8ae
3
+ metadata.gz: 51e6aed6237e03cb6c724b80b8d996b98cba5ca30ac3780be662dfe7f37cdea4
4
+ data.tar.gz: 34fa0948d5977a024433e729b1ec62a9e1d730e480a887d199dd4c355d9b9881
5
5
  SHA512:
6
- metadata.gz: 1baf7dbed62a3b3630df7b1bd736d0a863c5b8afa34780c643ab9181882fbe94a71d2396753c525bf99f650701d695aadc926e8852f6087fe0e91c67326d5fd5
7
- data.tar.gz: ee79879d506efe68a08582dc39f4c1c9c092c01c86aa2a7a05960c859931df569cab7632d03a2d2e1122301fae8bae00af2b468d5ea067b560602bbab923b2cb
6
+ metadata.gz: c6f9fed05495e20f07d2a1f3a27d42b1311e97176cab86f5f72448ad62a406e54469dac9c653e22af3b24ac174d141691d9d2fdb4d5ca93d4462ac3ac8b3f453
7
+ data.tar.gz: 307f799823514a1968207f8ea2d51c8d6238285b4a2e1045eae1a19699695588cb98024a9dba73700f991d4162f3c26abeedc5c0ecb18e8a8fb870416d64461d
data/README.md CHANGED
@@ -2,12 +2,17 @@
2
2
 
3
3
  ## What is ezgff_alpha
4
4
 
5
+ Utilities for GFF3, the genome annotation format. Useful to explore the gene model features.
6
+
5
7
  ## Pre-requisites
6
8
 
7
9
  * sqlite3
8
10
 
9
11
  ## Install
10
12
 
13
+ ```bash
14
+ gem ezgff
15
+ ```
11
16
 
12
17
  ## Quick start
13
18
 
data/lib/ezgff/version.rb CHANGED
@@ -1,3 +1,3 @@
1
1
  module Ezgff
2
- VERSION = "0.0.3"
2
+ VERSION = "0.0.4"
3
3
  end
metadata CHANGED
@@ -1,7 +1,7 @@
1
1
  --- !ruby/object:Gem::Specification
2
2
  name: ezgff
3
3
  version: !ruby/object:Gem::Version
4
- version: 0.0.3
4
+ version: 0.0.4
5
5
  platform: ruby
6
6
  authors:
7
7
  - Shuji Shigenobu
@@ -83,11 +83,9 @@ files:
83
83
  - bin/build_gff_sqlitedb.rb
84
84
  - bin/build_gff_sqlitedb_keywords.rb
85
85
  - bin/build_gff_tabix.rb
86
- - dev/gff_examples/ApL_HF_liftover_Refseq.gff.gz
87
86
  - dev/gff_examples/ApMT_NC_011594.gb.gff.gz
88
87
  - dev/gff_examples/GCF_000009605.1_ASM960v1_genomic.gff.gz
89
88
  - dev/gff_examples/apisum_part.gff3.gz
90
- - dev/gff_examples/ref_pea_aphid_22Mar2018_4r6ur_top_level.chrNamed.gff3.gz
91
89
  - exe/ezgff
92
90
  - ezgff.gemspec
93
91
  - lib/ezgff.rb